The GJA8 Allele Encoding CX50I247M Is a Rare Polymorphism, Not a Cataract-Causing Mutation
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A Comprehensive Analysis of the Expression of Crystallins in Mouse Retina Jinghua Xi Washington University School of Medicine in St
Washington University School of Medicine Digital Commons@Becker Open Access Publications 2003 A comprehensive analysis of the expression of crystallins in mouse retina Jinghua Xi Washington University School of Medicine in St. Louis Rafal Farjo University of Michigan - Ann Arbor Shigeo Yoshida University of Michigan - Ann Arbor Timothy S. Kern Case Western Reserve University Anand Swaroop University of Michigan - Ann Arbor See next page for additional authors Follow this and additional works at: https://digitalcommons.wustl.edu/open_access_pubs Recommended Citation Xi, Jinghua; Farjo, Rafal; Yoshida, Shigeo; Kern, Timothy S.; Swaroop, Anand; and Andley, Usha P., ,"A comprehensive analysis of the expression of crystallins in mouse retina." Molecular Vision.9,. 410-419. (2003). https://digitalcommons.wustl.edu/open_access_pubs/1801 This Open Access Publication is brought to you for free and open access by Digital Commons@Becker. It has been accepted for inclusion in Open Access Publications by an authorized administrator of Digital Commons@Becker. For more information, please contact [email protected]. Authors Jinghua Xi, Rafal Farjo, Shigeo Yoshida, Timothy S. Kern, Anand Swaroop, and Usha P. Andley This open access publication is available at Digital Commons@Becker: https://digitalcommons.wustl.edu/open_access_pubs/1801 Molecular Vision 2003; 9:410-9 <http://www.molvis.org/molvis/v9/a53> © 2003 Molecular Vision Received 28 May 2003 | Accepted 19 August 2003 | Published 28 August 2003 A comprehensive analysis of the expression of crystallins in mouse retina Jinghua Xi,1 Rafal Farjo,3 Shigeo Yoshida,3 Timothy S. Kern,5 Anand Swaroop,3,4 Usha P. Andley1,2 Departments of 1Ophthalmology and Visual Sciences and 2Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. -
Related Macular Degeneration and Cutis Laxa
UvA-DARE (Digital Academic Repository) Genetic studies of age-related macular degeneration Baas, D.C. Publication date 2012 Document Version Final published version Link to publication Citation for published version (APA): Baas, D. C. (2012). Genetic studies of age-related macular degeneration. General rights It is not permitted to download or to forward/distribute the text or part of it without the consent of the author(s) and/or copyright holder(s), other than for strictly personal, individual use, unless the work is under an open content license (like Creative Commons). Disclaimer/Complaints regulations If you believe that digital publication of certain material infringes any of your rights or (privacy) interests, please let the Library know, stating your reasons. In case of a legitimate complaint, the Library will make the material inaccessible and/or remove it from the website. Please Ask the Library: https://uba.uva.nl/en/contact, or a letter to: Library of the University of Amsterdam, Secretariat, Singel 425, 1012 WP Amsterdam, The Netherlands. You will be contacted as soon as possible. UvA-DARE is a service provided by the library of the University of Amsterdam (https://dare.uva.nl) Download date:05 Oct 2021 G������ S������ �� A��-������� M������ D����������� D����������� M������ G������ S������ �� A��-������� | 2012 D�������� C. B��� G������ S������ �� A��-������� M������ D����������� D�������� C. B��� cover.indd 1 31-10-12 08:36 Genetic Studies of Age-related Macular Degeneration Dominique C. Baas Chapter 0.indd 1 23-10-12 19:24 The research described in this thesis was conducted at the Netherlands Institute for Neuroscience (NIN), an institute of the Royal Netherlands Academy of Arts and Sciences, Department of Clinical and Molecular Ophthalmogenetics, Amsterdam, The Netherlands. -
Congenital Cataracts Due to a Novel 2‑Bp Deletion in CRYBA1/A3
