<I>Pseudoplectania Lignicola</I> Sp. Nov. Described from Central Europe
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Chorioactidaceae: a New Family in the Pezizales (Ascomycota) with Four Genera
mycological research 112 (2008) 513–527 journal homepage: www.elsevier.com/locate/mycres Chorioactidaceae: a new family in the Pezizales (Ascomycota) with four genera Donald H. PFISTER*, Caroline SLATER, Karen HANSENy Harvard University Herbaria – Farlow Herbarium of Cryptogamic Botany, Department of Organismic and Evolutionary Biology, Harvard University, 22 Divinity Avenue, Cambridge, MA 02138, USA article info abstract Article history: Molecular phylogenetic and comparative morphological studies provide evidence for the Received 15 June 2007 recognition of a new family, Chorioactidaceae, in the Pezizales. Four genera are placed in Received in revised form the family: Chorioactis, Desmazierella, Neournula, and Wolfina. Based on parsimony, like- 1 November 2007 lihood, and Bayesian analyses of LSU, SSU, and RPB2 sequence data, Chorioactidaceae repre- Accepted 29 November 2007 sents a sister clade to the Sarcosomataceae, to which some of these taxa were previously Corresponding Editor: referred. Morphologically these genera are similar in pigmentation, excipular construction, H. Thorsten Lumbsch and asci, which mostly have terminal opercula and rounded, sometimes forked, bases without croziers. Ascospores have cyanophilic walls or cyanophilic surface ornamentation Keywords: in the form of ridges or warts. So far as is known the ascospores and the cells of the LSU paraphyses of all species are multinucleate. The six species recognized in these four genera RPB2 all have limited geographical distributions in the northern hemisphere. Sarcoscyphaceae ª 2007 The British Mycological Society. Published by Elsevier Ltd. All rights reserved. Sarcosomataceae SSU Introduction indicated a relationship of these taxa to the Sarcosomataceae and discussed the group as the Chorioactis clade. Only six spe- The Pezizales, operculate cup-fungi, have been put on rela- cies are assigned to these genera, most of which are infre- tively stable phylogenetic footing as summarized by Hansen quently collected. -
Appendix K. Survey and Manage Species Persistence Evaluation
Appendix K. Survey and Manage Species Persistence Evaluation Establishment of the 95-foot wide construction corridor and TEWAs would likely remove individuals of H. caeruleus and modify microclimate conditions around individuals that are not removed. The removal of forests and host trees and disturbance to soil could negatively affect H. caeruleus in adjacent areas by removing its habitat, disturbing the roots of host trees, and affecting its mycorrhizal association with the trees, potentially affecting site persistence. Restored portions of the corridor and TEWAs would be dominated by early seral vegetation for approximately 30 years, which would result in long-term changes to habitat conditions. A 30-foot wide portion of the corridor would be maintained in low-growing vegetation for pipeline maintenance and would not provide habitat for the species during the life of the project. Hygrophorus caeruleus is not likely to persist at one of the sites in the project area because of the extent of impacts and the proximity of the recorded observation to the corridor. Hygrophorus caeruleus is likely to persist at the remaining three sites in the project area (MP 168.8 and MP 172.4 (north), and MP 172.5-172.7) because the majority of observations within the sites are more than 90 feet from the corridor, where direct effects are not anticipated and indirect effects are unlikely. The site at MP 168.8 is in a forested area on an east-facing slope, and a paved road occurs through the southeast part of the site. Four out of five observations are more than 90 feet southwest of the corridor and are not likely to be directly or indirectly affected by the PCGP Project based on the distance from the corridor, extent of forests surrounding the observations, and proximity to an existing open corridor (the road), indicating the species is likely resilient to edge- related effects at the site. -
Pezizales, Pyronemataceae), Is Described from Australia Pamela S
