A Screen for X-Linked Mutations Affecting Drosophila Photoreceptor Differentiation Identifies Casein Kinase 1A As an Essential Negative Regulator of Wingless Signaling
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Casein Kinase 1 Isoforms in Degenerative Disorders
CASEIN KINASE 1 ISOFORMS IN DEGENERATIVE DISORDERS DISSERTATION Presented in Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy in the Graduate School of The Ohio State University By Theresa Joseph Kannanayakal, M.Sc., M.S. * * * * * The Ohio State University 2004 Dissertation Committee: Approved by Professor Jeff A. Kuret, Adviser Professor John D. Oberdick Professor Dale D. Vandre Adviser Professor Mike X. Zhu Biophysics Graduate Program ABSTRACT Casein Kinase 1 (CK1) enzyme is one of the largest family of Serine/Threonine protein kinases. CK1 has a wide distribution spanning many eukaryotic families. In cells, its kinase activity has been found in various sub-cellular compartments enabling it to phosphorylate many proteins involved in cellular maintenance and disease pathogenesis. Tau is one such substrate whose hyperphosphorylation results in degeneration of neurons in Alzheimer’s disease (AD). AD is a slow neuroprogessive disorder histopathologically characterized by Granulovacuolar degeneration bodies (GVBs) and intraneuronal accumulation of tau in Neurofibrillary Tangles (NFTs). The level of CK1 isoforms, CK1α, CK1δ and CK1ε has been shown to be elevated in AD. Previous studies of the correlation of CK1δ with lesions had demonstrated its importance in tau hyperphosphorylation. Hence we investigated distribution of CK1α and CK1ε with the lesions to understand if they would play role in tau hyperphosphorylation similar to CK1δ. The kinase results were also compared with lesion correlation studies of peptidyl cis/trans prolyl isomerase (Pin1) and caspase-3. Our results showed that among the enzymes investigated, CK1 isoforms have the greatest extent of colocalization with the lesions. We have also investigated the distribution of CK1α with different stages of NFTs that follow AD progression. -
Protein Kinases Phosphorylation/Dephosphorylation Protein Phosphorylation Is One of the Most Important Mechanisms of Cellular Re
Protein Kinases Phosphorylation/dephosphorylation Protein phosphorylation is one of the most important mechanisms of cellular responses to growth, stress metabolic and hormonal environmental changes. Most mammalian protein kinases have highly a homologous 30 to 32 kDa catalytic domain. • Most common method of reversible modification - activation and localization • Up to 1/3 of cellular proteins can be phosphorylated • Leads to a very fast response to cellular stress, hormonal changes, learning processes, transcription regulation .... • Different than allosteric or Michealis Menten regulation Protein Kinome To date – 518 human kinases known • 50 kinase families between yeast, invertebrate and mammaliane kinomes • 518 human PKs, most (478) belong to single super family whose catalytic domain are homologous. • Kinase dendrogram displays relative similarities based on catalytic domains. • AGC (PKA, PKG, PKC) • CAMK (Casein kinase 1) • CMGC (CDC, MAPK, GSK3, CLK) • STE (Sterile 7, 11 & 20 kinases) • TK (Tryosine kinases memb and cyto) • TKL (Tyrosine kinase-like) • Phosphorylation stabilized thermodynamically - only half available energy used in adding phosphoryl to protein - change in free energy forces phosphorylation reaction in one direction • Phosphatases reverse direction • The rate of reaction of most phosphatases are 1000 times faster • Phosphorylation occurs on Ser/The or Tyr • What differences occur due to the addition of a phosphoryl group? • Regulation of protein phosphorylation varies depending on protein - some turned on or off -
Supplementary Table 1. in Vitro Side Effect Profiling Study for LDN/OSU-0212320. Neurotransmitter Related Steroids
