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ENCODE Consortium Meeting ENCODE Consortium Meeting June 17-19, 2008 Hilton Washington DC/Rockville Executive Meeting Center Rockville, Maryland PARTICIPANTS Bradley Bernstein Piero Carninci, Ph.D. Molecular Pathology Unit Leader Massachusetts General Hospital Functional Genomics Technology Team and 149 13th Street Omics Resource Development Unit Charlestown, MA 02129 Deputy Project Director (617) 726-6906 LSA Technology Development Group (617) 726-5684 Fax Omics Science Center [email protected] RIKEN Yokohama Institute 1-7-22 Suehiro-cho, Tsurumi-ku Ewan Birney Yokohama 230-0045 Joint Team Leader Japan Panda Group Nucleotides +81-(0)901-709-2277 Panda Coordination and Outreach [email protected] Panda Metabolism European Molecular Biology Laboratory Philip Cayting European Bioinformatics Institute Gerstein Laboratory Hinxton Outstation Department of Molecular Biophysics and Wellcome Trust Genome Campus Biochemistry Hinxton, Cambridge CB10 1SD Yale University United Kingdom P.O. Box 208114 +44-(0)1223-494 444, ext. 4420 New Haven, CT 06520-8114 +44-(0)1223-494 494 Fax (203) 432-6337 [email protected] [email protected] Michael Brent, Ph.D. Howard Y. Chang, M.D., Ph.D. Professor Assistant Professor Center for Genome Sciences Stanford University Washington University Center for Clinical Sciences Research, Campus Box 8510 Room 2155C 4444 Forest Park 269 Campus Drive Saint Louis, MO 63108 Stanford, CA 94305 (314) 286-0210 (650) 736-0306 [email protected] [email protected] James Bentley Brown Mike Cherry, Ph.D. Graduate Student Researcher Associate Professor Graduate Program in Applied Science and Department of Genetics Technology Stanford University Bickel Group 300 Pasteur Drive University of California, Berkeley Stanford, CA 94305-5120 Room 2 (650) 723-7541 1246 Hearst Avenue [email protected] Berkeley, CA 94702 (510) 703-4706 [email protected] Francis S. Collins, M.D., Ph.D. Laura Dillon, M.S. Director Program Analyst National Human Genome Research Institute Division of Extramural Research National Institutes of Health National Human Genome Research Institute Room 4B09 National Institutes of Health MSC 2152 Suite 4076 31 Center Drive MSC 9305 Bethesda, MD 20892-2152 5635 Fishers Lane (301) 594-7185 Bethesda, MD 20892-9305 (301) 402-0837 Fax (301) 435-2027 [email protected] (301) 480-2770 Fax [email protected] Christine Colvis, Ph.D. Program Director Sarah Quelen Djebali, Ph.D. National Institute on Drug Abuse Bioinformatics and Genomics Program National Institutes of Health Center for Genomic Regulation Neuroscience Center, Room 4282 Doctor Aiguader 88 MSC 9555 Barcelona 8003 6001 Executive Boulevard Spain Bethesda, MD 20892-9555 +34 933160110 (301) 435-1323 [email protected] [email protected] Michael O. Dorschner, Ph.D. Greg Crawford, Ph.D. Instructor Assistant Professor Division of Oncology Duke Institute for Genome Sciences & Policy Department of Medicine Duke University University of Washington Center for Interdusciplinary Engineering, WTC East, Suite 600 Medicine and Applied Sciences, Room 2353B 2211 Elliott Avenue 101 Science Drive Seattle, WA 98121 Durham, NC 27708 (206) 267-1091, ext. 211 (919) 684-8196 [email protected] [email protected] Tim Dreszer, M.S. Job Dekker, Ph.D., M.S. Genome Browser Software Developer Assistant Professor Center for Biomolecular Science and Program in Gene Function and Expression Engineering University of Massachusetts Medical School University of California, Santa Cruz Lazare Research Building, Room 519 Engineering II Building, Suite 501 364 Plantation Street Mail Stop CBSE/ITI Worcester, MA 01541 1156 High Street (508) 856-4371 Santa Cruz, CA 95064 [email protected] (831) 459-4937 [email protected] Mark Diekhans Research Staff Member Ian Dunham Center for Biomolecular Science and Ensembl Developer Engineering European Molecular Biology Laboratory University of California, Santa Cruz European Bioinformatics Institute Engineering II Building, Suite 501 Welcome Trust Genome Campus Mail Stop CBSE/ITI Hinxton, Cambridge CB10 1SD 1156 High Street United Kingdom Santa Cruz, CA 95064 +44-(0)1223-494 444 (831) 459-1418 +44-(0)1223-494 468 Fax [email protected] [email protected] - 2 - Laura Elnitski, Ph.D. Paul Flicek, D.Sc. Investigator and Head Team Leader Genomic Functional Analysis Section Vertebrate Genomics Genome Technology Branch European Molecular Biology Laboratory National Human Genome Research Institute European Bioinformatics Institute National Institutes of Health Hinxton Outstation Room 5N-01R Wellcome Trust Genome Campus MSC 9400 Hinxton, Cambridge CB10 1SD 5625 Fishers Lane United Kingdom Bethesda, MD 20892-9400 +44-(0)1223-494 444 (301) 451-0265 +44-(0)1223-494 468 Fax [email protected] [email protected] Ghia Marie