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Ecosystem Profile Madagascar and Indian
ECOSYSTEM PROFILE MADAGASCAR AND INDIAN OCEAN ISLANDS FINAL VERSION DECEMBER 2014 This version of the Ecosystem Profile, based on the draft approved by the Donor Council of CEPF was finalized in December 2014 to include clearer maps and correct minor errors in Chapter 12 and Annexes Page i Prepared by: Conservation International - Madagascar Under the supervision of: Pierre Carret (CEPF) With technical support from: Moore Center for Science and Oceans - Conservation International Missouri Botanical Garden And support from the Regional Advisory Committee Léon Rajaobelina, Conservation International - Madagascar Richard Hughes, WWF – Western Indian Ocean Edmond Roger, Université d‘Antananarivo, Département de Biologie et Ecologie Végétales Christopher Holmes, WCS – Wildlife Conservation Society Steve Goodman, Vahatra Will Turner, Moore Center for Science and Oceans, Conservation International Ali Mohamed Soilihi, Point focal du FEM, Comores Xavier Luc Duval, Point focal du FEM, Maurice Maurice Loustau-Lalanne, Point focal du FEM, Seychelles Edmée Ralalaharisoa, Point focal du FEM, Madagascar Vikash Tatayah, Mauritian Wildlife Foundation Nirmal Jivan Shah, Nature Seychelles Andry Ralamboson Andriamanga, Alliance Voahary Gasy Idaroussi Hamadi, CNDD- Comores Luc Gigord - Conservatoire botanique du Mascarin, Réunion Claude-Anne Gauthier, Muséum National d‘Histoire Naturelle, Paris Jean-Paul Gaudechoux, Commission de l‘Océan Indien Drafted by the Ecosystem Profiling Team: Pierre Carret (CEPF) Harison Rabarison, Nirhy Rabibisoa, Setra Andriamanaitra, -
A Molecular Phylogeny of the Lamprophiidae Fitzinger (Serpentes, Caenophidia)
Zootaxa 1945: 51–66 (2008) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA Copyright © 2008 · Magnolia Press ISSN 1175-5334 (online edition) Dissecting the major African snake radiation: a molecular phylogeny of the Lamprophiidae Fitzinger (Serpentes, Caenophidia) NICOLAS VIDAL1,10, WILLIAM R. BRANCH2, OLIVIER S.G. PAUWELS3,4, S. BLAIR HEDGES5, DONALD G. BROADLEY6, MICHAEL WINK7, CORINNE CRUAUD8, ULRICH JOGER9 & ZOLTÁN TAMÁS NAGY3 1UMR 7138, Systématique, Evolution, Adaptation, Département Systématique et Evolution, C. P. 26, Muséum National d’Histoire Naturelle, 43 Rue Cuvier, Paris 75005, France. E-mail: [email protected] 2Bayworld, P.O. Box 13147, Humewood 6013, South Africa. E-mail: [email protected] 3 Royal Belgian Institute of Natural Sciences, Rue Vautier 29, B-1000 Brussels, Belgium. E-mail: [email protected], [email protected] 4Smithsonian Institution, Center for Conservation Education and Sustainability, B.P. 48, Gamba, Gabon. 5Department of Biology, 208 Mueller Laboratory, Pennsylvania State University, University Park, PA 16802-5301 USA. E-mail: [email protected] 6Biodiversity Foundation for Africa, P.O. Box FM 730, Bulawayo, Zimbabwe. E-mail: [email protected] 7 Institute of Pharmacy and Molecular Biotechnology, University of Heidelberg, INF 364, D-69120 Heidelberg, Germany. E-mail: [email protected] 8Centre national de séquençage, Genoscope, 2 rue Gaston-Crémieux, CP5706, 91057 Evry cedex, France. E-mail: www.genoscope.fr 9Staatliches Naturhistorisches Museum, Pockelsstr. 10, 38106 Braunschweig, Germany. E-mail: [email protected] 10Corresponding author Abstract The Elapoidea includes the Elapidae and a large (~60 genera, 280 sp.) and mostly African (including Madagascar) radia- tion termed Lamprophiidae by Vidal et al. -
Ancestral Reconstruction of Diet and Fang Condition in the Lamprophiidae: Implications for the Evolution of Venom Systems in Snakes
