Chromosome Counts in the Varieties of Solanum
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Breeding Virus Resistant Potatoes (Solanum Tuberosum): a Review of Traditional and Molecular Approaches
Heredity 86 (2001) 17±35 Received 22 December 1999, accepted 20 September 2000 Breeding virus resistant potatoes (Solanum tuberosum): a review of traditional and molecular approaches RUTH M. SOLOMON-BLACKBURN* & HUGH BARKER Scottish Crop Research Institute, Invergowrie, Dundee DD2 5DA, Scotland, U.K. Tetraploid cultivated potato (Solanum tuberosum) is the World's fourth most important crop and has been subjected to much breeding eort, including the incorporation of resistance to viruses. Several new approaches, ideas and technologies have emerged recently that could aect the future direction of virus resistance breeding. Thus, there are new opportunities to harness molecular techniques in the form of linked molecular markers to speed up and simplify selection of host resistance genes. The practical application of pathogen-derived transgenic resistance has arrived with the ®rst release of GM potatoes engineered for virus resistance in the USA. Recently, a cloned host virus resistance gene from potato has been shown to be eective when inserted into a potato cultivar lacking the gene. These and other developments oer great opportunities for improving virus resistance, and it is timely to consider these advances and consider the future direction of resistance breeding in potato. We review the sources of available resistance, conventional breeding methods, marker-assisted selection, somaclonal variation, pathogen-derived and other transgenic resistance, and transformation with cloned host genes. The relative merits of the dierent methods are discussed, and the likely direction of future developments is considered. Keywords: breeding, host gene, potato virus, resistance, review, transgenic. The viruses whether the infection is primary (current season infec- tion) or secondary (tuber-borne). -
How Does Genome Size Affect the Evolution of Pollen Tube Growth Rate, a Haploid Performance Trait?
Manuscript bioRxiv preprint doi: https://doi.org/10.1101/462663; this version postedClick April here18, 2019. to The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv aaccess/download;Manuscript;PTGR.genome.evolution.15April20 license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Effects of genome size on pollen performance 2 3 4 5 How does genome size affect the evolution of pollen tube growth rate, a haploid 6 performance trait? 7 8 9 10 11 John B. Reese1,2 and Joseph H. Williams2 12 Department of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN 13 37996, U.S.A. 14 15 16 17 1Author for correspondence: 18 John B. Reese 19 Tel: 865 974 9371 20 Email: [email protected] 21 1 bioRxiv preprint doi: https://doi.org/10.1101/462663; this version posted April 18, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 22 ABSTRACT 23 Premise of the Study – Male gametophytes of most seed plants deliver sperm to eggs via a 24 pollen tube. Pollen tube growth rates (PTGRs) of angiosperms are exceptionally rapid, a pattern 25 attributed to more effective haploid selection under stronger pollen competition. Paradoxically, 26 whole genome duplication (WGD) has been common in angiosperms but rare in gymnosperms. -
Comparative Evaluation of the Effects of Gibberellic Acid Concentrations
Comparative Evaluation of the Effects of Below the surface of the soil, a potato plant produces both roots Gibberellic Acid Concentrations on Dormancy and stem organs called stolons. Flow- ering in potato plants generally coin- Break in Tubers of Solanum chacoense cides with the swelling of stolon tips in which a majority of the tuber is formed 1 1 by randomly oriented cell division and Christian T. Christensen , Lincoln Zotarelli , expansion (Jackson, 1999). Deposited Kathleen G. Haynes2, and Charles Ethan Kelly1 in these cells are storage carbohydrates and proteins, including starch and patatin, respectively (Shewry, 2003), ADDITIONAL INDEX WORDS. potato, sprout number, tuber size making tubers strong storage sink or- gans (Fernie and Willmitzer, 2001). SUMMARY. Solanum chacoense is a wild relative of potato (Solanum tuberosum) that is of interest because of its many desirable traits, but it exhibits variations in tuber Coinciding with tuber formation is the dormancy across accessions. The