1614 MOLECULAR MEDICINE REPORTS 10: 1614-1618, 2014 Congenital cataracts due to a novel 2‑bp deletion in CRYBA1/A3 JING ZHANG1, YANHUA ZHANG1, FANG FANG1, WEIHONG MU1, NING ZHANG2, TONGSHUN XU3 and QINYING CAO1 1Prenatal Diagnosis Center, Shijiazhuang Obstetrics and Gynecology Hospital; 2Department of Cardiology, The Second Hospital of Hebei Medical University; 3Department of Surgery, Shijiazhuang Obstetrics and Gynecology Hospital, Shijiazhuang, Hebei, P.R. China Received September 22, 2013; Accepted April 11, 2014 DOI: 10.3892/mmr.2014.2324 Abstract. Congenital cataracts, which are a clinically and located in the eye lens. The major human crystallins comprise genetically heterogeneous group of eye disorders, lead to 90% of protein in the mature lens and contain two different visual impairment and are a significant cause of blindness superfamilies: the small heat‑shock proteins (α-crystallins) in childhood. A major proportion of the causative mutations and the βγ-crystallins. for congenital cataracts are found in crystallin genes. In the In this study a functional candidate approach was used present study, a novel deletion mutation (c.590-591delAG) in to investigate the known crystallin genes, including CRYAA, exon 6 of CRYBA1/A3 was identified in a large family with CRYAB, CRYBA1/A3, CRYBB1, CRYBB2, CRYGC, CRYGD autosomal dominant congenital cataracts. An increase in and CRYGS, in which a major proportion of the mutations local hydrophobicity was predicted around the mutation site; identified in a large family with congenital cataracts were however, further studies are required to determine the exact found. effect of the mutation on βA1/A3-crystallin structure and function. To the best of our knowledge, this is the first report Subjects and methods of an association between a frameshift mutation in exon 6 of CRYBA1/A3 and congenital cataracts. -
Congenital Eye Disorders Gene Panel
Congenital eye disorders gene panel Contact details Introduction Regional Genetics Service Ocular conditions are highly heterogeneous and show considerable phenotypic overlap. 1 in Levels 4-6, Barclay House 2,500 children in the UK are diagnosed as blind or severely visually impaired by the time they 37 Queen Square reach one year old. As many as half of these cases are likely to be inherited and remain undiagnosed due to the vast number of genes involved in these conditions. Many congenital London, WC1N 3BH eye disorders causing visual impairment or blindness at birth or progressive visual impairment T +44 (0) 20 7762 6888 also include syndromic conditions involving additional metabolic, developmental, physical or F +44 (0) 20 7813 8578 sensory abnormalities. Gene panels offer the enhanced probability of diagnosis as a very large number of genes can be interrogated. Samples required Ocular birth defects include all inheritance modalities. Autosomal dominant and recessive 5ml venous blood in plastic EDTA diseases as well as X-linked dominant and recessive diseases are seen. These conditions can bottles (>1ml from neonates) also be caused by de novo variants. Prenatal testing must be arranged Referrals in advance, through a Clinical Genetics department if possible. Patients presenting with a phenotype appropriate for the requested sub-panel Amniotic fluid or CV samples Referrals will be accepted from clinical geneticists and consultants in ophthalmology. should be sent to Cytogenetics for Prenatal testing dissecting and culturing, with instructions to forward the sample Prenatal diagnosis may be offered as appropriate where pathogenic variants have been to the Regional Molecular Genetics identified in accordance with expected inheritance pattern and where appropriate parental laboratory for analysis testing and counselling has been conducted. -
A Novel Γd-Crystallin Mutation Causes Mild Changes in Protein Properties but Leads to Congenital Coralliform Cataract
Molecular Vision 2009; 15:1521-1529 <http://www.molvis.org/molvis/v15/a162> © 2009 Molecular Vision Received 29 April 2009 | Accepted 3 August 2009 | Published 6 August 2009 A novel γD-crystallin mutation causes mild changes in protein properties but leads to congenital coralliform cataract Li-Yun Zhang,1 Bo Gong,1 Jian-Ping Tong,2 Dorothy Shu-Ping Fan,1 Sylvia Wai-Yee Chiang,1 Dinghua Lou,2 Dennis Shun-Chiu Lam,1 Gary Hin-Fai Yam,1 Chi-Pui Pang1 1Department of Ophthalmology and Visual Sciences, The Chinese University of Hong Kong, Hong Kong, China; 2Department of Ophthalmology, the First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, China Purpose: To identify the genetic lesions for congenital coralliform cataract. Methods: Two Chinese families with autosomal dominant coralliform cataract, 12 affected and 14 unaffected individuals, were recruited. Fifteen known genes associated with autosomal dominant congenital cataract were screened by two-point linkage analysis with gene based single nucleotide polymorphisms and microsatellite markers. Sequence variations were identified. Recombinant FLAG-tagged wild type or mutant γD-crystallin was expressed in human lens epithelial cells and COS-7 cells. Protein solubility and intracellular distribution were analyzed by western blotting and immunofluorescence, respectively. Results: A novel heterozygous change, c.43C>A (R15S) of γD-crystallin (CRYGD) co-segregated with coralliform cataract in one family and a known substitution, c.70C>A (P24T), in the other family. Unaffected family members and 103 unrelated control subjects did not carry these mutations. Similar to the wild type protein, R15S γD-crystallin was detergent soluble and was located in the cytoplasm. -
