Bis-Naphthopyrone Pigments Protect Filamentous Ascomycetes
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A Survey of Fungi at the University of Wisconsin-Waukesha Field Station
University of Wisconsin Milwaukee UWM Digital Commons Field Station Bulletins UWM Field Station Spring 1993 A survey of fungi at the University of Wisconsin- Waukesha Field Station Alan D. Parker University of Wisconsin-Waukesha Follow this and additional works at: https://dc.uwm.edu/fieldstation_bulletins Part of the Forest Biology Commons, and the Zoology Commons Recommended Citation Parker, A.D. 1993 A survey of fungi at the University of Wisconsin-Waukesha Field Station. Field Station Bulletin 26(1): 1-10. This Article is brought to you for free and open access by UWM Digital Commons. It has been accepted for inclusion in Field Station Bulletins by an authorized administrator of UWM Digital Commons. For more information, please contact [email protected]. A Survey of Fungi at the University of Wisconsin-Waukesha Field Station Alan D. Parker Department of Biological Sciences University of Wisconsin-Waukesha Waukesha, Wisconsin 53188 Introduction The University of Wisconsin-Waukesha Field Station was founded in 1967 through the generous gift of a 98 acre farm by Ms. Gertrude Sherman. The facility is located approximately nine miles west of Waukesha on Highway 18, just south of the Waterville Road intersection. The site consists of rolling glacial deposits covered with old field vegetation, 20 acres of xeric oak woods, a small lake with marshlands and bog, and a cold water stream. Other communities are being estab- lished as a result of restoration work; among these are mesic prairie, oak opening, and stands of various conifers. A long-term study of higher fungi and Myxomycetes, primarily from the xeric oak woods, was started in 1978. -
New Markers in the Mycotox Profile
New Markers in the MycoTOX Profile We are happy to announce the addition of four new mycotoxin markers to our MycoTOX Profile. The test now includes 11 mycotoxins from 40 species of mold, making it by far the most comprehensive and competitively priced mycotoxin test available. It also still more sensitive and accurate than other tests available, because we use LC/MS/MS technology. Here is an overview of the four new mycotoxin markers: Gliotoxin Gliotoxin (GTX) is produced by the mold genus Aspergillus. Aspergillus spreads in the environment by releasing conidia which are capable of infiltrating the small alveolar airways of individuals. In order to evade the body’s defenses Aspergillus releases Gliotoxin to inhibit the immune system. One of the targets of Gliotoxin is PtdIns (3,4,5) P3. This results in the downregulation of phagocytic immune defense, which can lead to the exacerbation of polymicrobial infections. Gliotoxin impairs the activation of T-cells and induces apoptosis in monocytes and in monocyte-derived dendritic cells. These impairments can lead to multiple neurological syndromes. Mycophenolic Acid Mycophenolic Acid (MPA) produced by the Penicillium fungus. MPA is an immunosuppressant which inhibits the proliferation of B and T lymphocytes. MPA exposure can increase the risk of opportunistic infections such as Clostridia and Candida. MPA is associated with miscarriage and congenital malformations when the woman is exposed in pregnancy. Dihydrocitrinone Dihydrocitrinone is a metabolite of Citrinin (CTN), which is a mycotoxin that is produced by the mold species Aspergillus, Penicillium, and Monascus. CTN exposure can lead to nephropathy, because of its ability to increase permeability of mitochondrial membranes in the kidneys. -
Fungal Keratitis: Immune Recognition, Neutrophil-Hyphae Interactions, And