objective of this study was to determine an appro- onset of dormancy. Dormancy can be priate gibberellic acid (GA3) concentration and soak time treatment to encourage described as the halting of all meriste- sprout development across four accessions of S. chacoense (A,B,C,andD)fromthe matic activity in the stolon apex and 174 accessions of the U.S. Department of Agriculture Potato Genebank. Twelve nodes (Sonnewald, 2001; Xu et al., treatments were created by using four concentrations of GA3 (0, 50, 100, and 150 1998), and it serves physiological ad- m Á L1 g mL ) across three soak periods (5, 45, and 90 minutes). Small (average weight, aptation by allowing survival during 1.4 g), medium (2.6 g), and large (5.6 g) tubers were distributed among all treat- periods of unfavorable conditions ments. -
Diversity in the Wild Potato Species Solanum Chacoense Bitt
Euphytica 37:149-156 (1988) @ Kluwer Academic Publishers, Dordrecht -Printed in the Netherlands Diversity in the wild potato species Solanum chacoenseBitt. SusanA. Juned,M. T. Jacksonand JanetP. Catty Department of Plant Biology, University of Birmingham, P.O. Box 363, Birmingham B15 2TT 25 November 1986; accepted in revised form 13 March 1987 Key words: Solanum chacoense,potato, wild species, diversity, multivariate analysis, isozymes, allozyme variation, in situ conservation Summary The morphologicat and isozyme variation was studied in 22 accessionsof Solanum chacoensefrom Paraguay and Argentina. Clear geographic groups were identified through the use of multivariate analyses. S. chacoensefrom mountain sites in Argentina could be readily distinguished from plains forms from Paraguay, on the basisof severalcorrelated morphological characters. Three isozyme systems,namely phosphoglucose isomerase (PGI), glutamate-oxaloacetate transaminase (GOT) and peroxidase (PRX) were studied using starch gel electrophoresis. The banding patterns indicated that for each isozyme there were several loci, which were polymorphic. A genetic interpretation of one of the PGI loci was made, and indices of genetic diversity and genetic identity calculated. Principal components analysis, cluster analysisand genetic diversity indicated a close relationship between the geographicalgroups. Theseresults are discussedin the context of in situ genetic conservation. Introduction through gene introgression from speciesof higher altitudes, such as S. microdontum (Hawkes & Solanum chacoenseBitt. is considered by Hawkes Hjerting, 1969). & Hjerting (1969) to be the commonest, most ag- This apparant introgression of alien germplasm gressiveand most adaptable of the South American has enabled S. chacoenseto extend its range of wild potato species. It is found in Argentina, Para- biotypes and become adapted to a wider range of guay, Uruguay and south-eastern Brazil, with ecological conditions. -
Starch Granule Evidence for the Earliest Potato Use in North America
Starch granule evidence for the earliest potato use in North America Lisbeth A. Louderbacka,1 and Bruce M. Pavlikb aNatural History Museum of Utah, Anthropology Department, University of Utah, Salt Lake City, UT 84108; and bRed Butte Garden and Arboretum, Conservation Department, University of Utah, Salt Lake City, UT 84108 Edited by Dolores R. Piperno, Smithsonian Institution, Fairfax, VA, and approved May 16, 2017 (received for review April 3, 2017) The prehistory of wild potato use, leading to its domestication and Study Site: Archaeological Context diversification, has been well-documented in, and confined to, South NCS is a deeply stratified site at the base of a south-facing sand- America. At least 20 tuber-bearing, wild species of Solanum are stone cliff at an elevation of 1,900 m (37°46.200′ N, 111°40.812′ W) known from North and Central America, yet their importance in (Fig. 2). Excavations of NCS occurred between 2004 and 2008, ancient diets has never been assessed from the archaeological re- uncovering numerous hearths and pits and abundant stone tools, cord. Here, we report the earliest evidence of wild potato use in faunal assemblages, and botanical remains (14). The excavations North America at 10,900–10,100 calendar years (cal) B.P. in the form revealed seven cultural strata, dating from 11,500 to 150 cal B.P. of well-preserved starch granules extracted from ground stone tools Thirty-five radiocarbon dates were obtained on various materials at North Creek Shelter, southern Utah. These granules have been (bone/collagen, dentin, wood/charcoal, fruits/seeds; Table S1), Solanum jamesii identified as those of Torr. -