Supplementary Table 1. In vitro side effect profiling study for LDN/OSU-0212320. Percent Inhibition Receptor 10 µM Neurotransmitter Related Adenosine, Non-selective 7.29% Adrenergic, Alpha 1, Non-selective 24.98% Adrenergic, Alpha 2, Non-selective 27.18% Adrenergic, Beta, Non-selective -20.94% Dopamine Transporter 8.69% Dopamine, D1 (h) 8.48% Dopamine, D2s (h) 4.06% GABA A, Agonist Site -16.15% GABA A, BDZ, alpha 1 site 12.73% GABA-B 13.60% Glutamate, AMPA Site (Ionotropic) 12.06% Glutamate, Kainate Site (Ionotropic) -1.03% Glutamate, NMDA Agonist Site (Ionotropic) 0.12% Glutamate, NMDA, Glycine (Stry-insens Site) 9.84% (Ionotropic) Glycine, Strychnine-sensitive 0.99% Histamine, H1 -5.54% Histamine, H2 16.54% Histamine, H3 4.80% Melatonin, Non-selective -5.54% Muscarinic, M1 (hr) -1.88% Muscarinic, M2 (h) 0.82% Muscarinic, Non-selective, Central 29.04% Muscarinic, Non-selective, Peripheral 0.29% Nicotinic, Neuronal (-BnTx insensitive) 7.85% Norepinephrine Transporter 2.87% Opioid, Non-selective -0.09% Opioid, Orphanin, ORL1 (h) 11.55% Serotonin Transporter -3.02% Serotonin, Non-selective 26.33% Sigma, Non-Selective 10.19% Steroids Estrogen 11.16% 1 Percent Inhibition Receptor 10 µM Testosterone (cytosolic) (h) 12.50% Ion Channels Calcium Channel, Type L (Dihydropyridine Site) 43.18% Calcium Channel, Type N 4.15% Potassium Channel, ATP-Sensitive -4.05% Potassium Channel, Ca2+ Act., VI 17.80% Potassium Channel, I(Kr) (hERG) (h) -6.44% Sodium, Site 2 -0.39% Second Messengers Nitric Oxide, NOS (Neuronal-Binding) -17.09% Prostaglandins Leukotriene, -
The Role of Casein Kinase 1 in Meiosis
e & Ch m rom ro o d s n o y m S Zhao and Liang, J Down Syndr Chr Abnorm 2016, 2:1 e n A Journal of Down Syndrome & w b o n DOI: 10.4172/2472-1115.1000106 D o f r m o l ISSN: 2472-1115a a l i n t r i e u s o J Chromosome Abnormalities Review Article Open Access The Role of Casein Kinase 1 in Meiosis Yue-Fang Zhao and Cheng-Guang Liang* The Key Laboratory of National Education Ministry for Mammalian Reproductive Biology and Biotechnology, The Research Center for Laboratory Animal Science, College of Life Science, Inner Mongolia University, Hohhot, Inner Mongolia, People’s Republic of China Abstract The casein kinase 1 (CK1) belongs to the serine/threonine protein kinases. CK1 members, which commonly exist in all eukaryotes, are involved in the regulation of many cellular processes linked to cell cycle progression, spindle- dynamics, and chromosome segregation. Additionally, CK1 regulate key signaling pathways such as Wnt (Wingless/ Int-1), Hh (Hedgehog), and Hippo, known to be critically involved in tumor progression. Considering the importance of CK1 for accurate cell division and regulation of tumor suppressor functions, it is not surprising scientific effort has enormously increased. In mammals, CK1 regulate the transition from interphase to metaphase in mitosis. In budding yeast and fission yeast, CK1 phosphorylate Rec8 subunits of cohesin complex and regulate chromosome segregation in meiosis. During meiosis, two rounds of chromosome segregation after a single round of DNA replication produce haploid gametes from diploid precursors. Any mistake in chromosome segregation may result in aneuploidy, which in meiosis are one of the main causes of infertility, abortion and many genetic diseases in humans. -
Mapping Proteome-Wide Targets of Protein Kinases in Plant Stress Responses
Mapping proteome-wide targets of protein kinases in plant stress responses Pengcheng Wanga,1,2, Chuan-Chih Hsub,1, Yanyan Dua,b,1, Peipei Zhuc, Chunzhao Zhaoa,d, Xing Fua, Chunguang Zhangd, Juan Sebastian Paezb, Alberto P. Machoa, W. Andy Taob,c,2, and Jian-Kang Zhua,b,d,2 aShanghai Center for Plant Stress Biology, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, 200032 Shanghai, China; bDepartment of Biochemistry, Purdue University, West Lafayette, IN 47907; cDepartment of Chemistry, Purdue University, West Lafayette, IN 47907; and dDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN 47907 Contributed by Jian-Kang Zhu, December 13, 2019 (sent for review November 13, 2019; reviewed by Heribert Hirt and Shuqun Zhang) Protein kinases are major regulatory components in almost all (SNF1)-related protein kinase 2s (SnRK2s) are central compo- cellular processes in eukaryotic cells. By adding phosphate groups, nents in plant responses to drought and osmotic stresses. There protein kinases regulate the activity, localization, protein–protein are 10 members in the SnRK2 family in Arabidopsis (SnRK2.1 to interactions, and other features of their target proteins. It is known SnRK2.10) and rice (SAPK1 to SAPK10). In Arabidopsis, three of that protein kinases are central components in plant responses to them, SnRK2.2, SnRK2.3, and SnRK2.6, are activated by abscisic environmental stresses such as drought, high salinity, cold, and acid (ABA), a phytohormone important for plant responses to pathogen attack. However, only a few targets of these protein ki- several abiotic stresses (9), and play critical roles in ABA re- nases have been identified. -
