Nomenclatural Status of Names of Tetraodontiform Fishes Based on Bibron’S Unpublished Work
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Article Evolutionary Dynamics of the OR Gene Repertoire in Teleost Fishes
bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Article Evolutionary dynamics of the OR gene repertoire in teleost fishes: evidence of an association with changes in olfactory epithelium shape Maxime Policarpo1, Katherine E Bemis2, James C Tyler3, Cushla J Metcalfe4, Patrick Laurenti5, Jean-Christophe Sandoz1, Sylvie Rétaux6 and Didier Casane*,1,7 1 Université Paris-Saclay, CNRS, IRD, UMR Évolution, Génomes, Comportement et Écologie, 91198, Gif-sur-Yvette, France. 2 NOAA National Systematics Laboratory, National Museum of Natural History, Smithsonian Institution, Washington, D.C. 20560, U.S.A. 3Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, Washington, D.C., 20560, U.S.A. 4 Independent Researcher, PO Box 21, Nambour QLD 4560, Australia. 5 Université de Paris, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France 6 Université Paris-Saclay, CNRS, Institut des Neurosciences Paris-Saclay, 91190, Gif-sur- Yvette, France. 7 Université de Paris, UFR Sciences du Vivant, F-75013 Paris, France. * Corresponding author: e-mail: [email protected]. !1 bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Abstract Teleost fishes perceive their environment through a range of sensory modalities, among which olfaction often plays an important role. -
Jorge Carlos PENICHE-PÉREZ1, Carlos GONZÁLEZ-SALAS2, Harold VILLEGAS-HERNÁNDEZ2, Raúl DÍAZ-GAMBOA2, Alfonso AGUILAR-PERERA2, Sergio GUILLEN-HERNÁNDEZ2, and Gaspar R
ACTA ICHTHYOLOGICA ET PISCATORIA (2019) 49 (2): 133–146 DOI: 10.3750/AIEP/02516 REPRODUCTIVE BIOLOGY OF THE SOUTHERN PUFFERFISH, SPHOEROIDES NEPHELUS (ACTINOPTERYGII: TETRAODONTIFORMES: TETRAODONTIDAE), IN THE NORTHERN COAST OFF THE YUCATAN PENINSULA, MEXICO Jorge Carlos PENICHE-PÉREZ1, Carlos GONZÁLEZ-SALAS2, Harold VILLEGAS-HERNÁNDEZ2, Raúl DÍAZ-GAMBOA2, Alfonso AGUILAR-PERERA2, Sergio GUILLEN-HERNÁNDEZ2, and Gaspar R. POOT-LÓPEZ2* 1Unidad de Ciencias del Agua, Centro de Investigación Científica de Yucatán, Cancún, Quintana Roo, México 2Departamento de Biología Marina, Facultad de Medicina Veterinaria y Zootecnia, Universidad Autónoma de Yucatán, Mérida, Yucatán, México Peniche-Pérez J.C., González-Salas C., Villegas-Hernández H., Díaz-Gamboa R., Aguilar-Perera A., Guillen- Hernández S., Poot-López G.R. 2019. Reproductive biology of the southern pufferfish, Sphoeroides nephelus (Actinopterygii: Tetraodontiformes: Tetraodontidae), in the northern coast off the Yucatan Peninsula, Mexico. Acta Ichthyol. Piscat. 49 (2): 133–146. Background. Overexploitation of fishery resources has led to the capture of alternative species of a lower trophic level, considered previously unprofitable or unfit for human consumption. The southern pufferfish, Sphoeroides nephelus (Goode et Bean, 1882), is a bycatch species of the recreational fishery in the USA and Mexico. Unlike other species of the genus Sphoeroides, there is no background on their reproductive cycle. Therefore, this study aimed to describe several reproductive traits (sex ratio, gonadal development, annual reproductive cycle, and fecundity) of specimens from the northern coast of the Yucatan Peninsula, Mexico. This kind of information might serve as a point of reference for its potential use either in the pharmaceutical industry, aquarium trade, as well as in aquaculture. -
Measuring Productivity of Australian Tropical Estuaries Using Standing Stock Analysis
ResearchOnline@JCU This file is part of the following work: Fries, Jakob (2019) Measuring productivity of Australian tropical estuaries using standing stock analysis. Masters (Research) Thesis, James Cook University. Access to this file is available from: https://doi.org/10.25903/km1r%2D5n34 Copyright © 2019 Jakob Fries. The author has certified to JCU that they have made a reasonable effort to gain permission and acknowledge the owners of any third party copyright material included in this document. If you believe that this is not the case, please email [email protected] Measuring productivity of Australian tropical estuaries using standing stock analysis Thesis submitted by Jakob Fries December 2019 For the degree of Master of Philosophy College of Science and Engineering School of Marine Biology and Aquaculture James Cook University Abstract Increasingly, anthropogenic use of ecosystems is resulting in