Subcommission on Permian Stratigraphy Annual Report 2012
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Distributions of Extinction Times from Fossil Ages and Tree Topologies: the Example of Some Mid-Permian Synapsid Extinctions Gilles Didier, Michel Laurin
Distributions of extinction times from fossil ages and tree topologies: the example of some mid-Permian synapsid extinctions Gilles Didier, Michel Laurin To cite this version: Gilles Didier, Michel Laurin. Distributions of extinction times from fossil ages and tree topologies: the example of some mid-Permian synapsid extinctions. 2021. hal-03258099v2 HAL Id: hal-03258099 https://hal.archives-ouvertes.fr/hal-03258099v2 Preprint submitted on 20 Sep 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributions of extinction times from fossil ages and tree topologies: the example of some mid-Permian synapsid extinctions Gilles Didier1 and Michel Laurin2 1 IMAG, Univ Montpellier, CNRS, Montpellier, France 2 CR2P (\Centre de Pal´eontologie { Paris"; UMR 7207), CNRS/MNHN/SU, Mus´eumNational d'Histoire Naturelle, Paris, France September 16, 2021 Abstract Given a phylogenetic tree that includes only extinct, or a mix of extinct and extant taxa, where at least some fossil data are available, we present a method to compute the distribution of the extinction time of a given set of taxa under the Fossilized-Birth-Death model. Our approach differs from the previous ones in that it takes into account (i) the possibility that the taxa or the clade considered may diversify before going extinct and (ii) the whole phylogenetic tree to estimate extinction times, whilst previous methods do not consider the diversification process and deal with each branch independently. -
Subcommission on Permian Stratigraphy International
Number 30 June 1997 A NEWSLETTER OF THE SUBCOMMISSION ON PERMIAN STRATIGRAPHY SUBCOMMISSION ON PERMIAN STRATIGRAPHY INTERNATIONAL COMMISSION ON STRATIGRAPHY INTERNATIONAL UNION OF GEOLOGICAL SCIENCES (IUGS) Table of Contents Notes from the SPS Secretary...................................................................................................................-1- Claude Spinosa Note from the SPS Chairman....................................................................................................................-2- Bruce R. Wardlaw Proposed new chronostratigraphic units for the Upper Permian ..............................................................-3- Amos Salvador Comments on Subdivisions of the Permian and a Standard World Scale ................................................-4- Neil W. Archbold and J. Mac Dickins Permian chronostratigraphic subdivisions ................................................................................................-5- Jin Yugan, Bruce R. Wardlaw, Brian F. Glenister and Galina V. Kotlyar The Permian Time-scale ...........................................................................................................................-6- J. B. Waterhouse Sequence Stratigraphy along Aidaralash Creek and the Carboniferous/Permian GSSP ..........................-8- Walter S. Snyder and Dora M. Gallegos Upper Paleozoic Fusulinacean Biostratigraphy of the Southern Urals ...................................................-11- Vladimir I. Davydov, Walter S. Snyder and Claude Spinosa Cordaitalean -
Sedimentology and Biostratigraphy of Bart Reef: a New Mud-Mound Discovered in the Northern Sverdrup Basin, West-Central Ellesmere Island
Sedimentology and Biostratigraphy of Bart Reef: A New Mud-Mound Discovered in the Northern Sverdrup Basin, West-Central Ellesmere Island Michael Wamsteeker* University of Calgary, Calgary, AB [email protected] and Benoit Beauchamp and Charles Henderson University of Calgary, Calgary, AB Summary Lower Permian (Sakmarian-Kungurian) carbonate rocks of the Sverdrup Basin, Canadian Arctic Archipelago, record the initiation of a dramatic cooling of ocean temperature and regional climate.1 Asselian-Sakmarian tropical-like climate cooled episodically to subtropical, temperate and finally polar-like conditions by the Kungurian.2 Cooling is recognized by monitoring changes in fossils, lithology and sedimentary textures within Permian shallow marine strata. While initial cooling during the Sakmarian from tropical to subtropical conditions is undoubtably geologically rapid, the rate of change is currently unknown. Measurement of