Swainsona 31: 17–26 (2017) © 2017 Board of the Botanic Gardens & State Herbarium (Adelaide, South Australia) A new species of small black disc fungi, Smardaea australis (Pezizales, Pyronemataceae), is described from Australia Pamela S. Catcheside a,b, Samra Qaraghuli b & David E.A. Catcheside b a State Herbarium of South Australia, GPO Box 1047, Adelaide, South Australia 5001 Email: [email protected] b School of Biological Sciences, Flinders University, PO Box 2100, Adelaide, South Australia 5001 Email: [email protected], [email protected] Abstract: A new species, Smardaea australis P.S.Catches. & D.E.A.Catches. (Ascomycota, Pezizales, Pyronemataceae) is described and illustrated. This is the first record of the genus in Australia. The phylogeny of Smardaea and Marcelleina, genera of violaceous-black discomycetes having similar morphological traits, is discussed. Keywords: Fungi, discomycete, Pezizales, Smardaea, Marcelleina, Australia Introduction has dark coloured apothecia and globose ascospores, but differs morphologically from Smardaea in having Small black discomycetes are often difficult or impossible dark hairs on the excipulum. to identify on macro-morphological characters alone. Microscopic examination of receptacle and hymenial Marcelleina and Smardaea tissues has, until the relatively recent use of molecular Four genera of small black discomycetes with purple analysis, been the method of species and genus pigmentation, Greletia Donad., Pulparia P.Karst., determination. Marcelleina and Smardaea, had been separated by characters in part based on distribution of this Between 2001 and 2014 five collections of a small purple pigmentation, as well as on other microscopic black disc fungus with globose spores were made in characters. -
Structural Characterization and Biological Activity of Lactarius Scrobiculatus
Structural characterization and biological activity of Lactarius scrobiculatus Ivana Tomic Thesis for the Master´ degree in Pharmacy 45 study points Department of Pharmaceutical Chemistry School of Pharmacy Faculty of Mathematics and Natural Sciences UNIVERSITY OF OSLO November/2018 II Structural characterization and biological activity of Lactarius scrobiculatus Thesis for Master´ degree in Pharmacy Department for Pharmaceutical chemistry School of Pharmacy Faculty of Mathematics and Natural Sciences University in Oslo Ivana Tomic November 2018 Supervisor: Anne Berit Samuelsen III © Author 2018 Structural characterization and biological activity of Lactarius scrobiculatus Ivana Tomic http://www.duo.uio.no/ Print: Reprosentralen, Universitetet i Oslo IV Acknowledgments The present thesis was carried out at the Departement of Pharmaceutical Chemistry, University of Oslo (UiO), for the Master´s degree in Pharmacy at the University of Oslo. The other institute include Norwegian Centre of Molecular Medicine, where I have performed activity assay. First and foremost, I would like to thank to my supervisor Anne Berit Samuelsen for hers support and guidance throughout my work and useful comments during the writing. Further, I also want to thank Hoai Thi Nguyen and Cristian Winther Wold for help with carrying out GC and GC-MS analysis. Also, I am very thankful to Karl Malterud for help with NMR analysis. Special thanks to Suthajini Yogarajah for her patience and lab support. I would also like to thank to Kari Inngjerdingen for good and helpful Forskningforberedende kurs. My gratitude goes also to Prebens Morth group at NMCC, special to Julia Weikum and Bojana Sredic, who were always kind and helpful. Finally, I would like to express my fabulous thanks to my wonderful parents, my husband and my four sons for their great patience, sacrifice, moral support and encouragement during my master thesis. -
Sarcosenones A–C, Highly Oxygenated Pimarane Diterpenoids from an Endolichenic Fungus Cite This: RSC Adv., 2020, 10,15622 Sarcosomataceae Sp.†
RSC Advances View Article Online PAPER View Journal | View Issue Sarcosenones A–C, highly oxygenated pimarane diterpenoids from an endolichenic fungus Cite this: RSC Adv., 2020, 10,15622 Sarcosomataceae sp.† Xintong Hou,ab Yang Xu,b Shuaiming Zhu,c Yang Zhang, *c Liangdong Guo,d Feng Qiu a and Yongsheng Che*ab Three new highly oxygenated pimarane diterpenoids, sarcosenones A–C(1–3), and the known 9a- Received 17th March 2020 hydroxy-1,8(14),15-isopimaratrien-3,7,11-trione (4), were isolated from cultures of an endolichenic Accepted 6th April 2020 fungus Sarcosomataceae sp. Their structures were elucidated based on NMR spectroscopic data and DOI: 10.1039/d0ra02485f electronic circular dichroism (ECD) calculations. Compound 1 showed moderate cytotoxicity against rsc.li/rsc-advances a small panel of four human tumor cell lines, with IC50 values of 7.5–26.4 mM. nematicidal effect, inhibitory activity of IL-6 signalling medi- Creative Commons Attribution-NonCommercial 3.0 Unported Licence. Introduction ated by SATA3, and