Pezizales, Pyronemataceae), Is Described from Australia Pamela S
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Chorioactidaceae: a New Family in the Pezizales (Ascomycota) with Four Genera
mycological research 112 (2008) 513–527 journal homepage: www.elsevier.com/locate/mycres Chorioactidaceae: a new family in the Pezizales (Ascomycota) with four genera Donald H. PFISTER*, Caroline SLATER, Karen HANSENy Harvard University Herbaria – Farlow Herbarium of Cryptogamic Botany, Department of Organismic and Evolutionary Biology, Harvard University, 22 Divinity Avenue, Cambridge, MA 02138, USA article info abstract Article history: Molecular phylogenetic and comparative morphological studies provide evidence for the Received 15 June 2007 recognition of a new family, Chorioactidaceae, in the Pezizales. Four genera are placed in Received in revised form the family: Chorioactis, Desmazierella, Neournula, and Wolfina. Based on parsimony, like- 1 November 2007 lihood, and Bayesian analyses of LSU, SSU, and RPB2 sequence data, Chorioactidaceae repre- Accepted 29 November 2007 sents a sister clade to the Sarcosomataceae, to which some of these taxa were previously Corresponding Editor: referred. Morphologically these genera are similar in pigmentation, excipular construction, H. Thorsten Lumbsch and asci, which mostly have terminal opercula and rounded, sometimes forked, bases without croziers. Ascospores have cyanophilic walls or cyanophilic surface ornamentation Keywords: in the form of ridges or warts. So far as is known the ascospores and the cells of the LSU paraphyses of all species are multinucleate. The six species recognized in these four genera RPB2 all have limited geographical distributions in the northern hemisphere. Sarcoscyphaceae ª 2007 The British Mycological Society. Published by Elsevier Ltd. All rights reserved. Sarcosomataceae SSU Introduction indicated a relationship of these taxa to the Sarcosomataceae and discussed the group as the Chorioactis clade. Only six spe- The Pezizales, operculate cup-fungi, have been put on rela- cies are assigned to these genera, most of which are infre- tively stable phylogenetic footing as summarized by Hansen quently collected. -
Peziza and Pezizaceae Inferred from Multiple Nuclear Genes: RPB2, -Tubulin, and LSU Rdna
Molecular Phylogenetics and Evolution 36 (2005) 1–23 www.elsevier.com/locate/ympev Evolutionary relationships of the cup-fungus genus Peziza and Pezizaceae inferred from multiple nuclear genes: RPB2, -tubulin, and LSU rDNA Karen Hansen ¤, Katherine F. LoBuglio, Donald H. PWster Harvard University Herbaria, Cambridge, MA 02138, USA Received 5 May 2004; revised 17 December 2004 Available online 22 April 2005 Abstract To provide a robust phylogeny of Pezizaceae, partial sequences from two nuclear protein-coding genes, RPB2 (encoding the sec- ond largest subunit of RNA polymerase II) and -tubulin, were obtained from 69 and 72 specimens, respectively, to analyze with nuclear ribosomal large subunit RNA gene sequences (LSU). The three-gene data set includes 32 species of Peziza, and 27 species from nine additional epigeous and six hypogeous (truZe) pezizaceous genera. Analyses of the combined LSU, RPB2, and -tubulin data set using parsimony, maximum likelihood, and Bayesian approaches identify 14 Wne-scale lineages within Pezizaceae. Species of Peziza occur in eight of the lineages, spread among other genera of the family, conWrming the non-monophyly of the genus. Although parsimony analyses of the three-gene data set produced a nearly completely resolved strict consensus tree, with increased conWdence, relationships between the lineages are still resolved with mostly weak bootstrap support. Bayesian analyses of the three- gene data, however, show support for several more inclusive clades, mostly congruent with Bayesian analyses of RPB2. No strongly supported incongruence was found among phylogenies derived from the separate LSU, RPB2, and -tubulin data sets. The RPB2 region appeared to be the most informative single gene region based on resolution and clade support, and accounts for the greatest number of potentially parsimony informative characters within the combined data set, followed by the LSU and the -tubulin region. -
Macrofungi of Huzurlu High Plateau (Gaziantep-Turkey)
