Important Features of the Potential Energy Surface of the Methylamine Plus O(1D) Reaction
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The Preparation and Reactions of Certain Quarternary Ammonium And
THE PREPARATION AND REACTIONS OF CERTAIN QUATERNARY AMMONIUM AND RELATED COMPOUNDS By CARL L MICHAELIS A DISSERTATION PRESENTED TO THE GRADUATE COUNCIL OF THE UNIVERSITY OF FLORIDA IN PARTIAL FULFILMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY UNIVERSITY OF FLORIDA August, 1953 ACKNOWLEDGMENTS The author wishes to express his sincere appreci- ation for the valuable assistance and inspiring direction of Dr. George B. Butler. Special thanks are due Dr. and Mrs. Armin Gropp for the help and encouragement in carrying out this investi- gation. The author also wishes to express his appreciation for the assistance and advice so readily given him by his fellow students, graduate and undergraduate alike. \ ii TABLE OF CONTENTS Page ACKNOWLEDGMENTS ii TABLE OF CONTENTS iii INTRODUCTION 1 A. Review of Literature and Statement of Problem 1 EXPERIMENTAL 14 A. General Discussion 14 B. Procedure 18 DISCUSSION . 51 SUMMARY 62 BIBLIOGRAPHY 64 BIOGRAPHICAL ITEMS 66 COMMITTEE REPORT 67 iii INTRODUCTION The need for compounds of good adrenergic blooking activity has been the object of extensive investigation in recent years. In order to get a better idea of the nature of adrenergic blocking activity, it might be best to under- stand first how an adrenergic compound functions. Certain compounds like epinephrine or adrenaline, are powerful agents in stimulating the sympathetic nervous system, that part of the nervous system springing from the thoracic lumbar cord. The substance epinephrine is much like, if not identical to, the substance called sympathin, which is produced at the ending of a nerve in the smooth muscle or gland when a nerve is stimulated. -
Mechanistic Aspects of the Reaction of Oxime Tosylates with Grignard Reagents
University of New Hampshire University of New Hampshire Scholars' Repository Doctoral Dissertations Student Scholarship Spring 1965 MECHANISTIC ASPECTS OF THE REACTION OF OXIME TOSYLATES WITH GRIGNARD REAGENTS STANFORD SALAVATORE PELOSI JR. Follow this and additional works at: https://scholars.unh.edu/dissertation Recommended Citation PELOSI, STANFORD SALAVATORE JR., "MECHANISTIC ASPECTS OF THE REACTION OF OXIME TOSYLATES WITH GRIGNARD REAGENTS" (1965). Doctoral Dissertations. 811. https://scholars.unh.edu/dissertation/811 This Dissertation is brought to you for free and open access by the Student Scholarship at University of New Hampshire Scholars' Repository. It has been accepted for inclusion in Doctoral Dissertations by an authorized administrator of University of New Hampshire Scholars' Repository. For more information, please contact [email protected]. This dissertation has been 65-9084 microfilmed exactly as received PELOSI, Jr., Stanford Salvatore, 1938- MECHANISTIC ASPECTS OF THE REACTION OF OXIME TOSYLATES WITH GRIGNARD REAGENTS. i University of New Hampshire, Ph.D., 1965 ; Chemistry, organic i I i University Microfilms, Inc., Ann Arbor, Michigan i Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. MECHANISTIC ASPECTS OF THE REACTION OF OXIME TOSYLATES WITH GRIGNARD REAGENTS BY STANFORD SALVATORE PELOSI, JR. B. S., Boston College, 1960 A THESIS Submitted to the University of New Hampshire, In Partial Fulfillment of The Requirements for the Degree of Doctor of Philosophy Graduate School Department of Chemistry March, 1965 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. This thesis has been examined .and approved. I | :.c < I ' l Y . 7 1 / 1 / Ctrvi HS Dat Reproduced with permission of the copyright owner. -
Enhanced Isotopic Ratio Outlier Analysis (IROA) Peak Detection and Identification with Ultra-High Resolution GC-Orbitrap/MS
