I. Algal Origin: Many Scientists Believe That Pteridophytes Have Originated from Algae, Though They Are Not Unanimous About the Type of Ancestral Algae
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Embryophytic Sporophytes in the Rhynie and Windyfield Cherts
Transactions of the Royal Society of Edinburgh: Earth Sciences http://journals.cambridge.org/TRE Additional services for Transactions of the Royal Society of Edinburgh: Earth Sciences: Email alerts: Click here Subscriptions: Click here Commercial reprints: Click here Terms of use : Click here Embryophytic sporophytes in the Rhynie and Windyeld cherts Dianne Edwards Transactions of the Royal Society of Edinburgh: Earth Sciences / Volume 94 / Issue 04 / December 2003, pp 397 - 410 DOI: 10.1017/S0263593300000778, Published online: 26 July 2007 Link to this article: http://journals.cambridge.org/abstract_S0263593300000778 How to cite this article: Dianne Edwards (2003). Embryophytic sporophytes in the Rhynie and Windyeld cherts. Transactions of the Royal Society of Edinburgh: Earth Sciences, 94, pp 397-410 doi:10.1017/S0263593300000778 Request Permissions : Click here Downloaded from http://journals.cambridge.org/TRE, IP address: 131.251.254.13 on 25 Feb 2014 Transactions of the Royal Society of Edinburgh: Earth Sciences, 94, 397–410, 2004 (for 2003) Embryophytic sporophytes in the Rhynie and Windyfield cherts Dianne Edwards ABSTRACT: Brief descriptions and comments on relationships are given for the seven embryo- phytic sporophytes in the cherts at Rhynie, Aberdeenshire, Scotland. They are Rhynia gwynne- vaughanii Kidston & Lang, Aglaophyton major D. S. Edwards, Horneophyton lignieri Barghoorn & Darrah, Asteroxylon mackiei Kidston & Lang, Nothia aphylla Lyon ex Høeg, Trichopherophyton teuchansii Lyon & Edwards and Ventarura lyonii Powell, Edwards & Trewin. The superb preserva- tion of the silica permineralisations produced in the hot spring environment provides remarkable insights into the anatomy of early land plants which are not available from compression fossils and other modes of permineralisation. -
Is Chloroplastic Class IIA Aldolase a Marine Enzyme&Quest;
The ISME Journal (2016) 10, 2767–2772 © 2016 International Society for Microbial Ecology All rights reserved 1751-7362/16 www.nature.com/ismej SHORT COMMUNICATION Is chloroplastic class IIA aldolase a marine enzyme? Hitoshi Miyasaka1, Takeru Ogata1, Satoshi Tanaka2, Takeshi Ohama3, Sanae Kano4, Fujiwara Kazuhiro4,7, Shuhei Hayashi1, Shinjiro Yamamoto1, Hiro Takahashi5, Hideyuki Matsuura6 and Kazumasa Hirata6 1Department of Applied Life Science, Sojo University, Kumamoto, Japan; 2The Kansai Electric Power Co., Environmental Research Center, Keihanna-Plaza, Kyoto, Japan; 3School of Environmental Science and Engineering, Kochi University of Technology, Kochi, Japan; 4Chugai Technos Corporation, Hiroshima, Japan; 5Graduate School of Horticulture, Faculty of Horticulture, Chiba University, Chiba, Japan and 6Environmental Biotechnology Laboratory, Graduate School of Pharmaceutical Sciences, Osaka University, Osaka, Japan Expressed sequence tag analyses revealed that two marine Chlorophyceae green algae, Chlamydo- monas sp. W80 and Chlamydomonas sp. HS5, contain genes coding for chloroplastic class IIA aldolase (fructose-1, 6-bisphosphate aldolase: FBA). These genes show robust monophyly with those of the marine Prasinophyceae algae genera Micromonas, Ostreococcus and Bathycoccus, indicating that the acquisition of this gene through horizontal gene transfer by an ancestor of the green algal lineage occurred prior to the divergence of the core chlorophytes (Chlorophyceae and Treboux- iophyceae) and the prasinophytes. The absence of this gene in some freshwater chlorophytes, such as Chlamydomonas reinhardtii, Volvox carteri, Chlorella vulgaris, Chlorella variabilis and Coccomyxa subellipsoidea, can therefore be explained by the loss of this gene somewhere in the evolutionary process. Our survey on the distribution of this gene in genomic and transcriptome databases suggests that this gene occurs almost exclusively in marine algae, with a few exceptions, and as such, we propose that chloroplastic class IIA FBA is a marine environment-adapted enzyme. -
