ABSA General Microbiology Fact Sheets
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Review Pili in Gram-Negative and Gram-Positive Bacteria – Structure
Cell. Mol. Life Sci. 66 (2009) 613 – 635 1420-682X/09/040613-23 Cellular and Molecular Life Sciences DOI 10.1007/s00018-008-8477-4 Birkhuser Verlag, Basel, 2008 Review Pili in Gram-negative and Gram-positive bacteria – structure, assembly and their role in disease T. Profta,c,* and E. N. Bakerb,c a School of Medical Sciences, Department of Molecular Medicine & Pathology, University of Auckland, Private Bag 92019, Auckland 1142 (New Zealand), Fax: +64-9-373-7492, e-mail: [email protected] b School of Biological Sciences, University of Auckland, Auckland (New Zealand) c Maurice Wilkins Centre for Molecular Biodiscovery, University of Auckland (New Zealand) Received 08 August 2008; received after revision 24 September 2008; accepted 01 October 2008 Online First 27 October 2008 Abstract. Many bacterial species possess long fila- special form of bacterial cell movement, known as mentous structures known as pili or fimbriae extend- twitching motility. In contrast, the more recently ing from their surfaces. Despite the diversity in pilus discovered pili in Gram-positive bacteria are formed structure and biogenesis, pili in Gram-negative bac- by covalent polymerization of pilin subunits in a teria are typically formed by non-covalent homopo- process that requires a dedicated sortase enzyme. lymerization of major pilus subunit proteins (pilins), Minor pilins are added to the fiber and play a major which generates the pilus shaft. Additional pilins may role in host cell colonization. be added to the fiber and often function as host cell This review gives an overview of the structure, adhesins. Some pili are also involved in biofilm assembly and function of the best-characterized pili formation, phage transduction, DNA uptake and a of both Gram-negative and Gram-positive bacteria. -
General Microbiology (11:680:390) Syllabus
COURSE SYLLABUS General Microbiology - 11:680:390 COURSE OVERVIEW General Microbiology 11:680:390 Fall, Spring, Summer Meeting times TBD Meeting Location Lecture: Sychronous Lecture Hall Cook/Douglas and Wright Labs Busch Meeting Location Lab: Food Science 209 CONTACT INFORMATION: Course Coordinator: Dr. Ines Rauschenbach Office Location: Lipman Hall, Room 215 Phone: 848-932-5635 Email: [email protected] Office Hours: By Appointment COURSE WEBSITE, RESOURCES AND MATERIALS: • Canvas • Text: Madigan MT, Bender KS, Buckley DH, Sattley WM, Stahl DA. 2020. Brock Biology of Microorganisms. 16th edition. Pearson, New York, NY. • Lab Manual o The lab manual (departmental publication) will be available for free through RUCore. • Electronic Notebook o We will be sending you a link to LabArchives. You must sign up before the start of your first lab. COURSE DESCRIPTION: This course offers a comprehensive study of the field of microbiology to science majors. The course will give detailed insights into five major themes: Structure and function of microbes (cellular structures, metabolism, and growth);,microbial genetics, microbial ecology, microbial diversity (prokaryotes, eukaryotes, viruses) and clinical microbiology (immunity, pathogenicity, epidemiology, control of microbes, and diseases). The course is taught in the synchronous lecture halls on Cook/Douglass and Busch campuses. Students are expected to participate in active learning activities and participate in class discussion to deepen their understanding of the microbial world and apply their knowledge to various concepts. LEARNING GOALS: Learning Goals for General Microbiology Lecture: After completion of the lecture component of the course, successful students will: 1. Demonstrate an understanding of the structural similarities and differences among microbes and the unique structure/function relationships of prokaryotic cells. -
Leprae by Means of Cytoplasmic Antigens
