Lasallia Pustulata
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Umbilicariaceae Phylogeny TAXON 66 (6) • December 2017: 1282–1303
Davydov & al. • Umbilicariaceae phylogeny TAXON 66 (6) • December 2017: 1282–1303 Umbilicariaceae (lichenized Ascomycota) – Trait evolution and a new generic concept Evgeny A. Davydov,1 Derek Peršoh2 & Gerhard Rambold3 1 Altai State University, Lenin Ave. 61, Barnaul, 656049 Russia 2 Ruhr-Universität Bochum, AG Geobotanik, Gebäude ND 03/170, Universitätsstraße 150, 44801 Bochum, Germany 3 University of Bayreuth, Plant Systematics, Mycology Dept., Universitätsstraße 30, NW I, 95445 Bayreuth, Germany Author for correspondence: Evgeny A. Davydov, [email protected] ORCID EAD, http://orcid.org/0000-0002-2316-8506; DP, http://orcid.org/0000-0001-5561-0189 DOI https://doi.org/10.12705/666.2 Abstract To reconstruct hypotheses on the evolution of Umbilicariaceae, 644 sequences from three independent DNA regions were used, 433 of which were newly produced. The study includes a representative fraction (presumably about 80%) of the known species diversity of the Umbilicariaceae s.str. and is based on the phylograms obtained using maximum likelihood and a Bayesian phylogenetic inference framework. The analyses resulted in the recognition of eight well-supported clades, delimited by a combination of morphological and chemical features. None of the previous classifications within Umbilicariaceae s.str. were supported by the phylogenetic analyses. The distribution of the diagnostic morphological and chemical traits against the molecular phylogenetic topology revealed the following patterns of evolution: (1) Rhizinomorphs were gained at least four times independently and are lacking in most clades grouping in the proximity of Lasallia. (2) Asexual reproductive structures, i.e., thalloconidia and lichenized dispersal units, appear more or less mutually exclusive, being restricted to different clades. -
1 Recurrent Loss of Abaa, a Master Regulator of Asexual Development in Filamentous Fungi
bioRxiv preprint doi: https://doi.org/10.1101/829465; this version posted November 4, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. 1 Recurrent loss of abaA, a master regulator of asexual development in filamentous fungi, 2 correlates with changes in genomic and morphological traits 3 4 Matthew E. Meada,*, Alexander T. Borowskya,b,*, Bastian Joehnkc, Jacob L. Steenwyka, Xing- 5 Xing Shena, Anita Silc, and Antonis Rokasa,# 6 7 aDepartment of Biological Sciences, Vanderbilt University, Nashville, Tennessee, USA 8 bCurrent Address: Department of Botany and Plant Sciences, University of California Riverside, 9 Riverside, California, USA 10 cDepartment of Microbiology and Immunology, University of California San Francisco, San 11 Francisco, California, USA 12 13 Short Title: Recurrent loss of abaA across Eurotiomycetes 14 #Address correspondence to Antonis Rokas, [email protected] 15 16 *These authors contributed equally to this work 17 18 19 Keywords: Fungal asexual development, abaA, evolution, developmental evolution, 20 morphology, binding site, Histoplasma capsulatum, regulatory rewiring, gene regulatory 21 network, evo-devo 22 1 bioRxiv preprint doi: https://doi.org/10.1101/829465; this version posted November 4, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. 23 Abstract 24 Gene regulatory networks (GRNs) drive developmental and cellular differentiation, and variation 25 in their architectures gives rise to morphological diversity. -
One Hundred New Species of Lichenized Fungi: a Signature of Undiscovered Global Diversity