this rate is currently being investigated by monitoring habitation depth of temperature sensitive tropical fossils on the Asselian-Sakmarian carbonate shelf, while timing is determined using the conodont biostratigraphic zonation developed for the Sverdrup Basin in conjunction with absolute dates on the International Time Scale.3 Fieldwork carried out in Summer 2007 included the first description of a new tract of Asselian mud mounds on the northern margin of the Sverdrup Basin. Contained within the Nansen Formation, this tract has been informally named the Simpson reef tract. This study documents the sedimentology and conodont biostratigraphy of Bart reef; a member of this tract. Spectacular outcrop exposure of reef and off-reef strata has enabled a truely thorough characterization including the correlation of reef and off-reef facies. Conodont biostratigraphic dating of correlative off-reef facies indicate a middle to late Asselian age for Bart reef. -
Distributions of Extinction Times from Fossil Ages and Tree Topologies: the Example of Some Mid-Permian Synapsid Extinctions
bioRxiv preprint doi: https://doi.org/10.1101/2021.06.11.448028; this version posted June 11, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Distributions of extinction times from fossil ages and tree topologies: the example of some mid-Permian synapsid extinctions Gilles Didier1 and Michel Laurin2 1IMAG, Univ Montpellier, CNRS, Montpellier, France 2CR2P (“Centre de Recherches sur la Paléobiodiversité et les Paléoenvironnements”; UMR 7207), CNRS/MNHN/UPMC, Sorbonne Université, Muséum National d’Histoire Naturelle, Paris, France June 11, 2021 Abstract Given a phylogenetic tree of extinct and extant taxa with fossils where the only temporal infor- mation stands in the fossil ages, we devise a method to compute the distribution of the extinction time of a given set of taxa under the Fossilized-Birth-Death model. Our approach differs from the previous ones in that it takes into account the possibility that the taxa or the clade considered may diversify before going extinct, whilst previous methods just rely on the fossil recovery rate to estimate confidence intervals. We assess and compare our new approach with a standard previous one using simulated data. Results show that our method provides more accurate confidence intervals. This new approach is applied to the study of the extinction time of three Permo-Carboniferous synapsid taxa (Ophiacodontidae, Edaphosauridae, and Sphenacodontidae) that are thought to have disappeared toward the end of the Cisuralian, or possibly shortly thereafter. The timing of extinctions of these three taxa and of their component lineages supports the idea that a biological crisis occurred in the late Kungurian/early Roadian. -
Wandrawandian Siltstone, New South Wales: Record of Glaciation?
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Earth and Atmospheric Sciences, Department Papers in the Earth and Atmospheric Sciences of 2007 Lithostratigraphy of the late Early Permian (Kungurian) Wandrawandian Siltstone, New South Wales: Record of glaciation? S. G. Thomas Southern Methodist University, [email protected] Christopher R. Fielding University of Nebraska-Lincoln, [email protected] Tracy D. Frank University of Nebraska-Lincoln, [email protected] Follow this and additional works at: https://digitalcommons.unl.edu/geosciencefacpub Part of the Earth Sciences Commons Thomas, S. G.; Fielding, Christopher R.; and Frank, Tracy D., "Lithostratigraphy of the late Early Permian (Kungurian) Wandrawandian Siltstone, New South Wales: Record of glaciation?" (2007). Papers in the Earth and Atmospheric Sciences. 105. https://digitalcommons.unl.edu/geosciencefacpub/105 This Article is brought to you for free and open access by the Earth and Atmospheric Sciences, Department of at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Papers in the Earth and Atmospheric Sciences by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. Published in Australian Journal of Earth Sciences 54 (2007), pp. 1057–1071; doi: 10.1080/08120090701615717 Copyright © 2007 Geological Society of Australia; published by Taylor & Francis. Used by permission. Submitted March 22, 2006; accepted June 21, 2007. Lithostratigraphy of the late Early Permian (Kungurian) Wandrawandian -
Gondwana Vertebrate Faunas of India: Their Diversity and Intercontinental Relationships