JUDD W.S. Et. Al. (2002) Plant Systematics: a Phylogenetic Approach. Chapter 7. an Overview of Green
UNCORRECTED PAGE PROOFS An Overview of Green Plant Phylogeny he word plant is commonly used to refer to any auto- trophic eukaryotic organism capable of converting light energy into chemical energy via the process of photosynthe- sis. More specifically, these organisms produce carbohydrates from carbon dioxide and water in the presence of chlorophyll inside of organelles called chloroplasts. Sometimes the term plant is extended to include autotrophic prokaryotic forms, especially the (eu)bacterial lineage known as the cyanobacteria (or blue- green algae). Many traditional botany textbooks even include the fungi, which differ dramatically in being heterotrophic eukaryotic organisms that enzymatically break down living or dead organic material and then absorb the simpler products. Fungi appear to be more closely related to animals, another lineage of heterotrophs characterized by eating other organisms and digesting them inter- nally. In this chapter we first briefly discuss the origin and evolution of several separately evolved plant lineages, both to acquaint you with these important branches of the tree of life and to help put the green plant lineage in broad phylogenetic perspective. We then focus attention on the evolution of green plants, emphasizing sev- eral critical transitions. Specifically, we concentrate on the origins of land plants (embryophytes), of vascular plants (tracheophytes), of 1 UNCORRECTED PAGE PROOFS 2 CHAPTER SEVEN seed plants (spermatophytes), and of flowering plants dons.” In some cases it is possible to abandon such (angiosperms). names entirely, but in others it is tempting to retain Although knowledge of fossil plants is critical to a them, either as common names for certain forms of orga- deep understanding of each of these shifts and some key nization (e.g., the “bryophytic” life cycle), or to refer to a fossils are mentioned, much of our discussion focuses on clade (e.g., applying “gymnosperms” to a hypothesized extant groups. -
A Taxonomic Reassessment of Chlamydomonas Meslinii (Volvocales, Chlorophyceae) with a Description of Paludistella Gen.Nov
Phytotaxa 432 (1): 065–080 ISSN 1179-3155 (print edition) https://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2020 Magnolia Press Article ISSN 1179-3163 (online edition) https://doi.org/10.11646/phytotaxa.432.1.6 A taxonomic reassessment of Chlamydomonas meslinii (Volvocales, Chlorophyceae) with a description of Paludistella gen.nov. HANI SUSANTI1,6, MASAKI YOSHIDA2, TAKESHI NAKAYAMA2, TAKASHI NAKADA3,4 & MAKOTO M. WATANABE5 1Life Science Innovation, School of Integrative and Global Major, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki, 305-8577, Japan. 2Faculty of Life and Environmental Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba 305-8577, Japan. 3Institute for Advanced Biosciences, Keio University, Tsuruoka, Yamagata, 997-0052, Japan. 4Systems Biology Program, Graduate School of Media and Governance, Keio University, Fujisawa, Kanagawa, 252-8520, Japan. 5Algae Biomass Energy System Development and Research Center, University of Tsukuba. 6Research Center for Biotechnology, Indonesian Institute of Sciences, Jl. Raya Bogor KM 46 Cibinong West Java, Indonesia. Corresponding author: [email protected] Abstract Chlamydomonas (Volvocales, Chlorophyceae) is a large polyphyletic genus that includes numerous species that should be classified into independent genera. The present study aimed to examine the authentic strain of Chlamydomonas meslinii and related strains based on morphological and molecular data. All the strains possessed an asteroid chloroplast with a central pyrenoid and hemispherical papilla; however, they were different based on cell and stigmata shapes. Molecular phylogenetic analyses based on 18S rDNA, atpB, and psaB indicated that the strains represented a distinct subclade in the clade Chloromonadinia. The secondary structure of ITS-2 supported the separation of the strains into four species. -
