Culturing Keratinocytes on Biomimetic Substrates Facilitates Improved Epidermal Assembly in Vitro
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Use of Cell Culture in Virology for Developing Countries in the South-East Asia Region © World Health Organization 2017
USE OF CELL C USE OF CELL U LT U RE IN VIROLOGY FOR DE RE IN VIROLOGY V ELOPING C O U NTRIES IN THE NTRIES IN S O U TH- E AST USE OF CELL CULTURE A SIA IN VIROLOGY FOR R EGION ISBN: 978-92-9022-600-0 DEVELOPING COUNTRIES IN THE SOUTH-EAST ASIA REGION World Health House Indraprastha Estate, Mahatma Gandhi Marg, New Delhi-110002, India Website: www.searo.who.int USE OF CELL CULTURE IN VIROLOGY FOR DEVELOPING COUNTRIES IN THE SOUTH-EAST ASIA REGION © World Health Organization 2017 Some rights reserved. This work is available under the Creative Commons Attribution-NonCommercial- ShareAlike 3.0 IGO licence (CC BY-NC-SA 3.0 IGO; https://creativecommons.org/licenses/by-nc-sa/3.0/igo). Under the terms of this licence, you may copy, redistribute and adapt the work for non-commercial purposes, provided the work is appropriately cited, as indicated below. In any use of this work, there should be no suggestion that WHO endorses any specific organization, products or services. The use of the WHO logo is not permitted. If you adapt the work, then you must license your work under the same or equivalent Creative Commons licence. If you create a translation of this work, you should add the following disclaimer along with the suggested citation: “This translation was not created by the World Health Organization (WHO). WHO is not responsible for the content or accuracy of this translation. The original English edition shall be the binding and authentic edition.” Any mediation relating to disputes arising under the licence shall be conducted in accordance with the mediation rules of the World Intellectual Property Organization. -
Peptide-Based Scaffolds for the Culture and Maintenance of Primary
www.nature.com/scientificreports OPEN Peptide‑based scafolds for the culture and maintenance of primary human hepatocytes Douglas MacPherson1, Yaron Bram1, Jiwoon Park1 & Robert E. Schwartz1,2* We report here the use of a nanofbrous hydrogel as a 3D scafold for the culture and maintenance of functional primary human hepatocytes. The system is based on the cooperative assembly of a fber‑forming peptide component, fuorenylmethyloxycarbonyl‑diphenylalanine (Fmoc‑FF), and the integrin‑binding functional peptide ligand, Fmoc‑arginine‑glycine‑aspartic acid (Fmoc‑RGD) into a nanofbrous gel at physiological pH. This Fmoc‑FF/RGD hydrogel was formulated to provide a biomimetic microenvironment with some critical features such as mechanical properties and nanofber morphology, which were optimized to support hepatocyte culture. The material was shown to support maintenance and function of encapsulated primary human hepatocytes as indicated by actin staining, qRT‑PCR, and functional cytochrome P450 assays. The designed gel was shown to outperform Matrigel in cytochrome P450 functional assays. The hydrogel may prove useful for liver development and disease models, as well as providing insights into the design of future implantable scafolds for the regeneration of liver tissue in patients with liver disease. Cellular function is determined in part by micro-environmental cues such as soluble factors, extracellular matrix, and cell–cell interactions 1,2. In vitro culture of epithelial cells is ofen associated with epithelial cell dediferentia- tion (i.e. marked by rapid loss of cell-specifc morphology, phenotype, and function)3. Consequently, there is a need for the development and employment of improved materials which can more closely mimic the in vivo microenvironment and reconstitute the appropriate environmental cues in vitro1–3. -
Study for Pathogenesis of Congenital Cholesteatoma with Comparison of Proteins Expressed in Congenital Cholesteatoma, Acquired C
