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Overview of Native Chicken Breeds in Italy: Conservation Status and Rearing Systems in Use
animals Article Overview of Native Chicken Breeds in Italy: Conservation Status and Rearing Systems in Use Annelisse Castillo 1 , Marta Gariglio 1, Alessandro Franzoni 1, Dominga Soglia 1 , Stefano Sartore 1 , Arianna Buccioni 2 , Federica Mannelli 2 , Martino Cassandro 3 , Filippo Cendron 3 , Cesare Castellini 4 , Alice Cartoni Mancinelli 4, Nicolaia Iaffaldano 5 , Michele Di Iorio 5 , Margherita Marzoni 6 , Sonia Salvucci 6, Silvia Cerolini 7 , Luisa Zaniboni 7 and Achille Schiavone 1,* 1 Dipartimento di Scienze Veterinarie, Università degli Studi di Torino, Largo Paolo Braccini 2, 10095 Grugliasco, Italy; [email protected] (A.C.); [email protected] (M.G.); [email protected] (A.F.); [email protected] (D.S.); [email protected] (S.S.) 2 Dipartimento di Scienze e Tecnologie Agrarie, Alimentari, Ambientali e Forestali, Università di Firenze, Via delle Cascine 5, 50144 Firenze, Italy; arianna.buccioni@unifi.it (A.B.); federica.mannelli@unifi.it (F.M.) 3 Department of Agronomy, Food, Natural Resources, Animals and Environment (DAFNAE), University of Padova, Viale dell’Università 16, 35020 Legnaro, Italy; [email protected] (M.C.); fi[email protected] (F.C.) 4 Dipartimento di Scienze Agrarie, Alimentari e Ambientali, Università di Perugia, Borgo XX Giugno 74, 06121 Perugia, Italy; [email protected] (C.C.); [email protected] (A.C.M.) 5 Dipartimento Agricoltura, Ambiente e Alimenti, Università degli Studi del Molise, Via Francesco De Sanctis, 86100 Campobasso, -
Tesi Finale Dottorato
INDICE GENERALE 1. INTRODUZIONE............................................................................................................................3 1.1. La tracciabilità dei prodotti di origine animale: alcuni elementi.........................................3 1.2. Elementi di genetica molecolare..........................................................................................4 1.2.1. I marcatori genetici.......................................................................................................4 1.2.2. Lo stato di avanzamento nello studio del genoma degli animali di interesse zootecnico...............................................................................................................................6 1.3. Tracciabilità dei prodotti di origine animale e genetica molecolare....................................8 1.4. I prodotti “monorazza”.......................................................................................................10 1.5. Genetica e biochimica del colore del mantello: alcuni elementi........................................16 1.6. Genetica molecolare e colore del mantello........................................................................19 1.6.1. Il gene MC1R nella specie bovina.............................................................................21 1.6.2. Il gene MC1R nella specie suina................................................................................26 1.6.3. Il gene KIT nella specie bovina..................................................................................26 -
Meta-Analysis of Mitochondrial DNA Reveals Several Population