H OH metabolites OH Article Enhanced Isotopic Ratio Outlier Analysis (IROA) Peak Detection and Identification with Ultra-High Resolution GC-Orbitrap/MS: Potential Application for Investigation of Model Organism Metabolomes Yunping Qiu 1 ID , Robyn D. Moir 2, Ian M. Willis 2, Suresh Seethapathy 3, Robert C. Biniakewitz 3 and Irwin J. Kurland 1,* 1 Stable Isotope and Metabolomics Core Facility, Diabetes Center, Department of Medicine, Albert Einstein College of Medicine, Bronx, NY 10461, USA; [email protected] 2 Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, USA; [email protected] (R.D.M.); [email protected] (I.M.W.) 3 Thermo Fisher Scientific, Somerset, NJ 08873, USA; suresh.seethapathy@thermofisher.com (S.S.); [email protected] (R.C.B.) * Correspondence: [email protected]; Tel.: +1-718-678-1091 Received: 7 November 2017; Accepted: 10 January 2018; Published: 18 January 2018 Abstract: Identifying non-annotated peaks may have a significant impact on the understanding of biological systems. In silico methodologies have focused on ESI LC/MS/MS for identifying non-annotated MS peaks. In this study, we employed in silico methodology to develop an Isotopic Ratio Outlier Analysis (IROA) workflow using enhanced mass spectrometric data acquired with the ultra-high resolution GC-Orbitrap/MS to determine the identity of non-annotated metabolites. The higher resolution of the GC-Orbitrap/MS, together with its wide dynamic range, resulted in more IROA peak pairs detected, and increased reliability of chemical formulae generation (CFG). IROA uses two different 13C-enriched carbon sources (randomized 95% 12C and 95% 13C) to produce mirror image isotopologue pairs, whose mass difference reveals the carbon chain length (n), which aids in the identification of endogenous metabolites. -
Is the Reaction Between Formic Acid and Protonated Aminomethanol a Possible Source of Glycine Precursors in the Interstellar Medium?
A&A 579, A125 (2015) Astronomy DOI: 10.1051/0004-6361/201526548 & c ESO 2015 Astrophysics Is the reaction between formic acid and protonated aminomethanol a possible source of glycine precursors in the interstellar medium? Pilar Redondo, Antonio Largo, and Carmen Barrientos Computational Chemistry Group, Departamento de Química Física y Química Inorgánica, Facultad de Ciencias, Universidad de Valladolid, 47011 Valladolid, Spain e-mail: [predondo;alargo;cbb]@qf.uva.es Received 18 May 2015 / Accepted 28 May 2015 ABSTRACT Context. One of the most interesting questions in interstellar chemistry concerns whether we can detect the basic building blocks of proteins in astronomical sources. In ascertaining whether amino acids could be possible interstellar molecules, a crucial point is how they could be synthesized in the interstellar medium. Aims. We do a theoretical study of the ion-molecule reaction involving protonated aminomethanol and formic acid to establish its viability in space. This ion-molecule reaction has been proposed by other authors as a possible way to produce glycine in the interstellar medium. Methods. The relevant stationary points on the potential energy surface of the reaction between protonated aminomethanol and formic acid have been theoretically studied by using ab initio methods. The second-order Moller-Plesset level was employed, in conjunction with the correlation-consistent polarized valence triple-zeta (cc-pVTZ) basis set. In addition, the electronic energies were refined by means of single-point calculations at the CCSD(T) level (coupled cluster single and double excitation model augmented with a non-iterative treatment of triple excitations) on the MP2/cc-pVTZ geometries with the aug-cc-pVTZ basis set. -
Reaction of Several Aminopyrimidines with Formaldehyde Gerald L
JOURNAL OF RESEARCH of the National Bureau of Standards—A. Physics and Chemistry Vol. 66A, No. 1, January-February 1962 Reaction of Several Aminopyrimidines With Formaldehyde Gerald L. McLeod x (August 29, 1961) Formaldehyde has been shown to react with 2-aminopyrimidine (II) and 2-(methyl- amino)pyrimidine (V) at room temperature to give the corresponding methylol derivatives or the corresponding methylenebis(aminopyrimidines). The reaction of formaldehyde with 2-amino-4,6-dichloro-5-methylpyrimidine (VII) and also its failure to react with 2-(dimethylamino)pyrimidine (IX) are cited as evidence that the pyrimidine ring is not involved in the reaction. 1. Introduction methylol structure is supported by infrared analysis. The spectrum of 2-aminopyrimidine has two absorp- A number of investigations have been made on the tion bands near 3,320 and 3,170 cm"11 whichih are melamine-formaldehyde reaction, and several mech- 2 attributed to N—H asymmetric and symmetriy c anisms [1-5] have been suggested. The complex stretching modes [9]; the methylol compoundd, IIIIII, structures of the triamino-l,3,5-triazines made it shows one fairly broad band at 3,225 cm"1. The desirable to study simpler model compounds. A occurrence of both inter- and intra-molecular hydro- logical model compound, 2-amino-l,3,5~triazine (la), gen bonding in III could cause a lowering of the OH has been reported [6-8] not to give the usual amine stretching frequency, allowing it to overlap the reactions because it tautomerizes to the iminoid N—H stretching band. Treatment of the methylol structure (Ib). -