Study for pathogenesis of congenital cholesteatoma with comparison of proteins expressed in congenital cholesteatoma, acquired cholesteatoma and skin of the external auditory canal through proteomics Seung Ho Shin Department of Medicine The Graduate School, Yonsei University Study for pathogenesis of congenital cholesteatoma with comparison of proteins expressed in congenital cholesteatoma, acquired cholesteatoma and skin of the external auditory canal through proteomics Directed by Professor Jae Young Choi The Doctoral Dissertation submitted to the Department of Medicine, the Graduate School of Yonsei University in partial fulfillment of the requirements for the degree of Doctor of Philosophy Seung Ho Shin June 2014 ACKNOWLEDGEMENTS In the initial period of my fellowship, I wrote a book, Temporal Bone Dissection Manual as a coauthor with Professor Won Sang Lee, Ho-Ki Lee and Jae Young Choi. Through this book, I learned about much knowledge from them. Professor Jae Young Choi advised me to go for a Ph.D. I admitted graduate school for a Ph.D. in 2007. In my doctoral course, he has instructed me in detail on the basic research. He has demonstrated precise and delicate laboratory techniques and showed outstanding ability to create new ideas. Also, he has often said to me that a researcher must be honest to his colleagues and even to himself. After the summer of 2013, he gave me an idea for this paper, which was for congenital cholesteatoma analysis with proteomics. He always displayed endless energy and enthusiasm for scientific experiments even after many demanding surgeries. His passion motivated me to follow suit and seven months of our work at last bore fruit. -
Nano-Silver Particles Reduce Contaminations in Tissue Culture but Decrease Regeneration Rate and Slows Down Growth and Development of Aldrovanda Vesiculosa Explants
applied sciences Article Nano-Silver Particles Reduce Contaminations in Tissue Culture but Decrease Regeneration Rate and Slows Down Growth and Development of Aldrovanda vesiculosa Explants Marzena Parzymies Subdepartment of Ornamental Plants and Dendrology, Institute of Horticultural Production, Faculty of Horticulture and Landscape Architecture, University of Life Sciences in Lublin, Ul. Gł˛eboka28, 20-612 Lublin, Poland; [email protected] Abstract: Aldrovanda vesiculosa is a carnivorous water plant which is endangered by extinction worldwide. The number of natural stands and populations has decreased; therefore, there is a need for its active protection. The best method would be an in vitro culture. One of the main problems is disinfection of the explants. Therefore, it was decided that we should treat the explants with nano- silver particles. The explants were shoot fragments which were disinfected with sodium hypochlorite and then placed in a liquid 1/5 MS medium, supplemented with silver nanoparticles (AgNPs) at a concentration of 5 mg·dm−3. It was observed that AgNPs reduced the number of contaminations but also led to necrosis of the shoots. The shoots, which undertook regeneration in presence of AgNPs, were smaller and did not form traps; however, after being moved to fresh media twice, they started to develop normal leaves. Taking into consideration both disinfection and regeneration rates, it might be advisable to disinfect aldrovanda shoots in sodium hypochlorite only, without AgNPs. The results Citation: Parzymies, M. Nano-Silver of the research might indicate a toxic activity of AgNPs towards water plants, which seems a big Particles Reduce Contaminations in problem, as nanoparticles are commonly used in all the fields of life. -
Structural and Biochemical Changes Underlying a Keratoderma-Like Phenotype in Mice Lacking Suprabasal AP1 Transcription Factor Function
Citation: Cell Death and Disease (2015) 6, e1647; doi:10.1038/cddis.2015.21 OPEN & 2015 Macmillan Publishers Limited All rights reserved 2041-4889/15 www.nature.com/cddis Structural and biochemical changes underlying a keratoderma-like phenotype in mice lacking suprabasal AP1 transcription factor function EA Rorke*,1, G Adhikary2, CA Young2, RH Rice3, PM Elias4, D Crumrine4, J Meyer4, M Blumenberg5 and RL Eckert2,6,7,8 Epidermal keratinocyte differentiation on the body surface is a carefully choreographed process that leads to assembly of a barrier that is essential for life. Perturbation of keratinocyte differentiation leads to disease. Activator protein 1 (AP1) transcription factors are key controllers of this process. We have shown that inhibiting AP1 transcription factor activity in the suprabasal murine epidermis, by expression of dominant-negative c-jun (TAM67), produces a phenotype type