鹿児島県初記録のナガハチオコゼ Neocentropogon Aeglefinus Japonicus と標本に基づく鹿児島県産ハオコゼ科魚類の記録
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Reef Fishes of the Bird's Head Peninsula, West
Check List 5(3): 587–628, 2009. ISSN: 1809-127X LISTS OF SPECIES Reef fishes of the Bird’s Head Peninsula, West Papua, Indonesia Gerald R. Allen 1 Mark V. Erdmann 2 1 Department of Aquatic Zoology, Western Australian Museum. Locked Bag 49, Welshpool DC, Perth, Western Australia 6986. E-mail: [email protected] 2 Conservation International Indonesia Marine Program. Jl. Dr. Muwardi No. 17, Renon, Denpasar 80235 Indonesia. Abstract A checklist of shallow (to 60 m depth) reef fishes is provided for the Bird’s Head Peninsula region of West Papua, Indonesia. The area, which occupies the extreme western end of New Guinea, contains the world’s most diverse assemblage of coral reef fishes. The current checklist, which includes both historical records and recent survey results, includes 1,511 species in 451 genera and 111 families. Respective species totals for the three main coral reef areas – Raja Ampat Islands, Fakfak-Kaimana coast, and Cenderawasih Bay – are 1320, 995, and 877. In addition to its extraordinary species diversity, the region exhibits a remarkable level of endemism considering its relatively small area. A total of 26 species in 14 families are currently considered to be confined to the region. Introduction and finally a complex geologic past highlighted The region consisting of eastern Indonesia, East by shifting island arcs, oceanic plate collisions, Timor, Sabah, Philippines, Papua New Guinea, and widely fluctuating sea levels (Polhemus and the Solomon Islands is the global centre of 2007). reef fish diversity (Allen 2008). Approximately 2,460 species or 60 percent of the entire reef fish The Bird’s Head Peninsula and surrounding fauna of the Indo-West Pacific inhabits this waters has attracted the attention of naturalists and region, which is commonly referred to as the scientists ever since it was first visited by Coral Triangle (CT). -
Venom Evolution Widespread in Fishes: a Phylogenetic Road Map for the Bioprospecting of Piscine Venoms
Journal of Heredity 2006:97(3):206–217 ª The American Genetic Association. 2006. All rights reserved. doi:10.1093/jhered/esj034 For permissions, please email: [email protected]. Advance Access publication June 1, 2006 Venom Evolution Widespread in Fishes: A Phylogenetic Road Map for the Bioprospecting of Piscine Venoms WILLIAM LEO SMITH AND WARD C. WHEELER From the Department of Ecology, Evolution, and Environmental Biology, Columbia University, 1200 Amsterdam Avenue, New York, NY 10027 (Leo Smith); Division of Vertebrate Zoology (Ichthyology), American Museum of Natural History, Central Park West at 79th Street, New York, NY 10024-5192 (Leo Smith); and Division of Invertebrate Zoology, American Museum of Natural History, Central Park West at 79th Street, New York, NY 10024-5192 (Wheeler). Address correspondence to W. L. Smith at the address above, or e-mail: [email protected]. Abstract Knowledge of evolutionary relationships or phylogeny allows for effective predictions about the unstudied characteristics of species. These include the presence and biological activity of an organism’s venoms. To date, most venom bioprospecting has focused on snakes, resulting in six stroke and cancer treatment drugs that are nearing U.S. Food and Drug Administration review. Fishes, however, with thousands of venoms, represent an untapped resource of natural products. The first step in- volved in the efficient bioprospecting of these compounds is a phylogeny of venomous fishes. Here, we show the results of such an analysis and provide the first explicit suborder-level phylogeny for spiny-rayed fishes. The results, based on ;1.1 million aligned base pairs, suggest that, in contrast to previous estimates of 200 venomous fishes, .1,200 fishes in 12 clades should be presumed venomous. -
Reef Fishes of the Bird's Head Peninsula, West Papua, Indonesia