cumulative degradation of ecosystem functions and the values held by these systems. Threats from nutrient pollution, catchment scale modifications to land use and water flows are increasing. This is concerning for estuarine and coastal fisheries as estuarine producers are inextricably linked to land-derived nutrients and freshwater flows. In tropical estuarine ecosystems the complexity and variability of environmental, biological, and ecological factors culminate in a matrix of largely unknown causal relationships. Because of this, our knowledge of land use impacts on fisheries is limited. Additionally, the disjunction of current measurement scales and impact scales has reduced our ability to measure the resultant impacts on estuarine ecosystems. Therefore, to fully understand anthropogenic impacts on estuarine ecosystems, integrative measures of ecosystem health, functioning, and productive output are required. -
Characterization of the G Protein-Coupled Receptor Family
www.nature.com/scientificreports OPEN Characterization of the G protein‑coupled receptor family SREB across fsh evolution Timothy S. Breton1*, William G. B. Sampson1, Benjamin Cliford2, Anyssa M. Phaneuf1, Ilze Smidt3, Tamera True1, Andrew R. Wilcox1, Taylor Lipscomb4,5, Casey Murray4 & Matthew A. DiMaggio4 The SREB (Super‑conserved Receptors Expressed in Brain) family of G protein‑coupled receptors is highly conserved across vertebrates and consists of three members: SREB1 (orphan receptor GPR27), SREB2 (GPR85), and SREB3 (GPR173). Ligands for these receptors are largely unknown or only recently identifed, and functions for all three are still beginning to be understood, including roles in glucose homeostasis, neurogenesis, and hypothalamic control of reproduction. In addition to the brain, all three are expressed in gonads, but relatively few studies have focused on this, especially in non‑mammalian models or in an integrated approach across the entire receptor family. The purpose of this study was to more fully characterize sreb genes in fsh, using comparative genomics and gonadal expression analyses in fve diverse ray‑fnned (Actinopterygii) species across evolution. Several unique characteristics were identifed in fsh, including: (1) a novel, fourth euteleost‑specifc gene (sreb3b or gpr173b) that likely emerged from a copy of sreb3 in a separate event after the teleost whole genome duplication, (2) sreb3a gene loss in Order Cyprinodontiformes, and (3) expression diferences between a gar species and teleosts. Overall, gonadal patterns suggested an important role for all sreb genes in teleost testicular development, while gar were characterized by greater ovarian expression that may refect similar roles to mammals. The novel sreb3b gene was also characterized by several unique features, including divergent but highly conserved amino acid positions, and elevated brain expression in pufer (Dichotomyctere nigroviridis) that more closely matched sreb2, not sreb3a. -
Updated Checklist of Marine Fishes (Chordata: Craniata) from Portugal and the Proposed Extension of the Portuguese Continental Shelf
European Journal of Taxonomy 73: 1-73 ISSN 2118-9773 http://dx.doi.org/10.5852/ejt.2014.73 www.europeanjournaloftaxonomy.eu 2014 · Carneiro M. et al. This work is licensed under a Creative Commons Attribution 3.0 License. Monograph urn:lsid:zoobank.org:pub:9A5F217D-8E7B-448A-9CAB-2CCC9CC6F857 Updated checklist of marine fishes (Chordata: Craniata) from Portugal and the proposed extension of the Portuguese continental shelf Miguel CARNEIRO1,5, Rogélia MARTINS2,6, Monica LANDI*,3,7 & Filipe O. COSTA4,8 1,2 DIV-RP (Modelling and Management Fishery Resources Division), Instituto Português do Mar e da Atmosfera, Av. Brasilia 1449-006 Lisboa, Portugal. E-mail: [email protected], [email protected] 3,4 CBMA (Centre of Molecular and Environmental Biology), Department of Biology, University of Minho, Campus de Gualtar, 4710-057 Braga, Portugal. E-mail: [email protected], [email protected] * corresponding author: [email protected] 5 urn:lsid:zoobank.org:author:90A98A50-327E-4648-9DCE-75709C7A2472 6 urn:lsid:zoobank.org:author:1EB6DE00-9E91-407C-B7C4-34F31F29FD88 7 urn:lsid:zoobank.org:author:6D3AC760-77F2-4CFA-B5C7-665CB07F4CEB 8 urn:lsid:zoobank.org:author:48E53CF3-71C8-403C-BECD-10B20B3C15B4 Abstract. The study of the Portuguese marine ichthyofauna has a long historical tradition, rooted back in the 18th Century. Here we present an annotated checklist of the marine fishes from Portuguese waters, including the area encompassed by the proposed extension of the Portuguese continental shelf and the Economic Exclusive Zone (EEZ). The list is based on historical literature records and taxon occurrence data obtained from natural history collections, together with new revisions and occurrences. -