FUNGAL KERATITIS: IMMUNE RECOGNITION, NEUTROPHIL-HYPHAE INTERACTIONS, AND FUNGAL ANTI-OXIDATIVE DEFENSES by SIXTO MANUEL LEAL JR. Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy Thesis Advisor: Eric Pearlman, Ph.D. Department of Pathology CASE WESTERN RESERVE UNIVERSITY August, 2012 CASE WESTERN RESERVE UNIVERSITY SCHOOL OF GRADUATE STUDIES We hereby approve the dissertation of ______________________________________________________ candidate for the Ph.D. degree *. (signed)_______________________________________________ (chair of the committee) ________________________________________________ ________________________________________________ ________________________________________________ ________________________________________________ ________________________________________________ (date) _______________________ *We also certify that written approval has been obtained for any proprietary material contained therein. Dedication I dedicate this cumulative work to the invisible hand that has blessed my personal and academic life with incredible people, guidance, talent, courage, perseverance, and productivity. 3 Table of Contents List of Figures 7 List of Tables 9 Acknowledgements 10 List of Abbreviations 12 Abstract 14 Chapter 1. Introduction Fungi in their natural environment 16 Fungi and human disease 18 Fungi that cause human corneal infection 21 Fungal keratitis- Clinical characteristics and outcome 22 Anti-microbial Defenses at the Ocular Surface 23 Immune Recognition of Fungi 27 β2 integrins -
PESTICIDE EVALUATION REPORT and SAFER USE ACTION PLAN(PERSUAP)
PESTICIDE EVALUATION REPORT and SAFER USE ACTION PLAN(PERSUAP) By the USAID Kenya Agricultural Value Chain Enterprises (USAID-KAVES) Project Revised March 2014 This publication was produced for review by the United States Agency for International Development. It was prepared by Fintrac Inc. under contract reference AID-623-C-13-00002 Fintrac Inc. www.fintrac.com [email protected] US Virgin Islands 3077 Kronprindsens Gade 72 St. Thomas, USVI 00802 Tel: (340) 776-7600 Fax: (340) 776-7601 Washington, D.C. 1400 16th Street NW, Suite 400 Washington, D.C. 20036 USA Tel: (202) 462-3304 Fax: (202) 462-8478 USAID-KAVES Karen Office Park 3rd Floor Baobab, Suite H Langata Road, Karen, Nairobi Prepared by Fintrac Inc. USAID-KAVES PERSUAP 3 KENYA AGRICULTURAL VALUE CHAIN ENTERPRISES PROJECT (KAVES) PESTICIDE EVALUATION REPORT and SAFER USE ACTION PLAN (PERSUAP) Revised March 20134 The author’s views expressed in this publication do not necessarily reflect the views of the United States Agency for International Development or the United States government. Photos by Fintrac Inc. and Real IPM. Prepared by Fintrac Inc. INITIAL ENVIRONMENTAL EXAMINATION, AMENDMENTPESTICIDE EVALUATION REPORT AND SAFER USE ACTION PLAN (PERSUAP) FOR USAID/KENYA’S KENYA AGRICULTURAL VALUE CHAIN ENTERPRISES (KAVES) PROJECT CONTRACT NO. AID-623-C-13-00002 PROJECT NAME: Kenya Agricultural Value Chain Enterprises (KAVES) Project REGION/COUNTRY: East Africa/Kenya PROGRAM AREA: 4.5 Agriculture, Feed the Future ORIGINATING OFFICE Agriculture Business and Environment Office CURRENT DATE (as of revisions): March 2014 IEE AMENDMENT: Yes PREPARED BY: Fintrac Inc. IMPLEMENTATION START: January 16, 2013 LOP AMOUNT: $39,810,558 IMPLEMENTATION END: January 15th 2018 Filename & date of original IEE: Kenya_FY09_EconGrowth_IEE_01xx09.doc The purpose of this IEE amendment is to approve the 2013 Pesticide Evaluation Report (PER) and Safer Use Action Plan (SUAP) developed under the KAVES project and which will be used during project implementation. -
An Evolving Phylogenetically Based Taxonomy of Lichens and Allied Fungi
Opuscula Philolichenum, 11: 4-10. 2012. *pdf available online 3January2012 via (http://sweetgum.nybg.org/philolichenum/) An evolving phylogenetically based taxonomy of lichens and allied fungi 1 BRENDAN P. HODKINSON ABSTRACT. – A taxonomic scheme for lichens and allied fungi that synthesizes scientific knowledge from a variety of sources is presented. The system put forth here is intended both (1) to provide a skeletal outline of the lichens and allied fungi that can be used as a provisional filing and databasing scheme by lichen herbarium/data managers and (2) to announce the online presence of an official taxonomy that will define the scope of the newly formed International Committee for the Nomenclature of Lichens and Allied Fungi (ICNLAF). The online version of the taxonomy presented here will continue to evolve along with our understanding of the organisms. Additionally, the subfamily Fissurinoideae Rivas Plata, Lücking and Lumbsch is elevated to the rank of family as Fissurinaceae. KEYWORDS. – higher-level taxonomy, lichen-forming fungi, lichenized fungi, phylogeny INTRODUCTION Traditionally, lichen herbaria have been arranged alphabetically, a scheme that stands in stark contrast to the phylogenetic scheme used by nearly all vascular plant herbaria. The justification typically given for this practice is that lichen taxonomy is too unstable to establish a reasonable system of classification. However, recent leaps forward in our understanding of the higher-level classification of fungi, driven primarily by the NSF-funded Assembling the Fungal Tree of Life (AFToL) project (Lutzoni et al. 2004), have caused the taxonomy of lichen-forming and allied fungi to increase significantly in stability. This is especially true within the class Lecanoromycetes, the main group of lichen-forming fungi (Miadlikowska et al. -