cytotoxic activity.15,19 Pimarane diterpenoids have been encountered as secondary Lichens are combinations of a fungus (the mycobiont) and metabolites of higher plants, fungi, and marine organisms.1 an algal partner (the photobiont or phycobiont). In addition to This class of diterpenes can be derived from the original core by fungal mycobionts, some nonobligate microfungi, endolichenic substitution, hydroxylation, acetylation, rearrangement, fungi, are also found to live asymptomatically in the bodies bromination, and ring expansion reactions.2 Since the isolation (thalli) of lichens.23 Endolichenic fungi have been demonstrated of pimaric acid, the rst example of this class, in 1839,3 to be a rich source of new bioactive natural products.24 During pimarane diterpenoids have attracted considerable interest due our continuous search for new cytotoxic metabolites from the 23,25–27 This article is licensed under a to their remarkable structural diversity and great antimalarial,4 endolichenic fungi, the fungus Sarcosomataceae sp. -
Funghi Campania
Università degli Studi di Napoli “Federico II” Dipartimento di Arboricoltura, Botanica e Patologia vegetale I funghi della Campania Emmanuele Roca, Lello Capano, Fabrizio Marziano Coordinamento editoriale: Michele Bianco, Italo Santangelo Progetto grafico: Maurizio Cinque, Pasquale Ascione Testi: Emmanuele Roca, Lello Capano, Fabrizio Marziano Coordinamento fotografico: Lello Capano Collaborazione: Gennaro Casato Segreteria: Maria Raffaela Rizzo Iniziativa assunta nell’ambito del Progetto CRAA “Azioni integrate per lo sviluppo razionale della funghicol- tura in Campania”; Coordinatore scientifico Prof.ssa Marisa Di Matteo. Foto di copertina: Amanita phalloides (Fr.) Link A Umberto Violante (1937-2001) Micologo della Scuola Partenopea I funghi della Campania Indice Presentazione........................................................................................... pag. 7 Prefazione................................................................................................ pag. 9 1 Campania terra di funghi, cercatori e studiosi....................................... pag. 11 2 Elementi di biologia e morfologia.......................................................... pag. 23 3 Principi di classificazione e tecniche di determinazione....................... pag. 39 4 Elenco delle specie presenti in Campania.............................................. pag. 67 5 Schede descrittive delle principali specie.............................................. pag. 89 6 Glossario............................................................................................... -
Micolucus 5 2018
MICOLUCUS • SOCIEDADE MICOLÓXICA LUCUS NÚMERO 5 • ANO 2018 NÚME R O 5•ANO2018 Limiar .............................................................................................. 1 é unha publicación da Sociedade Micolóxica Lucus, Biodiversidade fúnxica da Reserva da Biosfera Terras do Miño: CIF: G27272954 Lentinellus tridentinus. Depósito Legal: LU 140-2014 JOSE CASTRO................................................................................... 2 ISSN edición impresa: 2386-8872 ISSN edición dixital: 2387-1822 Aportaciones al conocimiento de la micobiota de la Sierra de O Courel (Lugo, España): REDACCIÓN E COORDINACIÓN: Donadinia helvelloides JULIÁN ALONSO DÍAZ...................................................................... 9 Julián Alonso Díaz Jose Castro Ferreiro Descripción de cuatro especies interesantes para la Benito Martínez Lobato micoflora de Galicia. Juan Antonio Martínez Fidalgo JOSÉ MANUEL CASTRO MARCOTE, JOSÉ MARÍA COSTA LAGO ..... 19 Alfonso Vázquez Fraga José Manuel Fernández Díaz Hongos hipogeos de la provincia de Lugo: Tuber foetidum. Cristina Gayo Cancelas JOSE CASTRO, JULIÁN ALONSO, ALFONSO VÁZQUEZ ................... 31 Jesús Javier Varela Quintas Howard Fox Fomitopsis iberica, un políporo agente de pudrición marrón. • Os artigos remitidos a SANTIAGO CORRAL ESTÉVEZ, JOSÉ MARÍA COSTA LAGO ............. 38 son revisados por asesores externos antes de ser Estudos sobre a micobiota folícola da Reserva da Biosfera aceptados ou rexeitados. Terras do Miño I: Chloroscypha chloromela. JOSE CASTRO ............................................................................... -
The Phylogeny of Plant and Animal Pathogens in the Ascomycota