Phytotaxa 18: 1–127 (2011) ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ Monograph PHYTOTAXA Copyright © 2011 Magnolia Press ISSN 1179-3163 (online edition) PHYTOTAXA 18 One hundred new species of lichenized fungi: a signature of undiscovered global diversity H. THORSTEN LUMBSCH1*, TEUVO AHTI2, SUSANNE ALTERMANN3, GUILLERMO AMO DE PAZ4, ANDRÉ APTROOT5, ULF ARUP6, ALEJANDRINA BÁRCENAS PEÑA7, PAULINA A. BAWINGAN8, MICHEL N. BENATTI9, LUISA BETANCOURT10, CURTIS R. BJÖRK11, KANSRI BOONPRAGOB12, MAARTEN BRAND13, FRANK BUNGARTZ14, MARCELA E. S. CÁCERES15, MEHTMET CANDAN16, JOSÉ LUIS CHAVES17, PHILIPPE CLERC18, RALPH COMMON19, BRIAN J. COPPINS20, ANA CRESPO4, MANUELA DAL-FORNO21, PRADEEP K. DIVAKAR4, MELIZAR V. DUYA22, JOHN A. ELIX23, ARVE ELVEBAKK24, JOHNATHON D. FANKHAUSER25, EDIT FARKAS26, LIDIA ITATÍ FERRARO27, EBERHARD FISCHER28, DAVID J. GALLOWAY29, ESTER GAYA30, MIREIA GIRALT31, TREVOR GOWARD32, MARTIN GRUBE33, JOSEF HAFELLNER33, JESÚS E. HERNÁNDEZ M.34, MARÍA DE LOS ANGELES HERRERA CAMPOS7, KLAUS KALB35, INGVAR KÄRNEFELT6, GINTARAS KANTVILAS36, DOROTHEE KILLMANN28, PAUL KIRIKA37, KERRY KNUDSEN38, HARALD KOMPOSCH39, SERGEY KONDRATYUK40, JAMES D. LAWREY21, ARMIN MANGOLD41, MARCELO P. MARCELLI9, BRUCE MCCUNE42, MARIA INES MESSUTI43, ANDREA MICHLIG27, RICARDO MIRANDA GONZÁLEZ7, BIBIANA MONCADA10, ALIFERETI NAIKATINI44, MATTHEW P. NELSEN1, 45, DAG O. ØVSTEDAL46, ZDENEK PALICE47, KHWANRUAN PAPONG48, SITTIPORN PARNMEN12, SERGIO PÉREZ-ORTEGA4, CHRISTIAN PRINTZEN49, VÍCTOR J. RICO4, EIMY RIVAS PLATA1, 50, JAVIER ROBAYO51, DANIA ROSABAL52, ULRIKE RUPRECHT53, NORIS SALAZAR ALLEN54, LEOPOLDO SANCHO4, LUCIANA SANTOS DE JESUS15, TAMIRES SANTOS VIEIRA15, MATTHIAS SCHULTZ55, MARK R. D. SEAWARD56, EMMANUËL SÉRUSIAUX57, IMKE SCHMITT58, HARRIE J. M. SIPMAN59, MOHAMMAD SOHRABI 2, 60, ULRIK SØCHTING61, MAJBRIT ZEUTHEN SØGAARD61, LAURENS B. SPARRIUS62, ADRIANO SPIELMANN63, TOBY SPRIBILLE33, JUTARAT SUTJARITTURAKAN64, ACHRA THAMMATHAWORN65, ARNE THELL6, GÖRAN THOR66, HOLGER THÜS67, EINAR TIMDAL68, CAMILLE TRUONG18, ROMAN TÜRK69, LOENGRIN UMAÑA TENORIO17, DALIP K. -
Lichens and Associated Fungi from Glacier Bay National Park, Alaska
The Lichenologist (2020), 52,61–181 doi:10.1017/S0024282920000079 Standard Paper Lichens and associated fungi from Glacier Bay National Park, Alaska Toby Spribille1,2,3 , Alan M. Fryday4 , Sergio Pérez-Ortega5 , Måns Svensson6, Tor Tønsberg7, Stefan Ekman6 , Håkon Holien8,9, Philipp Resl10 , Kevin Schneider11, Edith Stabentheiner2, Holger Thüs12,13 , Jan Vondrák14,15 and Lewis Sharman16 1Department of Biological Sciences, CW405, University of Alberta, Edmonton, Alberta T6G 2R3, Canada; 2Department of Plant Sciences, Institute of Biology, University of Graz, NAWI Graz, Holteigasse 6, 8010 Graz, Austria; 3Division of Biological Sciences, University of Montana, 32 Campus Drive, Missoula, Montana 59812, USA; 4Herbarium, Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824, USA; 5Real Jardín Botánico (CSIC), Departamento de Micología, Calle Claudio Moyano 1, E-28014 Madrid, Spain; 6Museum of Evolution, Uppsala University, Norbyvägen 16, SE-75236 Uppsala, Sweden; 7Department of Natural History, University Museum of Bergen Allégt. 41, P.O. Box 7800, N-5020 Bergen, Norway; 8Faculty of Bioscience and Aquaculture, Nord University, Box 2501, NO-7729 Steinkjer, Norway; 9NTNU University Museum, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway; 10Faculty of Biology, Department I, Systematic Botany and Mycology, University of Munich (LMU), Menzinger Straße 67, 80638 München, Germany; 11Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK; 12Botany Department, State Museum of Natural History Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany; 13Natural History Museum, Cromwell Road, London SW7 5BD, UK; 14Institute of Botany of the Czech Academy of Sciences, Zámek 1, 252 43 Průhonice, Czech Republic; 15Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 1760, CZ-370 05 České Budějovice, Czech Republic and 16Glacier Bay National Park & Preserve, P.O. -
