The Evolution and Development of Arthropod Appendages
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Conservation and Diversification of Appendage Identity Specification Mechanisms Along the Anteroposterior and Proximodistal Axes in Panarthropoda Frank W
University of Connecticut OpenCommons@UConn Doctoral Dissertations University of Connecticut Graduate School 8-23-2013 Conservation and Diversification of Appendage Identity Specification Mechanisms Along the Anteroposterior and Proximodistal Axes in Panarthropoda Frank W. Smith III University of Connecticut, [email protected] Follow this and additional works at: https://opencommons.uconn.edu/dissertations Recommended Citation Smith, Frank W. III, "Conservation and Diversification of Appendage Identity Specification Mechanisms Along the Anteroposterior and Proximodistal Axes in Panarthropoda" (2013). Doctoral Dissertations. 161. https://opencommons.uconn.edu/dissertations/161 Conservation and Diversification of Appendage Identity Specification Mechanisms Along the Anteroposterior and Proximodistal Axes in Panarthropoda Frank Wesley Smith III, PhD University of Connecticut, 2013 A key characteristic of arthropods is their diverse serially homologous segmented appendages. This dissertation explores diversification of these appendages, and the developmental mechanisms producing them. In Chapter 1, the roles of genes that specify antennal identity in Drosophila melanogaster were investigated in the flour beetle Tribolium castaneum. Antenna-to-leg transformations occurred in response to RNA interference (RNAi) against homothorax, extradenticle, spineless and Distal-less. However, for homothorax/extradenticle RNAi, the extent of transformation along the proximodistal axis differed between embryogenesis and metamorphosis. This suggests that distinct mechanisms specify antennal identity during flour beetle embryogenesis and metamorphosis and leads to a model for the evolution of the Drosophila antennal identity mechanism. Homothorax/Extradenticle acquire many of their identity specification roles by acting as Hox cofactors. In chapter 2, the metamorphic roles of the Hox genes, extradenticle, and homothorax were compared in T. castaneum. homothorax/extradenticle RNAi and Hox RNAi produced similar body wall phenotypes but different appendage phenotypes. -
A Practical Handbook for Determining the Ages of Gulf of Mexico And
A Practical Handbook for Determining the Ages of Gulf of Mexico and Atlantic Coast Fishes THIRD EDITION GSMFC No. 300 NOVEMBER 2020 i Gulf States Marine Fisheries Commission Commissioners and Proxies ALABAMA Senator R.L. “Bret” Allain, II Chris Blankenship, Commissioner State Senator District 21 Alabama Department of Conservation Franklin, Louisiana and Natural Resources John Roussel Montgomery, Alabama Zachary, Louisiana Representative Chris Pringle Mobile, Alabama MISSISSIPPI Chris Nelson Joe Spraggins, Executive Director Bon Secour Fisheries, Inc. Mississippi Department of Marine Bon Secour, Alabama Resources Biloxi, Mississippi FLORIDA Read Hendon Eric Sutton, Executive Director USM/Gulf Coast Research Laboratory Florida Fish and Wildlife Ocean Springs, Mississippi Conservation Commission Tallahassee, Florida TEXAS Representative Jay Trumbull Carter Smith, Executive Director Tallahassee, Florida Texas Parks and Wildlife Department Austin, Texas LOUISIANA Doug Boyd Jack Montoucet, Secretary Boerne, Texas Louisiana Department of Wildlife and Fisheries Baton Rouge, Louisiana GSMFC Staff ASMFC Staff Mr. David M. Donaldson Mr. Bob Beal Executive Director Executive Director Mr. Steven J. VanderKooy Mr. Jeffrey Kipp IJF Program Coordinator Stock Assessment Scientist Ms. Debora McIntyre Dr. Kristen Anstead IJF Staff Assistant Fisheries Scientist ii A Practical Handbook for Determining the Ages of Gulf of Mexico and Atlantic Coast Fishes Third Edition Edited by Steve VanderKooy Jessica Carroll Scott Elzey Jessica Gilmore Jeffrey Kipp Gulf States Marine Fisheries Commission 2404 Government St Ocean Springs, MS 39564 and Atlantic States Marine Fisheries Commission 1050 N. Highland Street Suite 200 A-N Arlington, VA 22201 Publication Number 300 November 2020 A publication of the Gulf States Marine Fisheries Commission pursuant to National Oceanic and Atmospheric Administration Award Number NA15NMF4070076 and NA15NMF4720399. -
Formation of Primordia and Phyllotaxy Andrew J Fleming