The Symbiotic Green Algae, Oophila (Chlamydomonadales
University of Connecticut OpenCommons@UConn Master's Theses University of Connecticut Graduate School 12-16-2016 The yS mbiotic Green Algae, Oophila (Chlamydomonadales, Chlorophyceae): A Heterotrophic Growth Study and Taxonomic History Nikolaus Schultz University of Connecticut - Storrs, [email protected] Recommended Citation Schultz, Nikolaus, "The yS mbiotic Green Algae, Oophila (Chlamydomonadales, Chlorophyceae): A Heterotrophic Growth Study and Taxonomic History" (2016). Master's Theses. 1035. https://opencommons.uconn.edu/gs_theses/1035 This work is brought to you for free and open access by the University of Connecticut Graduate School at OpenCommons@UConn. It has been accepted for inclusion in Master's Theses by an authorized administrator of OpenCommons@UConn. For more information, please contact [email protected]. The Symbiotic Green Algae, Oophila (Chlamydomonadales, Chlorophyceae): A Heterotrophic Growth Study and Taxonomic History Nikolaus Eduard Schultz B.A., Trinity College, 2014 A Thesis Submitted in Partial Fulfillment of the Requirements for the Degree of Master of Science at the University of Connecticut 2016 Copyright by Nikolaus Eduard Schultz 2016 ii ACKNOWLEDGEMENTS This thesis was made possible through the guidance, teachings and support of numerous individuals in my life. First and foremost, Louise Lewis deserves recognition for her tremendous efforts in making this work possible. She has performed pioneering work on this algal system and is one of the preeminent phycologists of our time. She has spent hundreds of hours of her time mentoring and teaching me invaluable skills. For this and so much more, I am very appreciative and humbled to have worked with her. Thank you Louise! To my committee members, Kurt Schwenk and David Wagner, thank you for your mentorship and guidance. -
Fundamentals of Palaeobotany Fundamentals of Palaeobotany
Fundamentals of Palaeobotany Fundamentals of Palaeobotany cuGU .叮 v FimditLU'φL-EjAA ρummmm 吋 eαymGfr 伊拉ddd仇側向iep M d、 況 O C O W Illustrations by the author uc削 ∞叩N Nn凹創 刊,叫MH h 咀 可 白 a aEE-- EEA First published in 1987 by Chapman αndHallLtd 11 New Fetter Lane, London EC4P 4EE Published in the USA by Chα~pman and H all 29 West 35th Street: New Yo地 NY 10001 。 1987 S. V. M秒len Softcover reprint of the hardcover 1st edition 1987 ISBN-13: 978-94-010-7916-7 e-ISBN-13: 978-94-009-3151-0 DO1: 10.1007/978-94-009-3151-0 All rights reserved. No part of this book may be reprinted, or reproduced or utilized in any form or by any electronic, mechanical or other means, now known or hereafter invented, including photocopying and recording, or in any information storage and retrieval system, without permission in writing from the publisher. British Library Cataloguing in Publication Data Mey凹, Sergei V. Fundamentals of palaeobotany. 1. Palaeobotany I. Title 11. Osnovy paleobotaniki. English 561 QE905 Library 01 Congress Catα loging in Publication Data Mey凹, Sergei Viktorovich. Fundamentals of palaeobotany. Bibliography: p. Includes index. 1. Paleobotany. I. Title. QE904.AIM45 561 8ι13000 Contents Foreword page xi Introduction xvii Acknowledgements xx Abbreviations xxi 1. Preservation 抄'pes αnd techniques of study of fossil plants 1 2. Principles of typology and of nomenclature of fossil plants 5 Parataxa and eutaxa S Taxa and characters 8 Peculiarity of the taxonomy and nomenclature of fossil plants 11 The binary (dual) system of fossil plants 12 The reasons for the inflation of generic na,mes 13 The species problem in palaeobotany lS The polytypic concept of the species 17 Assemblage-genera and assemblage-species 17 The cladistic methods 18 3. -