Journal of Herpetology, Vol. 55, No. 1, 1–10, 2021 Copyright 2021 Society for the Study of Amphibians and Reptiles Ancestral Reconstruction of Diet and Fang Condition in the Lamprophiidae: Implications for the Evolution of Venom Systems in Snakes 1,2 1 1 HIRAL NAIK, MIMMIE M. KGADITSE, AND GRAHAM J. ALEXANDER 1School of Animal, Plant and Environmental Sciences, University of the Witwatersrand, Johannesburg. PO Wits, 2050, Gauteng, South Africa ABSTRACT.—The Colubroidea includes all venomous and some nonvenomous snakes, many of which have extraordinary dental morphology and functional capabilities. It has been proposed that the ancestral condition of the Colubroidea is venomous with tubular fangs. The venom system includes the production of venomous secretions by labial glands in the mouth and usually includes fangs for effective delivery of venom. Despite significant research on the evolution of the venom system in snakes, limited research exists on the driving forces for different fang and dental morphology at a broader phylogenetic scale. We assessed the patterns of fang and dental condition in the Lamprophiidae, a speciose family of advanced snakes within the Colubroidea, and we related fang and dental condition to diet. The Lamprophiidae is the only snake family that includes front-fanged, rear-fanged, and fangless species. We produced an ancestral reconstruction for the family and investigated the pattern of diet and fangs within the clade. We concluded that the ancestral lamprophiid was most likely rear-fanged and that the shift in dental morphology was associated with changes in diet. This pattern indicates that fang loss, and probably venom loss, has occurred multiple times within the Lamprophiidae. -
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VOLUME 4 ISSUE 1 JUNE 2009 MADAGASCAR CONSERVATION & DEVELOPMENT INVESTING FOR A SUSTAINABLE NATURAL ENVIRONMENT FOR FUTURE GENERATIONS OF HUMANS, ANIMALS AND PLANTS OF MADAGASCAR IN THIS ISSUE Integrating Conservation & Development Spatial Modeling & Human Agencies Alaotra: Fishermen’s Perspectives Mouse Lemur’s Parasite Burden Madagascar Conservation & Development is the journal of Madagascar Wildlife Conservation (MWC) and the Jane Goodall Institute (JGI Switzerland). It is produced in these institutions’ own responsibility. All the Issues and articles are freely available at http://www.mwc-info.net/en/services/journal.htm Contact Journal MCD [email protected] for general inquiries MCD [email protected] for supporting the journal Journal Madagascar Conservation & Development Institute and Museum of Anthropology University of Zurich Winterthurerstrasse 190 CH-8057 Zurich, Switzerland [email protected] for general inquiries Postfach 2701 CH-8021 Zürich, Switzerland Logement 11, Cité Andohaniato Antananarivo 101, Madagascar [email protected] for general inquiries JGI Jane Goodall Institute Schweiz Postfach 2807 8033 Zürich Switzerland MADAGASCAR CONSERVATION & DEVELOPMENT VOLUME 4 | I S S U E 1 — JUNE 2009 PAGE 2 TABLE OF CONTENTS EDITORIAL 2 Madagascar – the only certainty is change. Waeber, P. O. and Wilmé, L. Madagascar – the only 5 Reflections on a changing Madagascar. Robinson, D. certainty is change 7 La Biodiversité, garant de notre bonheur. The political situation witnessed in Madagascar since the begin- Rabenantoandro, J. ning of this year has resulted in major changes in the daily lives 69 Corrigendum of the Malagasy. Besides instability and increased uncertainty, 70 Impressum the population is facing more imminent challenges: increas- ing unemployment, exploding staple food prices, a shortage in SPOTLIGHTS basic food supplies, and a closure of schools, universities and 9 Integrating conservation and development – is it time to financial institutions. -
Reptiles & Amphibians of Kirindy
REPTILES & AMPHIBIANS OF KIRINDY KIRINDY FOREST is a dry deciduous forest covering about 12,000 ha and is managed by the Centre National de Formation, dʹEtudes et de Recherche en Environnement et Foresterie (CNFEREF). Dry deciduous forests are among the world’s most threatened ecosystems, and in Madagascar they have been reduced to 3 per cent of their original extent. Located in Central Menabe, Kirindy forms part of a conservation priority area and contains several locally endemic animal and plant species. Kirindy supports seven species of lemur and Madagascarʹs largest predator, the fossa. Kirindy’s plants are equally notable and include two species of baobab, as well as the Malagasy endemic hazomalany tree (Hazomalania voyroni). Ninety‐nine per cent of Madagascar’s known amphibians and 95% of Madagascar’s reptiles are endemic. Kirindy Forest has around 50 species of reptiles, including 7 species of chameleons and 11 species of snakes. This guide describes the common amphibians and reptiles that you are likely to see during your stay in Kirindy forest and gives some field notes to help towards their identification. The guide is specifically for use on TBA’s educational courses and not for commercial purposes. This guide would not have been possible without the photos and expertise of Marius Burger. Please note this guide is a work in progress. Further contributions of new photos, ids and descriptions to this guide are appreciated. This document was developed during Tropical Biology Association field courses in Kirindy. It was written by Rosie Trevelyan and designed by Brigid Barry, Bonnie Metherell and Monica Frisch. -
