Supplementary Table S1 List of Antibodies Against Total-, Phospho- and Cleaved-Proteins, with Dilutions Used for RPPA Analysis

Supplementary Table S1 List of antibodies against total-, phospho- and cleaved-proteins, with dilutions used for RPPA analysis.

ANTIBODY COMPANY CAT. # DILUTION 4E-BP1 Cell Signaling 9452 1:200 4E-BP1 (S65) Cell Signaling 9451 1:50 4E-BP1 (T37/46) Cell Signaling 9459 1:100 4E-BP1 (T70) Cell Signaling 9455 1:200 Acetil-CoA Carboxylase (S79) Cell Signaling 3661 1:50 Ack1 (Y284) Cell Signaling 3138 1:50 Ack1 (Y857/858) Cell Signaling 3137 1:100 Adducin (S662) Upstate 06-820 1:100 AKT Cell Signaling 9272 1:2000 AKT (S473) Cell Signaling 9271 1:100 AKT (T308) Cell Signaling 9275 1:100 ALK (Y1586) Cell Signaling 3348 1:200 AMPK alpha1 (S485) Cell Signaling 4184 1:50 AMPK beta1 (S108) Cell Signaling 4181 1:50 a-Raf (S299) Cell Signaling 4431 1:50 Arrestin1 (S412) Cell Signaling 2416 1:100 ASK1 (S83) Cell Signaling 3761 1:50 ATF-2 (T69/71) Cell Signaling 9225 1:500 ATF-2 (T71) Cell Signaling 9221 1:100 ATP-Cytrate Lyase (S454) Cell Signaling 4331 1:100 Aurora A (T288)/B (T232)/C (T198) Cell Signaling 2914 1:50 BAD Cell Signaling 9292 1:1000 BAD (S112) Cell Signaling 9291 1:200 BAD (S136) Cell Signaling 9295 1:50 BAD (S155) Cell Signaling 9297 1:100 BAK Cell Signaling 3792 1:100 BAX Cell Signaling 2772 1:200 Bcl-2 Cell Signaling 2872 1:100 Bcl-2 (S70) Cell Signaling 2827 1:50 Bcl-2 (T56) Cell Signaling 2875 1:200 Bcl-xL Cell Signaling 2762 1:500 Bcr (Y177) Cell Signaling 3901 1:500 Beclin1 Cell Signaling 3738 1:100 beta Catenin (T41/S45) Cell Signaling 9565 1:50 BMI-1 Chemicon MAB4376 1:100 b-Raf (S445) Cell Signaling 2696 1:50 Bub3 BD 611730 1:500 c-Abl (T735) Cell Signaling 2864 1:50 c-Abl (Y245) Cell Signaling 2861 1:100

Federici et al. Caspase 9 Cell Signaling 9502 1:200 Chk-1 (S345) Cell Signaling 2341 1:50 Chk-2 (S33/35) Cell Signaling 2665 1:50 c-Kit Zymed 34-8800 1:500 c-Kit (Y703) Cell Signaling 3073 1:50 c-Kit (Y719) Cell Signaling 3391 1:50 cleaved Caspase 3 (D175) Cell Signaling 9661 1:50 cleaved Caspase 6 (D162) Cell Signaling 9761 1:50 cleaved Caspase 7 (D198) Cell Signaling 9491 1:100 cleaved Caspase 9 (D315) Cell Signaling 9505 1:100 cleaved Caspase 9 (D330) Cell Signaling 9501 1:50 cleaved Lamin A (D230) Cell Signaling 2031 1:100 cleaved PARP (D214) Cell Signaling 9541 1:100 Cofilin (S3) Cell Signaling 3313 1:100 Cox-2 BD 610203 1:200 cPLA2 (S505) Cell Signaling 2831 1:1000 c-Raf (S338) Cell Signaling 9427 1:200 CREB Cell Signaling 9192 1:200 CREB (S133) Cell Signaling 9191 1:100 CrkII (Y221) Cell Signaling 3491 1:100 CrkL (Y207) Cell Signaling 3181 1:100 Cyclin A Cell Signaling 4656 1:50 Cyclin B1 Cell Signaling 4135 1:200 Cyclin D1 BD 554180 1:100 E-Cadherin Cell Signaling 4065 1:100 EGFR Cell Signaling 2232 1:100 EGFR (S1046/1047) Cell Signaling 2238 1:500 EGFR (Y1045) Cell Signaling 2237 1:50 EGFR (Y1068) Cell Signaling 2234 1:50 EGFR (Y1148) BioSource 44-792 1:100 EGFR (Y1173) BioSource 44-794 1:100 EGFR (Y845) Cell Signaling 2231 1:500 EGFR (Y992) Cell Signaling 2235 1:50 eIF4E (S209) Cell Signaling 9741 1:50 elF4G (S1108) Cell Signaling 2441 1:1000 Elk-1 (S383) Cell Signaling 9181 1:100 eNOS (S113) Cell Signaling 9575 1:50 eNOS (S1177) Cell Signaling 9571 1:50 eNOS-NOSIII (S116) Upstate 07-357 1:500 ErbB2 DAKO A0485 1:200 ErbB2 (Y1248) Imgenex IMG-90189 1:500 ErbB3 Cell Signaling 4754 1:500 ErbB3 (Y1197) Cell Signaling 4561 1:200