438 Article 438 by Saswati Bandyopadhyay1* and Sanghamitra Ray2 Gondwana Vertebrate Faunas of India: Their Diversity and Intercontinental Relationships 1Geological Studies Unit, Indian Statistical Institute, 203 B. T. Road, Kolkata 700108, India; email: [email protected] 2Department of Geology and Geophysics, Indian Institute of Technology, Kharagpur 721302, India; email: [email protected] *Corresponding author (Received : 23/12/2018; Revised accepted : 11/09/2019) https://doi.org/10.18814/epiiugs/2020/020028 The twelve Gondwanan stratigraphic horizons of many extant lineages, producing highly diverse terrestrial vertebrates India have yielded varied vertebrate fossils. The oldest in the vacant niches created throughout the world due to the end- Permian extinction event. Diapsids diversified rapidly by the Middle fossil record is the Endothiodon-dominated multitaxic Triassic in to many communities of continental tetrapods, whereas Kundaram fauna, which correlates the Kundaram the non-mammalian synapsids became a minor components for the Formation with several other coeval Late Permian remainder of the Mesozoic Era. The Gondwana basins of peninsular horizons of South Africa, Zambia, Tanzania, India (Fig. 1A) aptly exemplify the diverse vertebrate faunas found Mozambique, Malawi, Madagascar and Brazil. The from the Late Palaeozoic and Mesozoic. During the last few decades much emphasis was given on explorations and excavations of Permian-Triassic transition in India is marked by vertebrate fossils in these basins which have yielded many new fossil distinct taxonomic shift and faunal characteristics and vertebrates, significant both in numbers and diversity of genera, and represented by small-sized holdover fauna of the providing information on their taphonomy, taxonomy, phylogeny, Early Triassic Panchet and Kamthi fauna. -
From the Lower Permian of Eastern Europe
Paleontological Research, vol. 9, no. 1, pp. 79–84, April 30, 2005 6 by the Palaeontological Society of Japan A new genus of the family Amblypteridae (Osteichthyes: Actinopterygii) from the Lower Permian of Eastern Europe ARTE´ M M. PROKOFIEV Department of Fishes and Fish-like Vertebrates, Paleontological Institute – PIN, Russian Academy of Sciences, Profsoyuznaya Street, 123, Moscow 117997, Russia (e-mail: [email protected]) Received February 14, 2002; Revised manuscript accepted February 22, 2005 Abstract. A new genus and species of the family Amblypteridae, Tchekardichthys sharovi,fromthe Lower Permian of Eastern Europe (Perm Region of Russia) is described. It can be distinguished from all the known members of the family in the position of the fins and number of fin rays, characters of scalation and cranial roofing bones ornamentation, etc. The newly described taxon apparently lived in estuarine or brackish-water habitats. Key words: actinopterygians, Amblypteridae, Eastern Europe, Lower Permian, new genus and species The elonichthyiform family Amblypteridae is rep- second is situated at the mouth of the Tchekarda resented by five genera and numerous species from River and immediately downstream of the latter, and the Carboniferous to Lower Permian of France, Ger- the third one is situated on the left bank of the Sylva many, Czech Republic, India (Kashmir) and South River 850 m downstream from the mouth of the America, and from the Upper Permian of the Ural Tchekarda River. The specimens described herein are region in Eastern Europe (Agassiz, 1833–1844; Berg, found in the second site. The Tchekarda layers belong 1940; Dunkle and Schaeffer, 1956; Berg et al., 1964; to the Koshelevskaya Formation of the Irenskian Re- Heyler, 1969, 1976, 1997; Beltan, 1978). -
Carbon and Strontium Isotope Stratigraphy of the Permian from Nevada and China: Implications from an Icehouse to Greenhouse Transition