Lessons from an Inventory of the Ames, Iowa, Flora (1859-2000) William R
NCRPIS Publications and Papers North Central Regional Plant Introduction Station 2001 Lessons From an Inventory of the Ames, Iowa, Flora (1859-2000) William R. Norris Western New Mexico University Deborah Q. Lewis Iowa State University Mark P. Widrlechner United States Department of Agriculture, [email protected] Jimmie D. Thompson Richard O. Pope Iowa State University Follow this and additional works at: http://lib.dr.iastate.edu/ncrpis_pubs Part of the Agricultural Science Commons, Botany Commons, and the Entomology Commons The ompc lete bibliographic information for this item can be found at http://lib.dr.iastate.edu/ ncrpis_pubs/74. For information on how to cite this item, please visit http://lib.dr.iastate.edu/ howtocite.html. This Article is brought to you for free and open access by the North Central Regional Plant Introduction Station at Iowa State University Digital Repository. It has been accepted for inclusion in NCRPIS Publications and Papers by an authorized administrator of Iowa State University Digital Repository. For more information, please contact [email protected]. lour. Iowa Acad. Sci. 108(2):34-63, 2001 Lessons From an Inventory of the Ames, Iowa, Flora (1859-2000) WILLIAM R. NORRIS1, DEBORAH Q. LEWIS2*, MARK P. WIDRLECHNER3, JIMMIED. THOMPSON4 and RICHARD 0. POPE5 .i 1Department of Natural Sciences, Western New Mexico University, Silver City, New Mexico 88061 2Department of Botany, Iowa State University, Ames, Iowa 50011-1020 3U.S. Department of Agriculture, Agricultural Research Service, North Central Regional Plant Introduction Station, Department of Agronomy, Iowa State University, Ames, Iowa 50011-1170 419516 515 Ave., Ames, Iowa 50014 5Department of Entomology, Iowa State University, Ames, Iowa 50011-3140 A botanical survey of the vascular flora of the "planning and zoning jurisdiction" of the city of Ames, Iowa (i.e., the area within a boundary 3.2 km beyond the current city limits) was compiled from 1990 to 2000. -
First Progress Report
Proyecto Base de Datos de Especies Invasoras del Paraguay Informe Final Data Content Grants under the Invasive Species Thematic Network Preparado por: Cristina Morales, Oscar Rodas, Juana de Egea, Silvia Centrón, Verónica Morales y Alberto Yanosky Asociación Guyra Paraguay 5/Junio/2007 1 RESUMEN El documento presenta los logros del proyecto “Construyendo Capacidades para el Desarrollo de la Red Paraguaya de Especies Invasoras” el cual tuvo como objetivo establecer, actualizar y mantener una base de datos I3N de especies exóticas invasoras en Paraguay. El proyecto se inició en mayo de 2006 y fue lanzado durante el Seminario de entrenamiento sobre herramientas para la organización y el intercambio de información sobre invasiones biológicas, realizado con el apoyo de Sergio Zalva, y Silvia Ziller. Participaron del taller 27 representantes de Instituciones gubernamentales y no gubernamentales conservacionistas, académicos, investigadores, estudiantes de pre-grado. Como resultado del evento se creó una red instituciones que aportan información a la base de datos: el Museo Nacional de Historia Natural del Paraguay, la Fundación Moisés Bertoni, Guyra Paraguay, como administrador y proveedor de datos y el Centro de Datos para la Conservación, como entidad supervisora y de validación de datos. La base de datos de especies exóticas invasoras, desarrollada durante el presente proyecto, se basó en el análisis y actualización de los listados previos realizados por el Centro de Datos para la Conservación en el año 2002, el cual cuenta con 422 especies y por la Dirección de Vida Silvestre en el año 2006 que cuenta con un listado de 172 especies. Como resultado de la evaluación de estas dos listas, se obtuvo una lista revisada de 135 especies exóticas invasoras y 1185 registros. -
Systematics, Diversity, Genetics, and Evolution of Wild and Cultivated Potatoes
