VEGETATION of NEW GUINEA: Its Classification, and Management
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New Fossil Plant Discovery Links Patagonia to New Guinea in a Warmer Past 10 November 2009
New fossil plant discovery links Patagonia to New Guinea in a warmer past 10 November 2009 insect-feeding richness found at the fossil sites. The specimen shown is coalified with light patches of facial leaf cuticle visible overlying coal. Note opposite branching, enlarged lateral leaves, and light-colored amber in foliar resin canals. Credit: Image credit: P. Wilf. Fossil plants are windows to the past, providing us with clues as to what our planet looked like millions of years ago. Not only do fossils tell us which species were present before human-recorded history, but they can provide information about the climate and how and when lineages may have dispersed around the world. Identifying fossil plants can be tricky, however, when plant organs fail to be This is foliage of Papuacedrus prechilensis (Berry) Wilf preserved or when only a few sparse parts can be et al., comb. nov. (Cupressaceae), from the middle found. Eocene Río Pichileufú flora of Río Negro Province, Patagonia, Argentina. The monotypic genus In the November issue of the American Journal of Papuacedrus is today restricted to montane rainforests Botany, Peter Wilf (of Pennsylvania State of New Guinea and the Moluccas, but its scarce fossil University) and his U.S. and Argentine colleagues record includes Tasmania and Antarctica. Wilf et al. published their recent discovery of abundant describe a suite of well-preserved specimens excavated from early and middle Eocene sites in Patagonia, fossilized specimens of a conifer previously known including an immature seed cone attached to foliage with as "Libocedrus" prechilensis found in Argentinean organic preservation, bearing numerous characters Patagonia. -
Extinction, Transoceanic Dispersal, Adaptation and Rediversification
Turnover of southern cypresses in the post-Gondwanan world: Title extinction, transoceanic dispersal, adaptation and rediversification Crisp, Michael D.; Cook, Lyn G.; Bowman, David M. J. S.; Author(s) Cosgrove, Meredith; Isagi, Yuji; Sakaguchi, Shota Citation The New phytologist (2019), 221(4): 2308-2319 Issue Date 2019-03 URL http://hdl.handle.net/2433/244041 © 2018 The Authors. New Phytologist © 2018 New Phytologist Trust; This is an open access article under the terms Right of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. Type Journal Article Textversion publisher Kyoto University Research Turnover of southern cypresses in the post-Gondwanan world: extinction, transoceanic dispersal, adaptation and rediversification Michael D. Crisp1 , Lyn G. Cook2 , David M. J. S. Bowman3 , Meredith Cosgrove1, Yuji Isagi4 and Shota Sakaguchi5 1Research School of Biology, The Australian National University, RN Robertson Building, 46 Sullivans Creek Road, Acton (Canberra), ACT 2601, Australia; 2School of Biological Sciences, The University of Queensland, Brisbane, Qld 4072, Australia; 3School of Natural Sciences, The University of Tasmania, Private Bag 55, Hobart, Tas 7001, Australia; 4Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, Japan; 5Graduate School of Human and Environmental Studies, Kyoto University, Kyoto 606-8501, Japan Summary Author for correspondence: Cupressaceae subfamily Callitroideae has been an important exemplar for vicariance bio- Michael D. Crisp geography, but its history is more than just disjunctions resulting from continental drift. We Tel: +61 2 6125 2882 combine fossil and molecular data to better assess its extinction and, sometimes, rediversifica- Email: [email protected] tion after past global change. -
Plant Boea Hygrometrica That Confers Osmotic and Alkaline Tolerance in Arabidopsis Thaliana
