Combined Effects of Simulated Browsing, Warming and Nutrient
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ITS Secondary Structure Reconstruction to Resolve Taxonomy and Phylogeny of the Betula L
ITS secondary structure reconstruction to resolve taxonomy and phylogeny of the Betula L. genus Andrii S. Tarieiev1, Oliver Gailing1,2 and Konstantin V. Krutovsky1,2,3,4,5 1 Department of Forest Genetics and Forest Tree Breeding, Georg-August University of Göttingen, Göttingen, Germany 2 Center for Integrated Breeding Research, Georg-August University of Göttingen, Göttingen, Germany 3 Laboratory of Forest Genomics, Genome Research and Education Center, Institute of Fundamental Biology and Biotechnology, Siberian Federal University, Krasnoyarsk, Russia 4 Laboratory of Population Genetics, N.I. Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia 5 Department of Ecosystem Science and Management, Texas A&M University, College Station, TX, United States of America ABSTRACT The taxonomy and phylogeny of the Betula L. genus remain unresolved and are very difficult to assess due to several factors, especially because of frequent hybridization among different species. In the current study, we used nucleotide sequences of two internal transcribed spacer regions (ITS1 and ITS2), which are commonly used as phylogenetic markers. In addition to their nucleotide variation we reconstructed their secondary structure and used it to resolve phylogenetic relationships of some birch species. We explored whether consideration of secondary structure in phylogenetic analyses based on neighbor-joining, maximum parsimony, maximum likelihood, and Bayesian inference methods would help us obtain more solid support of the reconstructed phylogenetic trees. The results were not unambiguous. There were only a few clades with higher support when secondary structure was included into analysis. The phylogenetic trees generated using different methods were mostly in agreement Submitted 16 October 2020 with each other. -
Native Or Suitable Plants City of Mccall
Native or Suitable Plants City of McCall The following list of plants is presented to assist the developer, business owner, or homeowner in selecting plants for landscaping. The list is by no means complete, but is a recommended selection of plants which are either native or have been successfully introduced to our area. Successful landscaping, however, requires much more than just the selection of plants. Unless you have some experience, it is suggested than you employ the services of a trained or otherwise experienced landscaper, arborist, or forester. For best results it is recommended that careful consideration be made in purchasing the plants from the local nurseries (i.e. Cascade, McCall, and New Meadows). Plants brought in from the Treasure Valley may not survive our local weather conditions, microsites, and higher elevations. Timing can also be a serious consideration as the plants may have already broken dormancy and can be damaged by our late frosts. Appendix B SELECTED IDAHO NATIVE PLANTS SUITABLE FOR VALLEY COUNTY GROWING CONDITIONS Trees & Shrubs Acer circinatum (Vine Maple). Shrub or small tree 15-20' tall, Pacific Northwest native. Bright scarlet-orange fall foliage. Excellent ornamental. Alnus incana (Mountain Alder). A large shrub, useful for mid to high elevation riparian plantings. Good plant for stream bank shelter and stabilization. Nitrogen fixing root system. Alnus sinuata (Sitka Alder). A shrub, 6-1 5' tall. Grows well on moist slopes or stream banks. Excellent shrub for erosion control and riparian restoration. Nitrogen fixing root system. Amelanchier alnifolia (Serviceberry). One of the earlier shrubs to blossom out in the spring. -
Abstracts Annual Scientific Meeting ᐊᕐᕌᒍᑕᒫᕐᓯᐅᑎᒥᒃ ᑲᑎᒪᓂᕐᒃ
