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Article Evolutionary Dynamics of the OR Gene Repertoire in Teleost Fishes
bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Article Evolutionary dynamics of the OR gene repertoire in teleost fishes: evidence of an association with changes in olfactory epithelium shape Maxime Policarpo1, Katherine E Bemis2, James C Tyler3, Cushla J Metcalfe4, Patrick Laurenti5, Jean-Christophe Sandoz1, Sylvie Rétaux6 and Didier Casane*,1,7 1 Université Paris-Saclay, CNRS, IRD, UMR Évolution, Génomes, Comportement et Écologie, 91198, Gif-sur-Yvette, France. 2 NOAA National Systematics Laboratory, National Museum of Natural History, Smithsonian Institution, Washington, D.C. 20560, U.S.A. 3Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, Washington, D.C., 20560, U.S.A. 4 Independent Researcher, PO Box 21, Nambour QLD 4560, Australia. 5 Université de Paris, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France 6 Université Paris-Saclay, CNRS, Institut des Neurosciences Paris-Saclay, 91190, Gif-sur- Yvette, France. 7 Université de Paris, UFR Sciences du Vivant, F-75013 Paris, France. * Corresponding author: e-mail: [email protected]. !1 bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Abstract Teleost fishes perceive their environment through a range of sensory modalities, among which olfaction often plays an important role. -
Acanthopterygii, Bone, Eurypterygii, Osteology, Percomprpha
Research in Zoology 2014, 4(2): 29-42 DOI: 10.5923/j.zoology.20140402.01 Comparative Osteology of the Jaws in Representatives of the Eurypterygian Fishes Yazdan Keivany Department of Natural Resources (Fisheries Division), Isfahan University of Technology, Isfahan, 84156-83111, Iran Abstract The osteology of the jaws in representatives of 49 genera in 40 families of eurypterygian fishes, including: Aulopiformes, Myctophiformes, Lampridiformes, Polymixiiformes, Percopsiformes, Mugiliformes, Atheriniformes, Beloniformes, Cyprinodontiformes, Stephanoberyciformes, Beryciformes, Zeiformes, Gasterosteiformes, Synbranchiformes, Scorpaeniformes (including Dactylopteridae), and Perciformes (including Elassomatidae) were studied. Generally, in this group, the upper jaw consists of the premaxilla, maxilla, and supramaxilla. The lower jaw consists of the dentary, anguloarticular, retroarticular, and sesamoid articular. In higher taxa, the premaxilla bears ascending, articular, and postmaxillary processes. The maxilla usually bears a ventral and a dorsal articular process. The supramaxilla is present only in some taxa. The dentary is usually toothed and bears coronoid and posteroventral processes. The retroarticular is small and located at the posteroventral corner of the anguloarticular. Keywords Acanthopterygii, Bone, Eurypterygii, Osteology, Percomprpha following method for clearing and staining bone and 1. Introduction cartilage provided in reference [18]. A camera lucida attached to a Wild M5 dissecting stereomicroscope was used Despite the introduction of modern techniques such as to prepare the drawings. The bones in the first figure of each DNA sequencing and barcoding, osteology, due to its anatomical section are arbitrarily shaded and labeled and in reliability, still plays an important role in the systematic the others are shaded in a consistent manner (dark, medium, study of fishes and comprises a major percent of today’s and clear) to facilitate comparison among the taxa. -
Phallostethus Cuulong, a New Species of Priapiumfish (Actinopterygii: Atheriniformes: Phallostethidae) from the Vietnamese Mekong