OH and NH Stretching Vibrational Relaxation of Liquid Ethanolamine
Z. Phys. Chem. 225 (2011) 913–926 / DOI 10.1524/zpch.2011.0125 © by Oldenbourg Wissenschaftsverlag, München OH and NH Stretching Vibrational Relaxation of Liquid Ethanolamine ∗ By Stephan Knop, Jörg Lindner, and Peter Vöhringer Lehrstuhl für Molekulare Physikalische Chemie, Institut für Physikalische und Theoretische Chemie, Rheinische Friedrich-Wilhelms-Universität Bonn, Wegelerstraße 12, 53115 Bonn, Germany Dedicated to Prof. Horst Hippler on the occasion of his 65th birthday (Received April 12, 2011; accepted in revised form May 30, 2011) Vibrational Relaxation / Liquid Dynamics / Hydrogen-Bonding / Ultrafast Spectroscopy Femtosecond mid-infrared pump-probe spectroscopy was carried out to obtain information about the dynamics of vibrational energy relaxation in liquid ethanolamine at room temperature and ambient pressure. Through partial deuteration it was possible to disentangle the dynamics resulting from the OH and the NH stretching modes that proceed independently and simultaneously in the hydrogen-bonded liquid following an ultrafast vibrational excitation by a resonant mid-infrared pulse. The OH-stretching vibrational lifetime was determined to be 450 fs while the NH-stretching lifetime was found to be 1.2 ps. This large difference in lifetimes highlights the importance of the hydrogen-donating and the hydrogen-accepting character of the vibrating groups that are engaged in hydrogen-bonding. 1. Introduction Vibrational energy relaxation (VER) in molecular liquids has attracted considerable attention of researchers devoted to exploring condensed phase chemical dynamics. As- sociated molecular liquids have been particularly attractive research targets because the influence of hydrogen bonding (H-bonding) on the timescales and molecular mechan- isms of the various vibrational dynamical phenomena remains until today only partially understood [1–3]. -
Formaldehyde and Methylamine Reactivity in Interstellar Ice Analogues As a Source of Molecular Complexity at Low Temperature V
A&A 549, A40 (2013) Astronomy DOI: 10.1051/0004-6361/201219974 & c ESO 2012 Astrophysics Formaldehyde and methylamine reactivity in interstellar ice analogues as a source of molecular complexity at low temperature V. Vinogradoff, F. Duvernay, G. Danger, P. Theulé, F. Borget, and T. Chiavassa Université d’Aix-Marseille, Laboratoire de Physique des Interactions Ioniques et Moléculaires, UMR CNRS 7345, Centre de St-Jérôme, Avenue Escadrille Normandie-Niemen, 13397 Marseille Cedex 20, France e-mail: [email protected] Received 9 July 2012 / Accepted 24 October 2012 ABSTRACT Context. Laboratory simulations on interstellar or cometary ice analogues are crucial to understand the formation of complex organic molecules that are detected in the interstellar medium (ISM). Results from this work give hints on physical and chemical processes occurring in space and can serve as a benchmark for dedicated space missions. Aims. The aim of this work is to consolidate the knowledge of ice evolution during the star formation process by investigating the influence of thermal reactions as a source of molecular complexity in the ISM. In this study, we are interested in the thermal reactivity between two interstellar molecules, formaldehyde (H2CO) and methylamine (CH3NH2) in water ice analogues. Methods. We used Fourier transform infrared spectroscopy, mass spectrometry, and B3LYP calculations to investigate the thermal reaction between formaldehyde and methylamine (14N and 15N) at low temperature in water ice analogues. Results. We demonstrate that methylamine and formaldehyde quickly react in water ice analogues for astronomically relevant tem- −1 peratures and form N-methylaminomethanol CH3NHCH2OH. The measured activation energy of this reaction, 1:1 ± 0:05 kJ mol (1:8 ± 0:08 kJ mol−1 with methylamine 15N), allows the reaction to proceed in interstellar ices, when the ices are gently warmed, as it occurs in young stellar objects, in photo-dissociation regions, or in comets. -
Reaction of Several Aminopyrimidines with Formaldehyde