82314791.Pdf
CORE Metadata, citation and similar papers at core.ac.uk Provided by Elsevier - Publisher Connector Am. J. Hum. Genet. 71:1216–1221, 2002 Report A Nonsense Mutation in CRYBB1 Associated with Autosomal Dominant Cataract Linked to Human Chromosome 22q Donna S. Mackay,1 Olivera B. Boskovska,1 Harry L. S. Knopf,1 Kirsten J. Lampi,3 and Alan Shiels1,2 1Departments of Ophthalmology and Visual Sciences and 2Genetics, Washington University School of Medicine, St. Louis; and 3Department of Oral Molecular Biology, Oregon Health and Science University, Portland Autosomal dominant cataract is a clinically and genetically heterogeneous lens disorder that usually presents as a sight-threatening trait in childhood. Here we have mapped dominant pulverulent cataract to the b-crystallin gene cluster on chromosome 22q11.2. Suggestive evidence of linkage was detected at markers D22S1167 (LOD score [Z] 2.09 at recombination fraction [v] 0) and D22S1154 (Z p 1.39 atv p 0 ), which closely flank the genes for bB1-crystallin (CRYBB1) and bA4-crystallin (CRYBA4). Sequencing failed to detect any nucleotide changes in CRYBA4; however, a GrT transversion in exon 6 of CRYBB1 was found to cosegregate with cataract in the family. This single-nucleotide change was predicted to introduce a translation stop codon at glycine 220 (G220X). Expression of recombinant human bB1-crystallin in bacteria showed that the truncated G220X mutant was significantly less soluble than wild type. This study has identified the first CRYBB1 mutation associated with autosomal dominant cataract in humans. Crystallin genes encode 195% of the water-soluble struc- number of evolutionarily diverse proteins—including tural proteins present in the vertebrate crystalline lens, bacterial spore-coat protein S, slime mold spherulin 3a, accounting for 130% of its mass (for review, see Graw and amphibian epidermis differentiation-specific protein— 1997). -
Novel Mutation in the Γ-S Crystallin Gene Causing Autosomal Dominant Cataract
Molecular Vision 2009; 15:476-481 <http://www.molvis.org/molvis/v15/a48> © 2009 Molecular Vision Received 24 December 2008 | Accepted 27 February 2009 | Published 4 March 2009 Novel mutation in the γ-S crystallin gene causing autosomal dominant cataract Vanita Vanita,1 Jai Rup Singh,1 Daljit Singh,2 Raymonda Varon,3 Karl Sperling3 1Centre for Genetic Disorders, Guru Nanak Dev University, Amritsar, India; 2Dr. Daljit Singh Eye Hospital, Amritsar, India; 3Institute of Human Genetics, Charitè, University Medicine of Berlin, Berlin, Germany Purpose: To identify the underlying genetic defect in a north Indian family with seven members in three-generations affected with bilateral congenital cataract. Methods: Detailed family history and clinical data were recorded. Linkage analysis using fluorescently labeled microsatellite markers for the already known candidate gene loci was performed in combination with mutation screening by bidirectional sequencing. Results: Affected individuals had bilateral congenital cataract. Cataract was of opalescent type with the central nuclear region denser than the periphery. Linkage was excluded for the known cataract candidate gene loci at 1p34–36, 1q21–25 (gap junction protein, alpha 8 [GJA8]), 2q33–36 (crystallin, gamma A [CRYGA], crystallin, gamma B [CRYGB], crystallin, gamma C [CRYGC], crystallin, gamma D [CRYGD], crystallin, beta A2 [CRYBA2]), 3q21–22 (beaded filament structural protein 2, phakinin [BFSP2]), 12q12–14 (aquaporin 0 [AQP0]), 13q11–13 (gap junction protein, alpha 3 [GJA3]), 15q21– 22, 16q22–23 (v-maf musculoaponeurotic fibrosarcoma oncogene homolog [MAF], heat shock transcription factor 4 [HSF4]), 17q11–12 (crystallin, beta A1 [CRYBA1]), 17q24, 21q22.3 (crystallin, alpha A [CRYAA]), and 22q11.2 (crystallin, beta B1 [CRYBB1], crystallin, beta B2 [CRYBB2], crystallin, beta B3 [CRYBB3], crystallin, beta A4 [CRYBA4]). -
Effects of Maternal Immune Activation on Gene Expression Patterns in the Fetal Brain