Cambodian Journal of Natural History
Cambodian Journal of Natural History Artisanal Fisheries Tiger Beetles & Herpetofauna Coral Reefs & Seagrass Meadows June 2019 Vol. 2019 No. 1 Cambodian Journal of Natural History Editors Email: [email protected], [email protected] • Dr Neil M. Furey, Chief Editor, Fauna & Flora International, Cambodia. • Dr Jenny C. Daltry, Senior Conservation Biologist, Fauna & Flora International, UK. • Dr Nicholas J. Souter, Mekong Case Study Manager, Conservation International, Cambodia. • Dr Ith Saveng, Project Manager, University Capacity Building Project, Fauna & Flora International, Cambodia. International Editorial Board • Dr Alison Behie, Australia National University, • Dr Keo Omaliss, Forestry Administration, Cambodia. Australia. • Ms Meas Seanghun, Royal University of Phnom Penh, • Dr Stephen J. Browne, Fauna & Flora International, Cambodia. UK. • Dr Ou Chouly, Virginia Polytechnic Institute and State • Dr Chet Chealy, Royal University of Phnom Penh, University, USA. Cambodia. • Dr Nophea Sasaki, Asian Institute of Technology, • Mr Chhin Sophea, Ministry of Environment, Cambodia. Thailand. • Dr Martin Fisher, Editor of Oryx – The International • Dr Sok Serey, Royal University of Phnom Penh, Journal of Conservation, UK. Cambodia. • Dr Thomas N.E. Gray, Wildlife Alliance, Cambodia. • Dr Bryan L. Stuart, North Carolina Museum of Natural Sciences, USA. • Mr Khou Eang Hourt, National Authority for Preah Vihear, Cambodia. • Dr Sor Ratha, Ghent University, Belgium. Cover image: Chinese water dragon Physignathus cocincinus (© Jeremy Holden). The occurrence of this species and other herpetofauna in Phnom Kulen National Park is described in this issue by Geissler et al. (pages 40–63). News 1 News Save Cambodia’s Wildlife launches new project to New Master of Science in protect forest and biodiversity Sustainable Agriculture in Cambodia Agriculture forms the backbone of the Cambodian Between January 2019 and December 2022, Save Cambo- economy and is a priority sector in government policy. -
Esox Lucius) Ecological Risk Screening Summary
Northern Pike (Esox lucius) Ecological Risk Screening Summary U.S. Fish & Wildlife Service, February 2019 Web Version, 8/26/2019 Photo: Ryan Hagerty/USFWS. Public Domain – Government Work. Available: https://digitalmedia.fws.gov/digital/collection/natdiglib/id/26990/rec/22. (February 1, 2019). 1 Native Range and Status in the United States Native Range From Froese and Pauly (2019a): “Circumpolar in fresh water. North America: Atlantic, Arctic, Pacific, Great Lakes, and Mississippi River basins from Labrador to Alaska and south to Pennsylvania and Nebraska, USA [Page and Burr 2011]. Eurasia: Caspian, Black, Baltic, White, Barents, Arctic, North and Aral Seas and Atlantic basins, southwest to Adour drainage; Mediterranean basin in Rhône drainage and northern Italy. Widely distributed in central Asia and Siberia easward [sic] to Anadyr drainage (Bering Sea basin). Historically absent from Iberian Peninsula, Mediterranean France, central Italy, southern and western Greece, eastern Adriatic basin, Iceland, western Norway and northern Scotland.” Froese and Pauly (2019a) list Esox lucius as native in Armenia, Azerbaijan, China, Georgia, Iran, Kazakhstan, Mongolia, Turkey, Turkmenistan, Uzbekistan, Albania, Austria, Belgium, Bosnia Herzegovina, Bulgaria, Croatia, Czech Republic, Denmark, Estonia, Finland, France, Germany, Greece, Hungary, Ireland, Italy, Latvia, Lithuania, Luxembourg, Macedonia, Moldova, Monaco, 1 Netherlands, Norway, Poland, Romania, Russia, Serbia, Slovakia, Slovenia, Sweden, Switzerland, United Kingdom, Ukraine, Canada, and the United States (including Alaska). From Froese and Pauly (2019a): “Occurs in Erqishi river and Ulungur lake [in China].” “Known from the Selenge drainage [in Mongolia] [Kottelat 2006].” “[In Turkey:] Known from the European Black Sea watersheds, Anatolian Black Sea watersheds, Central and Western Anatolian lake watersheds, and Gulf watersheds (Firat Nehri, Dicle Nehri). -
Zoogeography of Digenetic Trematodes from West African Marine Fishes1