Federici et al. ErbB3 (Y1289) Cell Signaling 4791 1:200 ErbB4 Cell Signaling 4795 1:50 ERK1/2 Cell Signaling 9102 1:200 ERK1/2 (T202/Y204) Cell Signaling 9101 1:1000 Estrogen Receptor alpha DAKO M7047 1:50 Estrogen Receptor alpha (S118) Cell Signaling 2511 1:1000 Ezrin (T567)/Radixin (T564)/Moesin (T558) Cell Signaling 3141 1:100 FADD (S194) Cell Signaling 2781 1:100 FAK (Y397) BD 611806 1:50 FAK (Y576/577) Cell Signaling 3281 1:200 FKHR (S256) Cell Signaling 9461 1:100 FKHR (T24)/FKHRL1 (T32) Cell Signaling 9464 1:200 FKHRL1 (S253) Upstate 06-953 1:1000 FRS2 alpha (Y436) Cell Signaling 3861 1:50 Gab1 (Y627) Cell Signaling 3231 1:1000 GSK3 alpha/beta (S21/9) Cell Signaling 9331 1:100 GSK3 alpha/beta (Y279/216) BioSource 44-604 1:500 HIF-1 alpha BD 610958 1:50 Histone H3 (S10) mitosis marker Upstate 06-570 1:200 Histone H3 (S28) Upstate 07-145 1:1000 IGF-1R (Y1131)/Insulin Receptor (Y1146) Cell Signaling 3021 1:500 IGF-1R (Y1135/1136)/ Cell Signaling 3024 1:500 Insulin Receptor (Y1150/1151) IkB alpha (S32/36) Cell Signaling 9246 1:100 Insulin Receptor beta Cell Signaling 3025 1:200 IRS-1 Cell Signaling 2382 1:500 IRS-1 (S612) Cell Signaling 2386 1:200 Jak1 (Y1022/1023) Cell Signaling 3331 1:50 Jak2 (Y1007/1008) Cell Signaling 3771 1:500 Lck (Y505) Biosource 44-850 1:50 LKB1 (S334) Cell Signaling 3055 1:50 LKB1 (S428) Cell Signaling 3051 1:100 MARCKS (S152/156) Cell Signaling 2741 1:200 MEK 1/2 Cell Signaling 9122 1:500 MEK1/2 (S217/221) Cell Signaling 9121 1:500 Met (Y1234/1235) Cell Signaling 3126 1:200 MSK1 (S360) Cell Signaling 9594 1:50 Mst1 (T183)/Mst2 (T180) Cell Signaling 3681 1:50 mTOR Cell Signaling 2972 1:200 mTOR (S2448) Cell Signaling 2971 1:100 mTOR (S2481) Cell Signaling 2974 1:100 NFkB p65 (S536) Cell Signaling 3031 1:100 p27 (T187) Zymed 71-7700 1:200 p38 MAPK Cell Signaling 9212 1:200