Zootaxa 3363: 45–51 (2012) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2012 · Magnolia Press ISSN 1175-5334 (online edition) Phallostethus cuulong, a new species of priapiumfish (Actinopterygii: Atheriniformes: Phallostethidae) from the Vietnamese Mekong KOICHI SHIBUKAWA1, DINH DAC TRAN2 & LOI XUAN TRAN2 1Nagao Natural Environment Foundation, 3-10-10 Shitaya, Taito-ku, Tokyo 110-0004, Japan. E-mail: [email protected] 2College of Aquaculture and Fisheries, Can Tho University, 3-2 Street, Can Tho, Vietnam. E-mail: [email protected]; [email protected] Abstract A new species of priapiumfish, Phallostethus cuulong, is described based on nine specimens collected from the Vietnam- ese Mekong. This is the third species of the genus, following the type species P. dunckeri (from Malay peninsula) and P. lehi (from northwestern Borneo), and distinguished from them by having: seven serrae on the second ctenactinium in adult males (vs. five in P. dunckeri and eight in P. le h i); 25–26 caudal vertebrae (vs. 27 in P. dunckeri and 28 in P. le h i ); approx- imately 5–19 teeth on paradentary (vs. 15–20 and 28 or more in P. dunckeri and P. le h i, respectively). All six examined males are dextral (vs. one and two known males are sinistral and dextral respectively in P. dunckeri, and all four know males are sinistral in P. le h i ). Sexual dimorphism is also found in the number of precaudal vertebrae, i.e., 13–14 in males and 11–12 in females (vs. sexual dimorphism is not found in number of precaudal vertebrae of P. -
Proceedings of the United States National Museum
: ; PROCEEDINGS OF THE UNITED STATES NATIONAL MUSEUM issued iMl5(\ji s)"Si hy the SMITHSONIAN INSTITUTION U. S. NATIONAL MUSEUM Vol. 84 Washington: 1937 No. 3007 NOTES ON PHALLOSTEITHID FISHES By George S. Myers Stanford University, California Various notes on the remarkable little fishes of the Malayan family Phallostethidae accumulated while I was in charge of the division of fishes of the United States National Museum, and it seems oppor- tune to publish them at this time. Most of the material reported on is in the National Museum. In a recent paper (Myers, 1935, p. 6) I erected a new suborder, Phallostethoidea, for this family, which I placed next to the Mugilo- idea and the Poljniemoidea in the Percesoces. The recent work of Bailey (1936) appears to uphold my conclusion that the Phalloste- thidae are not cyprinodonts. The follow^ing synopsis of the genera, based largely on the priapium of the male, will replace that given in my 1928 paper SYNOPSIS OF THE GENEEA OF PHALLOSTETHIDAE a\ Toxactinium present, a sbieldlike pulvinulus covering its base. 6\ Anal fin very long, of 20 to 28 rays ; the single ctenactinium serrated jaws equal or lower slightly included ; first dorsal ; not described; abdomen of female with a groove- -Phallostethus Regan b^ Anal fin moderate, of 14 or 15 rays ; the single ctenactinium not serrated ; lower jaw projecting ; first dorsal of one ray abdomen of female without groove Phenacostethus Myers 92759—36 137 138 PROCEEDINGS OF THE NATIONAL MUSEUM vol.84 if present small and not shield- a*. ToxactiJiium absent ; pulviimlus or disk-shaped, c*. -
KAJIANILMIAHIKAN PELANGI {Marosatherina Ladigesi (Ahl 1936)} FAUNA ENDEMIK SULAWESI [Scientific Review of a Rainbow Fish {Marosa