Bot. Rev. (2014) 80:283–383 DOI 10.1007/s12229-014-9146-y Systematics, Diversity, Genetics, and Evolution of Wild and Cultivated Potatoes David M. Spooner1,6 & Marc Ghislain2 & Reinhard Simon3 & Shelley H. Jansky1 & Tatjana Gavrilenko4,5 1 USDA Agricultural Research Service, Department of Horticulture, University of Wisconsin, Madison, WI 53706-1590, USA; e-mail: [email protected] 2 Genomics & Biotechnology Global Program, Centro International de la Papa (CIP), SSA Regional Office, CIP ILRI Campus, Old Naivasha Road, P.O. Box 25171, Nairobi 00603, Kenya; e-mail: [email protected] 3 Integrated IT and Computational Research Unit, International Potato Center, Avenida La Molina 1895, La Molina, Lima, Peru; e-mail: [email protected] 4 Department of Biotechnology, N.I. Vavilov Institute of Plant Industry (VIR), Bolshaya Morskaya Street, 42- 44, 190000 St. Petersburg, Russia; e-mail: [email protected] 5 St. Petersburg State University, Universitetskaya nab., 7/9, 199034 St. Petersburg, Russia 6 Author for Correspondence; e-mail: [email protected] Published online: 19 December 2014 # The New York Botanical Garden (outside the USA) 2014 Abstract The common potato, Solanum tuberosum L., is the third most important food crop and is grown and consumed worldwide. Indigenous cultivated (landrace) potatoes and wild potato species, all classified as Solanum section Petota, are widely used for potato improvement. Members of section Petota are broadly distributed in the Americas from the southwestern United States to the Southern Cone of South America. The latest comprehensive taxonomic treatment of section Petota was pub- lished by John (Jack) Hawkes in 1990; it recognized seven cultivated species and 228 wild species, divided into 21 taxonomic series. -
Plant Nomenclature and Taxonomy an Horticultural and Agronomic Perspective
3913 P-01 7/22/02 4:25 PM Page 1 1 Plant Nomenclature and Taxonomy An Horticultural and Agronomic Perspective David M. Spooner* Ronald G. van den Berg U.S. Department of Agriculture Biosystematics Group Agricultural Research Service Department of Plant Sciences Vegetable Crops Research Unit Wageningen University Department of Horticulture PO Box 8010 University of Wisconsin 6700 ED Wageningen 1575 Linden Drive The Netherlands Madison Wisconsin 53706-1590 Willem A. Brandenburg Plant Research International Wilbert L. A. Hetterscheid PO Box 16 VKC/NDS 6700 AA, Wageningen Linnaeuslaan 2a The Netherlands 1431 JV Aalsmeer The Netherlands I. INTRODUCTION A. Taxonomy and Systematics B. Wild and Cultivated Plants II. SPECIES CONCEPTS IN WILD PLANTS A. Morphological Species Concepts B. Interbreeding Species Concepts C. Ecological Species Concepts D. Cladistic Species Concepts E. Eclectic Species Concepts F. Nominalistic Species Concepts *The authors thank Paul Berry, Philip Cantino, Vicki Funk, Charles Heiser, Jules Janick, Thomas Lammers, and Jeffrey Strachan for review of parts or all of our paper. Horticultural Reviews, Volume 28, Edited by Jules Janick ISBN 0-471-21542-2 © 2003 John Wiley & Sons, Inc. 1 3913 P-01 7/22/02 4:25 PM Page 2 2 D. SPOONER, W. HETTERSCHEID, R. VAN DEN BERG, AND W. BRANDENBURG III. CLASSIFICATION PHILOSOPHIES IN WILD AND CULTIVATED PLANTS A. Wild Plants B. Cultivated Plants IV. BRIEF HISTORY OF NOMENCLATURE AND CODES V. FUNDAMENTAL DIFFERENCES IN THE CLASSIFICATION AND NOMENCLATURE OF CULTIVATED AND WILD PLANTS A. Ambiguity of the Term Variety B. Culton Versus Taxon C. Open Versus Closed Classifications VI. A COMPARISON OF THE ICBN AND ICNCP A. -
Heritability of Field Resistance to Potato Leafrou Virus in Cultivated Potato
Plant Breeding 116, 585—588 (1997) © 1997 Blackwell Wissenschafts-Verlag, Berlin ISSN 0179-9541 Heritability of field resistance to potato leafroU virus in cultivated potato C. R. BROWN', D. CORSINI^ J. PAVEK^ and P. E. THOMAS' ' USDA/ARS, 24106 North Bunn Road, Prosser, WA, 99350, USA; ^USDA/ARS, PO Box AA, Aberdeen, ID, 83210, USA IVlth 1 figure and I table Received February 3. 1997jAccepted July 15, 1997 Communicated by W. E. Weber Abstract resistance to late blight (Ross 1958, 1966). Resistance to infec- Potato progenies in a line x tester mating design and the clonal parents tion appears to have been introduced to many pedigrees were screened for field resistance to potato leafroll virus (PLRV) to through use of the variety 'Aquila' in crossing programmes determine the heritability of this trait. Twelve advanced potato clones (Davidson 1980). Combining ability for resistance to infection or varieties were crossed as pistillate parents to two pollen testers. in STT cultivars and advanced breeding clones has been The seedling progenies and clonal parents were exposed to aphid- explored by Baerecke (1955, 1958) Brown (1979, 1984), and transmitted potato leafroll virus for two growing seasons. Cumulative Brown et al. (1984a,b) and Brandolini and coworkers (1992). infection by potato leafroll virus was determined by post-season sero- Resistance to titre build-up has been characterized in cultivated logical indexing of foliage grown from sprouted tubers after 2 years of STT materials and attributed to a mode of inheritance involving exposure. Narrow-sense heritability was estimated from regression of mid-parent on progeny as h^ = 0.72. -