A Phylogeny and Revised Classification of Squamata, Including 4161 Species of Lizards and Snakes
BMC Evolutionary Biology This Provisional PDF corresponds to the article as it appeared upon acceptance. Fully formatted PDF and full text (HTML) versions will be made available soon. A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes BMC Evolutionary Biology 2013, 13:93 doi:10.1186/1471-2148-13-93 Robert Alexander Pyron ([email protected]) Frank T Burbrink ([email protected]) John J Wiens ([email protected]) ISSN 1471-2148 Article type Research article Submission date 30 January 2013 Acceptance date 19 March 2013 Publication date 29 April 2013 Article URL http://www.biomedcentral.com/1471-2148/13/93 Like all articles in BMC journals, this peer-reviewed article can be downloaded, printed and distributed freely for any purposes (see copyright notice below). Articles in BMC journals are listed in PubMed and archived at PubMed Central. For information about publishing your research in BMC journals or any BioMed Central journal, go to http://www.biomedcentral.com/info/authors/ © 2013 Pyron et al. This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes Robert Alexander Pyron 1* * Corresponding author Email: [email protected] Frank T Burbrink 2,3 Email: [email protected] John J Wiens 4 Email: [email protected] 1 Department of Biological Sciences, The George Washington University, 2023 G St. -
Comparing Species Tree Estimation with Large
City University of New York (CUNY) CUNY Academic Works Publications and Research College of Staten Island 2015 Comparing species tree estimation with large anchored phylogenomic and small Sanger-sequenced molecular datasets: an empirical study on Malagasy pseudoxyrhophiine snakes Sara Ruane American Museum of Natural History, Central Park West at 79th Street, New York, NY 10024 USA Christopher J. Raxworthy American Museum of Natural History Alan R. Lemmon Florida State University Emily Moriarty Lemmon Florida State University Frank T. Burbrink CUNY College of Staten Island How does access to this work benefit ou?y Let us know! More information about this work at: https://academicworks.cuny.edu/si_pubs/58 Discover additional works at: https://academicworks.cuny.edu This work is made publicly available by the City University of New York (CUNY). Contact: [email protected] Ruane et al. BMC Evolutionary Biology (2015) 15:221 DOI 10.1186/s12862-015-0503-1 RESEARCH ARTICLE Open Access Comparing species tree estimation with large anchored phylogenomic and small Sanger-sequenced molecular datasets: an empirical study on Malagasy pseudoxyrhophiine snakes Sara Ruane1*, Christopher J. Raxworthy1, Alan R. Lemmon2, Emily Moriarty Lemmon2 and Frank T. Burbrink1,3 Abstract Background: Using molecular data generated by high throughput next generation sequencing (NGS) platforms to infer phylogeny is becoming common as costs go down and the ability to capture loci from across the genome goes up. While there is a general consensus that greater numbers of independent loci should result in more robust phylogenetic estimates, few studies have compared phylogenies resulting from smaller datasets for commonly used genetic markers with the large datasets captured using NGS. -
A New Record, with Range Extension, for the Dwarf Chameleon Brookesia Ebenaui Boettger, 1880 from Beantely Forest, North of Madagascar