Abstracts Annual Scientific Meeting ᐊᕐᕌᒍᑕᒫᕐᓯᐅᑎᒥᒃ ᑲᑎᒪᓂᕐᒃ 2016 Réunion scientifique annuelle 5-9/12/2016, Winnipeg, MB ASM2016 Conference Program Oral Presentation and Poster Abstracts ABSTRACTS FROBISHER BAY: A NATURAL LABORATORY complete habitat characterization. This recent sampling FOR THE STUDY OF ENVIRONMENTAL effort recorded heterogeneous substrates composed of CHANGE IN CANADIAN ARCTIC MARINE various proportions of boulder, cobbles, gravel, sand HABITATS. and mud forming a thin veneer over bedrock at water depths less than 200 metres. Grab samples confirm Aitken, Alec (1), B. Misiuk (2), E. Herder (2), E. the relative abundance of mollusks, ophiuroids and Edinger (2), R. Deering (2), T. Bell (2), D. Mate(3), C. tubiculous polychaetes as constituents of the infauna Campbell (4), L. Ham (5) and V.. Barrie (6) in the inner bay. Drop video images captured a diverse (1) University of Saskatchewan (Saskatoon, Canada); epifauna not previously described from the FRBC (2) Department of Geography, Memorial University of research. A variety of bryozoans, crinoid echinoderms, Newfoundland (St. John’s, NL, Canada); sponges and tunicates recorded in the images remain (3) Polar Knowledge Canada (Ottawa, Ontario, to be identified. Habitat characterization will allow us Canada); to quantify ecological change in benthic invertebrate (4) Marine Resources Geoscience, Geological Survey of species composition within the habitat types represented Canada (Dartmouth, NS, Canada); at selected sampling stations through time. Such long- (5) Canada-Nunavut Geoscience Office, Natural term studies are crucial for distinguishing directional Resources Canada (Iqaluit, NU, Canada); change in ecosystems. Marine Geological Hazards (6) Marine Geoscience, Geological Survey of Canada and Seabed Disturbance: Extensive multibeam (Sidney, BC, Canada) echosounding surveys have recorded more than 250 submarine slope failures in inner Frobisher Bay. -
Evolution of Angiosperm Pollen. 7. Nitrogen-Fixing Clade1
Evolution of Angiosperm Pollen. 7. Nitrogen-Fixing Clade1 Authors: Jiang, Wei, He, Hua-Jie, Lu, Lu, Burgess, Kevin S., Wang, Hong, et. al. Source: Annals of the Missouri Botanical Garden, 104(2) : 171-229 Published By: Missouri Botanical Garden Press URL: https://doi.org/10.3417/2019337 BioOne Complete (complete.BioOne.org) is a full-text database of 200 subscribed and open-access titles in the biological, ecological, and environmental sciences published by nonprofit societies, associations, museums, institutions, and presses. Your use of this PDF, the BioOne Complete website, and all posted and associated content indicates your acceptance of BioOne’s Terms of Use, available at www.bioone.org/terms-of-use. Usage of BioOne Complete content is strictly limited to personal, educational, and non - commercial use. Commercial inquiries or rights and permissions requests should be directed to the individual publisher as copyright holder. BioOne sees sustainable scholarly publishing as an inherently collaborative enterprise connecting authors, nonprofit publishers, academic institutions, research libraries, and research funders in the common goal of maximizing access to critical research. Downloaded From: https://bioone.org/journals/Annals-of-the-Missouri-Botanical-Garden on 01 Apr 2020 Terms of Use: https://bioone.org/terms-of-use Access provided by Kunming Institute of Botany, CAS Volume 104 Annals Number 2 of the R 2019 Missouri Botanical Garden EVOLUTION OF ANGIOSPERM Wei Jiang,2,3,7 Hua-Jie He,4,7 Lu Lu,2,5 POLLEN. 7. NITROGEN-FIXING Kevin S. Burgess,6 Hong Wang,2* and 2,4 CLADE1 De-Zhu Li * ABSTRACT Nitrogen-fixing symbiosis in root nodules is known in only 10 families, which are distributed among a clade of four orders and delimited as the nitrogen-fixing clade. -
Autumn Willow in Rocky Mountain Region the Black Hills National
United States Department of Agriculture Conservation Assessment Forest Service for the Autumn Willow in Rocky Mountain Region the Black Hills National Black Hills National Forest, South Dakota and Forest Custer, South Dakota Wyoming April 2003 J.Hope Hornbeck, Carolyn Hull Sieg, and Deanna J. Reyher Species Assessment of Autumn willow in the Black Hills National Forest, South Dakota and Wyoming J. Hope Hornbeck, Carolyn Hull Sieg and Deanna J. Reyher J. Hope Hornbeck is a Botanist with the Black Hills National Forest in Custer, South Dakota. She completed a B.S. in Environmental Biology (botany emphasis) at The University of Montana and a M.S. in Plant Biology (plant community ecology emphasis) at the University of Minnesota-Twin Cities. Carolyn Hull Sieg is a Research Plant Ecologist with the Rocky Mountain Research Station