Bull. Org. mond. Santt 1972, 46, 509-513 Bull. Wld Hlth Org. Immunological determination of Mycobacterium leprae by means of cytoplasmic antigens J. B. G. KWAPINSKI,1 J. 0. DE ALMEIDA,2 & E. H. KWAPINSKI 3 Mycobacterium leprae was isolated and purified from lepromas, the spleen, and the liver of leprosy patients. An immunodiffusion analysis of the cytoplasms obtained from four lots of M. leprae and M. lepraemurium, 295 strains of different actinomycetales, and 12 other bacteria was performed with the use ofthe cytoplasm antisera. Immunological relationships were revealed between the cytoplasms of M. leprae, M. lepraemurium, M. avium, M. gallinarum, M. tuberculosis, M. simiae, M. kansasii, M. chitae, M. cap- sulatum, Actinomyces israelii, A. naeslundii, and some strains of saprophytic myco- bacteria. These studies led to the proposed concept of the immunological evolution of M. leprae and M. lepraemurium and an Actinomyces-like progenitor through M. avium- M. gallinarum and to a proposal for the polyvalent vaccine currently being developed by this research group. Most of the past immunological research on lep- help to elucidate the immunogenicity of M. leprae rosy dealt with the skin or serum reactions of leprosy and would be useful for the preparation of an anti- patients with different mycobacterial antigen prepa- leprosy vaccine. rations. Almost all of these data were critically re- viewed by Bechelli (1971) and by de Almeida.4 More recently, the cross-reactions given by polysaccharide- MATERIALS AND METHODS protein complexes purified from M. leprae with the Sources of M. leprae and M. lepraemurium sera obtained from human leprosy, tuberculosis, and nocardiosis were revealed by Estrada-Parra (1970). -
Laboratory Exercises in Microbiology: Discovering the Unseen World Through Hands-On Investigation
City University of New York (CUNY) CUNY Academic Works Open Educational Resources Queensborough Community College 2016 Laboratory Exercises in Microbiology: Discovering the Unseen World Through Hands-On Investigation Joan Petersen CUNY Queensborough Community College Susan McLaughlin CUNY Queensborough Community College How does access to this work benefit ou?y Let us know! More information about this work at: https://academicworks.cuny.edu/qb_oers/16 Discover additional works at: https://academicworks.cuny.edu This work is made publicly available by the City University of New York (CUNY). Contact: [email protected] Laboratory Exercises in Microbiology: Discovering the Unseen World through Hands-On Investigation By Dr. Susan McLaughlin & Dr. Joan Petersen Queensborough Community College Laboratory Exercises in Microbiology: Discovering the Unseen World through Hands-On Investigation Table of Contents Preface………………………………………………………………………………………i Acknowledgments…………………………………………………………………………..ii Microbiology Lab Safety Instructions…………………………………………………...... iii Lab 1. Introduction to Microscopy and Diversity of Cell Types……………………......... 1 Lab 2. Introduction to Aseptic Techniques and Growth Media………………………...... 19 Lab 3. Preparation of Bacterial Smears and Introduction to Staining…………………...... 37 Lab 4. Acid fast and Endospore Staining……………………………………………......... 49 Lab 5. Metabolic Activities of Bacteria…………………………………………….…....... 59 Lab 6. Dichotomous Keys……………………………………………………………......... 77 Lab 7. The Effect of Physical Factors on Microbial Growth……………………………... 85 Lab 8. Chemical Control of Microbial Growth—Disinfectants and Antibiotics…………. 99 Lab 9. The Microbiology of Milk and Food………………………………………………. 111 Lab 10. The Eukaryotes………………………………………………………………........ 123 Lab 11. Clinical Microbiology I; Anaerobic pathogens; Vectors of Infectious Disease….. 141 Lab 12. Clinical Microbiology II—Immunology and the Biolog System………………… 153 Lab 13. Putting it all Together: Case Studies in Microbiology…………………………… 163 Appendix I. -
Curriculum in Microbiology
CURRICULUM IN BIOLOGICAL SCIENCES YEAR: 2009/2010 YEAR ENTERED SLU: NAME: W# MAJOR HOURS (41) C or Better* MATHEMATICS (8-9) SOCIAL SCIENCES (6) Core Requirements (21 hrs) MATH 161 3 (Anth,Econ,Geog,Gov,Psyc,Poli,Soc) GBIO 151 3 (ACT< 21 MATH 155 – 5hrs) ________________3_________ BIOL 152 1 MATH 162 3 ________________3_________ GBIO 153 3 MATH 163 3 BIOL 154 1 MIC 205 3 or MATH 165 and 200 MICL 207 1 MATH 165 3 GBIO 200 3 MATH 200 5 GBIO 312 3 PHYSICS (8) GBIO 241 _____ 1______ PHYS 191 3 GBIO 341______1______ PLAB 193 1 GBIO 441** 1 ENGLISH (12) PHYS 192 3 ENGL 101 PLAB 194 1 Upper-level Courses (20 hrs) page 2 or 121H 3 ENGL 102 (300/400) or 122H 3 ______ ENGL 230 or 231 or 232 (300/400) 3 ______ ENGL 322 3 (300/400) ______ (300/400) ______ OTHER (10-13) (300/400) FOR. LANGUAGES (12) ART ELECTIVE (Mus,Art,Dnc,Thea) 101 3 3 CHEMISTRY (16) 102 3 LS 102 1 CHEM 121 3 201 3 COMM211 3 CLAB 123 1 202 3 HIST 3 CHEM 122 3 SE 101 0/3 CLAB 124 1 OTHER ELECTIVES (8) CHEM 265 or 261 ___3____ _____________________ CLAB 267 or 263 ___1_____ CHEM 266 or 281 ___3 _____________________ CLAB 268 or 283 ___1_______ TOTAL HOURS 121-125 *Grade of “C” or better in all Biology courses is required in order for the course to count towards the B.S. degree in Biological Sciences **GBIO 441 fulfills requirement for computer literacy ADDITIONAL COURSES: AVERAGES HA HE QP Average CUM: (Adj) MAJOR (Adj) SLU: (Adj) CURRICULUM in BIOLOGICAL SCIENCES I. -