Turk J Bot 33 (2009) 429-437 © TÜBİTAK Research Article doi:10.3906/bot-0902-1 Macrofungi of Huzurlu high plateau (Gaziantep-Turkey) Abdullah KAYA* Adıyaman University, Education Faculty, 02040 Adıyaman - TURKEY Received: 09.02.2009 Accepted: 01.09.2009 Abstract: Macrofungi samples were collected from Huzurlu high plateau and its surroundings between 2002 and 2005. As a result of macroscopic and microscopic investigations 105 taxa belonging to 67 genera and 33 families were recorded in Ascomycetes and Basidiomycetes classes. Six of them, Phaeohelotium umbilicatum (Le Gal) Dennis, Lepiota jacobi Vellinga & Knudsen, Leucoagaricus erioderma (Malençon) Bon, Leucoagaricus serenus (Fr.) Bon & Boiffard, Cortinarius turgidus Fr., and Cotylidia diaphana (Schwein.) Lentz, are new records for the macromycota of Turkey. Key words: Biodiversity, İslahiye, Gaziantep, taxonomy Huzurlu yaylası (İslahiye-Gaziantep) makromantarları Özet: Huzurlu yaylası ve çevresinden 2002-2005 yılları arasında makrofungus örnekleri toplandı. Gerekli makroskobik ve mikroskobik incelemeler sonucunda Ascomycetes ve Basidiomycetes sınıflarına ait 33 familya ve 67 cins içinde yer alan 105 takson belirlendi. Tanımlanan taksonlardan 6 tanesi, Phaeohelotium umbilicatum (Le Gal) Dennis, Lepiota jacobi Vellinga & Knudsen, Leucoagaricus erioderma (Malençon) Bon, Leucoagaricus serenus (Fr.) Bon & Boiffard, Cortinarius turgidus Fr. ve Cotylidia diaphana (Schwein.) Lentz, Türkiye mikotası için yeni kayıttır. Anahtar sözcükler: Biyoçeşitlilik, İslahiye, Gaziantep, taksonomi Introduction Huzurlu high plateau (Figure 1), which was Taxonomic studies on Turkish macromycota declared a “high plateau tourism centre” by the started in the second quarter of the 20th century and Turkish Ministry of Tourism, is situated within the accelerated during the last quarter of the same century boundaries of Gaziantep province at the intersection and are still going on. -
Plant Life MagillS Encyclopedia of Science
MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE Volume 4 Sustainable Forestry–Zygomycetes Indexes Editor Bryan D. Ness, Ph.D. Pacific Union College, Department of Biology Project Editor Christina J. Moose Salem Press, Inc. Pasadena, California Hackensack, New Jersey Editor in Chief: Dawn P. Dawson Managing Editor: Christina J. Moose Photograph Editor: Philip Bader Manuscript Editor: Elizabeth Ferry Slocum Production Editor: Joyce I. Buchea Assistant Editor: Andrea E. Miller Page Design and Graphics: James Hutson Research Supervisor: Jeffry Jensen Layout: William Zimmerman Acquisitions Editor: Mark Rehn Illustrator: Kimberly L. Dawson Kurnizki Copyright © 2003, by Salem Press, Inc. All rights in this book are reserved. No part of this work may be used or reproduced in any manner what- soever or transmitted in any form or by any means, electronic or mechanical, including photocopy,recording, or any information storage and retrieval system, without written permission from the copyright owner except in the case of brief quotations embodied in critical articles and reviews. For information address the publisher, Salem Press, Inc., P.O. Box 50062, Pasadena, California 91115. Some of the updated and revised essays in this work originally appeared in Magill’s Survey of Science: Life Science (1991), Magill’s Survey of Science: Life Science, Supplement (1998), Natural Resources (1998), Encyclopedia of Genetics (1999), Encyclopedia of Environmental Issues (2000), World Geography (2001), and Earth Science (2001). ∞ The paper used in these volumes conforms to the American National Standard for Permanence of Paper for Printed Library Materials, Z39.48-1992 (R1997). Library of Congress Cataloging-in-Publication Data Magill’s encyclopedia of science : plant life / edited by Bryan D. -
Contribution to the Study of Neotropical Discomycetes: a New Species of the Genus Geodina (Geodina Salmonicolor Sp
Mycosphere 9(2): 169–177 (2018) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/9/2/1 Copyright © Guizhou Academy of Agricultural Sciences Contribution to the study of neotropical discomycetes: a new species of the genus Geodina (Geodina salmonicolor sp. nov.) from the Dominican Republic Angelini C1,2, Medardi G3, Alvarado P4 1 Jardín Botánico Nacional Dr. Rafael Ma. Moscoso, Santo Domingo, República Dominicana 2 Via Cappuccini 78/8, 33170 (Pordenone) 3 Via Giuseppe Mazzini 21, I-25086 Rezzato (Brescia) 4 ALVALAB, La Rochela 47, E-39012 Santander, Spain Angelini C, Medardi G, Alvarado P 2018 - Contribution to the study of neotropical discomycetes: a new species of the genus Geodina (Geodina salmonicolor sp. nov.) from the Dominican