Formation of primordia and phyllotaxy Andrew J Fleming Leaves are made in an iterative pattern by the shoot apical Introduction meristem. The mechanism of this pattern formation has Immediately after germination, plants have an apparently fascinated biologists, mathematicians and poets for simple structure. During the subsequent lifetime of the centuries. Over the past year, fundamental insights into the plant, this structure can become exquisitely ornate. This molecular basis of this process have been gained. Patterns of is as a result of the ability of the plant to continually auxin polar transport dictate when and where new leaf generate organs from a specialised structure, the apical primordia are formed on the surface of the apical meristem. meristem. The most common organ formed is the leaf. Subsequent events are still obscure but appear to involve both These organs are not generated in a random fashion, alteration of cell wall characteristics (to facilitate a new vector of rather in a consistent pattern over space and time, produc- growth) and a cascade of spatially co-ordinated transcription ing the regular architecture of the plant. The meristem is, factor activity (to determine the fate of cells that are thus, a pattern-generating machine. Recent research, incorporated into new lateral organs). The co-ordinated described in this review, has provided key insights into signalling events involved in these processes are beginning the operation of this machine. to be elucidated. Meristems provide a field of cells from Addresses which leaves can be made Department of Animal and Plant Sciences, University of Sheffield, The shoot apical meristem consists of a population of cells Western Bank, Sheffield S10 2TN, UK that functions to maintain itself and, at periodic intervals, Corresponding author: Fleming, Andrew J (a.fleming@sheffield.ac.uk) to generate a new organ (a leaf primordium) from its lateral boundary (Figure 1). -
Section 2. Jack Pine (Pinus Banksiana)
SECTION 2. JACK PINE - 57 Section 2. Jack pine (Pinus banksiana) 1. Taxonomy and use 1.1. Taxonomy The largest genus in the family Pinaceae, Pinus L., which consists of about 110 pine species, occurs naturally through much of the Northern Hemisphere, from the far north to the cooler montane tropics (Peterson, 1980; Richardson, 1998). Two subgenera are usually recognised: hard pines (generally with much resin, wood close-grained, sheath of a leaf fascicle persistent, two fibrovascular bundles per needle — the diploxylon pines); and soft, or white pines (generally little resin, wood coarse-grained, sheath sheds early, one fibrovascular bundle in a needle — the haploxylon pines). These subgenera are called respectively subg. Pinus and subg. Strobus (Little and Critchfield, 1969; Price et al., 1998). Occasionally, one to about half the species (20 spp.) in subg. Strobus are classified instead in a variable subg. Ducampopinus. Jack pine (Pinus banksiana Lamb.) and its close relative lodgepole pine (Pinus contorta Dougl. Ex Loud.) are in subg. Pinus, subsection Contortae, which is classified either in section Trifoliis or a larger section Pinus (Little and Critchfield, 1969; Price et al., 1998). Additionally, subsect. Contortae usually includes Virginia pine (P. virginiana) and sand pine (P. clausa), which are in southeastern USA. Jack pine has two quite short (2-5 cm) stiff needles per fascicle (cluster) and lopsided (asymmetric) cones that curve toward the branch tip, and the cone scales often have a tiny prickle at each tip (Kral, 1993). Non-taxonomic ecological or biological variants of jack pine have been described, including dwarf, pendulous, and prostrate forms, having variegated needle colouration, and with unusual branching habits (Rudolph and Yeatman, 1982). -
Shh/Gli Signaling in Anterior Pituitary
SHH/GLI SIGNALING IN ANTERIOR PITUITARY AND VENTRAL TELENCEPHALON DEVELOPMENT by YIWEI WANG Submitted in partial fulfillment of the requirements For the degree of Doctor of Philosophy Department of Genetics CASE WESTERN RESERVE UNIVERSITY January, 2011 CASE WESTERN RESERVE UNIVERSITY SCHOOL OF GRADUATE STUDIES We hereby approve the thesis/dissertation of _____________________________________________________ candidate for the ______________________degree *. (signed)_______________________________________________ (chair of the committee) ________________________________________________ ________________________________________________ ________________________________________________ ________________________________________________ ________________________________________________ (date) _______________________ *We also certify that written approval has been obtained for any proprietary material contained therein. TABLE OF CONTENTS Table of Contents ••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••• i List of Figures ••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••• v List of Abbreviations •••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••• vii Acknowledgements •••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••• ix Abstract ••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••••• x Chapter 1 Background and Significance ••••••••••••••••••••••••••••••••••••••••••••••••• 1 1.1 Introduction to the pituitary gland -
Observations on the Springtail Leaping Organ and Jumping Mechanism Worked by a Spring
Observations on the Springtail Leaping Organ and Jumping Mechanism Worked by a Spring Seiichi Sudo a*, Masahiro Shiono a, Toshiya Kainuma a, Atsushi Shirai b, and Toshiyuki Hayase b a Faculty of Systems Science and Technology, Akita Prefectural University, Japan b Institute of Fluid Science, Tohoku University, Japan Abstract— This paper is concerned with a small In this paper, the springtail leaping organ was jumping mechanism. Microscopic observations of observed with confocal laser scanning microscopy. A springtail leaping organs were conducted using a jumping mechanism using a spring and small confocal leaser scanning microscope. A simple electromagnet was produced based on the observations springtail mechanism using a spring and small of leaping organ and the jumping analysis of the electromagnet was produced based on the observations springtail. of leaping organ and the jumping analysis of the globular springtail. Jumping characteristics of the mechanism were examined with high-speed video II. EXPERIMENTAL METHOD camera system. A. Microscopic Observations Index Terms—Jumping Mechanism, Leaping Organ, Globular springtails are small insects that reach Springtail, Morphology, Jumping Characteristics around 1 mm in size. They have the jumping organ (furcula), which can be folded under the abdomen. Muscular action releasing the furcula can throw the I. INTRODUCTION insect well out of the way of predators. Jumping in insect movement is an effective way to In this paper, microscopic observations of the furcula escape predators, find food, and change locations. were conducted using the confocal laser scanning Grasshoppers, fleas, bush crickets, katydids, and locusts microscope. Confocal laser scanning microscopy is are particularly well known for jumping mechanisms to fluorescence – imaging technique that produces move around. -
Function and Specificity of Synthetic Hox Transcription Factors in Vivo
Function and specificity of synthetic Hox transcription factors in vivo Dimitrios K. Papadopoulosa, Vladana Vukojevićb, Yoshitsugu Adachic, Lars Tereniusb, Rudolf Riglerd,e, and Walter J. Gehringa,1 aDepartment of Cell Biology, Biozentrum, University of Basel, 4056 Basel, Switzerland; bDepartment of Clinical Neuroscience, Karolinska Institutet, 17176 Stockholm, Sweden; cDepartment of Neuroscience, Institute of Psychiatry, King's College London, De Crespigny Park, Denmark Hill, London SE5 8AF, United Kingdom; dDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, 17177 Stockholm, Sweden; and eLaboratory of Biomedical Optics, Swiss Federal Institute of Technology, CH-1015 Lausanne, Switzerland Contributed by Walter J. Gehring, December 23, 2009 (sent for review November 3, 2009) Homeotic (Hox) genes encode transcription factors that confer Bric-à-Brac interacting protein 2 (Bip2) (17). However, Hox segmental identity along the anteroposterior axis of the embryo. cofactors do not suffice to entirely explain Hox specificity. The However the molecular mechanisms underlying Hox-mediated finding of cofactor independent Hox function (18) contributed transcription and the differential requirements for specificity in to the realization that further sequences residing in the N terminus the regulation of the vast number of Hox-target genes remain of Hox proteins might be the link for increased specificity in vivo. ill-defined. Here we show that synthetic Sex combs reduced In the present work we have derived synthetic Scr genes -
Order Ephemeroptera