COVER CROPS and SOIL-BORNE FUNGI DANGEROUS TOWARDS the CULTIVATION of SALSIFY (Tragopogon Porrifolius Var
Acta Sci. Pol., Hortorum Cultus 10(2) 2011, 167-181 COVER CROPS AND SOIL-BORNE FUNGI DANGEROUS TOWARDS THE CULTIVATION OF SALSIFY (Tragopogon porrifolius var. sativus (Gaterau) Br.) Elbieta Patkowska, Mirosaw Konopiski University of Life Sciences in Lublin Abstract. Salsify has a remarkable taste and nutritious values. It is a rich source of inulin – a glycoside which has a positive effect on human and animal organisms. The paper pre- sents studies on the species composition of soil-borne fungi infecting the roots of Tragopogon porrifolius var. sativus cultivated with the use of oats, tansy phacelia and spring vetch as cover crops. In a field experiment the cover crops formed abundant green mass before winter and it constituted a natural mulch on the surface of the plough land. It was managed in two ways: 1) mixed with the soil as a result of spring ploughing, or 2) mixed with the soil as a result of pre-winter ploughing. The conventional cultivation of salsify, i.e. without cover crops, constituted the control. The studies established the number and health status of four-week-old salsify seedlings and roots with necrotic signs. A laboratory mycological analysis made it possible to determine the quantitative and qualitative composition of fungi infecting the underground parts of Tragopogon porri- folius var. sativus. The emergences and the proportion of infected salsify seedlings varied and depended on the species of the mulching plant. The smallest number of infected seed- lings was obtained after the mulch with oats, slightly more after the application of spring vetch or tansy phacelia as cover crops, and the most in the control. -
Preliminary Classification of Leotiomycetes
Mycosphere 10(1): 310–489 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/7 Preliminary classification of Leotiomycetes Ekanayaka AH1,2, Hyde KD1,2, Gentekaki E2,3, McKenzie EHC4, Zhao Q1,*, Bulgakov TS5, Camporesi E6,7 1Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan, China 2Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand 3School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand 4Landcare Research Manaaki Whenua, Private Bag 92170, Auckland, New Zealand 5Russian Research Institute of Floriculture and Subtropical Crops, 2/28 Yana Fabritsiusa Street, Sochi 354002, Krasnodar region, Russia 6A.M.B. Gruppo Micologico Forlivese “Antonio Cicognani”, Via Roma 18, Forlì, Italy. 7A.M.B. Circolo Micologico “Giovanni Carini”, C.P. 314 Brescia, Italy. Ekanayaka AH, Hyde KD, Gentekaki E, McKenzie EHC, Zhao Q, Bulgakov TS, Camporesi E 2019 – Preliminary classification of Leotiomycetes. Mycosphere 10(1), 310–489, Doi 10.5943/mycosphere/10/1/7 Abstract Leotiomycetes is regarded as the inoperculate class of discomycetes within the phylum Ascomycota. Taxa are mainly characterized by asci with a simple pore blueing in Melzer’s reagent, although some taxa have lost this character. The monophyly of this class has been verified in several recent molecular studies. However, circumscription of the orders, families and generic level delimitation are still unsettled. This paper provides a modified backbone tree for the class Leotiomycetes based on phylogenetic analysis of combined ITS, LSU, SSU, TEF, and RPB2 loci. In the phylogenetic analysis, Leotiomycetes separates into 19 clades, which can be recognized as orders and order-level clades. -
Ergot Alkaloid Biosynthesis in Aspergillus Fumigatus : Association with Sporulation and Clustered Genes Common Among Ergot Fungi