History and Scope of Microbiology the Story of Invisible Organisms
A study material for M.Sc. Biochemistry (Semester: IV) Students on the topic (EC-1; Unit I) History and Scope of Microbiology The story of invisible organisms Dr. Reena Mohanka Professor & Head Department of Biochemistry Patna University Mob. No.:- +91-9334088879 E. Mail: [email protected] MICROBIOLOGY 1. WHAT IS A MICROBIOLOGY? Micro means very small and biology is the study of living things, so microbiology is the study of very small living things normally too small that are usually unable to be viewed with the naked eye. Need a microscope to see them Virus - 10 →1000 nanometers Bacteria - 0.1 → 5 micrometers (Human eye ) can see 0.1 mm to 1 mm Microbiology has become an umbrella term that encompasses many sub disciplines or fields of study. These include: - Bacteriology: The study of bacteria - Mycology: Fungi - Protozoology: Protozoa - Phycology: Algae - Parasitology: Parasites - Virology: Viruses WHAT IS THE NEED TO STUDY MICROBIOLOGY • Genetic engineering • Recycling sewage • Bioremediation: use microbes to remove toxins (oil spills) • Use of microbes to control crop pests • Maintain balance of environment (microbial ecology) • Basis of food chain • Nitrogen fixation • Manufacture of food and drink • Photosynthesis: Microbes are involved in photosynthesis and accounts for >50% of earth’s oxygen History of Microbiology Anton van Leeuwenhoek (1632-1723) (Dutch Scientist) • The credit of discovery of microbial world goes to Anton van Leeuwenhoek. He made careful observations of microscopic organisms, which he called animalcules (1670s). • Antoni van Leeuwenhoek described live microorganisms that he observed in teeth scrapings and rain water. • Major contributions to the development of microbiology was the invention of the microscope (50-300X magnification) by Anton von Leuwenhoek and the implementation of the scientific method. -
A Case of Disseminated Infection Due to Actinomyces Meyeri Involving
Case Report Infection & http://dx.doi.org/10.3947/ic.2014.46.4.269 Infect Chemother 2014;46(4):269-273 Chemotherapy ISSN 2093-2340 (Print) · ISSN 2092-6448 (Online) A Case of Disseminated Infection due to Actinomyces meyeri Involving Lung and Brain Hyun Jung Park1, Ki-Ho Park3, Sung-Han Kim1, Heungsup Sung2, Sang-Ho Choi1, Yang Soo Kim1, Jun Hee Woo1, and Sang-Oh Lee1 Departments of 1Internal Medicine and 2Laboratory Medicine, Asan Medical Center, University of Ulsan College of Medicine, Seoul; 3Department of Internal Medicine, Kyung Hee University School of Medicine, Seoul, Korea Actinomyces meyeri is rarely isolated in cases of actinomycosis. The identification of A. meyeri had historically been difficult and unreliable. With the recent development of 16S ribosomal RNA (16S rRNA) sequencing, Actinomyces species such as A. meyeri can be isolated much more reliably. A. meyeri often causes disseminated disease, which can be secondary to frequent pulmonary infections. A penicillin-based regimen is the mainstay of A. meyeri treatment, with a prolonged course usually re- quired. Here, we report a case of pulmonary actinomycosis with brain abscess caused by A. meyeri that was initially thought to represent lung cancer with brain metastasis. Key Words: Actinomyces; Sequence analysis, RNA; Brain abscess Introduction cies to cause similar clinical disease is largely unknown [2]. Recent developments in microbiological identification tech- Actinomycosis is a chronic infection caused by organisms in niques, especially 16S ribosomal RNA (16S rRNA) sequencing, the genus Actinomyces, with Actinomyces israelii being the have identified other Actinomyces species such as A. meyeri, most common etiologic agent [1]. -