that resembles human keratoderma. However, little is understood regarding the structural and molecular changes that drive this phenotype. In the present study we show that TAM67-positive epidermis displays altered cornified envelope, filaggrin-type keratohyalin granule, keratin filament, desmosome formation and lamellar body secretion leading to reduced barrier integrity. To understand the molecular changes underlying this process, we performed proteomic and RNA array analysis. Proteomic study of the corneocyte cross-linked proteome reveals a reduction in incorporation of cutaneous keratins, filaggrin, filaggrin2, late cornified envelope precursor proteins, hair keratins and hair keratin-associated proteins. This is coupled with increased incorporation of desmosome linker, small proline-rich, S100, transglutaminase and inflammation-associated proteins. Incorporation of most cutaneous keratins (Krt1, Krt5 and Krt10) is reduced, but incorporation of hyperproliferation-associated epidermal keratins (Krt6a, Krt6b and Krt16) is increased. -
Spiny Mice (Acomys) Exhibit Attenuated Hallmarks of Aging And
bioRxiv preprint doi: https://doi.org/10.1101/2020.05.07.083287; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 2 3 4 5 6 Title: Spiny mice (Acomys) exhibit attenuated hallmarks of aging and rapid cell turnover after UV 7 exposure in the skin epidermis 8 Authors: Wesley Wong1, Austin Kim1, Ashley W. Seifert2, Malcolm Maden3, and Justin D. Crane1 9 Affiliations: 1Department of Biology, Northeastern University, 360 Huntington Avenue, Boston, 10 MA 02115, 2Department of Biology, University of Kentucky, Lexington, KY 40506, 3UF 11 Genetics Institute & Department of Biology, University of Florida, Gainesville, FL 32611 12 13 Keywords: Spiny mouse, skin, epidermis, UV radiation, aging 14 15 16 17 18 19 20 21 22 23 24 25 26 27 bioRxiv preprint doi: https://doi.org/10.1101/2020.05.07.083287; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 28 Abstract 29 The study of long-lived and regenerative animal models has revealed diverse protective responses 30 to stressors such as aging and tissue injury. Spiny mice (Acomys) are a unique mammalian model 31 of skin regeneration, but their response to other types of physiological skin damage have not been 32 investigated. -
Chapter 11: Virology
CHAPTER 11 Virology Ken Peters USFWS – Bozeman Fish Health Center Bozeman, Montana NWFHS Laboratory Procedures Manual - Second Edition, June 2004 Chapter 11 - Page 1 I. Introduction Detection of aquatic animal viruses historically has been by growth and isolation on living cell cultures appropriately researched and chosen for the propagation of target viruses and species of host. Viral detection can also include immunological and nucleotide testing procedures. The determination of a testing procedure is a complex decision involving factors of cost, timeliness, sensitivity, specificity, efficiency, and available host tissues and technology. For the purposes of the Wild Fish Health Survey, the USFWS has chosen the use of cell culture for initial screening and corroboration of test results using appropriate nucleotide primers of specific viral pathogens in polymerase chain reaction (PCR) tests. Other corroborative tests may also be utilized, including serum neutralization, indirect fluorescent antibody techniques, biotinylated DNA probes, and immuno-dot blot tests (see Chapter 12 - Corroborative Testing of Viral Isolates). The following sections describe the procedures and methods for virology using standard cell culture techniques. Definitions: Several terms are used routinely in virology and throughout this section. A full Glossary of terms can be found in Appendix A. Media Formulations: See Appendix B: Media Used in Tissue Culture and Virology. II. Selection of Appropriate Cell Lines All viral testing will utilize cell lines traceable to cell lines from the American Type Culture Collection (ATCC) when available. At the minimum, cell lines will be tested annually for viral sensitivity and mycoplasma infection: see section VI. Quality Control in Tissue Culture, in Chapter 10 -Tissue Culture of Fish Cell Lines. -
Introduction to Mammalian Cell Culture