Carbon and strontium isotope stratigraphy of the Permian from Nevada and China: Implications from an icehouse to greenhouse transition Dissertation Presented in Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy in the Graduate School of The Ohio State University By Kate E. Tierney, M.S. Graduate Program in the School of Earth Sciences The Ohio State University 2010 Dissertation Committee: Matthew R. Saltzman, Advisor William I. Ausich Loren Babcock Stig M. Bergström Ola Ahlqvist Copyright by Kate Elizabeth Tierney 2010 Abstract The Permian is one of the most important intervals of earth history to help us understand the way our climate system works. It is an analog to modern climate because during this interval climate transitioned from an icehouse state (when glaciers existed extending to middle latitudes), to a greenhouse state (when there were no glaciers). This climatic amelioration occurred under conditions very similar to those that exist in modern times, including atmospheric CO2 levels and the presence of plants thriving in the terrestrial system. This analog to the modern system allows us to investigate the mechanisms that cause global warming. Scientist have learned that the distribution of carbon between the oceans, atmosphere and lithosphere plays a large role in determining climate and changes in this distribution can be studied by chemical proxies preserved in the rock record. There are two main ways to change the distribution of carbon between these reservoirs. Organic carbon can be buried or silicate minerals in the terrestrial realm can be weathered. These two mechanisms account for the long term changes in carbon concentrations in the atmosphere, particularly important to climate. -
A New Late Permian Burnetiamorph from Zambia Confirms Exceptional
fevo-09-685244 June 19, 2021 Time: 17:19 # 1 ORIGINAL RESEARCH published: 24 June 2021 doi: 10.3389/fevo.2021.685244 A New Late Permian Burnetiamorph From Zambia Confirms Exceptional Levels of Endemism in Burnetiamorpha (Therapsida: Biarmosuchia) and an Updated Paleoenvironmental Interpretation of the Upper Madumabisa Mudstone Formation Edited by: 1 † 2 3,4† Mark Joseph MacDougall, Christian A. Sidor * , Neil J. Tabor and Roger M. H. Smith Museum of Natural History Berlin 1 Burke Museum and Department of Biology, University of Washington, Seattle, WA, United States, 2 Roy M. Huffington (MfN), Germany Department of Earth Sciences, Southern Methodist University, Dallas, TX, United States, 3 Evolutionary Studies Institute, Reviewed by: University of the Witwatersrand, Johannesburg, South Africa, 4 Iziko South African Museum, Cape Town, South Africa Sean P. Modesto, Cape Breton University, Canada Michael Oliver Day, A new burnetiamorph therapsid, Isengops luangwensis, gen. et sp. nov., is described Natural History Museum, on the basis of a partial skull from the upper Madumabisa Mudstone Formation of the United Kingdom Luangwa Basin of northeastern Zambia. Isengops is diagnosed by reduced palatal *Correspondence: Christian A. Sidor dentition, a ridge-like palatine-pterygoid boss, a palatal exposure of the jugal that [email protected] extends far anteriorly, a tall trigonal pyramid-shaped supraorbital boss, and a recess †ORCID: along the dorsal margin of the lateral temporal fenestra. The upper Madumabisa Christian A. Sidor Mudstone Formation was deposited in a rift basin with lithofacies characterized orcid.org/0000-0003-0742-4829 Roger M. H. Smith by unchannelized flow, periods of subaerial desiccation and non-deposition, and orcid.org/0000-0001-6806-1983 pedogenesis, and can be biostratigraphically tied to the upper Cistecephalus Assemblage Zone of South Africa, suggesting a Wuchiapingian age. -
Permian (Artinskian to Wuchapingian) Conodont Biostratigraphy in the Tieqiao Section, Laibin Area, South China
Permian (Artinskian to Wuchapingian) conodont biostratigraphy in the Tieqiao section, Laibin area, South China Y.D. Suna, b*, X.T. Liuc, J.X. Yana, B. Lid, B. Chene, D.P.G. Bondf, M.M. Joachimskib, P.B. Wignallg, X.L. Laia a State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Wuhan, 430074, China b GeoZentrum Nordbayern, Universität Erlangen-Nürnberg, Schlossgarten 5, 91054 Erlangen, Germany c Key Laboratory of Marine Geology and Environment, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, 266071, China d Key Laboratory of Marine Mineral Resources, Guangzhou Marine Geological Survey, Ministry of Land and Resources, Guangzhou, 510075, China e State Key Laboratory of Palaeobiology and Stratigraphy, Nanjing Institute of Geology and Palaeontology, 39 East Beijing Road, Nanjing, 210008, R.P. China f School of Environmental Sciences, University of Hull, Hull HU6 7RX, UK g School of Earth and Environment, University of Leeds, Leeds LS2 9JT, UK *Corresponding authors Email: [email protected] (Y.D. Sun) © 2017, Elsevier. Licensed under the Creative Commons Attribution- NonCommercial-NoDerivatives 4.0 International http://creativecommons.org/ licenses/by-nc-nd/4.0/ 1 Abstract Permian strata from the Tieqiao section (Jiangnan Basin, South China) contain several distinctive conodont assemblages. Early Permian (Cisuralian) assemblages are dominated by the genera Sweetognathus, Pseudosweetognathus and Hindeodus with rare Neostreptognathodus and Gullodus. Gondolellids are absent until the end of the Kungurian stage—in contrast to many parts of the world where gondolellids and Neostreptognathodus are the dominant Kungurian conodonts. A conodont changeover is seen at Tieqiao and coincided with a rise of sea level in the late Kungurian to the early Roadian: the previously dominant sweetognathids were replaced by mesogondolellids. -