Republic. Mycosphere 9(2), 169–177, Doi 10.5943/mycosphere/9/2/1 Abstract Geodina salmonicolor sp. nov., a new neotropical / equatorial discomycetes of the genus Geodina, is here described and illustrated. The discovery of this new entity allowed us to propose another species of Geodina, until now a monospecific genus, and produce the first 28S rDNA genetic data, which supports this species is related to genus Wynnea in the Sarcoscyphaceae. Key-words – 1 new species – Ascomycota – Sarcoscyphaceae – Sub-tropical zone Caribbeans – Taxonomy Introduction A study started more than 10 years ago in the area of Santo Domingo (Dominican Republic) by one of the authors allowed us to identify several interesting fungal species, both Basidiomycota and Ascomycota. Angelini & Medardi (2012) published a first report of ascomycetes in which 12 lignicolous species including discomycetes and pyrenomycetes were described and illustrated in detail, also delineating the physical and botanical characteristics of the research area. -
Funghi Campania
Università degli Studi di Napoli “Federico II” Dipartimento di Arboricoltura, Botanica e Patologia vegetale I funghi della Campania Emmanuele Roca, Lello Capano, Fabrizio Marziano Coordinamento editoriale: Michele Bianco, Italo Santangelo Progetto grafico: Maurizio Cinque, Pasquale Ascione Testi: Emmanuele Roca, Lello Capano, Fabrizio Marziano Coordinamento fotografico: Lello Capano Collaborazione: Gennaro Casato Segreteria: Maria Raffaela Rizzo Iniziativa assunta nell’ambito del Progetto CRAA “Azioni integrate per lo sviluppo razionale della funghicol- tura in Campania”; Coordinatore scientifico Prof.ssa Marisa Di Matteo. Foto di copertina: Amanita phalloides (Fr.) Link A Umberto Violante (1937-2001) Micologo della Scuola Partenopea I funghi della Campania Indice Presentazione........................................................................................... pag. 7 Prefazione................................................................................................ pag. 9 1 Campania terra di funghi, cercatori e studiosi....................................... pag. 11 2 Elementi di biologia e morfologia.......................................................... pag. 23 3 Principi di classificazione e tecniche di determinazione....................... pag. 39 4 Elenco delle specie presenti in Campania.............................................. pag. 67 5 Schede descrittive delle principali specie.............................................. pag. 89 6 Glossario............................................................................................... -
Two New Families of the Pezizales: Karstenellaceae and Pseudor Hizinaceae
Two new families of the Pezizales: Karstenellaceae and Pseudor hizinaceae Harr i Harmaja Department of Botany, University of Helsinki, SF-00170 Helsinki, Finland HARMAJA H . 1974: Two new families of the Pezizales: Karstenellaceae and Pseu dorhizinaceae. - Karstenia 14: 109- 112. The author considers especially the sporal, anatomical and cytological characters of the genera Karstenella Harmaja and Pseudorhizina J ach. to warrant the establishment of a new mono typic family for each : Karstenelloceae Harmaja and Pseudorhizinaceae Harmaja. Certain characters relevant to the family level taxonomy have been observed by the author in both genera. Features apparently diagnostic of the family Karstenellaceae are the p re sence of two nuclei in the spores, the lack of a cyanophilic perispore in all stages. of spore development, the simple structure of the excipulum which is exclusively composed of textura intricata, and the subicular characters. The genera of the Pezizales with tetranucleate spores are considered to form three different families on the basis of both sporal and anatomical differences: H elvellaceae Dum., Pseudorhizinaceae and Rhizinaceae Bon. The lack of a cyanophilic perispore in the mature spores and the simple structure and thick-walled hyphae of the excipulum are important distinguishing features of the family Pseudorhizinaceae. Comparisons are given between Pseudorhizinaceae and the two other families. I. Karstenellaceae Harmaja The description of the genus Karstenella valuable publication of 1972 the new tribe Harmaja was based on the new species K. Karstenelleae Korf was established in the vernalis Harmaja described in the same paper subfamily Pyronematoideae of the family (HARMAJA 1969b). Even then I noted that Pyronemataceae Corda. -