Common Commensals
Common Commensals Actinobacterium meyeri Aerococcus urinaeequi Arthrobacter nicotinovorans Actinomyces Aerococcus urinaehominis Arthrobacter nitroguajacolicus Actinomyces bernardiae Aerococcus viridans Arthrobacter oryzae Actinomyces bovis Alpha‐hemolytic Streptococcus, not S pneumoniae Arthrobacter oxydans Actinomyces cardiffensis Arachnia propionica Arthrobacter pascens Actinomyces dentalis Arcanobacterium Arthrobacter polychromogenes Actinomyces dentocariosus Arcanobacterium bernardiae Arthrobacter protophormiae Actinomyces DO8 Arcanobacterium haemolyticum Arthrobacter psychrolactophilus Actinomyces europaeus Arcanobacterium pluranimalium Arthrobacter psychrophenolicus Actinomyces funkei Arcanobacterium pyogenes Arthrobacter ramosus Actinomyces georgiae Arthrobacter Arthrobacter rhombi Actinomyces gerencseriae Arthrobacter agilis Arthrobacter roseus Actinomyces gerenseriae Arthrobacter albus Arthrobacter russicus Actinomyces graevenitzii Arthrobacter arilaitensis Arthrobacter scleromae Actinomyces hongkongensis Arthrobacter astrocyaneus Arthrobacter sulfonivorans Actinomyces israelii Arthrobacter atrocyaneus Arthrobacter sulfureus Actinomyces israelii serotype II Arthrobacter aurescens Arthrobacter uratoxydans Actinomyces meyeri Arthrobacter bergerei Arthrobacter ureafaciens Actinomyces naeslundii Arthrobacter chlorophenolicus Arthrobacter variabilis Actinomyces nasicola Arthrobacter citreus Arthrobacter viscosus Actinomyces neuii Arthrobacter creatinolyticus Arthrobacter woluwensis Actinomyces odontolyticus Arthrobacter crystallopoietes -
Cell Structure and Function in the Bacteria and Archaea
4 Chapter Preview and Key Concepts 4.1 1.1 DiversityThe Beginnings among theof Microbiology Bacteria and Archaea 1.1. •The BacteriaThe are discovery classified of microorganismsinto several Cell Structure wasmajor dependent phyla. on observations made with 2. theThe microscope Archaea are currently classified into two 2. •major phyla.The emergence of experimental 4.2 Cellscience Shapes provided and Arrangements a means to test long held and Function beliefs and resolve controversies 3. Many bacterial cells have a rod, spherical, or 3. MicroInquiryspiral shape and1: Experimentation are organized into and a specific Scientificellular c arrangement. Inquiry in the Bacteria 4.31.2 AnMicroorganisms Overview to Bacterialand Disease and Transmission Archaeal 4.Cell • StructureEarly epidemiology studies suggested how diseases could be spread and 4. Bacterial and archaeal cells are organized at be controlled the cellular and molecular levels. 5. • Resistance to a disease can come and Archaea 4.4 External Cell Structures from exposure to and recovery from a mild 5.form Pili allowof (or cells a very to attach similar) to surfacesdisease or other cells. 1.3 The Classical Golden Age of Microbiology 6. Flagella provide motility. Our planet has always been in the “Age of Bacteria,” ever since the first 6. (1854-1914) 7. A glycocalyx protects against desiccation, fossils—bacteria of course—were entombed in rocks more than 3 billion 7. • The germ theory was based on the attaches cells to surfaces, and helps observations that different microorganisms years ago. On any possible, reasonable criterion, bacteria are—and always pathogens evade the immune system. have been—the dominant forms of life on Earth. -
History of the Department of Microbiology 1868 – 2009
June 2015 HISTORY OF THE DEPARTMENT OF MICROBIOLOGY 1868 – 2009 University of Illinois at Urbana-Champaign 1 A HISTORY OF THE DEPARTMENT OF MICROBIOLOGY 1868 – 2009 This 141 year history of the Department of Microbiology includes an article (Chapter 1), written and published in 1959 by the Department, which covers the period 1868 to 1959. I joined the Department in 1953, and my recounting of the Department’s history includes personal observations as well as anecdotes told to me by H. O. Halvorson and others. Later I realized what a unique experience it had been to join a first-class department, and I resolved to play a role in maintaining its research stature. Ralph Wolfe 2 Department of Microbiology History of the Headship: 1950 – 1959 Halvor Halvorson 1960 – 1963 Kim Atwood 1963 – 1972 Leon Campbell 1972 – 1982 Ralph DeMoss 1982 – 1987 Samuel Kaplan 1987 – 1990 Jordan Konisky 1990 – 1991 Ralph Wolfe (Acting Head) 1991 – 1997 Charles Miller 1997 – 2002 John Cronan 2003 – 2004 Jeffrey Gardner (Acting Head) 2005 – Present John Cronan 3 Organization of the History of the Department In Chapters 2 to 6 the data are divided into Academic Decades, each containing the following sections: Section I, an overview of the decade; Section II, some events for each year of the decade; Section III, a summary of the research interests, honors received, publications, and invited off-campus lectures or seminars for each faculty member. These data have been obtained from the annual reports of the faculty submitted to the departmental secretary. 