Identification of a Retroelement from the Resurrection Plant Boea hygrometrica That Confers Osmotic and Alkaline Tolerance in Arabidopsis thaliana Yan Zhao1., Tao Xu1., Chun-Ying Shen1, Guang-Hui Xu1, Shi-Xuan Chen1, Li-Zhen Song1,2, Mei-Jing Li1, Li-Li Wang1, Yan Zhu1, Wei-Tao Lv1, Zhi-Zhong Gong3, Chun-Ming Liu2, Xin Deng1* 1 Key Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing, China, 2 Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, China, 3 State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing, China Abstract Functional genomic elements, including transposable elements, small RNAs and non-coding RNAs, are involved in regulation of gene expression in response to plant stress. To identify genomic elements that regulate dehydration and alkaline tolerance in Boea hygrometrica, a resurrection plant that inhabits drought and alkaline Karst areas, a genomic DNA library from B. hygrometrica was constructed and subsequently transformed into Arabidopsis using binary bacterial artificial chromosome (BIBAC) vectors. Transgenic lines were screened under osmotic and alkaline conditions, leading to the identification of Clone L1-4 that conferred osmotic and alkaline tolerance. Sequence analyses revealed that L1-4 contained a 49-kb retroelement fragment from B. hygrometrica, of which only a truncated sequence was present in L1-4 transgenic Arabidopsis plants. Additional subcloning revealed that activity resided in a 2-kb sequence, designated Osmotic and Alkaline Resistance 1 (OAR1). In addition, transgenic Arabidopsis lines carrying an OAR1-homologue also showed similar stress tolerance phenotypes. Physiological and molecular analyses demonstrated that OAR1-transgenic plants exhibited improved photochemical efficiency and membrane integrity and biomarker gene expression under both osmotic and alkaline stresses. -
Studies on New Guinea Moths. 1. Introduction (Lepidoptera)
PROC. ENTOMOL. SOC. WASH. 105(4), 2003, pp. 1034-1042 STUDIES ON NEW GUINEA MOTHS. 1. INTRODUCTION (LEPIDOPTERA) SCOTT E. MILLER, VOJTECH NOVOTNY, AND YVES BASSET (SEM) Department of Systematic Biology, National Museum of Natural History, Smith- sonian Institution, Washington, DC 20560-0105, U.S.A. (e-mail: [email protected]. edu); (VN) Institute of Entomology, Czech Academy of Sciences and Biological Faculty, University of South Bohemia, Branisovska 31, 370 05 Ceske Budejovice, Czech Republic; (YB) Smithsonian Tropical Research Institute, Apartado 2072, Balboa, Ancon, Panama Abstract.•This is the first in a series of papers providing taxonomic data in support of ecological and biogeographic studies of moths in New Guinea. The primary study is an extensive inventory of the caterpillar fauna of a lowland rainforest site near Madang, Papua New Guinea, from 1994•2001. The inventory focused on the Lepidoptera com- munity on 71 woody plant species representing 45 genera and 23 families. During the study, 46,457 caterpillars representing 585 species were sampled, with 19,660 caterpillars representing 441 species reared to adults. This introductory contribution is intended to provide background on the project, including descriptions of the study site, sampling methods, and taxonomic methods. Key Words: Malesia, Papua New Guinea, Lepidoptera, biodiversity, rearing, community ecology A very large portion of tropical biodi- 1992 and 1993 (Basset 1996, Basset et al. versity consists of herbivorous insects, and 1996). This paper represents the first in a among them, Lepidoptera are among the series of papers providing taxonomic doc- most amenable to study. To better under- umentation in support of the broader stud- stand the structure and maintenance of trop- ies, and is intended to provide general back- ical biodiversity, we undertook a series of ground, including descriptions of the study related inventories of Lepidoptera in New site, sampling methods, and taxonomic Guinea. -
Gesneriaceae
Xu et al. Bot Stud (2017) 58:56 DOI 10.1186/s40529-017-0207-5 ORIGINAL ARTICLE Open Access Three new species of Paraboea (Gesneriaceae) from limestone karsts of China based on morphological and molecular evidence Wei‑Bin Xu1, Jing Guo2, Bo Pan1, Meng‑Qi Han3, Yan Liu1* and Kuo‑Fang Chung4* Abstract Background: The limestone karsts of Southeast Asia and South China are a major biodiversity hotspot of global terrestrial biomes. With more than 130 described species, Paraboea has become one of the most characteristic plant groups in the Southeast Asian limestone fora. During the course of extensive feld work on the limestone formations of southern and southwestern China, three unknown species of Paraboea were collected. Results: Molecular phylogenetic analyses based on nuclear ITS and chloroplast trnL-F sequences strongly con‑ frm the placements of the three new species in Paraboea sensu Puglisi et al. (Taxon 65:277–292. https://doi. org/10.12705/652.5, 2016). Moreover, these three novelties can be distinguished from known