Check List 5(3): 587–628, 2009. ISSN: 1809-127X LISTS OF SPECIES Reef fishes of the Bird’s Head Peninsula, West Papua, Indonesia Gerald R. Allen 1 Mark V. Erdmann 2 1 Department of Aquatic Zoology, Western Australian Museum. Locked Bag 49, Welshpool DC, Perth, Western Australia 6986. E-mail: [email protected] 2 Conservation International Indonesia Marine Program. Jl. Dr. Muwardi No. 17, Renon, Denpasar 80235 Indonesia. Abstract A checklist of shallow (to 60 m depth) reef fishes is provided for the Bird’s Head Peninsula region of West Papua, Indonesia. The area, which occupies the extreme western end of New Guinea, contains the world’s most diverse assemblage of coral reef fishes. The current checklist, which includes both historical records and recent survey results, includes 1,511 species in 451 genera and 111 families. Respective species totals for the three main coral reef areas – Raja Ampat Islands, Fakfak-Kaimana coast, and Cenderawasih Bay – are 1320, 995, and 877. In addition to its extraordinary species diversity, the region exhibits a remarkable level of endemism considering its relatively small area. A total of 26 species in 14 families are currently considered to be confined to the region. Introduction and finally a complex geologic past highlighted The region consisting of eastern Indonesia, East by shifting island arcs, oceanic plate collisions, Timor, Sabah, Philippines, Papua New Guinea, and widely fluctuating sea levels (Polhemus and the Solomon Islands is the global centre of 2007). reef fish diversity (Allen 2008). Approximately 2,460 species or 60 percent of the entire reef fish The Bird’s Head Peninsula and surrounding fauna of the Indo-West Pacific inhabits this waters has attracted the attention of naturalists and region, which is commonly referred to as the scientists ever since it was first visited by Coral Triangle (CT). -
Evolution and Ecology in Widespread Acoustic Signaling Behavior Across Fishes
bioRxiv preprint doi: https://doi.org/10.1101/2020.09.14.296335; this version posted September 14, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 1 Evolution and Ecology in Widespread Acoustic Signaling Behavior Across Fishes 2 Aaron N. Rice1*, Stacy C. Farina2, Andrea J. Makowski3, Ingrid M. Kaatz4, Philip S. Lobel5, 3 William E. Bemis6, Andrew H. Bass3* 4 5 1. Center for Conservation Bioacoustics, Cornell Lab of Ornithology, Cornell University, 159 6 Sapsucker Woods Road, Ithaca, NY, USA 7 2. Department of Biology, Howard University, 415 College St NW, Washington, DC, USA 8 3. Department of Neurobiology and Behavior, Cornell University, 215 Tower Road, Ithaca, NY 9 USA 10 4. Stamford, CT, USA 11 5. Department of Biology, Boston University, 5 Cummington Street, Boston, MA, USA 12 6. Department of Ecology and Evolutionary Biology and Cornell University Museum of 13 Vertebrates, Cornell University, 215 Tower Road, Ithaca, NY, USA 14 15 ORCID Numbers: 16 ANR: 0000-0002-8598-9705 17 SCF: 0000-0003-2479-1268 18 WEB: 0000-0002-5669-2793 19 AHB: 0000-0002-0182-6715 20 21 *Authors for Correspondence 22 ANR: [email protected]; AHB: [email protected] 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.09.14.296335; this version posted September 14, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. -
Une Éruption Volcanique Débusque Neocentropogon Profundus (Tetrarogidae, Scorpaenoidei) À L’Île De La Réunion (Océan Indien)
Une éruption volcanique débusque Neocentropogon profundus (Tetrarogidae, Scorpaenoidei) à l’île de la Réunion (océan Indien) par Jean-Claude QUÉRO (1), Jérôme SPITZ* (2, 3) & Jean-Jacques VAYNE (4) RÉSUMÉ. - Du 8 au 11 avril 2007, à l’île de La Réunion, parmi les poissons récoltés à la surface suite à l’arrivée de la cou- lée de lave de l’éruption volcanique dans l’océan, figuraient 11 exemplaires deNeocentropogon profundus (Scorpaenoidei: Tetrarogidae). Ces spécimens constituent la plus grande collection disponible pour cette espèce auparavant connue que par deux exemplaires. Cette étude élargit ainsi très significativement les données numériques et méristiques disponibles pour N. profundus et permet de documenter sa coloration et la forme de ses otolithes. ABSTRACT. - The volcanic eruption hunts out Neocentropogon profundus (Tetrarogidae, Scorpaenoidei) from