in Flagstaff, Arizona. She completed a B.S. in Wildlife Biology and M.S. in Range Science from Colorado State University and a Ph.D. in Range and Wildlife Management (fire ecology) at Texas Tech University. Deanna J. Reyher is Ecologist/Soil Scientist with the Black Hills National Forest in Custer, South Dakota. She completed a B.S. degree in Agronomy (soil science and crop production emphasis) from the University of Nebraska – Lincoln. EXECUTIVE SUMMARY Autumn willow, Salix serissima (Bailey) Fern., is an obligate wetland shrub that occurs in fens and bogs in the northeastern United States and eastern Canada. Disjunct populations of autumn willow occur in the Black Hills of South Dakota. Only two populations occur on Black Hills National Forest lands: a large population at McIntosh Fen and a small population on Middle Boxelder Creek. -
Introgression in Betula Species of Different Ploidy Levels and the Analysis of the Betula Nana Genome
Introgression in Betula Species of Different Ploidy Levels and the Analysis of the Betula nana Genome JASMIN ZOHREN School of Biological and Chemical Sciences Queen Mary University of London Mile End Road London E1 4NS Supervisors: Dr Richard J. A. Buggs Prof Richard A. Nichols November 2016 Submitted in partial fulfilment of the requirements of the Degree of Doctor of Philosophy 1 Statement of Originality I, Jasmin Zohren, confirm that the research included within this thesis is my own work or that where it has been carried out in collaboration with, or supported by others, that this is duly acknowledged below and my contribution indicated. Previously published material is also acknowledged below. I attest that I have exercised reasonable care to ensure that the work is original, and does not to the best of my knowledge break any UK law, infringe any third party’s copyright or other Intellectual Property Right, or contain any confidential material. I accept that the College has the right to use plagiarism detection software to check the electronic version of the thesis. I confirm that this thesis has not been previously submitted for the award of a degree by this or any other university. The copyright of this thesis rests with the author and no quotation from it or information derived from it may be published without the prior written consent of the author. Signature: Date: Details of collaboration and publications Chapter 2 is published in Zohren et al. (2016): Zohren J, Wang N, Kardailsky I, Borrell JS, Joecker A, Nichols RA, Buggs RJA (2016). -
Kenai National Wildlife Refuge Species List, Version 2018-07-24
Kenai National Wildlife Refuge Species List, version 2018-07-24 Kenai National Wildlife Refuge biology staff July 24, 2018 2 Cover image: map of 16,213 georeferenced occurrence records included in the checklist. Contents Contents 3 Introduction 5 Purpose............................................................ 5 About the list......................................................... 5 Acknowledgments....................................................... 5 Native species 7 Vertebrates .......................................................... 7 Invertebrates ......................................................... 55 Vascular Plants........................................................ 91 Bryophytes ..........................................................164 Other Plants .........................................................171 Chromista...........................................................171 Fungi .............................................................173 Protozoans ..........................................................186 Non-native species 187 Vertebrates ..........................................................187 Invertebrates .........................................................187 Vascular Plants........................................................190 Extirpated species 207 Vertebrates ..........................................................207 Vascular Plants........................................................207 Change log 211 References 213 Index 215 3 Introduction Purpose to avoid implying -
Betula Nana L