Necroptosis Molecular Mechanisms: Recent findings Regarding Novel Necroptosis Regulators Jinho Seo1,Youngwoonam2, Seongmi Kim2,Doo-Byoungoh1,3 and Jaewhan Song 2
Seo et al. Experimental & Molecular Medicine (2021) 53:1007–1017 https://doi.org/10.1038/s12276-021-00634-7 Experimental & Molecular Medicine REVIEW ARTICLE Open Access Necroptosis molecular mechanisms: Recent findings regarding novel necroptosis regulators Jinho Seo1,YoungWooNam2, Seongmi Kim2,Doo-ByoungOh1,3 and Jaewhan Song 2 Abstract Necroptosis is a form of programmed necrosis that is mediated by various cytokines and pattern recognition receptors (PRRs). Cells dying by necroptosis show necrotic phenotypes, including swelling and membrane rupture, and release damage-associated molecular patterns (DAMPs), inflammatory cytokines, and chemokines, thereby mediating extreme inflammatory responses. Studies on gene knockout or necroptosis-specific inhibitor treatment in animal models have provided extensive evidence regarding the important roles of necroptosis in inflammatory diseases. The necroptosis signaling pathway is primarily modulated by activation of receptor-interacting protein kinase 3 (RIPK3), which phosphorylates mixed-lineage kinase domain-like protein (MLKL), mediating MLKL oligomerization. In the necroptosis process, these proteins are fine-tuned by posttranslational regulation via phosphorylation, ubiquitination, glycosylation, and protein–protein interactions. Herein, we review recent findings on the molecular regulatory mechanisms of necroptosis. Introduction stimuli, such as physical, mechanical, and chemical stres- 1 1234567890():,; 1234567890():,; 1234567890():,; 1234567890():,; Cell death is a terminal physiological event and is ses, prompt necrosis, which is representative of an ACD . intricately related to the maintenance of homeostasis in Cells dying by necrosis, which is not regulated by signaling multicellular organisms. Cell death can be classified into pathways, exhibit swelling, membrane rupture, and two modes: regulated cell death (RCD) and accidental cell secretion of cellular contents1. Apoptosis has been regar- death (ACD). -
Wnt/ß-Catenin and MAPK Signaling
PERSPECTIVE CANCER Because the Wnt/β-catenin signaling pathway is oncogenic in most cancers, yet Wnt/-Catenin and MAPK Signaling: anti-oncogenic and a marker for good prog- nosis in melanoma, Biechele and colleagues Allies and Enemies in Different (7) searched for previously unknown regula- tors of Wnt/β-catenin signaling in melano- Battlefi elds ma. They used an RNA interference–based genetic screen for protein kinases, whose si- Daniele Guardavaccaro and Hans Clevers* lencing synergized with Wnt in stimulating β-catenin transcriptional activity in a hu- Two papers published in Science Signaling reveal extensive crosstalk between Wnt/-catenin and mitogen-activated protein kinase (MAPK) signaling in cancer. man melanoma cell line. Using this screen, Although both studies describe previously unknown links between these two they unexpectedly found that silencing of signaling pathways, the relationship between Wnt/-catenin and MAPK signaling BRAF enhanced β-catenin activity in the depends on the specifi c cellular context. Indeed, in melanoma, hyperactivated presence of Wnt. This fi nding is particularly MAPK signaling down-regulates the Wnt/-catenin signal transduction cascade, interesting because oncogenic mutations in thereby establishing a negative crosstalk between the two signaling pathways. BRAF occur in about 60% of human mela- In contrast, in colorectal cancer, stimulation of the Wnt/-catenin pathway leads nomas (8–10). The most frequent BRAF to activation of the MAPK pathway through Ras stabilization, representing an mutation in melanoma is Val600 → Glu (V600E). BRAF(V600E) induces cell prolif- example of positive crosstalk. Moreover, activation of Wnt/-catenin signaling Downloaded from has context-dependent functions that trigger opposing effects on tumor growth. -
Report Planar Polarity Is Positively Regulated by Casein Kinase I3 in Drosophila