Physiological and Molecular Plant Pathology (2001) 59, 165±187 doi:10.1006/pmpp.2001.0355, available online at http://www.idealibrary.com on MINI-REVIEW The phylogeny of plant and animal pathogens in the Ascomycota MARY L. BERBEE* Department of Botany, University of British Columbia, 6270 University Blvd, Vancouver, BC V6T 1Z4, Canada (Accepted for publication August 2001) What makes a fungus pathogenic? In this review, phylogenetic inference is used to speculate on the evolution of plant and animal pathogens in the fungal Phylum Ascomycota. A phylogeny is presented using 297 18S ribosomal DNA sequences from GenBank and it is shown that most known plant pathogens are concentrated in four classes in the Ascomycota. Animal pathogens are also concentrated, but in two ascomycete classes that contain few, if any, plant pathogens. Rather than appearing as a constant character of a class, the ability to cause disease in plants and animals was gained and lost repeatedly. The genes that code for some traits involved in pathogenicity or virulence have been cloned and characterized, and so the evolutionary relationships of a few of the genes for enzymes and toxins known to play roles in diseases were explored. In general, these genes are too narrowly distributed and too recent in origin to explain the broad patterns of origin of pathogens. Co-evolution could potentially be part of an explanation for phylogenetic patterns of pathogenesis. Robust phylogenies not only of the fungi, but also of host plants and animals are becoming available, allowing for critical analysis of the nature of co-evolutionary warfare. Host animals, particularly human hosts have had little obvious eect on fungal evolution and most cases of fungal disease in humans appear to represent an evolutionary dead end for the fungus. -
(With (Otidiaceae). Annellospores, The
PERSOONIA Published by the Rijksherbarium, Leiden Volume Part 6, 4, pp. 405-414 (1972) Imperfect states and the taxonomy of the Pezizales J.W. Paden Department of Biology, University of Victoria Victoria, B. C., Canada (With Plates 20-22) Certainly only a relatively few species of the Pezizales have been studied in culture. I that this will efforts in this direction. hope paper stimulatemore A few patterns are emerging from those species that have been cultured and have produced conidia but more information is needed. Botryoblasto- and found in cultures of spores ( Oedocephalum Ostracoderma) are frequently Peziza and Iodophanus (Pezizaceae). Aleurospores are known in Peziza but also in other like known in genera. Botrytis- imperfect states are Trichophaea (Otidiaceae). Sympodulosporous imperfect states are known in several families (Sarcoscyphaceae, Sarcosomataceae, Aleuriaceae, Morchellaceae) embracing both suborders. Conoplea is definitely tied in with Urnula and Plectania, Nodulosporium with Geopyxis, and Costantinella with Morchella. Certain types of conidia are not presently known in the Pezizales. Phialo- and few other have spores, porospores, annellospores, blastospores a types not been reported. The absence of phialospores is of special interest since these are common in the Helotiales. The absence of conidia in certain e. Helvellaceae and Theleboleaceae also be of groups, g. may significance, and would aid in delimiting these taxa. At the species level critical com- of taxonomic and parison imperfect states may help clarify problems supplement other data in distinguishing between closely related species. Plectania and of where such Peziza, perhaps Sarcoscypha are examples genera studies valuable. might prove One of the Pezizales in need of in culture large group desparate study are the few of these have been cultured. -
Caloscyphaceae, a New Family of the Pezizales
27 Karstenia 42: 27- 28, 2002 Caloscyphaceae, a new family of the Pezizales HARRl HARMAJA HARMAJA, H. 2002: Caloscyphaceae, a new family of the Pezizales. - Karstenia 42: 27- 28 . Helsinki. ISSN 0453-3402. The new family Caloscyphaceae Harmaja is described for Caloscypha Boud. (Asco mycetes, Pezizales). The genus is monotypic, only comprising C. jiilgens (Pers. : Fr.) Boud. Characters belie ed to be diagnostic of the new family are treated, some of them being cited from the literature, others having been studied personally. Key words: ascospore wall , Caloscypha, carotenoids, chemotaxonomy, Geniculoden dron pyriforme, phylogeny, seed parasite Harri Harmaja, Botanical Museum, Finnish Museum ofN atural History, PO. Box 47, FIN-00014 University of Helsinki, Finland www.helsinki.fi/people/harri.hannaja/ The genus Caloscypha Boud., with its only spe void of carotenoid pigments, and the spores are cies C. fulgens (Pers. : Fr.) Boud., has usually multinucleate. The genus clearly deserves a fam been included in the family Pyronemataceae (Pe ily of its own. zizales). However, since a rather long time the Below, the new family Caloscyphaceae is de genus been considered taxonomically isolated scribed. The characters that appear to be diag without having close relatives (see e.g. Korf nostic at the family le el are given in the English 1972). This status was strengthened as the description; these are partly a matter of personal spores of C. fulgens were reported to belong to judgement. Detailed features of the genus Calo an infrequent kind as to their wall structure (Har scypha and its only species have been described maja 1974). As I also observed that the ascus wall e.g. -