4 CHAPTER 1 1868 – 1959 During this time period the name of the Department was Department of Bacteriology (Anecdotes by Ralph Wolfe) A SHORT HISTORY OF THE DEPARTMENT OF BACTERIOLOGY H. -
INTERNATIONAL BULLETIN of BACTERIOLOGICAL NOMENCLATURE and TAXONOMY Vol
INTERNATIONAL BULLETIN OF BACTERIOLOGICAL NOMENCLATURE AND TAXONOMY Vol. 15, No. 3 July 15, 1965 pp. 143-163 THE CLASSIFICATION AND PHYLOGENETIC RELATIONSHIPS OF THE ACTINOMYCETALES ' Leo Pine and Lucille Georg Communicable Disease Center, Public Health Service, U. S. Department of Health, Education, and Welfare, Atlanta, Georgia SUMMARY. The taxonomic and phylogenetic re- lationships of members of the order Actino- mycetales have been examined. On the basis of cellular and colony morphology, cell wall composition, fermentation products, and cer- tain physiological characteristics, the taxa within the family Actinomycetaceae were divided into two groups. Each group was closely related to members of the family -Lactobacillaceae. One group consisted of Actinomyces israelii, -A. naeslundii, ,A. pro- pionicus, Nocardia dentocariosus and Odonto- myces viscosis ("hamster organism"). The second group consisted of bovis, ,A. erik- sonii, and Lactobacillus bifidusA. type 11 (k parabifidus). This latter organism was re- named Actinomyces pa.rabifidus nov. comb. because its morphological, physiological and biochemical characteristics related it to the members of both groups of the genus Actino- myces. The families Streptomycetaceae and Mycobacteriaceae appeared more closely re- lated to the family Corynebacteriaceae than to the family Actinomycetaceae. The use of certain criteria for classification and deter- mination of phylogenetic relationships was discussed. We have stressed those areas in which necessasy information is lacking. A report to -
Actinomycetes (Branching Bacteria ): Dr.Jawad K
College of Medicine Microbiology Medical bacteriology Actinomycetes (branching bacteria ): Dr.Jawad K. Al-Khafaji ----------------------------------------------------------------------------------------- Actinomycete (fungus-like bacteria) resembles fungus as it forms mycelia and resemble bacteria as it has not true nucleus. Important properties: 1. Actinomycetes for many years were classified as fungi because the actinomycetes are form long branching filaments that resemble the hyphae of fungi .But they are reclassified as bacteria since they are thin, possesses cell wall containing muramic acid, it has prokaryotic nuclei and susceptible to bacterial antibiotic agents. 2. Actinomycetes are common in soil .There are two medically important organisms, Actinomyces israelii and Nocardia asteroids . A.israelii is anaerobe that forms part of normal flora of oral cavity. N.asteroides is aerobe and is found in environment, particularly in the soil. 3. They are gram-positive bacilli. Many isolates of N.asteroides are weakly acid fast stain. 4. The A israelii is strict anaerobic; whereas N.asteroides is grow under strict aerobic conditions. Transmission : A.israelii infection is acquired endogenously, from normal oral flora. There is no person to person spread. Infection of N.asteroides is acquired from soil by airborne route. Actinomycetes infections are not transmitted from person to person ( the diseases are not communicable ). Pathogenesis : Actinomycetes are responsible for three human infections. 1. Actinomycosis is caused by A.israelii in human or by A.bovis in cattle. The disease is chronic suppurative and granulomatous infection that produces pyogenic lesions with interconnecting sinus tract that contain sulfur granules. Three forms are (i)Cervicofacial lesion is most common ,especially among poor dental hygiene and tooth extraction.