9B Taxonomy to Genus
Fungus and Lichen Genera in the NEMF Database Taxonomic hierarchy: phyllum > class (-etes) > order (-ales) > family (-ceae) > genus. Total number of genera in the database: 526 Anamorphic fungi (see p. 4), which are disseminated by propagules not formed from cells where meiosis has occurred, are presently not grouped by class, order, etc. Most propagules can be referred to as "conidia," but some are derived from unspecialized vegetative mycelium. A significant number are correlated with fungal states that produce spores derived from cells where meiosis has, or is assumed to have, occurred. These are, where known, members of the ascomycetes or basidiomycetes. However, in many cases, they are still undescribed, unrecognized or poorly known. (Explanation paraphrased from "Dictionary of the Fungi, 9th Edition.") Principal authority for this taxonomy is the Dictionary of the Fungi and its online database, www.indexfungorum.org. For lichens, see Lecanoromycetes on p. 3. Basidiomycota Aegerita Poria Macrolepiota Grandinia Poronidulus Melanophyllum Agaricomycetes Hyphoderma Postia Amanitaceae Cantharellales Meripilaceae Pycnoporellus Amanita Cantharellaceae Abortiporus Skeletocutis Bolbitiaceae Cantharellus Antrodia Trichaptum Agrocybe Craterellus Grifola Tyromyces Bolbitius Clavulinaceae Meripilus Sistotremataceae Conocybe Clavulina Physisporinus Trechispora Hebeloma Hydnaceae Meruliaceae Sparassidaceae Panaeolina Hydnum Climacodon Sparassis Clavariaceae Polyporales Gloeoporus Steccherinaceae Clavaria Albatrellaceae Hyphodermopsis Antrodiella -
The Phylogeny of Plant and Animal Pathogens in the Ascomycota
Physiological and Molecular Plant Pathology (2001) 59, 165±187 doi:10.1006/pmpp.2001.0355, available online at http://www.idealibrary.com on MINI-REVIEW The phylogeny of plant and animal pathogens in the Ascomycota MARY L. BERBEE* Department of Botany, University of British Columbia, 6270 University Blvd, Vancouver, BC V6T 1Z4, Canada (Accepted for publication August 2001) What makes a fungus pathogenic? In this review, phylogenetic inference is used to speculate on the evolution of plant and animal pathogens in the fungal Phylum Ascomycota. A phylogeny is presented using 297 18S ribosomal DNA sequences from GenBank and it is shown that most known plant pathogens are concentrated in four classes in the Ascomycota. Animal pathogens are also concentrated, but in two ascomycete classes that contain few, if any, plant pathogens. Rather than appearing as a constant character of a class, the ability to cause disease in plants and animals was gained and lost repeatedly. The genes that code for some traits involved in pathogenicity or virulence have been cloned and characterized, and so the evolutionary relationships of a few of the genes for enzymes and toxins known to play roles in diseases were explored. In general, these genes are too narrowly distributed and too recent in origin to explain the broad patterns of origin of pathogens. Co-evolution could potentially be part of an explanation for phylogenetic patterns of pathogenesis. Robust phylogenies not only of the fungi, but also of host plants and animals are becoming available, allowing for critical analysis of the nature of co-evolutionary warfare. Host animals, particularly human hosts have had little obvious eect on fungal evolution and most cases of fungal disease in humans appear to represent an evolutionary dead end for the fungus. -
Contribución Al Estudio De Los Pezizales (Ascomycotina) De Costa Rica
CONTRIBUCIÓN AL ESTUDIO DE LOS PEZIZALES (ASCOMYCOTINA) DE COSTA RICA por 1 F. D. CALONGE , T. ITURRIAGN, M. MATA' & J. CARRANZA' I Real Jardín Botánico, CSIC, Plaza de Murillo 2. E- 280 l4 Madrid, España. e-mail: [email protected] 2 Dpto. Biología de Organismos, Universidad Simón Bolívar, Caracas, Venezuela. e-mail: [email protected] ) INBio, Instituto Nacional de Biodiversidad, A.P. 22-3100, Santo Domingo, Heredia, Costa Rica. e-mail: [email protected] , Escuela de Biología, Universidad de Costa Rica, San José, Costa Rica. e-mail: [email protected] Summary. CALONGE, F. D., T. ITURRIAGA, M. MATA & J. CARRANZA (2003). Contribution to the study ofthe Pezizales (Ascomycotina) ofCosta Rica. Bol. Soco Micol. Madrid 27: 21-32. More than 400 herbarium collections ofPezizales have been observed during the confection ofthis work. As a result ofthis research on the taxonomy, chorology and ecology ofthese fungi, 46 taxa have been identified, and