An Alternative Model for the Earliest Evolution of Vascular Plants
1 1 An alternative model for the earliest evolution of vascular plants 2 3 BORJA CASCALES-MINANA, PHILIPPE STEEMANS, THOMAS SERVAIS, KEVIN LEPOT 4 AND PHILIPPE GERRIENNE 5 6 Land plants comprise the bryophytes and the polysporangiophytes. All extant polysporangiophytes are 7 vascular plants (tracheophytes), but to date, some basalmost polysporangiophytes (also called 8 protracheophytes) are considered non-vascular. Protracheophytes include the Horneophytopsida and 9 Aglaophyton/Teruelia. They are most generally considered phylogenetically intermediate between 10 bryophytes and vascular plants, and are therefore essential to elucidate the origins of current vascular 11 floras. Here, we propose an alternative evolutionary framework for the earliest tracheophytes. The 12 supporting evidence comes from the study of the Rhynie chert historical slides from the Natural History 13 Museum of Lille (France). From this, we emphasize that Horneophyton has a particular type of tracheid 14 characterized by narrow, irregular, annular and/or, possibly spiral wall thickenings of putative secondary 15 origin, and hence that it cannot be considered non-vascular anymore. Accordingly, our phylogenetic 16 analysis resolves Horneophyton and allies (i.e., Horneophytopsida) within tracheophytes, but as sister 17 to eutracheophytes (i.e., extant vascular plants). Together, horneophytes and eutracheophytes form a 18 new clade called herein supereutracheophytes. The thin, irregular, annular to helical thickenings of 19 Horneophyton clearly point to a sequential acquisition of the characters of water-conducting cells. 20 Because of their simple conducting cells and morphology, the horneophytophytes may be seen as the 21 precursors of all extant vascular plant biodiversity. 22 23 Keywords: Rhynie chert, Horneophyton, Tracheophyte, Lower Devonian, Cladistics. -
Chlorophyceae Incertae Sedis, Viridiplantae), Described from Europe
Preslia 87: 403–416, 2015 403 A new species Jenufa aeroterrestrica (Chlorophyceae incertae sedis, Viridiplantae), described from Europe Nový druh Jenufa aeroterrestrica (Chlorophyceae incertae sedis, Viridiplantae), popsaný z Evropy KateřinaProcházková,YvonneNěmcová&JiříNeustupa Department of Botany, Faculty of Science, Charles University of Prague, Benátská 2, CZ-128 01 Prague, Czech Republic, e-mail: [email protected] Procházková K., Němcová Y. & Neustupa J. (2015): A new species Jenufa aeroterrestrica (Chlorophyceae incertae sedis, Viridiplantae), described from Europe. – Preslia 87: 403–416. The chlorophycean genus Jenufa includes chlorelloid green microalgae with an irregularly spher- ical cell outline and a parietal perforated chloroplast with numerous lobes. Two species of the genus are known from tropical microhabitats. However, sequences recently obtained from vari- ous temperate subaerial biofilms indicate that members of the Jenufa lineage do not only occur in the tropics. In this paper, we describe and characterize a new species of the genus Jenufa, J. aero- terrestrica, which was identified in five samples of corticolous microalgal biofilms collected in Europe. These strains shared the general morphological and ultrastructural features of the genus Jenufa, but differed in having a larger average cell size and higher numbers of autospores. Phylo- genetic analyses showed that the strains clustered in a sister position to two previously described tropical species, together with previously published European 18S rDNA sequences. This pattern was also supported by the ITS2 rDNA sequences of the genus Jenufa. Our data and previously published sequences indicate that the newly described species J. aeroterrestrica frequently occurs in temperate and sub-Mediterranean European subaerial biofilms, such as those occurring on tree bark or surfaces of stone buildings. -