Reunion Island. From the 8th to the 11th April 2007, at Reunion Island (Indian Ocean), some fish were collected at sea surface after the eruption of the Piton de la Fournaise. Among these were eleven specimens of Neocentropogon profundus (Scorpaenoidei: Tetrarogidae). Six species of this genus have been described: two from the Pacific Ocean, N. japonicus Matsubara, 1943 and N. trimaculatus Chan, 1966; four from the Indian Ocean, N. affinis (Lloyd, 1909) from the Gulf of Martaban, Myan- mar, N. aeglefinus (Weber, 1913) from the Halmahera Sea, Timor Sea, probably a junior synonym of N. affinis, N. profun- dus (Smith, 1958) off Mozambique, and N. mesedai Klausewitz, 1985 from the Mismaris-Trough, Red Sea. The eleven specimens found at Reunion constitute the largest available collection for N. profundus, previously known from only two specimens. -
Description of Key Species Groups in the East Marine Region
Australian Museum Description of Key Species Groups in the East Marine Region Final Report – September 2007 1 Table of Contents Acronyms........................................................................................................................................ 3 List of Images ................................................................................................................................. 4 Acknowledgements ....................................................................................................................... 5 1 Introduction............................................................................................................................ 6 2 Corals (Scleractinia)............................................................................................................ 12 3 Crustacea ............................................................................................................................. 24 4 Demersal Teleost Fish ........................................................................................................ 54 5 Echinodermata..................................................................................................................... 66 6 Marine Snakes ..................................................................................................................... 80 7 Marine Turtles...................................................................................................................... 95 8 Molluscs ............................................................................................................................ -
HANDBOOK of FISH BIOLOGY and FISHERIES Volume 1 Also Available from Blackwell Publishing: Handbook of Fish Biology and Fisheries Edited by Paul J.B
HANDBOOK OF FISH BIOLOGY AND FISHERIES Volume 1 Also available from Blackwell Publishing: Handbook of Fish Biology and Fisheries Edited by Paul J.B. Hart and John D. Reynolds Volume 2 Fisheries Handbook of Fish Biology and Fisheries VOLUME 1 FISH BIOLOGY EDITED BY Paul J.B. Hart Department of Biology University of Leicester AND John D. Reynolds School of Biological Sciences University of East Anglia © 2002 by Blackwell Science Ltd a Blackwell Publishing company Chapter 8 © British Crown copyright, 1999 BLACKWELL PUBLISHING 350 Main Street, Malden, MA 02148‐5020, USA 108 Cowley Road, Oxford OX4 1JF, UK 550 Swanston Street, Carlton, Victoria 3053, Australia The right of Paul J.B. Hart and John D. Reynolds to be identified as the Authors of the Editorial Material in this Work has been asserted in accordance with the UK Copyright, Designs, and Patents Act 1988. All rights reserved. No part of this publication may be reproduced, stored in a retrieval system, or transmitted, in any form or by any means, electronic, mechanical, photocopying, recording or otherwise, except as permitted by the UK Copyright, Designs, and Patents Act 1988, without the prior permission of the publisher. First published 2002 Reprinted 2004 Library of Congress Cataloging‐in‐Publication Data has been applied for. Volume 1 ISBN 0‐632‐05412‐3 (hbk) Volume 2 ISBN 0‐632‐06482‐X (hbk) 2‐volume set ISBN 0‐632‐06483‐8 A catalogue record for this title is available from the British Library. Set in 9/11.5 pt Trump Mediaeval by SNP Best‐set Typesetter Ltd, Hong Kong Printed and bound in the United Kingdom by TJ International Ltd, Padstow, Cornwall. -