Berita Biologi 8(6) - Desember 2007 KAJIANILMIAHIKAN PELANGI {Marosatherina ladigesi (Ahl 1936)} FAUNA ENDEMIK SULAWESI [Scientific review of a rainbow fish {Marosatherina ladigesi (Ahl 1936)} an endemic fauna of Sulawesi] Renny Kurnia Hadiaty Bidang Zoologi, Puslit Biologi-LIPI Jl. Raya Bogor Km 46, Cibinong 16911; email13: [email protected] ABSTRACT Marosatherina ladigesi is one of the famous rainbow fish species from Sulawesi. This endemic fish species from Sulawesi is one of the Indonesian export commodity since more than 30 years ago. All of the export specimens come from the wild habitat. The anxiousness of the extinction of this species stated in the redlist of IUCN since 1994. Two field work of Maros Karst Project conducted in 2006, 2007 and an international expedition in 2007 showed the decreasing population of this species. The results of the three field trips showed the difficulties to get M. ladigesi in the streams. Taxonomical status and classification, coloration, sex dimorphism and distribution discussed. Kata kunci: Marosatherina ladigesi, endemik, langka, Sulawesi PENDAHULUAN Ikan Hias Indonesia (PIHI) menggunakan satu jenis Ikan Pelangi atau 'rainbow fish' sudah lama Pelangi Sulawesi, yaitu jenis Marosatherina ladigesi dikenal oleh masyarakat Indonesia. Dinamai ikan sebagai logo dari organisasi tersebut. Pelangi karena pola warnanya yang menyerupai Ikan Pelangi Sulawesi sangat populer di pelangi. Ikan ini cukup populer di kalangan penggemar kalangan penggemar ikan hias di dunia, hasil pencarian ikan hias, karena mudah dipelihara dan harganya pun di situs internet diperoleh 2080 judul untukM ladigesi. tidak terlalu mahal. Ikan Pelangi yang beredar di Ironisnya, masyarakat yang tinggal di habitat asli ikan pasaran dalam negeri berasal dari Propinsi Papua. -
Evolution of Remarkable Structural Novelties in Its Jaws and External Genitalia^
OSTEOLOGY OF THE MALAYSIAN PHALLOSTETHOID FISH CfRATOSTETHUS BICORNIS, WITH A DISCUSSION OF THE EVOLUTION OF REMARKABLE STRUCTURAL NOVELTIES IN ITS JAWS AND EXTERNAL GENITALIA^ TYSON R. Roberts- Abstract. The osteology of the phallostethoid an externalized pelvic bone. Phallostetliidae ap- Ccratostethtis bicornis (Regan) is described and parently arose from Neostcthus. The toxactinium, figured. Comparative observations on osteology of the main externalized bony element in the atherinoids, cyprinodontoids, and other phallo- priapium of Phallostethidae, is derived from the stethoids are also given. Phallostethoids apparently inner pulvinular bone, which is the anteriormost originated from atherinids. The most closely internal liony element in tlie priapium of related atherinids are Taeniomembrasinae. The Neostetliidae. The inner pulvinular bone of Neo- osteological observations tend to support the idea stethus bears a small lateral projection, the that atherinoids and cyprinodontoids are related, pulvinular spine, which may be a rudimentary as in toxactinium. structure of the postulated ])y Rosen ( 1964 ) proposing the The papillary ])one, order Atheriniformes. Atherinifomis exhil^it a intimately associated with the genital pore, is widespread tendency to develop teeth with two relatively simple in Gulaphallinae and Phallo- and three cusps, especially on the pharyngeal stethidae, ])ut in Neostethinae it divides into bones. The trend is pronounced in cyprinodontoids, numerous thin processes each bearing a booklet at exocoetoids, and scomberesocids, practically absent its tip. A comprehensive definition is given for in atherinoids, and completely absent in phallo- the superfamily Phallostethoidea. All taxa used stethoids and belonids. in this paper were proposed l^y previous authors. The Phallostethoidea can be divided into two Oviparous Atheriniformes with internal fertiliza- families, Phallostethidae and Neostethidae. -
Multi-Locus Fossil-Calibrated Phylogeny of Atheriniformes (Teleostei, Ovalentaria)