Devonian As a Time of Major Innovation in Plants and Their Communities
1 Back to the Beginnings: The Silurian- 2 Devonian as a Time of Major Innovation 15 3 in Plants and Their Communities 4 Patricia G. Gensel, Ian Glasspool, Robert A. Gastaldo, 5 Milan Libertin, and Jiří Kvaček 6 Abstract Silurian, with the Early Silurian Cooksonia barrandei 31 7 Massive changes in terrestrial paleoecology occurred dur- from central Europe representing the earliest vascular 32 8 ing the Devonian. This period saw the evolution of both plant known, to date. This plant had minute bifurcating 33 9 seed plants (e.g., Elkinsia and Moresnetia), fully lami- aerial axes terminating in expanded sporangia. Dispersed 34 10 nate∗ leaves and wood. Wood evolved independently in microfossils (spores and phytodebris) in continental and 35AU2 11 different plant groups during the Middle Devonian (arbo- coastal marine sediments provide the earliest evidence for 36 12 rescent lycopsids, cladoxylopsids, and progymnosperms) land plants, which are first reported from the Early 37 13 resulting in the evolution of the tree habit at this time Ordovician. 38 14 (Givetian, Gilboa forest, USA) and of various growth and 15 architectural configurations. By the end of the Devonian, 16 30-m-tall trees were distributed worldwide. Prior to the 17 appearance of a tree canopy habit, other early plant groups 15.1 Introduction 39 18 (trimerophytes) that colonized the planet’s landscapes 19 were of smaller stature attaining heights of a few meters Patricia G. Gensel and Milan Libertin 40 20 with a dense, three-dimensional array of thin lateral 21 branches functioning as “leaves”. Laminate leaves, as we We are now approaching the end of our journey to vegetated 41 AU3 22 now know them today, appeared, independently, at differ- landscapes that certainly are unfamiliar even to paleontolo- 42 23 ent times in the Devonian. -
Diversity and Evolution of the Megaphyll in Euphyllophytes
G Model PALEVO-665; No. of Pages 16 ARTICLE IN PRESS C. R. Palevol xxx (2012) xxx–xxx Contents lists available at SciVerse ScienceDirect Comptes Rendus Palevol w ww.sciencedirect.com General palaeontology, systematics and evolution (Palaeobotany) Diversity and evolution of the megaphyll in Euphyllophytes: Phylogenetic hypotheses and the problem of foliar organ definition Diversité et évolution de la mégaphylle chez les Euphyllophytes : hypothèses phylogénétiques et le problème de la définition de l’organe foliaire ∗ Adèle Corvez , Véronique Barriel , Jean-Yves Dubuisson UMR 7207 CNRS-MNHN-UPMC, centre de recherches en paléobiodiversité et paléoenvironnements, 57, rue Cuvier, CP 48, 75005 Paris, France a r t i c l e i n f o a b s t r a c t Article history: Recent paleobotanical studies suggest that megaphylls evolved several times in land plant st Received 1 February 2012 evolution, implying that behind the single word “megaphyll” are hidden very differ- Accepted after revision 23 May 2012 ent notions and concepts. We therefore review current knowledge about diverse foliar Available online xxx organs and related characters observed in fossil and living plants, using one phylogenetic hypothesis to infer their origins and evolution. Four foliar organs and one lateral axis are Presented by Philippe Taquet described in detail and differ by the different combination of four main characters: lateral organ symmetry, abdaxity, planation and webbing. Phylogenetic analyses show that the Keywords: “true” megaphyll appeared at least twice in Euphyllophytes, and that the history of the Euphyllophytes Megaphyll four main characters is different in each case. The current definition of the megaphyll is questioned; we propose a clear and accurate terminology in order to remove ambiguities Bilateral symmetry Abdaxity of the current vocabulary. -