Workshop Training Series Biomedical and Obesity Research Core Nebraska Center for the Prevention of Obesity Diseases through Dietary Molecules Introduction to Mammalian Cell Culture April 9, 2019 Yongjun Wang Ph.D. Director of Biomedical and Obesity Research Core Nebraska Center for the Prevention of Obesity Diseases through Dietary Molecules What Is Cell Culture Cell culture is the process by which cells are grown in controlled conditions outside of their native environment. Timeline: key milestone in cell cultures History of Cell Culture http://dx.doi.org/10.5772/66905 Primary vs Cell line Primary cells Cell lines Lifespan and division capacity Limited Indefinite Isolated in the lab or bought from Source Bought from commercial provider commercial provider Care and maintenance Complex and difficult Easy to maintain or proliferate Chromosomal aberration Minimal Several Retention of functional markers and Yes Not always signaling pathways Functional study, diagnosis, Drug development, vaccine and protein Application Gene therapy, et al. production, et al. Three Types of Cells Epithelial-like cells Fibroblast-like cells Lymphoblast-like cells Cell differentiation 3T3L1 cells C212 cells Cell Culture Vessels • Most adherent cells require attachment to proliferate • Polystyrene are treated to become hydrophilic and negatively charged once medium is added • Coating with basic synthetic polymers • Poly-L-lysine • Coating with matrix proteins • Collagen, laminin, gelatin, fibronectin Class II Biological Safety Cabinet The Class II Biological Safety -
The Correlation of Keratin Expression with In-Vitro Epithelial Cell Line Differentiation
The correlation of keratin expression with in-vitro epithelial cell line differentiation Deeqo Aden Thesis submitted to the University of London for Degree of Master of Philosophy (MPhil) Supervisors: Professor Ian. C. Mackenzie Professor Farida Fortune Centre for Clinical and Diagnostic Oral Science Barts and The London School of Medicine and Dentistry Queen Mary, University of London 2009 Contents Content pages ……………………………………………………………………......2 Abstract………………………………………………………………………….........6 Acknowledgements and Declaration……………………………………………...…7 List of Figures…………………………………………………………………………8 List of Tables………………………………………………………………………...12 Abbreviations….………………………………………………………………..…...14 Chapter 1: Literature review 16 1.1 Structure and function of the Oral Mucosa……………..…………….…..............17 1.2 Maintenance of the oral cavity...……………………………………….................20 1.2.1 Environmental Factors which damage the Oral Mucosa………. ….…………..21 1.3 Structure and function of the Oral Mucosa ………………...….……….………...21 1.3.1 Skin Barrier Formation………………………………………………….……...22 1.4 Comparison of Oral Mucosa and Skin…………………………………….……...24 1.5 Developmental and Experimental Models used in Oral mucosa and Skin...……..28 1.6 Keratinocytes…………………………………………………….….....................29 1.6.1 Desmosomes…………………………………………….…...............................29 1.6.2 Hemidesmosomes……………………………………….…...............................30 1.6.3 Tight Junctions………………………….……………….…...............................32 1.6.4 Gap Junctions………………………….……………….….................................32 -
Basic Pluripotent Stem Cell Culture Protocols Maria Borowski∗, Maria Giovino-Doherty, Lan Ji, Meng-Jiao Shi, Kelly P
Basic pluripotent stem cell culture protocols Maria Borowski∗, Maria Giovino-Doherty, Lan Ji, Meng-Jiao Shi, Kelly P. Smith and Joseph Laning, Massachusetts Stem Cell Bank, University of Massachusetts Medical School, Shrewsbury, MA 01545 USA Abstract Stem cell research is a rapidly expanding field with the potential to develop therapeutic agents to treat diseases as well as study disease development from early stages. The culture of human pluripotent stem cells shares many of the same protocols as standard mammalian cell culture. However, the successful culture and maintenance of human pluripotent stem cells (hPSCs) in an undifferentiated state requires additional consider- ations to ensure that cells maintain their key characteristics of self-renewal and pluripotency. There are several basic techniques needed for the culturing of mammalian cells, including thawing frozen stocks, plating cells in culture vessels, changing media, passaging and cryopreservation. The protocols in this document represent a subset of the standard operating procedures used to maintain and culture