JOURNAL OF RESEARCH of the National Bureau of Standards-A. Physics and Chemistry Vol. 66A, No. I, January- February 1962 I Reaction of Several Aminopyrimidines With Formaldehyde Gerald 1. McLeod 1 (August 29, 1961) Formaldehyde has been shown to react with 2-aminopyrimidine (II) a nd 2-(methyl amino)pyrimidine (V) at room temperature to give the corresponding methylol derivatives or the corresponding methylenebis(aminopyrimidines). The reaction of formaldehyde with 2-amino-4,6-dichloro-5-methylpyri rnidine (VII) and also its failure to react with 2-(dimethylamino)pyrimidine (IX) are cited as evidence that the pyrimidine ring is not invol ved in the reaction. 1. Introduction methylol strucLure is supported by infrared analysis. The spectrum of 2-aminopyrimidine has two absorp A number of investigations have been made on the tion bands near 3,320 and 3, 170 em- I which are melamine-formaldehyde reaction, and several mech attributed to N- H asymmetric and ymmetric anisms [1 - 5)2 have been suggested. The complex stretching modes [9] ; the methylol compound, III, structures of the triamino-1,3,5-triazines made it shows one fairly broad band at 3,225 cm- I • The desirable to stud y simpler model com pounds. A occurrence of both inter- and intra-molecular hydro logical model eompound, 2-amino-1 ,3, 5-triazine (Ia), gen bonding in III co uld cause a lowering of the OH has been reported [6-8] not to give the usuld amine stretching frequency, allowing it to overlap the reactions because it tautomerizes to the iminoid N- H stretching band. -
Atmospheric Formation TELTEK
1 Theoretical evaluation of the fate of harmful compounds post emission Claus J. Nielsen Centre for Theoretical and Computational Chemistry (CTCC) Department of Chemistry at the University of Oslo Norway. and Dirk Hoffmann and Hartmut Herrmann Leibniz-Institut für Troposphärenforschung Leipzig, Germany H&E TQP Amine Tel-Tek CCM project frame Kjølnes ring 30, Porsgrunn agreement 256430116 Norway contracts 256430117 and 256430118 Report 2210040-3 Tel-Tek project 2210040 September 2010 2 This page is intentionally left blank 2210040-3-WP2-Final-v2 3 Executive summary The present report presents a systematic survey of the atmospheric chemistry of amines and amine degradation products reported in the literature before August 1, 2010. The report encompasses the current knowledge on gas phase processes, phase transfer processes and aqueous phase processes, and includes best estimates of the atmospheric partitioning, fate and lifetimes of amines and amine degradation products in the Mongstad area. Assuming model estimates of Henry´s Law coefficients to describe equilibrium conditions it is predicted that unsubstituted alkylamines will primarily be oxidized in the gas phase, and that alkanolamines will primarily be oxidized in the atmospheric aqueous phase. Existing theoretical gas phase degradation schemes have been updated for methylamine, dimethylamine and trimethylamine, and the theoretical atmospheric aqueous phase chemistry of dimethylamine (DMA), monoethanolamine (MEA), 2-amino-2-methyl-1-propanol (AMP), methyldiethanolamine (MDEA) and piperazine (PZ) has been developed. The study has uncovered serious gaps in the current knowledge concerning the fate of harmful compounds post emission from amine based CO2 capture plants. In particular the phase transfer processes are associated with large uncertainties. -
Inhibition of DNA Synthesis by Hydroxyurea: Structure-Activity Relationships1
[CANCER RESEARCH 27 Part 1, 535-540, March 1967] Inhibition of DNA Synthesis by Hydroxyurea: Structure-Activity Relationships1 CHARLES W. YOUNG, GERALD SCHOCHETMAN, SADIE HODAS, AND M. EARL BALIS Divisions of Clinical Chemothirapy and Biological Chemistry, Sloan-Ketlering Institute for Cancer Research, New York, New York 10021 SUMMARY allosteric effectors, altering substrate specificity and the rate of The following comix>unds inhibited incorporation of thy- the overall reaction (12, 13). The molecular mechanism by which midine-3H into the DNA of HeLa cells without significantly hydroxyurea inhibits deoxyribonucleotide synthesis is not known. impairing cellular incorjwration of uridine-3H into RNA or Substrate attack is unlikely because the drug does not impair loucine-3H into protein; the}' are listed in order of potency. synthesis of RNA; an attack ui>on the product of the reaction Dihydro.xyurea > jV-methylhydroxyurea > .V-acetylhydroxy- (deoxyribonucleotides) could not be demonstrated in ex|>eriments urea = hydroxyurea = A'-hydroxyguanidine = N-hydroxyure- with cell-free extracts (26). Because of the lack of structural thane = AT-ethylhydroxyurea > 3-phenyl-l-hydroxyurea = analogy