Paraboea species with distinct morphological characters, further supporting their recognition as new species. Conclusions: With the support of detailed morphological studies and molecular phylogenetic analyses, Paraboea dushanensis, P. sinovietnamica and P. xiangguiensis are recognized as three species new to science. Keywords: Limestone fora, Loxocarpinae, Paraboea dushanensis, Paraboea sinovietnamica, Paraboea xiangguiensis, Sino-Vietnamese limestone karsts (SVLK) Background Malesia as far east as Sulawesi (Middleton et al. 2010). As currently circumscribed, the Asian gesneriad genus Since the last major revision by Xu et al. (2008) in which Paraboea (C.B.Clarke) Ridl. comprises ca. 130 species of 89 species and 5 varieties were recognized, Paraboea has rosulate or caulescent herbs characterized by the abaxi- been expanded to include the ca. -
DNA Barcoding Confirms Polyphagy in a Generalist Moth, Homona Mermerodes (Lepidoptera: Tortricidae)
Molecular Ecology Notes (2007) 7, 549–557 doi: 10.1111/j.1471-8286.2007.01786.x BARCODINGBlackwell Publishing Ltd DNA barcoding confirms polyphagy in a generalist moth, Homona mermerodes (Lepidoptera: Tortricidae) JIRI HULCR,* SCOTT E. MILLER,† GREGORY P. SETLIFF,‡ KAROLYN DARROW,† NATHANIEL D. MUELLER,§ PAUL D. N. HEBERT¶ and GEORGE D. WEIBLEN** *Department of Entomology, Michigan State University, 243 Natural Sciences Building, East Lansing, Michigan 48824, USA, †National Museum of Natural History, Smithsonian Institution, Box 37012, Washington, DC 20013-7012, USA, ‡Department of Entomology, University of Minnesota, 1980 Folwell Avenue, Saint Paul, Minnesota 55108–1095 USA, §Saint Olaf College, 1500 Saint Olaf Avenue, Northfield, MN 55057, USA,¶Department of Integrative Biology, University of Guelph, Guelph, Ontario, Canada N1G2W1, **Bell Museum of Natural History and Department of Plant Biology, University of Minnesota, 220 Biological Sciences Center, 1445 Gortner Avenue, Saint Paul, Minnesota 55108–1095, USA Abstract Recent DNA barcoding of generalist insect herbivores has revealed complexes of cryptic species within named species. We evaluated the species concept for a common generalist moth occurring in New Guinea and Australia, Homona mermerodes, in light of host plant records and mitochondrial cytochrome c oxidase I haplotype diversity. Genetic divergence among H. mermerodes moths feeding on different host tree species was much lower than among several Homona species. Genetic divergence between haplotypes from New Guinea and Australia was also less than interspecific divergence. Whereas molecular species identification methods may reveal cryptic species in some generalist herbivores, these same methods may confirm polyphagy when identical haplotypes are reared from multiple host plant families. A lectotype for the species is designated, and a summarized bibliography and illustrations including male genitalia are provided for the first time. -
Progress on Southeast Asia's Flora Projects
Gardens' Bulletin Singapore 71 (2): 267–319. 2019 267 doi: 10.26492/gbs71(2).2019-02 Progress on Southeast Asia’s Flora projects D.J. Middleton1, K. Armstrong2, Y. Baba3, H. Balslev4, K. Chayamarit5, R.C.K. Chung6, B.J. Conn7, E.S. Fernando8, K. Fujikawa9, R. Kiew6, H.T. Luu10, Mu Mu Aung11, M.F. Newman12, S. Tagane13, N. Tanaka14, D.C. Thomas1, T.B. Tran15, T.M.A. Utteridge16, P.C. van Welzen17, D. Widyatmoko18, T. Yahara14 & K.M. Wong1 1Singapore Botanic Gardens, National Parks Board, 1 Cluny Road, 259569 Singapore [email protected] 2New York Botanical Garden, 2900 Southern Boulevard, Bronx, New York, 10458, USA 3Auckland War Memorial Museum Tāmaki Paenga Hira, Private Bag 92018, Auckland 1142, New Zealand 4Ecoinformatics and Biodiversity, Department of Bioscience, Aarhus University Building 1540, Ny Munkegade 114, Aarhus C DK 8000, Denmark 5The Forest Herbarium, National Park, Wildlife and Plant Conservation Department, 61 Phahonyothin Rd., Chatuchak, Bangkok 10900, Thailand 6Herbarium, Forest Research Institute Malaysia, Kepong, Selangor 52109, Malaysia 7School of Life and Environmental Sciences, University of Sydney, NSW 2006, Australia 8Department of Forest Biological Sciences, College of Forestry & Natural Resources, University of the Philippines - Los Baños, College, 4031 Laguna, Philippines 9Kochi Prefectural Makino Botanical Garden, 4200-6 Godaisan, Kochi, 7818125, Japan 10Southern Institute of Ecology, Vietnam Academy of Science and Technology, 01 Mac Dinh Chi Street, District 1, Ho Chi Minh City, Vietnam 11Forest -