Table S1. Haplogroup distributions represented in Figure 1. N: number of sequences; J: banteng, Bali cattle (Bos javanicus ); G: yak (Bos grunniens ). Other haplogroup codes are as defined previously [1,2], but T combines T, T1’2’3’ and T5 [2] while the T1 count does not include T1a1c1 haplotypes. T1 corresponds to T1a defined by [2] (16050T, 16133C), but 16050C–16133C sequences in populations with a high T1 and a low T frequency were scored as T1 with a 16050C back mutation. Frequencies of I are only given if I1 and I2 have not been differentiated. Average haplogroup percentages were based on balanced representations of breeds. Country, Region Percentages per Haplogroup N Reference Breed(s) T T1 T1c1a1 T2 T3 T4 I1 I2 I J G Europe Russia 58 3.4 96.6 [3] Yaroslavl Istoben Kholmogory Pechora type Red Gorbatov Suksun Yurino Ukrain 18 16.7 72.2 11.1 [3] Ukrainian Whiteheaded Ukrainian Grey Estonia, Byelorussia 12 100 [3] Estonian native Byelorussia Red Finland 31 3.2 96.8 [3] Eastern Finncattle Northern Finncattle Western Finncattle Sweden 38 100.0 [3] Bohus Poll Fjall cattle Ringamala Cattle Swedish Mountain Cattle Swedish Red Polled Swedish Red-and-White Vane Cattle Norway 44 2.3 0.0 0.0 0.0 97.7 [1,4] Blacksided Trondheim Norwegian Telemark Westland Fjord Westland Red Polled Table S1. Cont. Country, Region Percentages per Haplogroup N Reference Breed(s) T T1 T1c1a1 T2 T3 T4 I1 I2 I J G Iceland 12 100.0 [1] Icelandic Denmark 32 100.0 [3] Danish Red (old type) Jutland breed Britain 108 4.2 1.2 94.6 [1,5,6] Angus Galloway Highland Kerry Hereford Jersey White Park Lowland Black-Pied 25 12.0 88.0 [1,4] Holstein-Friesian German Black-Pied C Europe 141 3.5 4.3 92.2 [1,4,7] Simmental Evolene Raetian Grey Swiss Brown Valdostana Pezzata Rossa Tarina Bruna Grey Alpine France 98 1.4 6.6 92.0 [1,4,8] Charolais Limousin Blonde d’Aquitaine Gascon 82.57 Northern Spain 25 4 13.4 [8,9] 1 Albera Alistana Asturia Montana Monchina Pirenaica Pallaresa Rubia Gallega Southern Spain 638 0.1 10.9 3.1 1.9 84.0 [5,8–11] Avileña Berrenda colorado Berrenda negro Cardena Andaluzia Table S1. -
1 Genetic and Productive Characterization of The
ISSN 1330-7142 UDK = 636.2:636.082 GENETIC AND PRODUCTIVE CHARACTERIZATION OF THE BURLINA CATTLE BREED Chiara Dalvit, R. Dal Zotto, M. De Marchi, M. Cassandro Original scientific paper SUMMARY The Burlina (BUR) is a local Italian cattle breed, its main feature is to be a small sized animal well adapted to live in difficult environment such as mountain areas. Nowadays only 350 cows are enrolled in the Italian Herd Book due to its substitution by more productive breeds. This study proposes a phenotypic and genetic characterization of the BUR breed in comparison with Holstein Friesian (HFR) and Brown Swiss (BSW). The comparison of productive traits showed lower production than HFR and BSW as well as longer productive life and more favourable reproductive traits in BUR animals. The genetic analyses, performed by microsatellites markers, showed the high level of heterozygosity and the genetic distinctiveness of BUR. These findings approve the feasibility of a conservation scheme and suggest the profitability of breeding BUR, especially in difficult environment where the low production can be compensated by longevity and the economic loss by the added value of its typical dairy production. Key-words: Burlina cattle breed, genetic characterization, conservation. INTRODUCTION The Burlina (BUR) is local dairy cattle breed reared in North-East Italy; it is a small sized animal with black spotted coat, well adapted to live in difficult environment as marginal mountain areas thank to its good grazing characteristics. BUR is mainly found in the mountain area of Veneto region (Del Bo et al., 2001) where it has always been reared and appreciated by local farmers. -
The Enigmatic Origin of Bovine Mtdna Haplogroup R: Sporadic Interbreeding Or an Independent Event of Bos Primigenius Domestication in Italy?