<I> Lecanoromycetes</I> of Lichenicolous Fungi Associated With
Persoonia 39, 2017: 91–117 ISSN (Online) 1878-9080 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE https://doi.org/10.3767/persoonia.2017.39.05 Phylogenetic placement within Lecanoromycetes of lichenicolous fungi associated with Cladonia and some other genera R. Pino-Bodas1,2, M.P. Zhurbenko3, S. Stenroos1 Key words Abstract Though most of the lichenicolous fungi belong to the Ascomycetes, their phylogenetic placement based on molecular data is lacking for numerous species. In this study the phylogenetic placement of 19 species of cladoniicolous species lichenicolous fungi was determined using four loci (LSU rDNA, SSU rDNA, ITS rDNA and mtSSU). The phylogenetic Pilocarpaceae analyses revealed that the studied lichenicolous fungi are widespread across the phylogeny of Lecanoromycetes. Protothelenellaceae One species is placed in Acarosporales, Sarcogyne sphaerospora; five species in Dactylosporaceae, Dactylo Scutula cladoniicola spora ahtii, D. deminuta, D. glaucoides, D. parasitica and Dactylospora sp.; four species belong to Lecanorales, Stictidaceae Lichenosticta alcicorniaria, Epicladonia simplex, E. stenospora and Scutula epiblastematica. The genus Epicladonia Stictis cladoniae is polyphyletic and the type E. sandstedei belongs to Leotiomycetes. Phaeopyxis punctum and Bachmanniomyces uncialicola form a well supported clade in the Ostropomycetidae. Epigloea soleiformis is related to Arthrorhaphis and Anzina. Four species are placed in Ostropales, Corticifraga peltigerae, Cryptodiscus epicladonia, C. galaninae and C. cladoniicola -
A Multigene Phylogenetic Synthesis for the Class Lecanoromycetes (Ascomycota): 1307 Fungi Representing 1139 Infrageneric Taxa, 317 Genera and 66 Families
A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families Miadlikowska, J., Kauff, F., Högnabba, F., Oliver, J. C., Molnár, K., Fraker, E., ... & Stenroos, S. (2014). A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families. Molecular Phylogenetics and Evolution, 79, 132-168. doi:10.1016/j.ympev.2014.04.003 10.1016/j.ympev.2014.04.003 Elsevier Version of Record http://cdss.library.oregonstate.edu/sa-termsofuse Molecular Phylogenetics and Evolution 79 (2014) 132–168 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families ⇑ Jolanta Miadlikowska a, , Frank Kauff b,1, Filip Högnabba c, Jeffrey C. Oliver d,2, Katalin Molnár a,3, Emily Fraker a,4, Ester Gaya a,5, Josef Hafellner e, Valérie Hofstetter a,6, Cécile Gueidan a,7, Mónica A.G. Otálora a,8, Brendan Hodkinson a,9, Martin Kukwa f, Robert Lücking g, Curtis Björk h, Harrie J.M. Sipman i, Ana Rosa Burgaz j, Arne Thell k, Alfredo Passo l, Leena Myllys c, Trevor Goward h, Samantha Fernández-Brime m, Geir Hestmark n, James Lendemer o, H. Thorsten Lumbsch g, Michaela Schmull p, Conrad L. Schoch q, Emmanuël Sérusiaux r, David R. Maddison s, A. Elizabeth Arnold t, François Lutzoni a,10, -
Introduction to the Southern Blue Ridge Ecoregional Conservation Plan