From Scales to Armour: Scale Losses and Trunk Bony Plate Gains in Ray
bioRxiv preprint doi: https://doi.org/10.1101/2020.09.09.288886; this version posted September 9, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. 1 From scales to armour: scale losses and trunk bony plate gains in ray- 2 finned fishes 3 Alexandre Lemopoulos1, Juan I. Montoya-Burgos1,2,3 4 1. Department of Genetics and Evolution. University of Geneva, Geneva, Switzerland 5 2. iGE3 institute of Genetics and Genomics of Geneva 6 3. E-mail: [email protected] ORCID: https://orcid.org/0000-0001-9080-9820 7 Article type : Letter 8 Running title: Tegument cover transitions along actinopterygian evolution 9 Keywords: Tegument, actinopterygians, gene network, skeleton evolution, functional 10 innovation, ancestral state, phylogeny 11 12 Abstract 13 Actinopterygians (ray-finned fishes) are the most diversified group of vertebrates and are 14 characterized by a variety of protective structures covering their tegument, the evolution of 15 which has intrigued biologists for decades. Paleontological records showed that the first 16 mineralized vertebrate skeleton was composed of dermal bony plates covering the body, 17 including odontogenic and skeletogenic components. Later in evolution, the exoskeleton of 18 actinopterygian's trunk was composed of scale structures. Although scales are nowadays a 19 widespread tegument cover, some contemporary lineages do not have scales but bony 20 plates covering their trunk, whereas other lineages are devoid of any such structures. -
Reef Fishes of Praia Do Tofo and Praia Da Barra, Inhambane, Mozambique
bioRxiv preprint doi: https://doi.org/10.1101/139261; this version posted May 17, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-ND 4.0 International license. 1 Reef fishes of praia do Tofo and praia da Barra, Inhambane, Mozambique 2 3 Alexander J. Fordyce1 4 5 6 1Marine Megafauna Association, Praia do Tofo, Inhambane, Mozambique. 7 8 9 Corresponding Author 10 Alexander John Fordyce. 11 Email address: [email protected] 12 13 14 15 16 17 18 19 20 21 22 23 24 25 bioRxiv preprint doi: https://doi.org/10.1101/139261; this version posted May 17, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-ND 4.0 International license. 26 Abstract 27 The coral reefs around Praia do Tofo and Praia da Barra, southern Mozambique, are known 28 for their aggregations of marine megafauna but few studies have examined their reef fish 29 biodiversity. This study assesses for the first time the ichthyofaunal diversity of the seas 30 around Praia do Tofo and Praia da Barra. Methods involved underwater observations during 31 recreational dives between February and September 2016, and the use of photographic 32 records from 2015. A total of 353 species, representing 79 families, were recorded from 16 33 patch reefs in the region. -
Actinopterygii: Perciformes
JapaneseJapaneseSociety Society ofSystematicof Systematic Zoology Species Diversity. 2004, 9, 1-36 Phylogenetic Relationships and New Classification of the Superfamily Scorpaenoidea (Actinopterygii: Perciformes) Hisashi Imamura lhe HOickaido University Museum, hacudy ofFisheries, HOkkaido Ultiversity, 3-1-1 Minato-cho. Htikodate, Hbkkaido, 041-8611 .Jtipan E-maii;imamura/(ti/museum.hokudai.ac.jp (Received 10 October 2e02; Accepted 10 August 2003) re- The phylogenetic relationships of the supeirlami!y Scorpaenoidea are constructed cladistically. based on speeimens belonging to 18 families, 59 genera, and 86species, by using osteological and myological characters rec- ognized in 111 transformation series. The tbllowing relationships are in- ferred; <1) the former Scerpaenoidei is paraphyletic; (2) the family Sebasti- dae is not monophyletic, most of the genera included having initially branched ofi' other ingroup taxa: (3) the family Setarchidae and Trachyscor- pia have a sister relationship, being nested within the paraphylatic Scor- paenidae; and <4) the family Neosebastidae is the sister group of the former Platycephaloidei, In conelusion, the Scorpaenoidea is reclassified into 20 families, accepting several redefined taxa, such as the Sebastidae, Sebastolo- bidae, and Seorpaenidae. Key Words: Scorpaenoidea, monophyly, phylogony, classification. Introduction The percifbrm superfamily Scorpaenoidea, including the former scorpaeni- fbrm suborders Scorpaenoidei and Platycephaloidei (sensu Imamura 1996; Esch- meyer 1998), was proposed by -
