INTERNATIONAL BULLETIN of BACTERIOLOGICAL NOMENCLATURE and TAXONOMY Vol
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INTERNATIONAL BULLETIN OF BACTERIOLOGICAL NOMENCLATURE AND TAXONOMY Vol. 15, No. 3 July 15, 1965 pp. 143-163 THE CLASSIFICATION AND PHYLOGENETIC RELATIONSHIPS OF THE ACTINOMYCETALES ' Leo Pine and Lucille Georg Communicable Disease Center, Public Health Service, U. S. Department of Health, Education, and Welfare, Atlanta, Georgia SUMMARY. The taxonomic and phylogenetic re- lationships of members of the order Actino- mycetales have been examined. On the basis of cellular and colony morphology, cell wall composition, fermentation products, and cer- tain physiological characteristics, the taxa within the family Actinomycetaceae were divided into two groups. Each group was closely related to members of the family -Lactobacillaceae. One group consisted of Actinomyces israelii, -A. naeslundii, ,A. pro- pionicus, Nocardia dentocariosus and Odonto- myces viscosis ("hamster organism"). The second group consisted of bovis, ,A. erik- sonii, and Lactobacillus bifidusA. type 11 (k parabifidus). This latter organism was re- named Actinomyces pa.rabifidus nov. comb. because its morphological, physiological and biochemical characteristics related it to the members of both groups of the genus Actino- myces. The families Streptomycetaceae and Mycobacteriaceae appeared more closely re- lated to the family Corynebacteriaceae than to the family Actinomycetaceae. The use of certain criteria for classification and deter- mination of phylogenetic relationships was discussed. We have stressed those areas in which necessasy information is lacking. A report to the Subgroup on Taxonomy of Microaerophilic Actinomyce s, International Committee on Bacteriological Nomenclature. Page 144 INTERNATIONAL BULLETIN Although there have been several publications concerned with the classification of the aerobic actinomycetes (Gottlieb 1959- 1960; Krasilnikov 1960; Lechevalier, Solotorovsky and McDurmont 1961; Davis and Freer 1961; Selvestri, Turri, Hill and Gilardi 1962), only a few have dealt with the anaer- obic actinomycetes and their relationships within the order Actinomycetales (Cummins and Harris 1958, 1959; Buchanan and Pine 1962; Cummins 1962; Overman and Pine 1963). Hesseltine (1960) considered both groups but his discussion of taxonomic and evolutionary patterns dealt primarily with the nonpathogenic aerobic actinomycete s. In addition, in recent years several new taxa of actinomycetes have been described (Howell, Murphy, Paul and Stephan 1959; Davis and Freer 1960; Gilmour, Howell and Bibby 1961; Buchanan and Pine 1962; Howell 1963; Georg, Robertstad, Brinkman and Hicklin 1964). This report deals with the order as a whole with emphasis on the anaerobic to facultative organ- isms. It attempts to incorporate the newly described genera and associated information into a classification scheme that is not only useful but which also reflects their phylogenetic relations hips . RelationshiD of the actinomvcetes to other groups of the plant kingdom In his analysis of the comparative characteristics of the actinomycetes, fungi and bacteria, He s seltine (19 60) sup- ported the view that the actinomycetes represented a sepa- rate phylogenetic line. Our conclusions, based upon essen- tially the same considerations but including recent infor- mation, is that the actinomycetes should be considered as bacteria and as such should be classified in the class Schizomycetes (Breed 1957), order Actinomycetales. This conclusion is based upon the following considerations: 1. The organisms of this order are all of bacterial size and the internal structures such as the nucleus, membran- ous organelles, ribosomes, cell membrane, cell wall, and absence of mitochondria would appear to place them without question in the class Schizomycetes. Studies particularly appropriate to this consideration are those of Moore and Chapman (1959) on the growth of a streptomycete, Glauert and Hopwood (1959) and Hopwood and Glauert (1960) on Page 145 BACTERIOLOGICAL NOMENCLATURE AND TAXONOMY Streptomyces coelicolor, Koike and Takeya (1961) on myco- bacteria, Edwards and Gordon (1962) on Actinomyces bovis, Gordon and Edwards (1963) on Dermatophilus congolensis, Imaeda and Ogura (1963) on Mycobacterium, and Overman and Pine (1963) on Lactobacillus bifidus and on 4 species of Actinomyces. 2. All the organisms of this order that have been tested are sensitive to antibacterial antibiotics but are resistant to those affecting only the fungi such as griseofulvin, ny- statin, amphotericin and candicidin (Lechevalier, Acker, Corke, Haenseler and Waksman 1960; Feingold 1963; Lam- pen 1963). With increased knowledge of the mechanisms of functions of the antibiotics (Feingold 1963) these differential antibiotic activities are conside red to have phylogenetic imp0rt an ce . 