Annotated Checklist of the Vascular Plant Flora of Grand Canyon-Parashant National Monument Phase II Report
Annotated Checklist of the Vascular Plant Flora of Grand Canyon-Parashant National Monument Phase II Report By Dr. Terri Hildebrand Southern Utah University, Cedar City, UT and Dr. Walter Fertig Moenave Botanical Consulting, Kanab, UT Colorado Plateau Cooperative Ecosystems Studies Unit Agreement # H1200-09-0005 1 May 2012 Prepared for Grand Canyon-Parashant National Monument Southern Utah University National Park Service Mojave Network TABLE OF CONTENTS Page # Introduction . 4 Study Area . 6 History and Setting . 6 Geology and Associated Ecoregions . 6 Soils and Climate . 7 Vegetation . 10 Previous Botanical Studies . 11 Methods . 17 Results . 21 Discussion . 28 Conclusions . 32 Acknowledgments . 33 Literature Cited . 34 Figures Figure 1. Location of Grand Canyon-Parashant National Monument in northern Arizona . 5 Figure 2. Ecoregions and 2010-2011 collection sites in Grand Canyon-Parashant National Monument in northern Arizona . 8 Figure 3. Soil types and 2010-2011 collection sites in Grand Canyon-Parashant National Monument in northern Arizona . 9 Figure 4. Increase in the number of plant taxa confirmed as present in Grand Canyon- Parashant National Monument by decade, 1900-2011 . 13 Figure 5. Southern Utah University students enrolled in the 2010 Plant Anatomy and Diversity course that collected during the 30 August 2010 experiential learning event . 18 Figure 6. 2010-2011 collection sites and transportation routes in Grand Canyon-Parashant National Monument in northern Arizona . 22 2 TABLE OF CONTENTS Page # Tables Table 1. Chronology of plant-collecting efforts at Grand Canyon-Parashant National Monument . 14 Table 2. Data fields in the annotated checklist of the flora of Grand Canyon-Parashant National Monument (Appendices A, B, C, and D) . -
A Comprehensive Analysis of RALF Proteins in Green Plants Suggests There Are Two Distinct Functional Groups
ORIGINAL RESEARCH published: 24 January 2017 doi: 10.3389/fpls.2017.00037 A Comprehensive Analysis of RALF Proteins in Green Plants Suggests There Are Two Distinct Functional Groups Liam Campbell and Simon R. Turner * Faculty of Biology, Medicine and Health, School of Biological Science, University of Manchester, Manchester, UK Rapid Alkalinization Factors (RALFs) are small, cysteine-rich peptides known to be involved in various aspects of plant development and growth. Although RALF peptides have been identified within many species, a single wide-ranging phylogenetic analysis of the family across the plant kingdom has not yet been undertaken. Here, we identified RALF proteins from 51 plant species that represent a variety of land plant lineages. The inferred evolutionary history of the 795 identified RALFs suggests that the family has diverged into four major clades. We found that much of the variation across the family exists within the mature peptide region, suggesting clade-specific functional Edited by: diversification. Clades I, II, and III contain the features that have been identified as Madelaine Elisabeth Bartlett, University of Massachusetts Amherst, important for RALF activity, including the RRXL cleavage site and the YISY motif required USA for receptor binding. In contrast, members of clades IV that represent a third of the total Reviewed by: dataset, is highly diverged and lacks these features that are typical of RALFs. Members of Tatiana Arias, The Corporation for Biological clade IV also exhibit distinct expression patterns and physico-chemical properties. These Research, Colombia differences suggest a functional divergence of clades and consequently, we propose Ive De Smet, that the peptides within clade IV are not true RALFs, but are more accurately described Flanders Institute for Biotechnology, Belgium as RALF-related peptides.