within them the following six species represent new records to Costa Rica: Aurophora dochmia, Glaziella allrantiaca, Gyromitra esculenta, Morchella esculenta, Plectania rhytidia and Winnea gigantea. Key words: Pezizales, taxonomy, chorology, ecology, Central America, Costa Rica. Resumen. CALONGE, F. D., T. ITURRIAGA, M. MATA & J. CARRANZA (2003). Contribución al estudio de los Pezizales (Ascomycotina) de Costa Rica. Bol. Soco Micol. Madrid 27: 21-32. Se han revisado más de 400 colecciones de herbario pertenecientes a los Pezizales, y se ha seguido una investigación de la taxonomía, corología y ecología de los mismos. Como resultado de este tra bajo se han identificado 46 táxones, entre los cuales pensamos que los seis siguientes representan nuevos registros para Costa Rica: Aurophora dochmia, Glaziella aurantiaca, Gyromitra esculenta, Morchella esculenta, Plectania rhytidia y Winnea gigantea. -
(With (Otidiaceae). Annellospores, The
PERSOONIA Published by the Rijksherbarium, Leiden Volume Part 6, 4, pp. 405-414 (1972) Imperfect states and the taxonomy of the Pezizales J.W. Paden Department of Biology, University of Victoria Victoria, B. C., Canada (With Plates 20-22) Certainly only a relatively few species of the Pezizales have been studied in culture. I that this will efforts in this direction. hope paper stimulatemore A few patterns are emerging from those species that have been cultured and have produced conidia but more information is needed. Botryoblasto- and found in cultures of spores ( Oedocephalum Ostracoderma) are frequently Peziza and Iodophanus (Pezizaceae). Aleurospores are known in Peziza but also in other like known in genera. Botrytis- imperfect states are Trichophaea (Otidiaceae). Sympodulosporous imperfect states are known in several families (Sarcoscyphaceae, Sarcosomataceae, Aleuriaceae, Morchellaceae) embracing both suborders. Conoplea is definitely tied in with Urnula and Plectania, Nodulosporium with Geopyxis, and Costantinella with Morchella. Certain types of conidia are not presently known in the Pezizales. Phialo- and few other have spores, porospores, annellospores, blastospores a types not been reported. The absence of phialospores is of special interest since these are common in the Helotiales. The absence of conidia in certain e. Helvellaceae and Theleboleaceae also be of groups, g. may significance, and would aid in delimiting these taxa. At the species level critical com- of taxonomic and parison imperfect states may help clarify problems supplement other data in distinguishing between closely related species. Plectania and of where such Peziza, perhaps Sarcoscypha are examples genera studies valuable. might prove One of the Pezizales in need of in culture large group desparate study are the few of these have been cultured. -
Species of Peziza S. Str. on Water-Soaked Wood with Special Reference to a New Species, P
DOI 10.12905/0380.sydowia68-2016-0173 Species of Peziza s. str. on water-soaked wood with special reference to a new species, P. nordica, from central Norway Donald H. Pfister1, *, Katherine F. LoBuglio1 & Roy Kristiansen2 1 Department of Organismic and Evolutionary Biology, Harvard University Herbaria, 22 Divinity Ave., Cambridge, MA 02138, USA 2 PO Box 32, N-1650 Sellebakk, Norway * e-mail: [email protected] Pfister D.H., LoBuglio K.F. & Kristiansen R. (2016) Species ofPeziza s. str. on water-soaked wood with special reference to a new species, P. nordica, from central Norway. – Sydowia 68: 173–185. Peziza oliviae, P. lohjaoensis, P. montirivicola and a new species from Norway form a well-supported clade within the Peziza s. str. group based on study of the internal transcribed spacer + 5.8S rRNA gene, large subunit rRNA gene and the 6–7 region of the DNA-dependent RNA polymerase II gene. Like P. oliviae and P. montirivicola, the new species, P. nordica, is distinctly stipi- tate and occurs on wood that has been inundated by fresh water. These species also have paraphyses with yellow vacuolar inclu- sions. They fruit early in the season or at high elevations and are presumed to be saprobic. A discussion of application of the name Peziza is given. Keywords: Ascomycota, molecular phylogeny, Pezizales, taxonomy. The present work was begun to determine the Schwein.) Fr., Cudoniella clavus (Alb. & Schwein.) identity of a collection made by one of us (RK) in Dennis and frequently Scutellinia scutellata (L.) August 2014. This large, orange brown to brown, Lambotte.