Glossary 1. Abdomen: the third main division of the body; behind the head and thorax 2. Accessory flagellum: a small fingerlike projection or sub-antenna of the antenna, especially of amphipods 3. Anterior: in front; before 4. Apical: near or pertaining to the end of any structure, part of the structure that is farthest from the body; distal 5. Apicolateral: located apical and to the side 6. Basal: pertaining to the end of any structure that is nearest to the body; proximal 7. Bilobed: divided into two rounded parts (lobes) 8. Calcareous: resembling chalk or bone in texture; containing calcium 9. Carapace: the hardened part of some arthropods that spreads like a shield over several segments of the head and thorax 10. Carinae: elevated ridges or keels, often on a shell or exoskeleton 11. Caudal filament: threadlike projection at the end of the abdomen; like a tail 12. Cercus (pl. cerci): a paired appendage of the last abdominal segment 13. Concentric: a growth pattern on the opercula of some gastropods, marked by a series of circles that lie entirely within each other; compare multi-spiral and pauci-spiral 14. Corneus: resembling horn in texture, slightly hardened but still pliable 15. Coxa: the basal segment of an arthropod leg 16. Creeping welt: a slightly raised, often darkened structure on dipteran larvae 17. Crochet: a small hook-like organ 18. Cupule: a cup shaped organ, as on the antennae of some beetles (Coleoptera) 19. Detritus: disintegrated or broken up mineral or organic material 20. Dextral: the curvature of a gastropod shell where the opening is visible on the right when the spire is pointed up 21. -
Shape Matters: Hofmeister's Rule, Primordium Shape, and Flower Orientation
Int. J. Plant Sci. 164(4):505–517. 2003. ᭧ 2003 by The University of Chicago. All rights reserved. 1058-5893/2003/16404-0003$15.00 SHAPE MATTERS: HOFMEISTER’S RULE, PRIMORDIUM SHAPE, AND FLOWER ORIENTATION Bruce K. Kirchoff1 Department of Biology, P.O. Box 26170, University of North Carolina at Greensboro, Greensboro, North Carolina 27402-6170, U.S.A. Hofmeister’s rule is an empirical heuristic derived from the observation that new leaf primordia are formed in the largest space between the existing flanks of the older primordia. These observations have been repeatedly validated in studies of leaf arrangement, but there has been little attempt to extend them to inflorescence and floral organs. This investigation demonstrates the validity of Hofmeister’s observations to cincinnus and early flower development in Phenakospermum guyannense (Strelitziaceae) and Heliconia latispatha (Heliconiaceae) and relates these results to Paul Green’s work on the biophysics of organ formation. The cincinni of Phen- akospermum and Heliconia arise in the axils of primary bracts and produce a prophyll, continuation apex, and flower in regular succession. The shapes and orientations of the apical regions of the cincinni are correlated with the placement of these organs, which in turn effect the positions of the sepals and their sequence of formation. The result is two rows of mirror-image flowers. The mirror-image symmetry of the flowers is a direct result of Hofmeister’s rule in connection with the shape of the apical region. These two factors create a self-sustaining developmental system that produces prophylls, continuation apices, flowers, and sepals in regular succession. -
Gene Duplication and the Origins Of
Rivera et al. BMC Evolutionary Biology 2010, 10:123 http://www.biomedcentral.com/1471-2148/10/123 Daphnia Genomics Consortium RESEARCH ARTICLE Open Access Gene duplication and the origins of morphological complexity in pancrustacean eyes, a genomic approach Ajna S Rivera1, M Sabrina Pankey1, David C Plachetzki1, Carlos Villacorta1, Anna E Syme1, Jeanne M Serb1,3, Angela R Omilian2, Todd H Oakley1* Abstract Background: Duplication and divergence of genes and genetic networks is hypothesized to be a major driver of the evolution of complexity and novel features. Here, we examine the history of genes and genetic networks in the context of eye evolution by using new approaches to understand patterns of gene duplication during the evolution of metazoan genomes. We hypothesize that 1) genes involved in eye development and phototransduction have duplicated and are retained at higher rates in animal clades that possess more distinct types of optical design; and 2) genes with functional relationships were duplicated and lost together, thereby preserving genetic networks. To test these hypotheses, we examine the rates and patterns of gene duplication and loss evident in 19 metazoan genomes, including that of Daphnia pulex - the first completely sequenced crustacean genome. This is of particular interest because the pancrustaceans (hexapods+crustaceans) have more optical designs than any other major clade of animals, allowing us to test specifically whether the high amount of disparity in pancrustacean eyes is correlated with a higher rate of duplication and retention of vision genes. Results: Using protein predictions from 19 metazoan whole-genome projects, we found all members of 23 gene families known to be involved in eye development or phototransduction and deduced their phylogenetic relationships. -