Citation: Transl Psychiatry (2012) 2, e98, doi:10.1038/tp.2012.24 & 2012 Macmillan Publishers Limited All rights reserved 2158-3188/12 www.nature.com/tp Effects of maternal immune activation on gene expression patterns in the fetal brain KA Garbett1,5, EY Hsiao2,5,SKa´lma´n1,3, PH Patterson2 and K Mirnics1,4 We are exploring the mechanisms underlying how maternal infection increases the risk for schizophrenia and autism in the offspring. Several mouse models of maternal immune activation (MIA) were used to examine the immediate effects of MIA induced by influenza virus, poly(I:C) and interleukin IL-6 on the fetal brain transcriptome. Our results indicate that all three MIA treatments lead to strong and common gene expression changes in the embryonic brain. Most notably, there is an acute and transient upregulation of the a, b and c crystallin gene family. Furthermore, levels of crystallin gene expression are correlated with the severity of MIA as assessed by placental weight. The overall gene expression changes suggest that the response to MIA is a neuroprotective attempt by the developing brain to counteract environmental stress, but at a cost of disrupting typical neuronal differentiation and axonal growth. We propose that this cascade of events might parallel the mechanisms by which environmental insults contribute to the risk of neurodevelopmental disorders such as schizophrenia and autism. Translational Psychiatry (2012) 2, e98; doi:10.1038/tp.2012.24; published online 3 April 2012 Introduction Young and adult mouse MIA offspring10 also exhibit a cerebellar neuropathology that is commonly found in aut- Maternal infection is a risk factor for schizophrenia and ism.11,12 Furthermore, adult mice born to infected mothers autism. -
Clinical and Genetic Characteristics of Chinese Patients with Familial Or
Li et al. Orphanet Journal of Rare Diseases (2018) 13:94 https://doi.org/10.1186/s13023-018-0828-0 RESEARCH Open Access Clinical and genetic characteristics of Chinese patients with familial or sporadic pediatric cataract Jingyan Li1†, Yunji Leng1†, Shirui Han1†, Lulu Yan1, Chaoxia Lu2, Yang Luo1, Xue Zhang1,2*† and Lihua Cao1*† Abstract Background: Pediatric cataract is a clinically and genetically heterogeneous disease which is a significant cause of lifelong visual impairment and treatable blindness. Our study aims to investigate the genotype spectrum in a group of Chinese patients with pediatric cataract. Methods: We enrolled 39 families with pediatric cataract from October 2015 to April 2016. DNA samples of the probands were analyzed by target next-generation sequencing. Variants were validated using Sanger sequencing in the probands and available family members. Results: In our cohort of 39 cases with different types of pediatric cataract, 23 cases were found to harbor putative pathogenic variants in 15 genes: CRYAA, CRYBA1, CRYBA4, CRYBB1, CRYGC, CRYGD, MIP, GCNT2, IARS2, NHS, BCOR, BFSP2, FYCO1, MAF,andPAX6. The mutation detection rates in the familial and sporadic cases were 75 and 47.8%, respectively. Of the 23 causative variants, over half were novel. Conclusions: This is a rare report of systematic mutation screening analysis of pediatric cataract in a comparably large cohort of Chinese patients. Our observations enrich the mutation spectrum of pediatric cataract. Next-generation sequencing provides significant diagnostic information for pediatric cataract cases, especially when considering sporadic and subtle syndromal cases. Keywords: Pediatric cataract, Next-generation sequencing, Variant, Nystagmus Background microphthalmia, or anterior segment dysgenesis [4, 5]. -
Aey2, a New Mutation in the ßb2-Crystallin–Encoding Gene Of
Aey2, a New Mutation in the B2-Crystallin–Encoding Gene of the Mouse Jochen Graw,1 Jana Lo¨ster,1 Dian Soewarto,2 Helmut Fuchs,2 Andre´ Reis,3,4 Eckhard Wolf,5 Rudi Balling,1,6 and Martin Hrabe´ de Angelis2 PURPOSE. During an ethylnitrosourea (ENU) mutagenesis he - and ␥-crystallins form the major part of the water- screen, mice were tested for the occurrence of dominant Tsoluble proteins of the eye lens. The - and ␥-crystallins are cataracts. One particular mutant was found that caused pro- recognized as members of a superfamily and have been con- gressive opacity and was referred to as Aey2. The purpose of sidered for a long time to be present only in the eye and mainly the study was to provide a morphologic description, to map in the ocular lens.1,2 However, just recently, expression of the the mutant gene, and to characterize the underlying