stem cells at the Massachusetts Human Stem Cell Bank, and have been thoroughly testing and verified. A Stem cell culture considerations Stem cell research is a rapidly expanding field with the potential to develop therapeutic agents to treat diseases as well as study disease development from early stages. However, to fulfill this promise, researchers need to have access to standardized protocols for the development, maintenance and differentiation of these unique cells. Such “best practices” will allow comparisons of different studies and hasten the refinement of these techniques. Such standardization can be driven by resources such as StemBook and by stem cell banks. -
From 2D Culture to Organ-On-Chip Lab on a Chip
Volume 18 Number 9 07 May 2018 Pages 1267–1390 Lab on a Chip Devices and applications at the micro- and nanoscale rsc.li/loc ISSN 1473-0197 CRITICAL REVIEW Jochen Kieninger et al. Microsensor systems for cell metabolism – from 2D culture to organ-on-chip Lab on a Chip View Article Online CRITICAL REVIEW View Journal | View Issue Microsensor systems for cell metabolism – from Cite this: Lab Chip,2018,18,1274 2D culture to organ-on-chip Jochen Kieninger, * Andreas Weltin, Hubert Flamm and Gerald A. Urban Microsensor systems for cell metabolism are essential tools for investigation and standardization in cell cul- ture. Electrochemical and optical read-out schemes dominate, which enable the marker-free, continuous, online recording of transient effects and deliver information beyond microscopy and end-point tests. There has been much progress in microfluidics and microsensors, but the translation of both into standard cell culture procedures is still limited. Within this critical review, we discuss different cell culture formats ranging from standard culture vessels to dedicated microfluidic platforms. Key aspects are the appropriate supply of cells, mass transport of metabolites to the sensors and generation of stimuli. Microfluidics enable the transition from static to dynamic conditions in culture and measurement. We illustrate the parameters oxy- gen (respiration), pH (acidification), glucose and lactate (energy metabolism) as well as short-lived reactive Creative Commons Attribution 3.0 Unported Licence. species (ROS/RNS) from the perspective of microsensor integration in 2D and 3D cell culture. We discuss different sensor principles and types, along with their limitations, microfabrication technologies and mate- Received 1st September 2017, rials. -
Regulation of Keratin Filament Network Dynamics
Regulation of keratin filament network dynamics Von der Fakultät für Mathematik, Informatik und Naturwissenschaften der RWTH Aachen University zur Erlangung des akademischen Grades eines Doktors der Naturwissenschaften genehmigte Dissertation vorgelegt von Diplom Biologe Marcin Maciej Moch aus Dzierżoniów (früher Reichenbach, NS), Polen Berichter: Universitätsprofessor Dr. med. Rudolf E. Leube Universitätsprofessor Dr. phil. nat. Gabriele Pradel Tag der mündlichen Prüfung: 19. Juni 2015 Diese Dissertation ist auf den Internetseiten der Hochschulbibliothek online verfügbar. This work was performed at the Institute for Molecular and Cellular Anatomy at University Hospital RWTH Aachen by the mentorship of Prof. Dr. med. Rudolf E. Leube. It was exclusively performed by myself, unless otherwise stated in the text. 1. Reviewer: Univ.-Prof. Dr. med. Rudolf E. Leube 2. Reviewer: Univ.-Prof. Dr. phil. nat. Gabriele Pradel Ulm, 15.02.2015 2 Publications Publications Measuring the regulation of keratin filament network dynamics. Moch M, and Herberich G, Aach T, Leube RE, Windoffer R. 2013. Proc Natl Acad Sci U S A. 110:10664-10669. Intermediate filaments and the regulation of focal adhesion. Leube RE, Moch M, Windoffer R. 2015. Current Opinion in Cell Biology. 32:13–20. "Panta rhei": Perpetual cycling of the keratin cytoskeleton. Leube RE, Moch M, Kölsch A, Windoffer R. 2011. Bioarchitecture. 1:39-44. Intracellular motility of intermediate filaments. Leube RE, Moch M, Windoffer R. Under review in: The Cytoskeleton. Editors: Pollard T., Dutcher S., Goldman R. Cold Springer Harbor Laboratory Press, Cold Spring Harbor. Multidimensional monitoring of keratin filaments in cultured cells and in tissues. Schwarz N, and Moch M, Windoffer R, Leube RE.