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by PubMed Central The Enigmatic Origin of Bovine mtDNA Haplogroup R: Sporadic Interbreeding or an Independent Event of Bos primigenius Domestication in Italy? Silvia Bonfiglio1, Alessandro Achilli1,2, Anna Olivieri1, Riccardo Negrini3, Licia Colli3, Luigi Liotta4, Paolo Ajmone-Marsan3, Antonio Torroni1, Luca Ferretti1* 1 Dipartimento di Genetica e Microbiologia, Universita` di Pavia, Pavia, Italy, 2 Dipartimento di Biologia Cellulare e Ambientale, Universita` di Perugia, Perugia, Italy, 3 Istituto di Zootecnica, Universita` Cattolica del Sacro Cuore, Piacenza, Italy, 4 Dipartimento di Morfologia, Biochimica, Fisiologia e Produzioni Animali, Universita` di Messina, Messina, Italy Abstract Background: When domestic taurine cattle diffused from the Fertile Crescent, local wild aurochsen (Bos primigenius) were still numerous. Moreover, aurochsen and introduced cattle often coexisted for millennia, thus providing potential conditions not only for spontaneous interbreeding, but also for pastoralists to create secondary domestication centers involving local aurochs populations. Recent mitochondrial genomes analyses revealed that not all modern taurine mtDNAs belong to the shallow macro-haplogroup T of Near Eastern origin, as demonstrated by the detection of three branches (P, Q and R) radiating prior to the T node in the bovine phylogeny. These uncommon haplogroups represent excellent tools to evaluate if sporadic interbreeding or even additional events of cattle domestication occurred. Methodology: The survey of the mitochondrial DNA (mtDNA) control-region variation of 1,747 bovine samples (1,128 new and 619 from previous studies) belonging to 37 European breeds allowed the identification of 16 novel non-T mtDNAs, which after complete genome sequencing were confirmed as members of haplogroups Q and R. -
Aurochs Genetics, a Cornerstone of European Biodiversity
Aurochs genetics, a cornerstone of European biodiversity Picture: Manolo Uno (c) Staffan Widstrand Authors: • drs. Ronald Goderie (Taurus Foundation); • dr. Johannes A. Lenstra (Utrecht University, Faculty of Veterinary Medicine); • Maulik Upadhyay (pHD Wageningen University); • dr. Richard Crooijmans (Animal Breeding and Genomics Centre, Wageningen University); • ir. Leo Linnartz (Ark Nature) Summary of: Aurochs Genetics, a cornerstone of biodiversity Preface In 2015 a report is written on Aurochs genetics, made possible by a grant from the Dutch Liberty Wildlife fund. This fund provided the Taurus foundation with a grant of EUR 20.000 to conduct genetic research on aurochs and its relation with nowadays so- called ‘primitive’ breeds. This is the summary of that report. This summary shortly describes the current state of affairs, what we do know early 2015 about the aurochs, about domestic cattle and the relationship of aurochs and the primitive breeds used in the Tauros Programme. Nijmegen, December 2015. page 2 Summary of: Aurochs Genetics, a cornerstone of biodiversity Table of contents Preface 2 Table of contents ......................................................................................................... 3 Summary ..................................................................................................................... 4 1 Introduction .......................................................................................................... 6 2 Aurochs: a short description ................................................................................. -
Local Cattle Breeds in Europe Development of Policies and Strategies for Self-Sustaining Breeds
Local cattle breeds in Europe Development of policies and strategies for self-sustaining breeds edited by: Sipke Joost Hiemstra Yvett e de Haas Asko Mäki-Tanila Gustavo Gandini Local cattle breeds in Europe Local cattle breeds in Europe Development of policies and strategies for self-sustaining breeds edited by: Sipke Joost Hiemstra Centre for Genetic Resources, the Netherlands (CGN), Wageningen University and Research Centre, Lelystad, the Netherlands Yvette de Haas Centre for Genetic Resources, the Netherlands (CGN), Wageningen University and Research Centre, Lelystad, the Netherlands Asko Mäki-Tanila MTT Agrifood Research, Joikonen, Finland Gustavo Gandini Department VSA, Faculty of Veterinary Medicine, University of Milan, Milan, Italy Wageningen Academic P u b l i s h e r s This work is subject to copyright. All rights are reserved, whether the whole or part of the material is concerned. Nothing ISBN: 978-90-8686-144-6 from this publication may be translated, e-ISBN: 978-90-8686-697-7 reproduced, stored in a computerised DOI: 10.3921/978-90-8686-697-7 system or published in any form or in any manner, including electronic, mechanical, reprographic or photographic, without prior Photos cover: written permission from the publisher: CGN and INIA Wageningen Academic Publishers P.O. Box 220 Photos breedcases: 6700 AE Wageningen Veeteelt The Netherlands Kerry Cattle Society www.WageningenAcademic.com MTT EURECA Consortium Partners The individual contributions in this publication and any liabilities arising from them remain the responsibility of the First published, 2010 authors. The publisher is not responsible for possible © Wageningen Academic Publishers damages, which could be a result of content The Netherlands, 2010 derived from this publication. -