Molecular Phylogenetics and Evolution 86 (2015) 8–23 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Multi-locus fossil-calibrated phylogeny of Atheriniformes (Teleostei, Ovalentaria) Daniela Campanella a, Lily C. Hughes a, Peter J. Unmack b, Devin D. Bloom c, Kyle R. Piller d, ⇑ Guillermo Ortí a, a Department of Biological Sciences, The George Washington University, Washington, DC, USA b Institute for Applied Ecology, University of Canberra, Australia c Department of Biology, Willamette University, Salem, OR, USA d Department of Biological Sciences, Southeastern Louisiana University, Hammond, LA, USA article info abstract Article history: Phylogenetic relationships among families within the order Atheriniformes have been difficult to resolve Received 29 December 2014 on the basis of morphological evidence. Molecular studies so far have been fragmentary and based on a Revised 21 February 2015 small number taxa and loci. In this study, we provide a new phylogenetic hypothesis based on sequence Accepted 2 March 2015 data collected for eight molecular markers for a representative sample of 103 atheriniform species, cover- Available online 10 March 2015 ing 2/3 of the genera in this order. The phylogeny is calibrated with six carefully chosen fossil taxa to pro- vide an explicit timeframe for the diversification of this group. Our results support the subdivision of Keywords: Atheriniformes into two suborders (Atherinopsoidei and Atherinoidei), the nesting of Notocheirinae Silverside fishes within Atherinopsidae, and the monophyly of tribe Menidiini, among others. We propose taxonomic Marine to freshwater transitions Marine dispersal changes for Atherinopsoidei, but a few weakly supported nodes in our phylogeny suggests that further Molecular markers study is necessary to support a revised taxonomy of Atherinoidei. -
Proquest Dissertations
GENE FLOW & DISPERSAL AS FACTORS MEDIATING POPULATION DIVERGENCE, ADMIXTURE AND SPECIATION IN FISHES by RyanP Walter B.Sc, SUNY Brockport, NY, 2000 M.Sc, SUNY Brockport, NY, 2002 A Dissertation Submitted to the Faculty of Graduate Studies through the Great Lakes Institute for Environmental Research in partial fulfillment of the Requirements for the Degree of Doctor of Philosophy at the University of Windsor Windsor, Ontario, Canada 2009 © 2009 Ryan Walter Library and Archives Bibliotheque et 1*1 Canada Archives Canada Published Heritage Direction du Branch Patrimoine de I'edition 395 Wellington Street 395, rue Wellington OttawaONK1A0N4 Ottawa ON K1A 0N4 Canada Canada Your file Votre re'terence ISBN: 978-0-494-82070-4 Our file Notre reference ISBN: 978-0-494-82070-4 NOTICE: AVIS: The author has granted a non L'auteur a accorde une licence non exclusive exclusive license allowing Library and permettant a la Bibliotheque et Archives Archives Canada to reproduce, Canada de reproduire, publier, archiver, publish, archive, preserve, conserve, sauvegarder, conserver, transmettre au public communicate to the public by par telecommunication ou par I'lnternet, preter, telecommunication or on the Internet, distribuer et vendre des theses partout dans le loan, distribute and sell theses monde, a des fins commerciales ou autres, sur worldwide, for commercial or non support microforme, papier, electronique et/ou commercial purposes, in microform, autres formats. paper, electronic and/or any other formats. The author retains copyright L'auteur conserve la propriete du droit d'auteur ownership and moral rights in this et des droits moraux qui protege cette these. Ni thesis. Neither the thesis nor la these ni des extraits substantiels de celle-ci substantial extracts from it may be ne doivent etre imprimes ou autrement printed or otherwise reproduced reproduits sans son autorisation. -
Training Manual Series No.15/2018