Graduate Theses, Dissertations, and Problem Reports 2009 Ergot alkaloid biosynthesis in Aspergillus fumigatus : Association with sporulation and clustered genes common among ergot fungi Christine M. Coyle West Virginia University Follow this and additional works at: https://researchrepository.wvu.edu/etd Recommended Citation Coyle, Christine M., "Ergot alkaloid biosynthesis in Aspergillus fumigatus : Association with sporulation and clustered genes common among ergot fungi" (2009). Graduate Theses, Dissertations, and Problem Reports. 4453. https://researchrepository.wvu.edu/etd/4453 This Dissertation is protected by copyright and/or related rights. It has been brought to you by the The Research Repository @ WVU with permission from the rights-holder(s). You are free to use this Dissertation in any way that is permitted by the copyright and related rights legislation that applies to your use. For other uses you must obtain permission from the rights-holder(s) directly, unless additional rights are indicated by a Creative Commons license in the record and/ or on the work itself. This Dissertation has been accepted for inclusion in WVU Graduate Theses, Dissertations, and Problem Reports collection by an authorized administrator of The Research Repository @ WVU. For more information, please contact [email protected]. Ergot alkaloid biosynthesis in Aspergillus fumigatus: Association with sporulation and clustered genes common among ergot fungi Christine M. Coyle Dissertation submitted to the Davis College of Agriculture, Forestry, and Consumer Sciences at West Virginia University in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Genetics and Developmental Biology Daniel G. Panaccione, Ph.D., Chair Kenneth P. Blemings, Ph.D. Joseph B. -
Evasion of Adaptive Immune Defenses by the Lethal
EVASION OF ADAPTIVE IMMUNE DEFENSES BY THE LETHAL CHYTRID FUNGUS BATRACHOCHYTRIUM DENDROBATIDIS By Jeffrey Scott Fites Jr. Dissertation Submitted to the Faculty of the Graduate School of Vanderbilt University in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY in Biological Sciences May, 2014 Nashville, TN Approved: Katherine Friedman, Ph. D., chair Clint Carter, Ph. D. Julián Hillyer, Ph. D. D. Borden Lacy, Ph. D. Louise Rollins-Smith, Ph. D., thesis advisor DEDICATION To my family, My loving wife Meg, My newborn son Peter, My parents Jeff and Robin, And my sister Kateri. ii ACKNOWLEGMENTS I have many people to acknowledge for the achievements I have made in graduate school both personal and academic. I could not have accomplished a paper in Science or completed my Ph. D. thesis work without their assistance and support. I practiced karate for eight years from elementary school through high school. At every promotion to a higher rank, my karate instructor would remind all the students that they did not make achievements alone and that they must “put all their ducks in a row” to thank all the people responsible helping us along our way. He would say that we should start by thanking the oldest living members of our families, our parents, grandparents, and great-grandparents because, “if it wasn’t for our great-grandparents, our grandparents wouldn’t be here; and if it wasn’t for our grandparents, our parents wouldn’t be here; and if it wasn’t for our parents, we wouldn’t be here.” In such fashion, I will begin by thanking my oldest living relatives, my grandparents, Jack and Pauline Fites. -
9B Taxonomy to Genus
Fungus and Lichen Genera in the NEMF Database Taxonomic hierarchy: phyllum > class (-etes) > order (-ales) > family (-ceae) > genus. Total number of genera in the database: 526 Anamorphic fungi (see p. 4), which are disseminated by propagules not formed from cells where meiosis has occurred, are presently not grouped by class, order, etc. Most propagules can be referred to as "conidia," but some are derived from unspecialized vegetative mycelium. A significant number are correlated with fungal states that produce spores derived from cells where meiosis has, or is assumed to have, occurred. These are, where known, members of the ascomycetes or basidiomycetes. However, in many cases, they are still undescribed, unrecognized or poorly known. (Explanation paraphrased from "Dictionary of the Fungi, 9th Edition.") Principal authority for this taxonomy is the Dictionary of the Fungi and its online database, www.indexfungorum.org. For lichens, see Lecanoromycetes on p. 3. Basidiomycota Aegerita Poria Macrolepiota Grandinia Poronidulus Melanophyllum Agaricomycetes Hyphoderma Postia Amanitaceae Cantharellales Meripilaceae Pycnoporellus Amanita Cantharellaceae Abortiporus Skeletocutis Bolbitiaceae Cantharellus Antrodia Trichaptum Agrocybe Craterellus Grifola Tyromyces Bolbitius Clavulinaceae Meripilus Sistotremataceae Conocybe Clavulina Physisporinus Trechispora Hebeloma Hydnaceae Meruliaceae Sparassidaceae Panaeolina Hydnum Climacodon Sparassis Clavariaceae Polyporales Gloeoporus Steccherinaceae Clavaria Albatrellaceae Hyphodermopsis Antrodiella -