Paleozoic Stratigraphy and Petroleum Systems of the Western and Southwestern Deserts of Iraq
GeoArabia, Vol. 3, No. 2, 1998 Paleozoic Stratigraphy and Petroleum Systems, Iraq Gulf PetroLink, Bahrain Paleozoic Stratigraphy and Petroleum Systems of the Western and Southwestern Deserts of Iraq Adnan A.M. Aqrawi Smedvig Technologies ABSTRACT A stratigraphic scheme for the Paleozoic of the Southwestern Desert of Iraq is proposed based upon the review of recently published data from several deep wells in the western part of the country and from outcrops in other regions in Iraq. The main formations are described in terms of facies distribution, probable age, regional thickness, and correlations with the well-reported Paleozoic successions of the adjacent countries (e.g. Jordan and Saudi Arabia), as well as with the Thrust Zone of North Iraq. The Paleozoic depositional and tectonic evolution of the Western and Southwestern Deserts of Iraq, particularly during Cambrian, Ordovician and Silurian, shows marked similarity to those of eastern Jordan and northern Saudi Arabia. However, local lithological variations, which are due to Late Paleozoic Hercynian tectonics, characterize the Upper Paleozoic sequences. The Lower Silurian marine “hot” shale, 65 meters thick in the Akkas-1 well in the Western Desert, is believed to be the main Paleozoic source rock in the Western and Southwestern Deserts. Additional potential source rocks in this region could be the black shales of the Ordovician Khabour Formation, the Upper Devonian to Lower Carboniferous Ora Shale Formation, and the lower shaly beds of the Upper Permian Chia Zairi Formation. The main target reservoirs are of Ordovician, Silurian, Carboniferous and Permian ages. Similar reservoirs have recently been reported for the Western Desert of Iraq, eastern Jordan and northern Saudi Arabia. -
Proposal of Guadalupian and Component Roadian, Wordian And
Permophiles Issue #34 1999 REPORTS Proposal of Guadalupian and Component morphoclines, absolute dates, and paleomagnetics. Roadian, Wordian and Capitanian Stages as International Standards for the Middle Permian Historic Preamble Prolonged deliberation of SPS members culminated in the man- Series dated formal postal vote by Titular (voting) Members that approved subdivision of the Permian System into three series, in ascending Brian F. Glenister order Cisuralian, Guadalupian and Lopingian (Report of Presi- University of Iowa dent Jin Yugan, Permophiles #29, p. 2). The “——usage of the Department of Geology Guadalupian Series and constituent stages, i.e. the Roadian, the Iowa City, IA 52242, USA Wordian and the Capitanian Stage for the middle part of the Per- mian.” was approved unanimously by 15 voting members. Pro- Bruce R. Wardlaw posal of the Guadalupian as a chronostratigraphic unit of series U. S. Geological Survey rank (Girty, 1902) predates any potential competitors by decades 926A National Center (Glenister et al., 1992). Of the three component stages currently Reston, VA 22092-0001, USA recognized, the upper two (Wordian and Capitanian) enjoy com- parable priority. Capitanian was first employed in a Lance L. Lambert lithostratigraphic sense by Richardson (1904) for the massive reef Department of Physics limestones of the Guadalupe Mountains of New Mexico and West Southwest Texas State University Texas, and the Word was used by Udden et al. (1916) for the San Marcos, TX 78666-4616, USA interbedded clastic/carbonate sequence in the adjacent Glass Moun- tains. Both were used in a strictly chronostratigraphic sense first Claude Spinosa by Glenister and Furnish (1961) as substages of the Guadalupian Stage, referenced by their nominal formations and recognized else- Permian Research Institute where through “ammonoid and fusuline faunas”.