SOUTHERN BLUE RIDGE ECOREGIONAL CONSERVATION PLAN Summary and Implementation Document March 2000 THE NATURE CONSERVANCY and the SOUTHERN APPALACHIAN FOREST COALITION Southern Blue Ridge Ecoregional Conservation Plan Summary and Implementation Document Citation: The Nature Conservancy and Southern Appalachian Forest Coalition. 2000. Southern Blue Ridge Ecoregional Conservation Plan: Summary and Implementation Document. The Nature Conservancy: Durham, North Carolina. This document was produced in partnership by the following three conservation organizations: The Nature Conservancy is a nonprofit conservation organization with the mission to preserve plants, animals and natural communities that represent the diversity of life on Earth by protecting the lands and waters they need to survive. The Southern Appalachian Forest Coalition is a nonprofit organization that works to preserve, protect, and pass on the irreplaceable heritage of the region’s National Forests and mountain landscapes. The Association for Biodiversity Information is an organization dedicated to providing information for protecting the diversity of life on Earth. ABI is an independent nonprofit organization created in collaboration with the Network of Natural Heritage Programs and Conservation Data Centers and The Nature Conservancy, and is a leading source of reliable information on species and ecosystems for use in conservation and land use planning. Photocredits: Robert D. Sutter, The Nature Conservancy EXECUTIVE SUMMARY This first iteration of an ecoregional plan for the Southern Blue Ridge is a compendium of hypotheses on how to conserve species nearest extinction, rare and common natural communities and the rich and diverse biodiversity in the ecoregion. The plan identifies a portfolio of sites that is a vision for conservation action, enabling practitioners to set priorities among sites and develop site-specific and multi-site conservation strategies. -
Photobiont Associations in Co-Occurring Umbilicate Lichens with Contrasting Modes of Reproduction in Coastal Norway
The Lichenologist 48(5): 545–557 (2016) © British Lichen Society, 2016 doi:10.1017/S0024282916000232 Photobiont associations in co-occurring umbilicate lichens with contrasting modes of reproduction in coastal Norway Geir HESTMARK, François LUTZONI and Jolanta MIADLIKOWSKA Abstract: The identity and phylogenetic placement of photobionts associated with two lichen-forming fungi, Umbilicaria spodochroa and Lasallia pustulata were examined. These lichens commonly grow together in high abundance on coastal cliffs in Norway, Sweden and Finland. The mycobiont of U. spodochroa reproduces sexually through ascospores, and must find a suitable algal partner in the environment to re-establish the lichen symbiosis. Lasallia pustulata reproduces mainly vegetatively using symbiotic propagules (isidia) containing both symbiotic partners (photobiont and mycobiont). Based on DNA sequences of the internal transcribed spacer region (ITS) we detected seven haplotypes of the green-algal genus Trebouxia in 19 pairs of adjacent thalli of U. spodochroa and L. pustulata from five coastal localities in Norway. As expected, U. spodochroa associated with a higher diversity of photobionts (seven haplotypes) than the mostly asexually reproducing L. pustulata (four haplotypes). The latter was associated with the same haplotype in 15 of the 19 thalli sampled. Nine of the lichen pairs examined share the same algal haplotype, supporting the hypothesis that the mycobiont of U. spodochroa might associate with the photobiont ‘pirated’ from the abundant isidia produced by L. pustulata that are often scattered on the cliff surfaces. Up to six haplotypes of Trebouxia were found within a single sampling site, indicating a low level of specificity of both mycobionts for their algal partner. Most photobiont strains associated with species of Umbilicaria and Lasallia, including samples from this study, represent phylogenetically closely related taxa of Trebouxia grouped within a small number of main clades (Trebouxia sp., T. -
A Higher-Level Phylogenetic Classification of the Fungi