between hydroxyurea and ribonucleotides or deoxyribo formamidoxime > Ar-mcthylacetohydroxamic acid = Ar-methyl- nucleotides, competition by the drug for the enzymatic substrate and/or allosteric-effector sites seems improbable. In an effort to hydroxylamine > acetohydroxamio acid. Hydroxylamine, JV-hydroxyglycine amide and 3-phenyl-l-hydroxy-2-thiourea clarify the relationship between molecular structure and inhibi tory activity, we have studied the effects of various hydroxyl- inhibited incori>oration of all three labeled precursors. Methoxy- amine, methoxyurea, and Ar-methylmethoxyurea had no effect amine and hydroxamic acid derivatives u)xjn protein and nucleic acid metabolism in HeLa cells. -
Synthesis of the First Nitrogen-Heterocycles in Interstellar
MNRAS 000,1–16 (2021) Preprint 11 June 2021 Compiled using MNRAS LATEX style file v3.0 Synthesis of the first nitrogen-heterocycles in interstellar ice analogs containing methylamine (CH3NH2) exposed to UV radiation: Formation of trimethylentriamine (TMT, c-(-CH2-NH)3) and hexamethylentetramine (HMT, (CH2)6N4). H. Carrascosa,1¢ C. González Díaz, 1 G. M. Muñoz Caro,1y P. C. Gómez,2 M. L. Sanz, 3 1Centro de Astrobiología (CSIC-INTA), Ctra. de Ajalvir, km 4, Torrejón de Ardoz, 28850 Madrid, Spain 2Dep. Química Física, Fac. Química, Univ. Complutense, 28040 Madrid, Spain 3Department of instrumental analysis and environmental chemistry, IQOG-CSIC, Juan de la Cierva 3, 28006 Madrid, Spain Accepted XXX. Received YYY; in original form ZZZ ABSTRACT Hexamethylentetramine has drawn a lot of attention due to its potential to produce prebiotic species. This work aims to gain a better understanding in the chemical processes concerning methylamine under astrophysically relevant conditions. In particular, this work deeps into the formation of N-heterocycles in interstellar ice analogs exposed to UV radiation, which may lead to the formation of prebiotic species. Experimental simulations of interstellar ice analogs were carried out in ISAC. ISAC is an ultra-high vacuum chamber equipped with a cryostat, where gas and vapour species are frozen forming ice samples. Infrared and ultraviolet spectroscopy were used to monitor the solid phase, and quadrupole mass spectrometry served to measure the composition of the gas phase. The variety of species detected after UV irradiation of ices containing methylamine revealed the presence of 12 species which have been already detected in the ISM, being 4 of them typically classified as complex organic molecules: formamide (HCONH2), methyl cyanide (CH3CN), CH3NH and CH3CHNH. -
Chemical Safety and Waste Management Manual
Chemical Safety and Waste Management Manual University of Alabama at Birmingham Department of Occupational Health & Safety Chemical Safety Division 2002 EDITION 1. INTRODUCTION In a comparatively short time, the University of Alabama at Birmingham has gained significant recognition as a center of excellence for teaching, medical services and research programs. This is a highly commendable achievement and one that could not have been realized without the continued support and dedication of faculty, staff members, and employees. Similar unfailing cooperation and support are necessary for the institution to be equally successful in its development of a comprehensive occupational health and safety program for the protection of University personnel, students, and the surrounding community. An important part of this program is concerned with the safe and prudent handling of chemicals and their proper legal disposal as regulated by the Environmental Protection Agency (EPA) and the Alabama Department of Environmental Management (ADEM). Almost every laboratory and many allied and support personnel at UAB use chemicals in their daily activities. It is the purpose of this manual to describe the operation of the Chemical Safety Program and to provide guidance in establishing safe work practices for the use of chemicals. This program applies to all work operations at this University where employees may be exposed to hazardous substances under normal working conditions or during an emergency. The Chemical Safety and Waste Management Manual combines both the Chemical Hygiene Plan for laboratories and the Hazard Communication Program for maintenance, environmental services, and other support personnel. The Occupational Safety and Health Administration (OSHA) Hazard Communication Standard may be found at : http://www.osha- slc.gov/OshStd_data/1910_1200.html.