Herpetology Notes, volume 14: 551-553 (2021) (published online on 18 March 2021) A new record, with range extension, for the dwarf chameleon Brookesia ebenaui Boettger, 1880 from Beantely forest, north of Madagascar Raphali Rodlis Andriantsimanarilafy1,* and Jeanneney Rabearivony2 Madagascar supports 45% (98 out of 217 species) of From February to April 2018, we conducted biodiversity the chameleon worldwide diversity (Uetz et al., 2020). inventories for several classes of vertebrates (e.g., Malagasy chameleons are organised into four genera amphibians, reptiles, birds, lemurs, small mammals and Brookesia, Palleon, Calumma and Furcifer (Glaw, bats) in Bobaomby area, in the northern tip of Madagascar. 2015). Calumma and Furcifer are mostly arboreal, Five study sites were visited (Fig. 1), and each of them although a few taxa (mostly of the latter genus) are was surveyed for seven days. We used three standard known to use low herbaceous vegetation (Raxworthy methods to survey the herpetofauna of each locality: we 1988). Brookesia and Palleon are more terrestrial, set up three 100 m long line(s) of drift fence and pitfall often found within the leaf litter in rainforests and dry traps, performed active (nocturnal and diurnal) searches deciduous forest, climbing into herbaceous vegetation along a 6150 m transect line, and we actively searched and low bushes to roost at night (Glaw et al., 2012). in refuges (Raselimanana, 2008). For each encountered Several new chameleon species have been described animal the following data were recorded: survey date, recently, especially from the Brookesia and Calumma species name, GPS coordinates, altitude, perch height genera (Crottini et al., 2012; Glaw et al., 2012; Prötzel at its first observation, and microhabitat characteristics. -
Squamata: Colubridae)
A REVIEW OF THE MADAGASCAN SNAKE GENERA PSEUDOXYRHOPUS, PARARHADINAEA, AND HETEROLIODON (SQUAMATA: COLUBRIDAE) BY CHRISTOPHER J. RAXWORTHY AND RONALD A. NUSSBAUM MISCELLANEOUS PUBLICATIONS MUSEUM OF ZOOLOGY, UNIVERSITY OF MICHIGAN NO. 182 Ann Ahor, July 30,1994 ISSN 0076-8405 MISCELLANEOUS PUBLICATIONS MUSEUM OF ZOOLOGY, UNIVERSITY OF MICHIGAN NO. 182 The publication of the Museum of Zoology, The University of Michigan, consist primarily of two series-the Occasional Papers and the Miscellaneous Publications. Both series were founded by Dr. Bryant Walker, Mr. Bradshaw H. Swales, and Dr. W.W. Newcornb. Occasion- ally the Museum publishes corltributions outside of these series; beginning in 1990 these are titled Special Publications and arc numbered. All submitted manuscripts receive external re- view. The Miscellaneous Publications, which include monographic studies, papers on field and museum techniques, and other contributions not within the scope of the Occasional Papers, are published separately. It is not intended that they be grouped into volumes. Each number has a title page and, when necessary, a table ofcontents. The Occasional Papers, publication of which was begun in 1913, serve as a medium for original studies based principally upon the collections in the Museum. They are issued sepa- rately. When a sufficient number of pages has been printed to make a volume, a title page, table of contents, and an index are supplied to libraries and individuals on the mailing list for the series. A complete list of publications on Birds, Fishes, Insects, Mammals, Mollusks, Reptiles and Amphibians, and other topics is available. Address inquiries to the Director, Museum of Zool- ogy, The University of Michigan, Ann Arbor, Michigan 48109-1079. -
Table S3.1. Habitat Use of Sampled Snakes. Taxonomic Nomenclature
Table S3.1. Habitat use of sampled snakes. Taxonomic nomenclature follows the current classification indexed in the Reptile Database ( http://www.reptile-database.org/ ). For some species, references may reflect outdated taxonomic status. Individual species are coded for habitat association according to Table 3.1. References for this table are listed below. Habitat use for species without a reference were inferred from sister taxa. Broad Habitat Specific Habit Species Association Association References Acanthophis antarcticus Semifossorial Terrestrial-Fossorial Cogger, 2014 Acanthophis laevis Semifossorial Terrestrial-Fossorial O'Shea, 1996 Acanthophis praelongus Semifossorial Terrestrial-Fossorial Cogger, 2014 Acanthophis pyrrhus Semifossorial Terrestrial-Fossorial Cogger, 2014 Acanthophis rugosus Semifossorial Terrestrial-Fossorial Cogger, 2014 