192 PROCEEDINGS OF THE HELMINTHOLOGICAL SOCIETY Zoogeography of Digenetic Trematodes from West African Marine Fishes1 JACOB H. FISCHTHAL Department of Biological Sciences, State University of New York at Binghamton, Binghamton, New York 13901. ABSTRACT: Of the 107 species of trematodes found in West African (Mauritania to Gabon) marine fishes, 100 are allocated to 64 genera in 24 families while seven are immature didymozoids. Many of these genera are located in most of the world's seas with the exception of the polar seas; only five are en- demic to West Africa. The data for the 41 species known from West Africa and elsewhere, and those morphologically closest to the 55 endemic species, indicate that they are very widely distributed, particularly in the Western and North Atlantic, and Mediterranean. Historical and present- day events concerning physical and biological environmental factors and their effects on actual and po- tential hosts as well as on life cycle stages of the trematodes have resulted in the geographical distribution reported. The distribution of marine fishes has been emphasized to explain in part the trematode distribu- tion. Studies on the geographical distribution of (Gulf of Guinea from 5° S to 15° N) and digenetic trematodes of marine fishes in various warm temperate Mauritania have been pre- seas have been presented by Manter (1955, sented by Ekman (1953), Buchanan (1958), 1963, 1967), Szidat (1961), and Lebedev Longhurst (1962), and Ingham (1970). (1969), but West African waters were not included as sufficient data were not available Zoogeographical Distribution until more recently. The digenetic trematodes Of the 107 species of trematodes found in of West African marine fishes (mainly shore West African fishes, 100 are allocated to 64 and shelf inhabitants) have been reported by genera in 24 families while seven are immature Dollfus (1929, 1937a, b, 1946, 1951, 1960), didymozoids of unknown generic status (Ap- Dollfus and Capron (1958), Thomas (1959, pendix I). -
Summary Report of Freshwater Nonindigenous Aquatic Species in U.S
Summary Report of Freshwater Nonindigenous Aquatic Species in U.S. Fish and Wildlife Service Region 4—An Update April 2013 Prepared by: Pam L. Fuller, Amy J. Benson, and Matthew J. Cannister U.S. Geological Survey Southeast Ecological Science Center Gainesville, Florida Prepared for: U.S. Fish and Wildlife Service Southeast Region Atlanta, Georgia Cover Photos: Silver Carp, Hypophthalmichthys molitrix – Auburn University Giant Applesnail, Pomacea maculata – David Knott Straightedge Crayfish, Procambarus hayi – U.S. Forest Service i Table of Contents Table of Contents ...................................................................................................................................... ii List of Figures ............................................................................................................................................ v List of Tables ............................................................................................................................................ vi INTRODUCTION ............................................................................................................................................. 1 Overview of Region 4 Introductions Since 2000 ....................................................................................... 1 Format of Species Accounts ...................................................................................................................... 2 Explanation of Maps ................................................................................................................................ -
Reproductive Biology of the Yellowspotted Puffer Torquigener Flavimaculosus (Osteichthyes: Tetraodontidae) from Gulf of Suez, Egypt
Egyptian Journal of Aquatic Biology & Fisheries Zoology Department, Faculty of Science, Ain Shams University, Cairo, Egypt. ISSN 1110 – 6131 Vol. 23(3): 503 – 511 (2019) www.ejabf.journals.ekb.eg Reproductive biology of the Yellowspotted Puffer Torquigener flavimaculosus (Osteichthyes: Tetraodontidae) from Gulf of Suez, Egypt. Amal M. Ramadan* and Magdy M. Elhalfawy Fish reproduction and spawning laboratory, Aquaculture Division, National Institute of Oceanography and Fisheries, Egypt. *Corresponding author: [email protected] ARTICLE INFO ABSTRACT Article History: The present study assesses reproductive biology of Yellowspotted Received: May 1, 2019 Puffer Torquigener flavimaculosus, were collected seasonally from Accepted: Aug. 29, 2019 commercial catches