mycological research 111 (2007) 509–547 available at www.sciencedirect.com journal homepage: www.elsevier.com/locate/mycres A higher-level phylogenetic classification of the Fungi David S. HIBBETTa,*, Manfred BINDERa, Joseph F. BISCHOFFb, Meredith BLACKWELLc, Paul F. CANNONd, Ove E. ERIKSSONe, Sabine HUHNDORFf, Timothy JAMESg, Paul M. KIRKd, Robert LU¨ CKINGf, H. THORSTEN LUMBSCHf, Franc¸ois LUTZONIg, P. Brandon MATHENYa, David J. MCLAUGHLINh, Martha J. POWELLi, Scott REDHEAD j, Conrad L. SCHOCHk, Joseph W. SPATAFORAk, Joost A. STALPERSl, Rytas VILGALYSg, M. Catherine AIMEm, Andre´ APTROOTn, Robert BAUERo, Dominik BEGEROWp, Gerald L. BENNYq, Lisa A. CASTLEBURYm, Pedro W. CROUSl, Yu-Cheng DAIr, Walter GAMSl, David M. GEISERs, Gareth W. GRIFFITHt,Ce´cile GUEIDANg, David L. HAWKSWORTHu, Geir HESTMARKv, Kentaro HOSAKAw, Richard A. HUMBERx, Kevin D. HYDEy, Joseph E. IRONSIDEt, Urmas KO˜ LJALGz, Cletus P. KURTZMANaa, Karl-Henrik LARSSONab, Robert LICHTWARDTac, Joyce LONGCOREad, Jolanta MIA˛ DLIKOWSKAg, Andrew MILLERae, Jean-Marc MONCALVOaf, Sharon MOZLEY-STANDRIDGEag, Franz OBERWINKLERo, Erast PARMASTOah, Vale´rie REEBg, Jack D. ROGERSai, Claude ROUXaj, Leif RYVARDENak, Jose´ Paulo SAMPAIOal, Arthur SCHU¨ ßLERam, Junta SUGIYAMAan, R. Greg THORNao, Leif TIBELLap, Wendy A. UNTEREINERaq, Christopher WALKERar, Zheng WANGa, Alex WEIRas, Michael WEISSo, Merlin M. WHITEat, Katarina WINKAe, Yi-Jian YAOau, Ning ZHANGav aBiology Department, Clark University, Worcester, MA 01610, USA bNational Library of Medicine, National Center for Biotechnology Information, -
Vegetation Classification and Mapping Project Report
U.S. Geological Survey-National Park Service Vegetation Mapping Program Acadia National Park, Maine Project Report Revised Edition – October 2003 Mention of trade names or commercial products does not constitute endorsement or recommendation for use by the U. S. Department of the Interior, U. S. Geological Survey. USGS-NPS Vegetation Mapping Program Acadia National Park U.S. Geological Survey-National Park Service Vegetation Mapping Program Acadia National Park, Maine Sara Lubinski and Kevin Hop U.S. Geological Survey Upper Midwest Environmental Sciences Center and Susan Gawler Maine Natural Areas Program This report produced by U.S. Department of the Interior U.S. Geological Survey Upper Midwest Environmental Sciences Center 2630 Fanta Reed Road La Crosse, Wisconsin 54603 and Maine Natural Areas Program Department of Conservation 159 Hospital Street 93 State House Station Augusta, Maine 04333-0093 In conjunction with Mike Story (NPS Vegetation Mapping Coordinator) NPS, Natural Resources Information Division, Inventory and Monitoring Program Karl Brown (USGS Vegetation Mapping Coordinator) USGS, Center for Biological Informatics and Revised Edition - October 2003 USGS-NPS Vegetation Mapping Program Acadia National Park Contacts U.S. Department of Interior United States Geological Survey - Biological Resources Division Website: http://www.usgs.gov U.S. Geological Survey Center for Biological Informatics P.O. Box 25046 Building 810, Room 8000, MS-302 Denver Federal Center Denver, Colorado 80225-0046 Website: http://biology.usgs.gov/cbi Karl Brown USGS Program Coordinator - USGS-NPS Vegetation Mapping Program Phone: (303) 202-4240 E-mail: [email protected] Susan Stitt USGS Remote Sensing and Geospatial Technologies Specialist USGS-NPS Vegetation Mapping Program Phone: (303) 202-4234 E-mail: [email protected] Kevin Hop Principal Investigator U.S. -
Secondary Metabolites from Cetrarioid Lichens: Chemotaxonomy, Biological Activities and Pharmaceutical Potential