Federici et al. p38 MAPK (T180/Y182) Cell Signaling 9211 1:100 p40 phox (T154) Cell Signaling 4311 1:500 p53 Cell Signaling 9282 1:5000 p53 (S15) Cell Signaling 9284 1:1000 p70 S6 Kinase Cell Signaling 9202 1:100 p70 S6 Kinase (S371) Cell Signaling 9208 1:50 p70 S6 Kinase (T389) Cell Signaling 9205 1:100 p70 S6 Kinase (T412) Upstate 07-018 1:500 p90RSK (S380) Cell Signaling 9341 1:400 PAK1 (S199/204)/PAK2 (S192/197) Cell Signaling 2605 1:50 PAK1 (T423)/PAK2 (T402) Cell Signaling 2601 1:100 Paxillin (Y118) Cell Signaling 2541 1:500 PDGFR beta Cell Signaling 3169 1:200 PDGFR beta (Y716) Upstate 07-021 1:200 PDGFR beta (Y751) Cell Signaling 3161 1:50 PDK1 (S241) Cell Signaling 3061 1:200 PKA C (T197) Cell Signaling 4781 1:200 PKC alpha (S657) Upstate 06-822 1:1000 PKC alpha/betaII (T638/641) Cell Signaling 9375 1:100 PKC delta (T505) Cell Signaling 9374 1:50 PKC pan/betaII (S660) Cell Signaling 9371 1:200 PKC theta (T538) Cell Signaling 9377 1:100 PKC zeta/lambda (T410/403) Cell Signaling 9378 1:50 PLC gamma1 (Y783) Cell Signaling 2821 1:100 PLK1 Cell Signaling 4535 1:100 PLK1 (T210) BD 558400 1:200 PRAS40 (T246) BioSource 44-1100 1:1000 PRK1 (T774)/PRK2 (T816) Cell Signaling 2611 1:100 Progesteron Receptor (S190) Cell Signaling 3171 1:50 pTEN Cell Signaling 9552 1:50 pTEN (S380) Cell Signaling 9551 1:500 Pyk2 (Y402) Cell Signaling 3291 1:200 Raf (S259) Cell Signaling 9421 1:100 Ras-GFR1 (S916) Cell Signaling 3321 1:50 Ret (Y905) Cell Signaling 3221 1:100 RSK3 (T356/S360) Cell Signaling 9348 1:500 S6 Ribosomal Protein (S235/236) Cell Signaling 4856 1:200 S6 Ribosomal Protein (S240/244) Cell Signaling 2215 1:1000 SAPK/JNK (T183/Y185) Cell Signaling 9251 1:100 SEK1/MKK4 (S80) Cell Signaling 9155 1:50 SGK1 (S78) Cell Signaling 5599 1:100 Shc (Y317) Upstate 07-206 1:200 SHIP1 (Y1020) Cell Signaling 3941 1:50

Federici et al. SHP2 (Y580) Biosource 44-558 1:500 Smac/Diablo Cell Signaling 2954 1:10,000 Smad1 (S/S)/Smad5(S/S)/Smad8(S/S) Cell Signaling 9511 1:50 Smad2 (S245/250/255) Cell Signaling 3104 1:100 Smad2 (S465/467) Cell Signaling 3101 1:200 Src (Y527) Cell Signaling 2105 1:200 Src family (Y416) Cell Signaling 2101 1:200 Stat1 (Y701) Cell Signaling 9171 1:1000 Stat2 (Y690) Cell Signaling 4441 1:200 Stat3 Cell Signaling 9132 1:1000 Stat3 (S727) Cell Signaling 9134 1:100 Stat3 (Y705) Upstate 05-485 1:200 Stat5 (Y694) Cell Signaling 9351 1:50 Stat6 (Y641) Cell Signaling 9361 1:100 Survivin Cell Signaling 2808 1:100 Syk (Y525/526) Cell Signaling 2711 1:50 Tuberin/TSC2 (Y1571) Cell Signaling 3614 1:50 Tyk2 (Y1054/1055) Cell Signaling 9321 1:500 Vav3 (Y173) Biosource 44-488 1:1000 VEGFR2 Cell Signaling 2479 1:200 VEGFR2 (Y1175) Cell Signaling 2478 1:50 VEGFR2 (Y951) Cell Signaling 2471 1:200 VEGFR2 (Y996) Cell Signaling 2474 1:100 Vimentin Cell Signaling 3295 1:500 XIAP Cell Signaling 2042 1:100 Zap-70 (Y319)/Syk (Y352) Cell Signaling 2701 1:400

Federici et al.