3. Cell wall composition, of those actinomycetes tested by Cummins (1962), as compared to recognized bacterial and fungal species (Cummins and Harris 1956) showed a direct relationship between the members of the order Ac- tinomycetales and other bacteria. This relationship is best described by the presence in the cell walls of a combination of amino acids, hexosamines, and sugars (Salton 1962) and by the presence of muramic acid and diaminopimelic acid or lysine. Muramic acid, diaminopimelic acid and lysine are not found in cell walls of the members of the phylum Mychota (Davis 1961). The higher fungi have shown only the presence of sugars and their amino derivatives. All the organisms of the order Actinomycetale s are Gram-positive, a further reflection of their cell wall composition (Salton 1962), and consequently, of those tested, most have shown a high degree of sensitivity to penicillin. 4. Finally the infection of actinomycetes by phage strongly suggests the bacterial nature of this group since such in- fections in the Eumycetes have been limited to a single re- port. Carvajal(l953) has described industrial fermentations by Streptomyces which became infected with phage. Brad- ley and Anderson (1958) and more recently Bradley (1964) have reported on the infection of Streptomyces and Nocardia with phage. The morphological description of cells in cul- ture and electron microscopic observations of ultrathin sections of Actinomyces propionicus show most probably the presence of a lysogenic phage (Buchanan and Pine 1962; Overman and Pine 1963). Page 146 INTERNATIONAL BULLETIN Although further arguments could be presented, the above considerations appear to be sufficient to retain this group within the Schizomycetes, order Actinomycetales. The order Actinomycetales in the following classification is a morphological order, i. e., all of the members relate to one another by the ability to form, under the appropriate conditions, filamentous or branched cells and the ability to form mycelial or pseudomycelial colonies. Although one immediately becomes conscious of certain weaknesses in or possible exceptions to this description, other physiological and biochemical properties serve well to maintain the in- tegrity of the order. However, as will be pointed out later, a stronger phylogenetic classification appears to result if branched cells or mycelium formation is not given primary importance. In order to arrange the various families and member genera into a functional sequence, with reasonable phylo- genetic relationships, certain basic premises are made. First, the concept of Oparin(1938) is accepted that evolution proceeded from the lesser to greater enzymatic complexity, that the heterotroph is more simple enzymatically than the autotroph. Secondly, it is assumed that the heterotrophs within the order became more complex as the nutritional demands became simpler, and as the organisms proceed from a strictly anaerobic growth through a facultative one to one which is strictly aerobic. In our classification no direction of the phylogenetic progression is inferred, nor is it of importance in delineating mutual relationships. Recog- nizing that the loss of an enzyme through mutation is more easily accomplished than the gain of an enzyme, we sub- scribe to the idea of evolution progressing in a manner of a pair of cones placed apex to apex as described by Pirie (1957). In this the progression from heterotrophy to auto- trophy is compared as the progression from the base to the apex of one cone and cellular differentiation and enzymatic loss then progresses from the apex of the second cone to its base. Enzymatic complexity is ,intimately connected to morpho- logical complexity. In this regard, the assumption is made that a spherical cell and a rod are of equal complexity, for the mechanisms involved in forming a cell wall in the COC- CUS would not appear to require any fewer enzymes than in the rod (Cole 1962,1964). The third premise states that the Page 147 BACTERIOLOGICAL NOMENCLATURE AND TAXONOMY bacterial rod is no less complex than a branched or fila- mentous organism. This is predicated in part on the results of Nickerson and Webb (1956) and Webb (1963), who showed that rod-shaped organisms can be induced to form long fila- mentous threads with minor element deficiency or folic acid antagonists. It is obvious that in these circumstances, cross wall formation was impaired and that growing tips were maintained at only 2 points at most. The third premise is further supported by ,L. bifidus. In low concentrations of muramic acid or its precursors this bacterium changes from an essentially rod-shaped organism budding at the ends to one which is multibranched and atypical in its morphology (Glick, Sall, Zulliken and Mudd 1960) and in which growing