Phytomedicine 23 (2016) 441–459 Contents lists available at ScienceDirect Phytomedicine journal homepage: www.elsevier.com/locate/phymed Secondary metabolites from cetrarioid lichens: Chemotaxonomy, biological activities and pharmaceutical potential Maonian Xu a, Starri Heidmarsson b, Elin Soffia Olafsdottir a, Rosa Buonfiglio c, ∗ Thierry Kogej c, Sesselja Omarsdottir a, a Faculty of Pharmaceutical Sciences, University of Iceland, Hagi, Hofsvallagata 53, IS-107 Reykjavik, Iceland b Icelandic Institute of Natural History, Akureyri Division, IS-600 Akureyri, Iceland c Chemistry Innovation Centre, Discovery Sciences, AstraZeneca R&D Mölndal, Pepparedsleden 1, Mölndal SE-43183, Sweden a r t i c l e i n f o a b s t r a c t Article history: Background: Lichens, as a symbiotic association of photobionts and mycobionts, display an unmatched Received 11 November 2015 environmental adaptability and a great chemical diversity. As an important morphological group, cetrari- Revised 16 February 2016 oid lichens are one of the most studied lichen taxa for their phylogeny, secondary chemistry, bioactivities Accepted 17 February 2016 and uses in folk medicines, especially the lichen Cetraria islandica . However, insufficient structure eluci- dation and discrepancy in bioactivity results could be found in a few studies. Keywords: Purpose: This review aimed to present a more detailed and updated overview of the knowledge of sec- Cetrarioid lichens ondary metabolites from cetrarioid lichens in a critical manner, highlighting their potentials for phar- Chemotaxonomy maceuticals as well as other applications. Here we also highlight the uses of molecular phylogenetics, Ethnopharmacology metabolomics and ChemGPS-NP model for future bioprospecting, taxonomy and drug screening to accel- Lichen substances erate applications of those lichen substances. -
Genome-Wide Analyses of Biosynthetic Genes in Lichen
Genome-wide analyses of biosynthetic genes in lichen - forming fungi Dissertation zu Erlangung des Doktorgrades der Naturwissenschaften vorgelegt beim Fachbereich Biowissenschaften der Johann Wolfgang Goethe - Universität in Frankfurt am Main von Anjuli Calchera aus Frankfurt am Main Frankfurt (2019) (D 30) vom Fachbereich Biowissenschaften der Johann Wolfgang Goethe - Universität als Dissertation angenommen. Dekan: Prof. Dr. Sven Klimpel Institut für Ökologie, Evolution und Diversität Johann Wolfgang Goethe - Universität D-60438 Frankfurt am Main Gutachter: Prof. Dr. Imke Schmitt Institut für Ökologie, Evolution und Diversität Johann Wolfgang Goethe - Universität D-60438 Frankfurt am Main Prof. Dr. Markus Pfenninger Institut für Organismische und Molekulare Evolutionsbiologie Johannes Gutenberg - Universität Mainz D-55128 Mainz Datum der Disputation: 24.06.2020 This thesis is based on the following publications: Meiser,Meiser, A. A., Otte, J., Schmitt, I., & Dal Grande, F. (2017). Sequencing genomes from mixed DNA samples - evaluating the metagenome skimming approach in lichenized fungi. Scientific Reports, 7(1), 14881, doi:10.1038/s41598-017-14576-6. Dal Grande, F., Meiser,Meiser, A. A., Greshake Tzovaras, B., Otte, J., Ebersberger, I., & Schmitt, I. (2018a). The draft genome of the lichen-forming fungus Lasallia hispanica (Frey) Sancho & A. Crespo. The Lichenologist, 50(3), 329–340, doi:10.1017/S002428291800021X. Calchera,Calchera, A. A., Dal Grande, F., Bode, H. B., & Schmitt, I. (2019). Biosynthetic gene content of the ’perfume lichens’ Evernia prunastri and Pseudevernia furfuracea. Molecules, 24(1), 203, doi:10.3390/molecules24010203. VII Contents 1. Abstract ......................................... 1 2. Introduction ....................................... 4 2.1. Natural products from fungi..........................4 2.2. Natural products from lichens.........................5 2.3. Lichen genomics..................................7 2.4.