Supporting Information
Supporting Information Mao et al. 10.1073/pnas.1114319109 SI Text BEAST Analyses. In addition to a BEAST analysis that used uniform Selection of Fossil Taxa and Their Phylogenetic Positions. The in- prior distributions for all calibrations (run 1; 144-taxon dataset, tegration of fossil calibrations is the most critical step in molecular calibrations as in Table S4), we performed eight additional dating (1, 2). We only used the fossil taxa with ovulate cones that analyses to explore factors affecting estimates of divergence could be assigned unambiguously to the extant groups (Table S4). time (Fig. S3). The exact phylogenetic position of fossils used to calibrate the First, to test the effect of calibration point P, which is close to molecular clocks was determined using the total-evidence analy- the root node and is the only functional hard maximum constraint ses (following refs. 3−5). Cordaixylon iowensis was not included in in BEAST runs using uniform priors, we carried out three runs the analyses because its assignment to the crown Acrogymno- with calibrations A through O (Table S4), and calibration P set to spermae already is supported by previous cladistic analyses (also [306.2, 351.7] (run 2), [306.2, 336.5] (run 3), and [306.2, 321.4] using the total-evidence approach) (6). Two data matrices were (run 4). The age estimates obtained in runs 2, 3, and 4 largely compiled. Matrix A comprised Ginkgo biloba, 12 living repre- overlapped with those from run 1 (Fig. S3). Second, we carried out two runs with different subsets of sentatives from each conifer family, and three fossils taxa related fi to Pinaceae and Araucariaceae (16 taxa in total; Fig. -
Methods for Measuring Frost Tolerance of Conifers: a Systematic Map
Review Methods for Measuring Frost Tolerance of Conifers: A Systematic Map Anastasia-Ainhoa Atucha Zamkova *, Katherine A. Steele and Andrew R. Smith School of Natural Sciences, Bangor University, Bangor LL57 2UW, Gwynedd, UK; [email protected] (K.A.S.); [email protected] (A.R.S.) * Correspondence: [email protected] Abstract: Frost tolerance is the ability of plants to withstand freezing temperatures without unrecov- erable damage. Measuring frost tolerance involves various steps, each of which will vary depending on the objectives of the study. This systematic map takes an overall view of the literature that uses frost tolerance measuring techniques in gymnosperms, focusing mainly on conifers. Many different techniques have been used for testing, and there has been little change in methodology since 2000. The gold standard remains the field observation study, which, due to its cost, is frequently substituted by other techniques. Closed enclosure freezing tests (all non-field freezing tests) are done using various types of equipment for inducing artificial freezing. An examination of the literature indicates that several factors have to be controlled in order to measure frost tolerance in a manner similar to observation in a field study. Equipment that allows controlling the freezing rate, frost exposure time and thawing rate would obtain results closer to field studies. Other important factors in study design are the number of test temperatures used, the range of temperatures selected and the decrements between the temperatures, which should be selected based on expected frost tolerance of the tissue and species. Citation: Atucha Zamkova, A.-A.; Steele, K.A.; Smith, A.R. -
A Rapid Biodiversity Survey of Papua New Guinea’S Manus and Mussau Islands
A Rapid Biodiversity Survey of Papua New Guinea’s Manus and Mussau Islands edited by Nathan Whitmore Published by: Wildlife Conservation Society Papua New Guinea Program PO BOX 277, Goroka, Eastern Highlands Province PAPUA NEW GUINEA Tel: +675-532-3494 www.wcs.org Editor: Nathan Whitmore. Authors: Ken P. Aplin, Arison Arihafa, Kyle N. Armstrong, Richard Cuthbert, Chris J. Müller, Junior Novera, Stephen J. Richards, William Tamarua, Günther Theischinger, Fanie Venter, and Nathan Whitmore. The Wildlife Conservation Society is a private, not-for-profit organisation exempt from federal income tax under section 501c(3) of the Inland Revenue Code. The opinions expressed in this publication are those of the