New Records of Two Finfish Species from Indian Waters
Marine Fisheries Information Service T&E Ser., No. 208, 2011 17 Table 1. Morphometric measurements of Acanthocepola Depth of body at anal insertion 26 limbata collected from Puthiappa Depth of body at mid-length 20 Depth of body at caudal insertion 10 Parameters Measurements (mm) Inter-orbital distance 7 Total length 268 Distance between eyes 13 Standard length 249 Breadth of body at dorsal insertion 15 Head length 35 Snout 9 Breadth of body at mid-length 7 Eye diameter (Same along both axes) 8 Width of gill opening 28 Eye (middle dark portion) 5 The specimen was identified to species level Maxillary length 15 using the FAO fish identification sheets (Fischer and Mandibular length 10 Bianchi,1994). The body is elongate, laterally Snout to insertion dorsal 24 Length of dorsal 218 compressed and gradually tapering to caudal. Last Snout to insertion pectoral 28 soft ray of dorsal and anal fins connected to caudal Length of pectoral 19 fin by a membrane. Scales cycloid, small, present Snout to insertion pelvic 22 on head and opercle. Eyes red, large and protractile. Length of pelvic 16 Mouth large, oblique; upper jaw broad at end, without Snout to insertion anal 37 supramaxilla, and extending to below posterior Length of anal 204 margin of eye with triangular tongue. Mouth has a Length of caudal 18 single row of slender, slightly curved teeth in jaws Snout to vent 34 and median palatine teeth. Preopercle bluntly Snout to origin of lateral line 42 Gape 14 serrated. Gill openings wide and semicircular. A single Depth of body in line with eye 22 long dorsal fin originates on head. -
Bayesian Node Dating Based on Probabilities of Fossil Sampling Supports Trans-Atlantic Dispersal of Cichlid Fishes
Supporting Information Bayesian Node Dating based on Probabilities of Fossil Sampling Supports Trans-Atlantic Dispersal of Cichlid Fishes Michael Matschiner,1,2y Zuzana Musilov´a,2,3 Julia M. I. Barth,1 Zuzana Starostov´a,3 Walter Salzburger,1,2 Mike Steel,4 and Remco Bouckaert5,6y Addresses: 1Centre for Ecological and Evolutionary Synthesis (CEES), Department of Biosciences, University of Oslo, Oslo, Norway 2Zoological Institute, University of Basel, Basel, Switzerland 3Department of Zoology, Faculty of Science, Charles University in Prague, Prague, Czech Republic 4Department of Mathematics and Statistics, University of Canterbury, Christchurch, New Zealand 5Department of Computer Science, University of Auckland, Auckland, New Zealand 6Computational Evolution Group, University of Auckland, Auckland, New Zealand yCorresponding author: E-mail: [email protected], [email protected] 1 Supplementary Text 1 1 Supplementary Text Supplementary Text S1: Sequencing protocols. Mitochondrial genomes of 26 cichlid species were amplified by long-range PCR followed by the 454 pyrosequencing on a GS Roche Junior platform. The primers for long-range PCR were designed specifically in the mitogenomic regions with low interspecific variability. The whole mitogenome of most species was amplified as three fragments using the following primer sets: for the region between position 2 500 bp and 7 300 bp (of mitogenome starting with tRNA-Phe), we used forward primers ZM2500F (5'-ACG ACC TCG ATG TTG GAT CAG GAC ATC C-3'), L2508KAW (Kawaguchi et al. 2001) or S-LA-16SF (Miya & Nishida 2000) and reverse primer ZM7350R (5'-TTA AGG CGT GGT CGT GGA AGT GAA GAA G-3'). The region between 7 300 bp and 12 300 bp was amplified using primers ZM7300F (5'-GCA CAT CCC TCC CAA CTA GGW TTT CAA GAT GC-3') and ZM12300R (5'-TTG CAC CAA GAG TTT TTG GTT CCT AAG ACC-3').