molecular B2-crystallin mRNA and protein was reported also in brain lesion. and testis.3 The common characteristic of all - and ␥-crystal- METHODS. Isolated lenses were photographed, and histologic lins is the so-called Greek key motif. Crystallography of bovine sections of the eye were analyzed according to standard pro- B2- and ␥B-crystallins has shown that each of the - and cedures. Linkage analysis was performed using a set of micro- ␥-crystallins is composed of two domains, each of them built satellite markers covering all autosomal chromosomes. cDNA up by two Greek key motifs.4,5 from candidate genes was amplified after reverse transcription It is widely accepted that - and ␥-crystallins evolved in two of lens mRNA. -
Bidirectional Analysis of Cryba4-Crybb1 Nascent Transcription and Nuclear Accumulation of Crybb3 Mrnas in Lens Fibers
Biochemistry and Molecular Biology Bidirectional Analysis of Cryba4-Crybb1 Nascent Transcription and Nuclear Accumulation of Crybb3 mRNAs in Lens Fibers Saima Limi,1 Yilin Zhao,1 Peng Guo,2 Melissa Lopez-Jones,2 Deyou Zheng,1,3,4 Robert H. Singer,2 Arthur I. Skoultchi,5 and Ales Cvekl1,6 1Departments of Genetics, Albert Einstein College of Medicine, Bronx, New York, United States 2Anatomy and Structural Biology, Albert Einstein College of Medicine, Bronx, New York, United States 3Neurology, Albert Einstein College of Medicine, Bronx, New York, United States 4Neuroscience, Albert Einstein College of Medicine, Bronx, New York, United States 5Cell Biology, Albert Einstein College of Medicine, Bronx, New York, United States 6Ophthalmology and Visual Sciences, Albert Einstein College of Medicine, Bronx, New York, United States Correspondence: Ales Cvekl, Oph- PURPOSE. Crystallin gene expression during lens fiber cell differentiation is tightly spatially and thalmology and Visual Sciences, Al- temporally regulated. A significant fraction of mammalian genes is transcribed from adjacent bert Einstein College of Medicine, promoters in opposite directions (‘‘bidirectional’’ promoters). It is not known whether two 1300 Morris Park Avenue, Ullmann proximal genes located on the same allele are simultaneously transcribed. 123, Bronx, New York, NY 10461, USA; METHODS. Mouse lens transcriptome was analyzed for paired genes whose transcriptional start [email protected]. sites are separated by less than 5 kbp to identify coexpressed bidirectional promoter gene Submitted: October 9, 2018 pairs. To probe these transcriptional mechanisms, nascent transcription of Cryba4, Crybb1, Accepted: November 26, 2018 and Crybb3 genes from gene-rich part of chromosome 5 was visualized by RNA fluorescent in situ hybridizations (RNA FISH) in individual lens fiber cell nuclei. -
CRYBA4 (Human) Recombinant Protein (Q01)
CRYBA4 (Human) Recombinant nuclei during development, these crystallins are made Protein (Q01) and then retained throughout life, making them extremely stable proteins. Mammalian lens crystallins Catalog Number: H00001413-Q01 are divided into alpha, beta, and gamma families; beta and gamma crystallins are also considered as a Regulation Status: For research use only (RUO) superfamily. Alpha and beta families are further divided into acidic and basic groups. Seven protein regions exist Product Description: Human CRYBA4 partial ORF ( in crystallins: four homologous motifs, a connecting NP_001877, 96 a.a. - 195 a.a.) recombinant protein with peptide, and N- and C-terminal extensions. GST-tag at N-terminal. Beta-crystallins, the most heterogeneous, differ by the presence of the C-terminal extension (present in the Sequence: basic group, none in the acidic group). Beta-crystallins PAACANHRDSRLTIFEQENFLGKKGELSDDYPSLQAM form aggregates of different sizes and are able to GWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECD self-associate to form dimers or to form heterodimers HHSGDYKHFREWGSHAPTFQVQSIRRIQ with other beta-crystallins. This gene, a beta acidic group member, is part of a gene cluster with beta-B1, Host: Wheat Germ (in vitro) beta-B2, and beta-B3. [provided by RefSeq] Theoretical MW (kDa): 36.74 Applications: AP, Array, ELISA, WB-Re (See our web site product page for detailed applications information) Protocols: See our web site at http://www.abnova.com/support/protocols.asp or product page for detailed protocols Preparation Method: in vitro wheat germ expression system Purification: Glutathione Sepharose 4 Fast Flow Storage Buffer: 50 mM Tris-HCI, 10 mM reduced Glutathione, pH=8.0 in the elution buffer. Storage Instruction: Store at -80°C.