Euskirchen, Ph.D. Seth Eric Frietze, Ph.D. Associate Research Scientist University of California, Davis Department of Molecular, Cellular and 1509 Oak Avenue Developmental Biology Davis, CA 95616 Yale University (617) 331-7324 Kline Biology Tower, Room 918 [email protected] 266 Whitney Avenue New Haven, CT 06511 Melissa Jane Fullwood (203) 432-3510 Genome Institute of Singapore (203) 432-6161 Fax Agency for Science Technology and Research [email protected] Room 02-01 60 Biopolis Street Peggy Farnham, Ph.D. Singapore 138672 Associate Director of Genomics Singapore Genome Center and Department of (65) 64788097 Pharmacology (65) 64789059 Fax University of California, Davis [email protected] Room 4512 1 Shields Avenue Terry Furey, Ph.D. Davis, CA 95616 Duke Institute for Genome Sciences & Policy (530) 754-4988 Duke University [email protected] 101 Science Drive P.O. Box 3382 Elise Feingold, Ph.D. Durham, NC 27708 Program Director, Genome Analysis (919) 668-4728 National Human Genome Research Institute [email protected] National Institutes of Health Suite 4076 Mark Gerstein, Ph.D. MSC 9305 Professor of Computational Biology and 5635 Fishers Lane Bioinformatics Bethesda, MD 20892-9305 Department of Molecular Biophysics and (301) 496-7531 Biochemistry (301) 480-2770 Fax Department of Computer Science [email protected] Yale University Bass Building, Room 432A Katalin Fejes-Toth, Ph.D. 266 Whitney Avenue Postdoctoral Fellow New Haven, CT 06511 Cold Spring Harbor Laboratory (203) 432-6105 1 Bungtown Road [email protected] Cold Spring Harbor, NY 11756 (516) 367-5042 (516) 367-8874 Fax [email protected] - 3 - Thomas Raymond Gingeras, Ph.D. Eric Green, M.D., Ph.D. Principal Investigator Scientific Director Encode Grant U54 Division of Intramural Research Affymetrix, Inc. Chief 3380 Central Expressway Genome Technology Branch Santa Clara, CA 95051 Director (408) 731-5175 NIH Intramural Sequencing Center (408) 732-7025 Fax National Human Genome Research Institute [email protected] National Institutes of Health Room 5222 Paul Giresi MSC 8002 Graduate Student 50 South Drive Department of Biology Bethesda, MD 20892-8002 The University of North Carolina at Chapel Hill (301) 402-2023 Fordham Hall, Room 407 (301) 480-2634 Fax Campus Box 3280 [email protected] Chapel Hill, NC 27599-3280 (919) 843-3229 Roderic Guigo, Ph.D. [email protected] Coordinator Bioinformatics and Genomics Programme Peter Good, Ph.D. Center for Genomic Regulation Program Director Professor Division of Extramural Research University Pompeu Fabra National Human Genome Research Institute Doctor Aiguader 88 National Institutes of Health Barcelona 8003 MSC 9305 Spain 5635 Fishers Lane +34 933160110 Bethesda, MD 20892-9305 [email protected] (301) 496-7531 [email protected] Mark S. Guyer, Ph.D. Director John M. Greally, M.D., Ph.D. Division of Extramural Research Director National Human Genome Research Institute Einstein Center for Epigenomics National Institutes of Health Albert Einstein College of Medicine Suite 4076 Ullmann Building, Room 911 MSC 9305 1300 Morris Park Avenue 5635 Fishers Lane Bronx, NY 10461 Bethesda, MD 20892-9305 (718) 430-2875 (301) 496-7531 (718) 430-8855 Fax (301) 480-2770 Fax [email protected] [email protected] Gregory Hannon, Ph.D. Professor Watson School of Biological Sciences Investigator Howard Hughes Medical Institute Cold Spring Harbor Laboratory 1 Bungtown Road Cold Spring Harbor, NY 11724 (516) 367-8889 (516) 367-8874 Fax [email protected] - 4 - Ross C. Hardison, Ph.D. Vishy Iyer, Ph.D. T. Ming Chu Professor of Biochemistry Associate Professor Department of Biochemistry and Molecular Center for Systems and Synthetic Biology Biology The University of Texas at Austin Center for Comparative Genomics and Molecular Biology Building, Room 3.212AA Bioinformatics 1 University Station A4800 Pennsylvania State University Austin, TX 78712 Wartik Laboratory, Room 304 (512) 232-7833 University Park, PA 16802 [email protected] (814) 863-0113 (814) 863-7024 Fax Edwin Jacox, Ph.D. [email protected] Genomic Functional Analysis Section Genome Technology Branch Jennifer Harrow National Human Genome Research Institute HAVANA Group Leader National Institutes of Health Informatics Department Room 5N-01 Wellcome Trust Sanger Institute 5625 Fishers Lane Genome Campus Bethesda, MD 20892 Hinxton, Cambridge CB10 1SA (301) 451-0268 United Kingdom [email protected] +44-(0)1223-496 830 +44-(0)1223-496 802 Fax Manolis Kellis, Ph.D. [email protected] Associate Professor of Computer Science Broad Institute of MIT and Harvard Rachel Harte, Ph.D., M.S. Room 32G-826 Bioinformatics Engineer 32 Vassar Street Center for Biomolecular Science and Cambridge, MA 02139 Engineering (617) 253-2419 University of California, Santa Cruz (617)
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