81 Vascular Plant Diversity
f 80 CHAPTER 4 EVOLUTION AND DIVERSITY OF VASCULAR PLANTS UNIT II EVOLUTION AND DIVERSITY OF PLANTS 81 LYCOPODIOPHYTA Gleicheniales Polypodiales LYCOPODIOPSIDA Dipteridaceae (2/Il) Aspleniaceae (1—10/700+) Lycopodiaceae (5/300) Gleicheniaceae (6/125) Blechnaceae (9/200) ISOETOPSIDA Matoniaceae (2/4) Davalliaceae (4—5/65) Isoetaceae (1/200) Schizaeales Dennstaedtiaceae (11/170) Selaginellaceae (1/700) Anemiaceae (1/100+) Dryopteridaceae (40—45/1700) EUPHYLLOPHYTA Lygodiaceae (1/25) Lindsaeaceae (8/200) MONILOPHYTA Schizaeaceae (2/30) Lomariopsidaceae (4/70) EQifiSETOPSIDA Salviniales Oleandraceae (1/40) Equisetaceae (1/15) Marsileaceae (3/75) Onocleaceae (4/5) PSILOTOPSIDA Salviniaceae (2/16) Polypodiaceae (56/1200) Ophioglossaceae (4/55—80) Cyatheales Pteridaceae (50/950) Psilotaceae (2/17) Cibotiaceae (1/11) Saccolomataceae (1/12) MARATTIOPSIDA Culcitaceae (1/2) Tectariaceae (3—15/230) Marattiaceae (6/80) Cyatheaceae (4/600+) Thelypteridaceae (5—30/950) POLYPODIOPSIDA Dicksoniaceae (3/30) Woodsiaceae (15/700) Osmundales Loxomataceae (2/2) central vascular cylinder Osmundaceae (3/20) Metaxyaceae (1/2) SPERMATOPHYTA (See Chapter 5) Hymenophyllales Plagiogyriaceae (1/15) FIGURE 4.9 Anatomy of the root, an apomorphy of the vascular plants. A. Root whole mount. B. Root longitudinal-section. C. Whole Hymenophyllaceae (9/600) Thyrsopteridaceae (1/1) root cross-section. D. Close-up of central vascular cylinder, showing tissues. TABLE 4.1 Taxonomic groups of Tracheophyta, vascular plants (minus those of Spermatophyta, seed plants). Classes, orders, and family names after Smith et al. (2006). Higher groups (traditionally treated as phyla) after Cantino et al. (2007). Families in bold are described in found today in the Selaginellaceae of the lycophytes and all the pericycle or endodermis. Lateral roots penetrate the tis detail. -
Ultra-High Voltage Electron Microscopy of Primitive Algae Illuminates 3D
www.nature.com/scientificreports OPEN Ultra-high voltage electron microscopy of primitive algae illuminates 3D ultrastructures of Received: 08 June 2015 Accepted: 07 September 2015 the first photosynthetic eukaryote Published: 06 October 2015 Toshiyuki Takahashi1, Tomoki Nishida2,†,, Chieko Saito1, Hidehiro Yasuda2 & Hisayoshi Nozaki1 A heterotrophic organism 1–2 billion years ago enslaved a cyanobacterium to become the first photosynthetic eukaryote, and has diverged globally. The primary phototrophs, glaucophytes, are thought to retain ancestral features of the first photosynthetic eukaryote, but examining the protoplast ultrastructure has previously been problematic in the coccoid glaucophyte Glaucocystis due to its thick cell wall. Here, we examined the three-dimensional (3D) ultrastructure in two divergent species of Glaucocystis using ultra-high voltage electron microscopy. Three-dimensional modelling of Glaucocystis cells using electron tomography clearly showed that numerous, leaflet- like flattened vesicles are distributed throughout the protoplast periphery just underneath a single- layered plasma membrane. This 3D feature is essentially identical to that of another glaucophyte genus Cyanophora, as well as the secondary phototrophs in Alveolata. Thus, the common ancestor of glaucophytes and/or the first photosynthetic eukaryote may have shown similar 3D structures. Approximately 1–2 billion years ago during the Proterozoic Eon, a heterotrophic eukaryote enslaved a cyanobacterium to obtain the ability for photosynthesis and become the common ancestor of the pri- mary photosynthetic eukaryotes [Archaeplastida1,2 or Kingdom Plantae sensu Cavalier-Smith (1981)3,4]. Primary photosynthetic eukaryotes have ruled this planet as primary producers, evolving into species of three major lineages1,2,5,6; namely, red algae thriving throughout the ocean, Chloroplastida [Viridiplantae (green algae and land plants)] advancing onto land, and glaucophytes (Fig.