Scientific name: Betula nana L. Family: Betulaceae Common names: bog birch, arctic dwarf birch, swamp birch Plant Description nutrient poor soil, but has no tolerance to salinity A perennial, deciduous shrub, spreading or ascending (USDA NRCS n.d.). to 3 m in height; bark, dark brown, smooth, close; Distribution: 0 to 3,400 m (Tollefson 2007). lenticels pale, inconspicuous, unexpanded; twigs Alberta, British Columbia, Manitoba, New covered with large, warty, resinous glands; leaf blade Brunswick, Newfoundland., Northwest Territories, is leathery, egg shaped to nearly circular with 2 to Nova Scotia, Ontario, Prince Edward Island, Quebec, 6 pairs of lateral veins, 0.5 to 3 × 1 to 2.5 cm, teeth Saskatchewan, Yukon; Alaska, California, Colorado, obtuse to rounded, surfaces, often covered with Idaho, Maine, Mont., New Hampshire, New York, resinous glands; flowers are monoecious; preformed Oregon, South Dakota, Utah, Washington, Wyoming male catkins are 2.5 to 5 cm long, pendant, and (eFloras n.d.). become much longer and yellow-green as they open Alaska, Yukon to southern Baffin Island south to in mid-spring; females are upright, 2.5 to 5 cm long, California, Nevada, Colorado, central Saskatchewan, and reddish green in color (eFloras n.d.). central Manitoba, Great Lakes, Newfoundland (Moss Seed: Samaras with wings narrower than body, 1983). broadest near summit, extended slightly beyond body apically (eFloras n.d.). Phenology Leaves appear in April to May (TLF 2012). Flowers from June to August, fruit ripens August to Betula nana catkins Habitat and Distribution Habitat: Arctic and alpine tundra, acidic rocky slopes and barrens, muskegs, peat bogs, stream banks, open subalpine summits. -
F231XY124AK Ecological Dynamics of the Site
Ecological Site Description ID: F231XY124AK Ecological Dynamics of the Site: This sub-alpine ecological site was observed at high elevation generally on convex backslopes of mountains (i.e. > 5% slopes; between 850-1150 meters). In this ecological site, cryoturbation resulted in patterned ground features known as circles. For community phase 1.1, soils were classified as haplocryepts and were composed of organic matter over gravelly cryoturbate. No obvious rock sorting was observed. Rocks are typically present but not abundant at the soil surface. While white spruce was present, cover in climax phase was generally sparse and deemed limited in large part due to the cold micro-climate. While occurring in similar landscape positions as R231XY129AK, soils associated with the above ecological site have greater rock fragments and lack permafrost. Fire was a documented disturbance regime resulting in three observed phases. The typical fire return interval for coniferous forests of interior Alaska is approximately 100 years. For this ecological site, high-severity fire events are believed to be more typical then low-severity fire events. Low-severity and high-severity fire events appear to cause differences in the depth of organic material on the soil surface, present vegetation, and potential vegetation State and Transition Diagram: State ID Number: 1 State Name: Reference State Narrative: For the climax phase, dominant vegetation was a mixture of shrubs growing at the medium, low, and dwarf stratums. Tree cover was sporadic and occurred evenly across the tall, medium, stunted, and regenerative stratums. Sites were considered woodlands (i.e. 10-25% tree cover). The decision to split the phases was based primarily on the general height/age of the trees present, which we felt 1 indicated time since fire disturbances. -
Pdf of Article
ORIGINAL ARTICLE Rec. Nat. Prod . 9:1 (2015) 41-48 Content and Dynamics of Polyphenols in Betula spp. Leaves Naturally Growing in Estonia Ain Raal 1∗∗∗, Tatjana Boikova 1 and Tõnu Püssa 2 1Department of Pharmacy, University of Tartu, Nooruse 1, Tartu 50411, Estonia 2Department of Food Hygiene, Estonian University of Life Sciences, Kreutzwaldi 58A, Tartu 51014, Estonia (Received November 15, 2013; Revised November 15, 2013; Accepted July 8, 2014) Abstract: The seasonal variation in the chemical composition and chemosystematics of the leaves of Betula pendula Roth. , B. pubescens Ehrh. , B. humilis Schrank and B. nana L. ( Betulaceae ), growing naturally in Estonia, and in B. pendula buds was studied. Polyphenols