contributors and do not necessarily reflect those of the Wildlife Conservation Society, the Criticial Ecosystems Partnership Fund, nor the Papua New Guinean Department of Environment or Conservation. Suggested citation: Whitmore N. (editor) 2015. A rapid biodiversity survey of Papua New Guinea’s Manus and Mussau Islands. Wildlife Conservation Society Papua New Guinea Program. Goroka, PNG. ISBN: 978-0-9943203-1-5 Front cover Image: Fanie Venter: cliffs of Mussau. ©2015 Wildlife Conservation Society A rapid biodiversity survey of Papua New Guinea’s Manus and Mussau Islands. Edited by Nathan Whitmore Table of Contents Participants i Acknowledgements iii Organisational profiles iv Letter of support v Foreword vi Executive summary vii Introduction 1 Chapters 1: Plants of Mussau Island 4 2: Butterflies of Mussau Island (Lepidoptera: Rhopalocera) -
Population Size of Two Endangered Vireya Rhododendron Species and Their Surrounding Vegetation on the Top of the Mt
jurnal.krbogor.lipi.go.id Buletin Kebun Raya Vol. 19 No. 1, Januari 2016 [57–66] e-ISSN: 2460-1519 | p-ISSN: 0125-961X Scientific Article POPULATION SIZE OF TWO ENDANGERED VIREYA RHODODENDRON SPECIES AND THEIR SURROUNDING VEGETATION ON THE TOP OF THE MT. RANTEMARIO, SULAWESI Ukuran Populasi Dua Jenis Vireya Rhododendron Berkategori Genting dan Vegetasi Sekitarnya di Puncak Gunung Rantemario, Sulawesi Wiguna Rahman and Andes H. Rozak Cibodas Botanic Garden, Indonesian Institute of Sciences Sindanglaya Cianjur 43253 PO.BOX SDL, West Java, Indonesia * Email: [email protected] Received/Diterima: November 25, 2015; Accepted/Disetujui: January 25, 2016 Abstrak Lima dari 29 jenis Rhododendron di Sulawesi terancam kepunahan dan dua diantaranya termasuk dalam kategori Genting (EN D). Pengamatan di lapangan telah dilakukan untuk menentukan ukuran populasi terkini dari R. eymae dan R. nanophyton var. nanophyton yang berkategori Genting tersebut. Seratus empat puluh plot 2 (masing-masing berukuran 5x5 m ) dibuat pada tujuh transek di kawasan puncak G. Rantemario (3,269–3,445 m dpl), Sulawesi Selatan. Hasil pengukuran berhasil menemukan 318 individu R. eymae dan dua individu R. nanophyton var. nanophyton dalam plot yang dibuat. Berdasarkan data yang diperoleh, ukuran populasi hasil estimasi dari dua jenis Rhododendron tersebut tidak memenuhi kriteria Genting (EN D). Kategori yang lebih tepat untuk dua jenis tersebut yaitu Rawan (VU D2). Pertimbangan perubahan kategori tersebut dijelaskan dalam makalah ini. Semak dan herba yang dominan di puncak G. Rantemario yaitu Leptospermum javanica (IVI=37.08), Eriocaulon truncatum (IVI=34.83), dan Styphelia suaveolens (IVI=24.63). Asosiasi ketiga jenis tumbuhan tersebut dengan dua jenis Rhododendron telah dianalisis. -
Friederich Wohler, Ein Jugendbildniss in Briefen an Hermann Von Meyer
s86 NATURE [APRIL 18, 1901 seem that the author has made out a case for the Board the Bismarck Gebirge up to a height of 3000 ft., in habit of Agriculture taking over his farm and converting it resembling an Australian Xanthorrhcea / Guppy's inter into a national object-lesson. It would be much cheaper, esting Sararanga (Pandanacere) is recorded with an and quite as useful, to have his prescriptions tested on a distribution ; there is a small Palm, Dammera, practical scale in other parts of the country, and this the allied to LicualaJ' whilst among Dicotyledons, Ficus Board of Agriculture and the agricultural colleges might arbuscula, a fig-tree 3 to 6 feet high, may be mentioned. very well arrange to do. The new Hibiscus papuanus is spoken of as possessing Friederich Wohler, Ein Jugendbildniss in Briefen an the most strikingly beautiful flowers in the whole region. H ermann von Meyer. Edited by Georg W. A. Kahl The additions to Rubiacere are considerable, and include baum. Pp. 97· (Leipzig: J. A. Barth, 1900.) Price Dolicholobium Gertrudis with curious dimorphic flowers. M. 2.40. A second species of Bothryocline (Compositre) consider THESE letters were found amongst the Hermann von ably extends the distribution of a genus previously Meyer's bequest to the Munich Academy of Science, and restricted to Africa. In Psychotria myrmecophila, from Prof. Kahlbaum has done well by making them accessible the Bismarck Gebirge, we have a new type of ant-plant to a larger circle in their present form. with curious excavated trifid stipules, which appear to Although A.