Analisi Delle Produzioni in Tipi Genetici a Limitata Diffusione
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by DSpace a Parma UNIVERSITA’ DEGLI STUDI DI PARMA Facoltà di Medicina Veterinaria Dipartimento di Scienze Medico-Veterinarie Dottorato in Produzioni Animali, Biotecnologie Veterinarie, Qualità e Sicurezza degli Alimenti XXV ciclo ANALISI DELLE PRODUZIONI IN TIPI GENETICI A LIMITATA DIFFUSIONE Productions analysis in limited size populations Coordinatore Chiar.ma Prof. Paola Superchi Tutor Chiar.mo Prof. Alberto Sabbioni Chiar.ma Prof. Emanuela Zanardi Dottorando Dott. Valerio Paini Anno Accademico 2011/2012 1 INDICE ABSTRACT .......................................................................................................................... 3 PREMESSE........................................................................................................................... 5 Importanza della biodiversità ............................................................................................ 5 Importanza della variabilità genetica................................................................................. 6 Tutela della Biodiversità in Italia e, in particolare, in Emilia Romagna ........................... 7 ATTIVITÀ DEL TRIENNIO DI DOTTORATO ............................................................... 10 Suino Nero di Parma ....................................................................................................... 11 Razza bovina Reggiana .................................................................................................. -
MITOCH553.Pdf
This article appeared in a journal published by Elsevier. The attached copy is furnished to the author for internal non-commercial research and education use, including for instruction at the authors institution and sharing with colleagues. Other uses, including reproduction and distribution, or selling or licensing copies, or posting to personal, institutional or third party websites are prohibited. In most cases authors are permitted to post their version of the article (e.g. in Word or Tex form) to their personal website or institutional repository. Authors requiring further information regarding Elsevier’s archiving and manuscript policies are encouraged to visit: http://www.elsevier.com/copyright Author's personal copy Mitochondrion 11 (2011) 166–175 Contents lists available at ScienceDirect Mitochondrion journal homepage: www.elsevier.com/locate/mito Complete mitochondrial DNA sequence analysis of Bison bison and bison–cattle hybrids: Function and phylogeny Kory C. Douglas a,1, Natalie D. Halbert b,1, Claire Kolenda b,c, Christopher Childers a,d, David L. Hunter e, James N. Derr b,⁎ a Department of Veterinary Integrative Biosciences, Texas A&M University, College Station, TX 77843-4458, USA b Department of Veterinary Pathobiology, Texas A&M University, College Station, TX 77843-4467, USA c Institute for Ageing and Health, Newcastle University Campus for Ageing and Vitality, Newcastle-upon-Tyne, NE4 5PL, England d Department of Biology, Georgetown University, Washington, DC 20057, USA e Turner Enterprises, Inc., 1123 Research Drive, Bozeman, MT 59718-6858, USA article info abstract Article history: Complete mitochondrial DNA (mtDNA) genomes from 43 bison and bison-cattle hybrids were sequenced and Received 5 March 2010 compared with other bovids. -
Testing Scenarios of European Colonization Using Genome-Wide SNP Da
Senczuk et al. Genet Sel Evol (2021) 53:48 https://doi.org/10.1186/s12711-021-00639-w Genetics Selection Evolution RESEARCH ARTICLE Open Access On the origin and diversifcation of Podolian cattle breeds: testing scenarios of European colonization using genome-wide SNP data Gabriele Senczuk1* , Salvatore Mastrangelo2, Paolo Ajmone‑Marsan3, Zsolt Becskei4, Paolo Colangelo5, Licia Colli3, Luca Ferretti6, Taki Karsli7, Hovirag Lancioni8, Emiliano Lasagna9, Donata Marletta10, Christian Persichilli1, Baldassare Portolano2, Francesca M. Sarti9, Elena Ciani11 and Fabio Pilla1 Abstract Background: During the Neolithic expansion, cattle accompanied humans and spread from their domestication centres to colonize the ancient world. In addition, European cattle occasionally intermingled with both indicine cattle and local aurochs resulting in an exclusive pattern of genetic diversity. Among