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by CMFRI Digital Repository DBTR-H D Indian Council of Agricultural Research Ministry of Science and Technology Central Marine Fisheries Research Institute Department of Biotechnology CMFRI Training Manual Series No.15/2018 Training Manual In the frame work of the project: DBT sponsored Three Months National Training in Molecular Biology and Biotechnology for Fisheries Professionals 2015-18 Training Manual In the frame work of the project: DBT sponsored Three Months National Training in Molecular Biology and Biotechnology for Fisheries Professionals 2015-18 Training Manual This is a limited edition of the CMFRI Training Manual provided to participants of the “DBT sponsored Three Months National Training in Molecular Biology and Biotechnology for Fisheries Professionals” organized by the Marine Biotechnology Division of Central Marine Fisheries Research Institute (CMFRI), from 2nd February 2015 - 31st March 2018. Principal Investigator Dr. P. Vijayagopal Compiled & Edited by Dr. P. Vijayagopal Dr. Reynold Peter Assisted by Aditya Prabhakar Swetha Dhamodharan P V ISBN 978-93-82263-24-1 CMFRI Training Manual Series No.15/2018 Published by Dr A Gopalakrishnan Director, Central Marine Fisheries Research Institute (ICAR-CMFRI) Central Marine Fisheries Research Institute PB.No:1603, Ernakulam North P.O, Kochi-682018, India. 2 Foreword Central Marine Fisheries Research Institute (CMFRI), Kochi along with CIFE, Mumbai and CIFA, Bhubaneswar within the Indian Council of Agricultural Research (ICAR) and Department of Biotechnology of Government of India organized a series of training programs entitled “DBT sponsored Three Months National Training in Molecular Biology and Biotechnology for Fisheries Professionals”. -
NUTRAFIN Nr.4-USA 22-03-2004 10:29 Pagina 1
NUTRAFIN Nr.4-USA 22-03-2004 10:29 Pagina 1 Aquatic News 2,50 US$/3,50 Can$/2,50 Euro/2 £/5 Aus$ £/5 2,50 US$/3,50 Can$/2,50 Euro/2 ÉÄw@ÉÄw@ ZZ y|á{xáy|á{xá #4 Issue #4 - 2004 Issue NUTRAFIN Nr.4-USA 22-03-2004 10:29 Pagina 2 DO YOU KNOW THE FACTS OF LIGHT? A strong, vibrant light is essential to the growth and health of your aquarium. This much you probably already know. But did you know that the average fluorescent tube loses LIFE-GLO 2 High-noon spectrum for aquariums, terrariums & vivariums about 50% of its lighting output quality within one year? This results in a distorted spectrum, inefficient plant and coral growth, and less intense fish colors. POWER-GLO Promotes coral, invertebrate and plant growth GLO offers a wide variety of tubes for every aquarium setup. They also provide you with a re- minder sticker to place either directly on the tube AQUA-GLO Intensifies fish colors and promotes plant growth or on the aquarium itself to remind you when it’s time to replace the bulb. FLORA-GLO Optimizes plant growth Or, if you prefer, sign up online at www.hagen.com and we’ll send you a reminder when it’s time. MARINE-GLO Promotes marine reef life So, replace your tubes regularly. You’ll love the results and your fish will love their home. SUN-GLO General purpose aquarium lighting NUTRAFIN Nr.4-USA 22-03-2004 10:29 Pagina 3 Editorial Editorial Dear Reader, "silent as a fish in water", fishes The first three issues of can communicate, often better NUTRAFIN Aquatic News than people.. -
Status Taksonomi Iktiofauna Endemik Perairan Tawar Sulawesi (Taxonomical Status of Endemic Freshwater Ichthyofauna of Sulawesi) Renny Kurnia Hadiaty