Acanthophis wellsi Semifossorial Terrestrial-Fossorial Cogger, 2014 Achalinus meiguensis Semifossorial Subterranean-Debris Wang et al., 2009 Achalinus rufescens Semifossorial Subterranean-Debris Das, 2010 Acrantophis dumerili Terrestrial Terrestrial Andreone & Luiselli, 2000 Acrantophis madagascariensis Terrestrial Terrestrial Andreone & Luiselli, 2000 Acrochordus arafurae Aquatic-Mixed Intertidal Murphy, 2012 Acrochordus granulatus Aquatic-Mixed Intertidal Lang & Vogel, 2005 Acrochordus javanicus Aquatic-Mixed Intertidal Lang & Vogel, 2005 Acutotyphlops kunuaensis Fossorial Subterranean-Burrower Hedges et al., 2014 Acutotyphlops subocularis Fossorial Subterranean-Burrower Hedges et al., 2014 -
The Amphibians and Reptiles of the Lower Onilahy River Valley, a Temporary Protected Area in Southwest Madagascar
Herpetological Conservation and Biology 4(1):62-79 Submitted: 3 April 2008; Accepted: 12 January 2009 THE AMPHIBIANS AND REPTILES OF THE LOWER ONILAHY RIVER VALLEY, A TEMPORARY PROTECTED AREA IN SOUTHWEST MADAGASCAR 1,2,* 2 3 4 NEIL D'CRUZE , ANNETTE OLSONN , DAVID HENSON , SUNIL KUMAR , 2 AND DAVID EMMETT 1Frontier: The Society for Environmental Exploration, 50-52 Rivington Street, London, EC2A3QP, United Kingdom 2Conservation International, Indo-Burma Program, Phnom Penh, Cambodia 3Conservation Development Centre, PO Box 24010, Nairobi 00502, Kenya 4Natural Resource Ecology Laboratory, Colorado State University, Fort Collins, Colorado 80523-1499, USA *Current address: The World Society for the Protection of Animals, 89 Albert Embankment, London, SE1 7TP, United Kingdom, e-mail: [email protected] Abstract.—We surveyed the Belomotse Forest in southwest Madagascar for amphibians and reptiles. We recorded six amphibian and 55 reptile species by direct sampling and pitfall trapping in the first published survey to focus on this area. Consequently, all of the species found were new records for the area. The most threatened elements of this herpetofauna are the 11 species that appear to be regionally endemic. The 2007 Red List of Threatened Species includes 11 of these species and CITES appendices lists 10 of them. According to the current literature, 8% of the species found at the Belomotse Forest are “gap species” that are previously unknown from the existing system of protected areas in Madagascar. This paper contributes to the current understanding of Malagasy patterns of biodiversity by documenting the composition, geographical, seasonal, and ecological distribution of the herpetofauna in an area within the internationally recognized spiny forest eco-region of south Madagascar. -
Extinction Risks and the Conservation of Madagascar's Reptiles
Extinction Risks and the Conservation of Madagascar’s Reptiles Richard K. B. Jenkins1*, Marcelo F. Tognelli2,3, Philip Bowles2,3, Neil Cox2,3, Jason L. Brown4, Lauren Chan4,5, Franco Andreone6, Alain Andriamazava7, Raphali R. Andriantsimanarilafy8, Mirana Anjeriniaina9, Parfait Bora10, Lee D. Brady11, Elisoa F. Hantalalaina10, Frank Glaw12, Richard A. Griffiths13, Craig Hilton-Taylor1, Michael Hoffmann2,14,15, Vineet Katariya1, Nirhy H. Rabibisoa16, Jeannot Rafanomezantsoa10, Domoina Rakotomalala9, Hery Rakotondravony10, Ny A. Rakotondrazafy10, Johans Ralambonirainy17, Jean-Baptiste Ramanamanjato18, Herilala Randriamahazo19, J. Christian Randrianantoandro8, Harison H. Randrianasolo17, Jasmin E. Randrianirina20, Hiarinirina Randrianizahana21, Achille P. Raselimanana22, Andriambolantsoa Rasolohery10, Fanomezana M. Ratsoavina10,24, Christopher J. Raxworthy23, Eric Robsomanitrandrasana21, Finoana Rollande17, Peter P. van Dijk2, Anne D. Yoder4, Miguel Vences24 1 Global Species Programme, IUCN, Cambridge, United Kingdom, 2 IUCN/CI Biodiversity Assessment Unit, Betty & Gordon Moore Center for Science & Oceans, Conservation International, Arlington, Virginia, United States of America, 3 IUCN Global Species Programme, Gland, Switzerland, 4 Department of Biology, Duke University, Durham, North Carolina, United States of America, 5 W. M. Keck Science Department of Claremont McKenna, Pitzer, and Scripps Colleges, Claremont, California, United States of America, 6 Museo Regionale di Scienze Naturali, Torino, Italy, 7 Ligue pour la Protection de la