the most ancient European cattle are breeds that belong to the so‑called Podolian trunk, the history of which is still not well established. Here, we used genome‑wide single nucleotide polymorphism (SNP) data on 806 individuals belonging to 36 breeds to reconstruct the origin and diversifcation of Podolian cattle and to provide a reliable scenario of the European colonization, through an approximate Bayesian computation random forest (ABC‑RF) approach. Results: Our results indicate that European Podolian cattle display higher values of genetic diversity indices than both African taurine and Asian indicine breeds. Clustering analyses show that Podolian breeds share close genomic relationships, which suggests a likely common genetic ancestry. Among the simulated and tested scenarios of the colonization of Europe from taurine cattle, the greatest support was obtained for the model assuming at least two waves of difusion. -
A Comparison of Animal-Related Figures in Milk and Meat Production and Economic Revenues from Milk and Animal Sales of Five Dairy Cattle Breeds Reared in Alps Region
Italian Journal of Animal Science ISSN: (Print) (Online) Journal homepage: https://www.tandfonline.com/loi/tjas20 A comparison of animal-related figures in milk and meat production and economic revenues from milk and animal sales of five dairy cattle breeds reared in Alps region Thomas Zanon, Sven König & Matthias Gauly To cite this article: Thomas Zanon, Sven König & Matthias Gauly (2020) A comparison of animal- related figures in milk and meat production and economic revenues from milk and animal sales of five dairy cattle breeds reared in Alps region, Italian Journal of Animal Science, 19:1, 1318-1328, DOI: 10.1080/1828051X.2020.1839361 To link to this article: https://doi.org/10.1080/1828051X.2020.1839361 © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. Published online: 09 Nov 2020. Submit your article to this journal Article views: 304 View related articles View Crossmark data Full Terms & Conditions of access and use can be found at https://www.tandfonline.com/action/journalInformation?journalCode=tjas20 ITALIAN JOURNAL OF ANIMAL SCIENCE 2020, VOL. 19, NO. 1, 1318–1328 https://doi.org/10.1080/1828051X.2020.1839361 PAPER A comparison of animal-related figures in milk and meat production and economic revenues from milk and animal sales of five dairy cattle breeds reared in Alps region Thomas Zanona, Sven Konig€ b and Matthias Gaulya aFacolta di Scienze e Tecnologie, Free University of Bolzano, Bolzano, Italy; bInstitut fur€ Tierzucht und Haustiergenetik, Justus-Liebig University Giessen, Giessen, Germany ABSTRACT ARTICLE HISTORY The objective of this study was to compare animal-related figures in milk and meat production Received 12 May 2020 and economic revenues from milk and animal sales over the last decade of the five most-com- Revised 30 June 2020 mon dairy cattle breeds in South Tyrol. -
Caratterizzazione Genetica Di Diverse Razze Bovine Tramite Un Set Di 128 Snps DNA Fingerprinting of Different Cattle Breeds Using a Set of 128 Snps
Caratterizzazione genetica di diverse razze bovine tramite un set di 128 SNPs DNA fingerprinting of different cattle breeds using a set of 128 SNPs A. Pozzi1, S. Arabi1, C. Previtali1, R. Capoferri1, A. Galli2, M. Montedoro1 e G. Bongioni1 1 Istituto Sperimentale Italiano “L. Spallanzani” Rivolta d’Adda (Cremona), IT [email protected] 2 CREA Centro di ricerca Zootecnia e Acquacoltura (Lodi, IT) L’Italia grazie alla sua storia, alle sue tradizioni ed alla tipologia del territorio è un Paese particolarmente ricco di biodiversità: si contano oltre 200 razze zootecniche adattatesi nei secoli a produrre in ambienti diversificati per clima e vegetazione. La conservazione della biodiversità delle specie zootecniche è universalmente riconosciuta come una priorità importante, sia per aspetti ecologici, sociali e culturali, sia per il mantenimento del territorio, delle comunità rurali e delle tradizioni. La ricerca in ambito genetico-molecolare e le innovazioni tecnologiche possono essere un valido strumento a tutela della biodiversità. Oggetto di questo studio è stata la caratterizzazione di 20 razze bovine presenti in Italia, al fine di valutarne la diversità genetica tramite approccio molecolare, con l’utilizzo di un chip a 128 SNPs su piattaforma Open Array: 88 SNPs sono stati individuati nel pannello proposto per ISAG Bovine Comparison Test 2011 e, i restanti 40, nel database dbSNP dell’NCBI. Complessivamente sono stati analizzati 513 soggetti appartenenti alle 20 razze (25 campioni per razza) di seguito elencate: Bruna Alpina, Frisona, Valdostana Pezzata Rossa, Pezzata Rossa Italiana, Piemontese, Reggiana, Rendena, Grigia, Pinzgauer, Jersey, Valdostana Pezzata Nera, Charolaise, Marchigiana, Chianina, Limousine, Romagnola, Castana, Blue Belga, Montbeillarde, Blonde d’Aquitaine.