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Current Biology 16, 1329–1336, July 11, 2006 ª2006 Elsevier Ltd All rights reserved DOI 10.1016/j.cub.2006.04.041 Report Planar Polarity Is Positively Regulated by Casein Kinase I3 in Drosophila Helen Strutt,1 Mary Ann Price,1 and David Strutt1,* ommatidia are mispolarized (Figure 1B). The 5B2.6 mu- 1 Centre for Developmental and Biomedical Genetics tation enhances this phenotype to 30% polarity defects Department of Biomedical Science (Figure 1C), while loss of one copy of dsh enhances it to University of Sheffield 41% (Figure 1D) [10]. Western Bank Recombination and deficiency mapping localized the Sheffield S10 2TN lethal mutation on the 5B2.6 chromosome to a 280 kb re- United Kingdom gion at the distal tip of chromosome 3R (Figure S1Ain the Supplemental Data available with this article online). This domain is predicted to contain 22 genes, of which Summary the most likely candidate was the fly CKI3 homolog dco [11, 12]. The identity of 5B2.6 was confirmed by its Members of the casein kinase I (CKI) family have been failure to complement existing dco alleles, resulting in implicated in regulating canonical Wnt/Wingless (Wg) lethality or in viable adults with broad wings and wing signaling by phosphorylating multiple pathway com- vein defects as previously described (Figure 1E) [12]. Se- ponents [1, 2]. Overexpression of CKI in vertebrate quencing of the dco gene in the 5B2.6 mutant identified embryos activates Wg signaling [3, 4], and one target a single amino acid change in a highly conserved argi- is thought to be the cytoplasmic effector Dishevelled nine residue (R192H, Figure S1B). -
The Role of GSK-3 in the Regulation of Protein Turnover, Myosin
International Journal of Molecular Sciences Review The Role of GSK-3β in the Regulation of Protein Turnover, Myosin Phenotype, and Oxidative Capacity in Skeletal Muscle under Disuse Conditions Timur M. Mirzoev * , Kristina A. Sharlo and Boris S. Shenkman Myology Laboratory, Institute of Biomedical Problems RAS, 123007 Moscow, Russia; [email protected] (K.A.S.); [email protected] (B.S.S.) * Correspondence: [email protected] Abstract: Skeletal muscles, being one of the most abundant tissues in the body, are involved in many vital processes, such as locomotion, posture maintenance, respiration, glucose homeostasis, etc. Hence, the maintenance of skeletal muscle mass is crucial for overall health, prevention of various diseases, and contributes to an individual’s quality of life. Prolonged muscle inactivity/disuse (due to limb immobilization, mechanical ventilation, bedrest, spaceflight) represents one of the typical causes, leading to the loss of muscle mass and function. This disuse-induced muscle loss primarily results from repressed protein synthesis and increased proteolysis. Further, prolonged disuse results in slow-to-fast fiber-type transition, mitochondrial dysfunction and reduced oxidative capacity. Glycogen synthase kinase 3β (GSK-3β) is a key enzyme standing at the crossroads of various signaling pathways regulating a wide range of cellular processes. This review discusses various important roles of GSK-3β in the regulation of protein turnover, myosin phenotype, and oxidative capacity in skeletal muscles under disuse/unloading conditions and subsequent recovery. According Citation: Mirzoev, T.M.; Sharlo, K.A.; to its vital functions, GSK-3β may represent a perspective therapeutic target in the treatment of Shenkman, B.S. The Role of GSK-3β muscle wasting induced by chronic disuse, aging, and a number of diseases. -
Structural and Mechanistic Insights Into RAF Kinase Regulation by the KSR/CNK/HYP Complex
Structural and mechanistic insights into RAF kinase regulation by the KSR/CNK/HYP complex by Thanashan Rajakulendran A thesis submitted in conformity with the requirements for the degree of Doctor of Philosophy Department of Molecular Genetics University of Toronto © Copyright by Thanashan Rajakulendran, 2011 Structural and mechanistic insights into RAF kinase regulation by the KSR/CNK/HYP complex Thanashan Rajakulendran Doctor of Philosophy Department of Molecular Genetics University of Toronto 2011 Abstract The RAS/RAF/MEK/ERK pathway is the prototypical cellular signal transduction cascade and has been the focus of intense scrutiny over the last two decades. As a mitogenic pathway, its activation is a potent driver of cellular growth and survival, and its deregulation underlies many cancers. While RAS family GTPases have long been recognized as prolific human oncogenes, a landmark study in 2002 also established the RAF family kinase as a bona fide oncogene (Davies et al., 2002). Indeed, aberrant RAS-RAF signaling underlies nearly one-third of all human cancers (Wellbrock et al., 2004). Notably, mutations in RAF are found with astounding frequency in certain cancers (e.g. 70% of malignant melanomas) (Dhomen and Marais, 2007). These findings have identified intercepting aberrant RAF function as an ideal therapeutic target. RAF is a Ser/Thr protein kinase and its activity is strictly regulated by a core complex of at least three proteins, namely, KSR, CNK and HYP (Claperon and Therrien, 2007). The mechanism by which the KSR/CNK/HYP complex regulates RAF function remains enigmatic. In particular, the function of KSR in regulating RAF activity is highly controversial. -