Herpetofauna and Aquatic Macro-Invertebrate Use of the Kino Environmental Restoration Project (KERP)
Herpetofauna and Aquatic Macro-invertebrate Use of the Kino Environmental Restoration Project (KERP) Tucson, Pima County, Arizona Prepared for Pima County Regional Flood Control District Prepared by EPG, Inc. JANUARY 2007 - Plma County Regional FLOOD CONTROL DISTRICT MEMORANDUM Water Resources Regional Flood Control District DATE: January 5,2007 TO: Distribution FROM: Julia Fonseca SUBJECT: Kino Ecosystem Restoration Project Report The Ed Pastor Environmental Restoration ProjectiKino Ecosystem Restoration Project (KERP) is becoming an extraordinary urban wildlife resource. As such, the Pima County Regional Flood Control District (PCRFCD) contracted with the Environmental Planning Group (EPG) to gather observations of reptiles, amphibians, and aquatic insects at KERP. Water quality was also examined. The purpose of the work was to provide baseline data on current wildlife use of the KERP site, and to assess water quality for post-project aquatic wildlife conditions. I additionally requested sampling of macroinvertebrates at Agua Caliente Park and Sweetwater Wetlands in hopes that the differences in aquatic wildlife among the three sites might provide insights into the different habitats offered by KERF'. The results One of the most important wildlife benefits that KERP provides is aquatic habitat without predatory bullfrogs and non- native fish. Most other constructed ponds and wetlands in Tucson, such as the Sweetwater Wetlands and Agua Caliente pond, are fuIl of non-native predators which devastate native fish, amphibians and aquatic reptiles. The KERP Wetlands may provide an opportunity for reestablishing declining native herpetofauna. Provided that non- native fish, bullfrogs or crayfish are not introduced, KERP appears to provide adequate habitat for Sonoran Mud Turtles (Kinosternon sonoriense), Lowland Leopard Frogs (Rana yavapaiensis), and Mexican Gartersnakes (Tharnnophis eques) and Southwestern Woodhouse Toad (Bufo woodhousii australis). -
Visions & Reflections on the Origin of Smell: Odorant Receptors in Insects
Cell. Mol. Life Sci. 63 (2006) 1579–1585 1420-682X/06/141579-7 DOI 10.1007/s00018-006-6130-7 Cellular and Molecular Life Sciences © Birkhäuser Verlag, Basel, 2006 Visions & Reflections On the ORigin of smell: odorant receptors in insects R. Benton Laboratory of Neurogenetics and Behavior, The Rockefeller University, 1230 York Avenue, Box 63, New York, New York 10021 (USA), Fax: +1 212 327 7238, e-mail: [email protected] Received 23 March 2006; accepted 28 April 2006 Online First 19 June 2006 Abstract. Olfaction, the sense of smell, depends on large, suggested that odours are perceived by a conserved mecha- divergent families of odorant receptors that detect odour nism. Here I review recent revelations of significant struc- stimuli in the nose and transform them into patterns of neu- tural and functional differences between the Drosophila ronal activity that are recognised in the brain. The olfactory and mammalian odorant receptor proteins and discuss the circuits in mammals and insects display striking similarities implications for our understanding of the evolutionary and in their sensory physiology and neuroanatomy, which has molecular biology of the insect odorant receptors. Keywords. Olfaction, odorant receptor, signal transduction, GPCR, neuron, insect, mammal, evolution. Olfaction: the basics characterised by the presence of seven membrane-span- ning segments with an extracellular N terminus. OR pro- Olfaction is used by most animals to extract vital infor- teins are exposed to odours on the ciliated endings of olf- mation from volatile chemicals in the environment, such actory sensory neuron (OSN) dendrites in the olfactory as the presence of food or predators.