A Taxonomic and Phylogenetic Investigation of Conifer Endophytes
A Taxonomic and Phylogenetic Investigation of Conifer Endophytes of Eastern Canada by Joey B. Tanney A thesis submitted to the Faculty of Graduate and Postdoctoral Affairs in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Biology Carleton University Ottawa, Ontario © 2016 Abstract Research interest in endophytic fungi has increased substantially, yet is the current research paradigm capable of addressing fundamental taxonomic questions? More than half of the ca. 30,000 endophyte sequences accessioned into GenBank are unidentified to the family rank and this disparity grows every year. The problems with identifying endophytes are a lack of taxonomically informative morphological characters in vitro and a paucity of relevant DNA reference sequences. A study involving ca. 2,600 Picea endophyte cultures from the Acadian Forest Region in Eastern Canada sought to address these taxonomic issues with a combined approach involving molecular methods, classical taxonomy, and field work. It was hypothesized that foliar endophytes have complex life histories involving saprotrophic reproductive stages associated with the host foliage, alternative host substrates, or alternate hosts. Based on inferences from phylogenetic data, new field collections or herbarium specimens were sought to connect unidentifiable endophytes with identifiable material. Approximately 40 endophytes were connected with identifiable material, which resulted in the description of four novel genera and 21 novel species and substantial progress in endophyte taxonomy. Endophytes were connected with saprotrophs and exhibited reproductive stages on non-foliar tissues or different hosts. These results provide support for the foraging ascomycete hypothesis, postulating that for some fungi endophytism is a secondary life history strategy that facilitates persistence and dispersal in the absence of a primary host. -
Free-Living Protozoa in Drinking Water Supplies: Community Composition and Role As Hosts for Legionella Pneumophila
Free-living protozoa in drinking water supplies: community composition and role as hosts for Legionella pneumophila Rinske Marleen Valster Thesis committee Thesis supervisor Prof. dr. ir. D. van der Kooij Professor of Environmental Microbiology Wageningen University Principal Microbiologist KWR Watercycle Institute, Nieuwegein Thesis co-supervisor Prof. dr. H. Smidt Personal chair at the Laboratory of Microbiology Wageningen University Other members Dr. J. F. Loret, CIRSEE-Suez Environnement, Le Pecq, France Prof. dr. T. A. Stenstrom,¨ SIIDC, Stockholm, Sweden Dr. W. Hoogenboezem, The Water Laboratory, Haarlem Prof. dr. ir. M. H. Zwietering, Wageningen University This research was conducted under the auspices of the Graduate School VLAG. Free-living protozoa in drinking water supplies: community composition and role as hosts for Legionella pneumophila Rinske Marleen Valster Thesis submitted in fulfilment of the requirements for the degree of doctor at Wageningen University by the authority of the Rector Magnificus Prof. dr. M.J. Kropff, in the presence of the Thesis Committee appointed by the Academic Board to be defended in public on Monday 20 June 2011 at 11 a.m. in the Aula Rinske Marleen Valster Free-living protozoa in drinking water supplies: community composition and role as hosts for Legionella pneumophila, viii+186 pages. Thesis, Wageningen University, Wageningen, NL (2011) With references, with summaries in Dutch and English ISBN 978-90-8585-884-3 Abstract Free-living protozoa, which feed on bacteria, play an important role in the communities of microor- ganisms and invertebrates in drinking water supplies and in (warm) tap water installations. Several bacteria, including opportunistic human pathogens such as Legionella pneumophila, are able to sur- vive and replicate within protozoan hosts, and certain free-living protozoa are opportunistic human pathogens as well.