Casein Kinase-2 Mediates Cell Survival Through Phosphorylation and Degradation of Inositol Hexakisphosphate Kinase-2
Casein kinase-2 mediates cell survival through phosphorylation and degradation of inositol hexakisphosphate kinase-2 Anutosh Chakrabortya,1, J. Kent Werner, Jr.a,1, Michael A. Koldobskiya, Asif K. Mustafaa, Krishna R. Juluria, Joseph Pietropaolia, Adele M. Snowmana, and Solomon H. Snydera,b,c,2 aThe Solomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD 21205; bDepartment of Psychiatry and Behavioral Sciences, Johns Hopkins University School of Medicine, Baltimore, MD 21205; and cDepartment of Pharmacology and Molecular Sciences, Johns Hopkins University School of Medicine, Baltimore, MD 21205 Contributed by Solomon H. Snyder, December 23, 2010 (sent for review November 12, 2010) The inositol pyrophosphate, diphosphoinositol pentakisphosphate, leading to augmentation of the cell death genetic program appar- regulates p53 and protein kinase Akt signaling, and its aberrant ently by default. increase in cells has been implicated in apoptosis and insulin resis- Heretofore posttranslational modifications of IP6K2 have not tance. Inositol hexakisphosphate kinase-2 (IP6K2), one of the major been characterized. We chose to examine phosphorylation of inositol pyrophosphate synthesizing enzymes, mediates p53-linked IP6K2 by casein kinase-2 (CK2) for the following reasons. IP6K2 apoptotic cell death. Casein kinase-2 (CK2) promotes cell survival possesses a proline (P), glutamic acid (E), serine (S), and threo- and is upregulated in tumors. We show that CK2 mediated cell nine (T) (PEST) sequence whose phosphorylation typically facil- survival involves IP6K2 destabilization. CK2 physiologically phos- itates protein degradation (16). The PEST sequence in IP6K2 phorylates IP6K2 at amino acid residues S347 and S356 contained contains a consensus for CK2 phosphorylation. -
Original Article Aberrant Expression of Casein Kinase 1Δ (Ck1δ) in Cervical Squamous Cell Carcinoma
Int J Clin Exp Pathol 2017;10(2):2018-2023 www.ijcep.com /ISSN:1936-2625/IJCEP0045997 Original Article Aberrant expression of casein kinase 1δ (CK1δ) in cervical squamous cell carcinoma Yun-Na Qin1, De-Ming He1, Zi-Yu Zhang2, Xiao-Hong Yu1 1Department of Pathology, Jiangxi Provincial Maternal and Child Health Hospital, Nanchang, Jiangxi, P. R. China; 2Key Laboratory of Women’s Reproductive Health of Jiangxi, Jiangxi Provincial Maternal and Child Health Hospital, Nanchang, Jiangxi, P. R. China Received December 6, 2016; Accepted December 25, 2016; Epub February 1, 2017; Published February 15, 2017 Abstract: Cervical cancer is one of the most common gynecological carcinoma, which seriously threaten the life and health of women globally. Previous studies have shown that β-catenin abnormalities in the expression and localiza- tion is closely related to the the pathogenesis and development of cervical cancer. In the Wnt/β-catenin signaling pathway, casein kinase 1 (CK1) protein family had both inhibitory and activated functions. As one of the seven isoforms of the CK1 family, CK1δ function is poorly defined. Here, by using tissue microarray, we found that, com- pared with control (chronic cervicitis tissue), CK1δ protein expression level was significantly elevated in 88 cervical squamous cell carcinoma (CSCC) tissues (7.7% vs. 58.0%, P<0.001). The increased CK1δ expression was associ- ated with deep cervical stromal invasion in patients with cervical cancer (P=0.015). Besides, the expression levels of CK1δ and β-catenin in cervical cancer tissues was positively correlated in CSCC tissues (P<0.001). Therefore, we hypothesized that CK1δ overexpression may contribute to cervical cancer progression through activating the Wnt/β- catenin signaling pathway.