Occurrence and Significance of Mycotoxins in Forage Crops And
J Sci Food Agric 1998, 77,1È17 Occurrence and Signiücance of Mycotoxins in Forage Crops and Silage: a Review Keith A Scudamore1* and Christopher T Livesey2 1 Central Science Laboratory, London Road, Slough, Berks, SL3 7HJ, UK 2 Veterinary Laboratories Agency, New Haw, Woodham Lane, Addlestone, Surrey, KT15 3NB, UK (Received 5 December 1996; revised version received 29 May 1997; accepted 4 September 1997) Abstract: Study of mycotoxins in animal feeding stu†s has concentrated on the occurrence of aÑatoxins and, to a lesser extent, other mycotoxins in cereals, raw materials and concentrate feeds. However, ruminant diets contain a high propor- tion of forage crops such as grass or maize silage, hay and straw. Under adverse growing, production or storage conditions, fungal spoilage is likely to occur with some degree of mycotoxin contamination. The mould Ñora of forage crops is likely to di†er signiÐcantly from that of cereals and mycotoxin contamination, should it occur, could di†er qualitatively and quantitatively. Information relating to forage crops as a potential source of mycotoxins is reviewed. Some Ðeld inci- dents and animal disease which may be mycotoxin related are discussed and analytical methods are reviewed. Information on dose and e†ect of candidate mycotoxins is given where available. The review suggests areas which the authors consider merit further study. Crown Copyright 1998. J Sci Food Agric 77,1È17 (1998) Key words: mycotoxins; fungi; moulds; silage; forage crops; hay; straw; occurrence; analysis; risk assessment; animal disease INTRODUCTION access, silage will be at risk from storage moulds such as Penicillium and Aspergillus. However, moulds may be During growth, forage crops are at risk in the Ðeld from aerobic or anaerobic and this means that, even if infection by a number of di†erent fungi, some of which oxygen is excluded, some moulds may be able to may produce mycotoxins. -
Ascomyceteorg 06-05 Ascomyceteorg
Typification of Hymenoscyphus sulphuratus (Ascomycota, Helotiales) Nicolas VAN VOOREN Summary: Hymenoscyphus sulphuratus is an uncommon species growing on conifer litter, but is typically found on Picea abies needles. As with many other historically described species, this name lacks a clearly de- fined type. The purpose of this note is to provide a type which covers all the features that agree with the protologue and our modern interpretation of this name. Keywords: Helotiaceae, conifer needles, neotypification, epitypification. Ascomycete.org, 6 (5) : 154-157. Décembre 2014 Résumé : Hymenoscyphus sulphuratus est une espèce peu commune se développant sur la litière de coni- Mise en ligne le 18/12/2014 fères, typiquement sur aiguilles de Picea abies. Comme d’autres espèces décrites par les auteurs anciens, ce nom manque d’un type clairement défini. L’objectif de cette note est de fournir un type qui couvre tous les caractères en accord avec le protologue et avec notre conception moderne de ce nom. Mots-clés : Helotiaceae, aiguilles de conifère, néotypification, épitypification. Introduction Asci cylindrical, 114–125 × 8–10 μm, 8-spored, apex conical, with an apical ring reacting blue (bb) in IKI without KOH-pretreatment, of the Hymenoscyphus type, occupying only the lower part of the In a previous article (VAN VOOREN & CHEYPE, 2008), a thorough des- apical thickening (which is 2–3 μm thick); base arising from croziers. cription was given off a Hymenoscyphus s.l. species growing on de- Paraphyses numerous, straight, cylindrical, not enlarged at the caying conifer needles, which was identified as Helotium apex (here 2–3 μm wide), hyaline, without visible contents, as long sulphuratum.