were analyzed by HPLC and HPLC-MS/MS. Hyperoside (423-3724 µg/g), myricetin glucuronide (106-1696 µg/g), quercetin glucuronide (206-1435 µg/g), myricetin glucoside (89-1197 µg/g), quercitrin (53-578 µg/g), and kaempferol glucuronide (77-342 µg/g) were found to be the main flavonoids in the birch leaves studied. The content of flavonoids in buds was lower than in leaves. The moderate correlations between the contents of the main polyphenols in the compared birch species were determined: B. pendula showed correlations with B. pubescens and with B. humilis . The seasonal variation of polyphenols was specific for each birch species, and no general tendency was observed. The presence of coumaric acid O-hexoside is not typical to B. nana and the content of some polyphenols can indicate the collecting time of plant material. Keywords: Betula pendula; Betula pubescens; Betula humilis; Betula nana; polyphenols. © 2015 ACG Publications. -
Betulaceae Birch Family
Betulaceae Birch Family Betulaceae is a family of trees and shrubs included in six genera; four of which contain species native to Page | 317 Nova Scotia. Mostly ranging throughout the northern hemisphere, 120 species are found worldwide, generally in temperate climates. Flowers are unisexual; species are monoecious. Staminate catkins are pendulous; pistillate catkins are erect or pendulous, usually firm and often woody. Petals are lacking; sepals tend to be tiny. Fruit is a samara or a nut with a single seed. Leaves are simple, alternate and mostly serrate. Venation is straight and pinnate. Key to species A. Bark of older twigs and trunk without lenticels; fruit not winged, enclosed in an B involucre. B. Shrub, wiry with creeping stems; mature fruits 1–2 nuts, 1cm thick, Corylus the involucre long-beaked, bristly when immature; leaves with 5–8 pairs of veins, doubly serrate; winter buds velutinous, ovate. bb. Small tree; nutlets enclosed in a loose sac; leaves with 9 or more Ostrya pairs of veins, merely serrate; winter buds dark brown. aa. Bark of twigs with elongated lenticels; fruit small, exposed in the axils of the C scales, winged. C. Scales of pistillate catkins, thin and papery, deciduous, usually 3 Betula lobed; bark of mature specimens white to yellowish, often peeling; stamens 2; fruit a tiny samara, with thin wings. cc. Scales of pistillate catkins woody, 3–5 lobed at the tip, persistent; Alnus bark not white nor yellowish, never peeling; stamens 4;tiny nuts with thick wings. Alnus Miller alder Three of 30 species of alders are found in NS. -
Supplementary Material
Xiang et al., Page S1 Supporting Information Fig. S1. Examples of the diversity of diaspore shapes in Fagales. Fig. S2. Cladogram of Fagales obtained from the 5-marker data set. Fig. S3. Chronogram of Fagales obtained from analysis of the 5-marker data set in BEAST. Fig. S4. Time scale of major fagalean divergence events during the past 105 Ma. Fig. S5. Confidence intervals of expected clade diversity (log scale) according to age of stem group. Fig. S6. Evolution of diaspores types in Fagales with BiSSE model. Fig. S7. Evolution of diaspores types in Fagales with Mk1 model. Fig. S8. Evolution of dispersal modes in Fagales with MuSSE model. Fig. S9. Evolution of dispersal modes in Fagales with Mk1 model. Fig. S10. Reconstruction of pollination syndromes in Fagales with BiSSE model. Fig. S11. Reconstruction of pollination syndromes in Fagales with Mk1 model. Fig. S12. Reconstruction of habitat shifts in Fagales with MuSSE model. Fig. S13. Reconstruction of habitat shifts in Fagales with Mk1 model. Fig. S14. Stratigraphy of fossil fagalean genera. Table S1 Genera of Fagales indicating the number of recognized and sampled species, nut sizes, habits, pollination modes, and geographic distributions. Table S2 List of taxa included in this study, sources of plant material, and GenBank accession numbers. Table S3 Primers used for amplification and sequencing in this study. Table S4 Fossil age constraints utilized in this study of Fagales diversification. Table S5 Fossil fruits reviewed in this study. Xiang et al., Page S2 Table S6 Statistics from the analyses of the various data sets. Table S7 Estimated ages for all families and genera of Fagales using BEAST.