Jurnal Iktiologi Indonesia, 18(2): 175-190 DOI: https://doi.org/10.32491/jii.v18i2.428 Ulas-balik Status taksonomi iktiofauna endemik perairan tawar Sulawesi (Taxonomical status of endemic freshwater ichthyofauna of Sulawesi) Renny Kurnia Hadiaty Laboratorium Iktiologi, Bidang Zoologi, Puslit Biologi-LIPI Jl. Raya Bogor Km 46, Cibinong 16911 Diterima: 25 Mei 2018; Disetujui: 5 Juni 2018 Abstrak Perairan tawar Pulau Sulawesi merupakan habitat beragam iktiofauna endemik Indonesia yang tidak dijumpai di bagian manapun di dunia ini. Dari perairan tawar pulau ini telah dideskripsi 68 spesies ikan endemik dari tujuh familia, tergo- long dalam empat ordo. Ke tujuh familia tersebut adalah Adrianichthyiidae (19 spesies, dua genera), Telmatherinidae (16 spesies, empat genera), Zenarchopteridae (15 spesies, tiga genera), Gobiidae (14 spesies, empat genera), Anguilli- dae (satu spesies, satu genus), Eleotridae dua spesies, dua genera), dan Terapontidae (satu spesies, satu genus). Seba- gian besar spesies endemik di P. Sulawesi hidup di perairan danau (45 spesies atau 66,2%), 23 spesies hidup di perairan sungai. Spesies pertama yang dideskripsi dari P. Sulawesi adalah Glossogobius celebius oleh Valenciennes tahun 1837, spesimen tipenya disimpan di Museum Paris. Delapan spesies ditemukan pada abad 19, sampai sebelum kemerdekaan Indonesia telah ditemukan 29 spesies, setelah merdeka ditemukan 39 spesies di P. Sulawesi. Di awal penemuan spesies baru, spesimen tipe disimpan di museum luar negeri, namun sejak tahun 1990 dipelopori oleh Dr. Maurice Kottelat spesimen tipe disimpan di Museum Zoologicum Bogoriense (MZB), Bidang Zoologi, Pusat Penelitian Biologi. Sampai saat ini spesimen tipe iktiofauna dari P. Sulawesi disimpan di 27 museum dari 11 negara di dunia, terbanyak di Ame- rika (8), Jerman (6), Swiss (3), Australia, dan Belanda (2), sedangkan di Austria, Jepang, Perancis, Singapura, Inggris, dan Indonesia masing-masing satu museum. -
Evolutionary History and Whole Genome Sequence of Pejerrey (Odontesthes Bonariensis): New Insights Into Sex Determination in Fishes
Evolutionary History and Whole Genome Sequence of Pejerrey (Odontesthes bonariensis): New Insights into Sex Determination in Fishes by Daniela Campanella B.Sc. in Biology, July 2009, Universidad Nacional de La Plata, Argentina A Dissertation submitted to The Faculty of The Columbian College of Arts and Sciences of The George Washington University in partial fulfillment of the requirements for the degree of Doctor of Philosophy January 31, 2015 Dissertation co-directed by Guillermo Ortí Louis Weintraub Professor of Biology Elisabet Caler Program Director at National Heart, Lung and Blood Institute, NIH The Columbian College of Arts and Sciences of The George Washington University certifies that Daniela Campanella has passed the Final Examination for the degree of Doctor of Philosophy as of December 12th, 2014. This is the final and approved form of the dissertation. Evolutionary History and Whole Genome Sequence of Pejerrey (Odontesthes bonariensis): New Insights into Sex Determination in Fishes Daniela Campanella Dissertation Research Committee: Guillermo Ortí, Louis Weintraub Professor of Biology, Dissertation Co-Director Elisabet Caler, Program Director at National Heart, Lung and Blood Institute, NIH, Dissertation Co-Director Hernán Lorenzi, Assistant Professor in Bioinformatics Department, J. Craig Venter Institute Rockville Maryland, Committee Member Jeremy Goecks, Assistant Professor of Computational Biology, Committee Member ! ""! ! Copyright 2015 by Daniela Campanella All rights reserved ! """! Dedication The author wishes to dedicate this dissertation to: My love, Ford, for his unconditional support and inspiration. For teaching me that admiration towards each other’s work is the fundamental fuel to go anywhere. My family and friends, for being there, meaning “there” everywhere and whenever. My grandpa Hugo, a pejerrey lover who knew how to fish, cook and enjoy the “silver arrows”.