at the Attaka fishing harbor in Suez from winter 2017 Online: Sept. 2019 until autumn 2018. The sex ratio was found 1:1.08 for male and female, _______________ respectively. The fish length at first sexual maturity (L50) was 8.2 cm for males and 9.5 cm for females. In addition, the allometric pattern of gonadal Keywords: growth was studied to validate the use of the gonado-somatic index (GSI) in Gulf Suez assessments of the reproductive cycle. The highest peak of GSI (10.5 ± T. flavimaculosus 1.012%) and (4.3 ± 0.084%) for female and male were recorded in summer, Yellowspotted Puffer respectively. Values for hepato-somatic index (HSI) is very high and strong Gonado-somatic index inverse relationship with gonado-somatic index (GSI) we inferred that lipid Hepato-somatic index reserves in the liver play an important role in gonad maturation and Somatic condition factor spawning. Somatic condition factor (Kr) also varied, albeit less so, Spawning throughout the year, suggesting that body fat and muscle play lesser roles in providing energy for reproduction. -
Training Manual Series No.15/2018
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by CMFRI Digital Repository DBTR-H D Indian Council of Agricultural Research Ministry of Science and Technology Central Marine Fisheries Research Institute Department of Biotechnology CMFRI Training Manual Series No.15/2018 Training Manual In the frame work of the project: DBT sponsored Three Months National Training in Molecular Biology and Biotechnology for Fisheries Professionals 2015-18 Training Manual In the frame work of the project: DBT sponsored Three Months National Training in Molecular Biology and Biotechnology for Fisheries Professionals 2015-18 Training Manual This is a limited edition of the CMFRI Training Manual provided to participants of the “DBT sponsored Three Months National Training in Molecular Biology and Biotechnology for Fisheries Professionals” organized by the Marine Biotechnology Division of Central Marine Fisheries Research Institute (CMFRI), from 2nd February 2015 - 31st March 2018. Principal Investigator Dr. P. Vijayagopal Compiled & Edited by Dr. P. Vijayagopal Dr. Reynold Peter Assisted by Aditya Prabhakar Swetha Dhamodharan P V ISBN 978-93-82263-24-1 CMFRI Training Manual Series No.15/2018 Published by Dr A Gopalakrishnan Director, Central Marine Fisheries Research Institute (ICAR-CMFRI) Central Marine Fisheries Research Institute PB.No:1603, Ernakulam North P.O, Kochi-682018, India. 2 Foreword Central Marine Fisheries Research Institute (CMFRI), Kochi along with CIFE, Mumbai and CIFA, Bhubaneswar within the Indian Council of Agricultural Research (ICAR) and Department of Biotechnology of Government of India organized a series of training programs entitled “DBT sponsored Three Months National Training in Molecular Biology and Biotechnology for Fisheries Professionals”. -
First Documented Record of the Ocean Sunfish, Mola Mola
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Stuttgarter Beiträge Naturkunde Serie A [Biologie] Jahr/Year: 2013 Band/Volume: NS_6_A Autor(en)/Author(s): Jawad Laith A. Artikel/Article: First documented record of the ocean sunfish, Mola mola (Linnaeus), from the Sea of Oman, Sultanate of Oman (Teleostei: Molidae) 287-290 Stuttgarter Beiträge zur Naturkunde A, Neue Serie 6: 287–290; Stuttgart, 30.IV.2013 287 First documented record of the ocean sunfish, Mola mola (Linnaeus), from the Sea of Oman, Sultanate of Oman (Teleostei: Molidae) LAITH A. JAWAD Abstract The first assured record of the ocean sunfish, Mola mola (Linnaeus, 1758), in Omani waters is reported based on a specimen of 1350 mm total length which has stranded on the coast of Quriat City, 120 km north of Muscat, the capital of Oman. Morphometric and meristic data are provided and compared with those of several specimens of this species from other parts of the world. K e y w o r d s : Sea of Oman; Molidae; range extension. Zusammenfassung Der Mondfisch, Mola mola (Linnaeus, 1758), wird zum ersten Mal für Oman bestätigt. Der Nachweis basiert auf einem 1350 mm langen Exemplar, das an der Küste von Quriat City, 120 km nördlich der omanischen Hauptstadt Muscat gestrandet ist. Morphometrische und meristische Daten dieses Exemplares werden gegeben und mit einigen anderen Belegen weltweit verglichen. Contents 1 Introduction ...........................................................................................................................................................287