Gymnosperms-Brief-Introduction
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Fossils and Plant Phylogeny1
American Journal of Botany 91(10): 1683±1699. 2004. FOSSILS AND PLANT PHYLOGENY1 PETER R. CRANE,2,5 PATRICK HERENDEEN,3 AND ELSE MARIE FRIIS4 2Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, UK; 3Department of Biological Sciences, The George Washington University, Washington DC 20052 USA; 4Department of Palaeobotany, Swedish Museum of Natural History, Box 50007, S-104 05 Stockholm, Sweden Developing a detailed estimate of plant phylogeny is the key ®rst step toward a more sophisticated and particularized understanding of plant evolution. At many levels in the hierarchy of plant life, it will be impossible to develop an adequate understanding of plant phylogeny without taking into account the additional diversity provided by fossil plants. This is especially the case for relatively deep divergences among extant lineages that have a long evolutionary history and in which much of the relevant diversity has been lost by extinction. In such circumstances, attempts to integrate data and interpretations from extant and fossil plants stand the best chance of success. For this to be possible, what will be required is meticulous and thorough descriptions of fossil material, thoughtful and rigorous analysis of characters, and careful comparison of extant and fossil taxa, as a basis for determining their systematic relationships. Key words: angiosperms; fossils; paleobotany; phylogeny; spermatophytes; tracheophytes. Most biological processes, such as reproduction or growth distic context, neither fossils nor their stratigraphic position and development, can only be studied directly or manipulated have any special role in inferring phylogeny, and although experimentally using living organisms. Nevertheless, much of more complex models have been developed (see Fisher, 1994; what we have inferred about the large-scale processes of plant Huelsenbeck, 1994), these have not been widely adopted. -
The Jurassic Fossil Wood Diversity from Western Liaoning, NE China
Jiang et al. Journal of Palaeogeography (2019) 8:1 https://doi.org/10.1186/s42501-018-0018-y Journal of Palaeogeography RESEARCH Open Access The Jurassic fossil wood diversity from western Liaoning, NE China Zi-Kun Jiang1,2, Yong-Dong Wang2,3*, Ning Tian4,5, Ao-Wei Xie2,6, Wu Zhang7, Li-Qin Li2 and Min Huang1 Abstract Western Liaoning is a unique region in China that bears diverse types of Jurassic plants, including leaves, fern rhizomes, and wood, providing significant proxy for vegetation and palaeoenvironment reconstruction of the well-known Yanliao Flora in East Asia. In particular, the silicified wood is very abundant in the fossil Lagerstätte of the Jurassic Tiaojishan Formation in Beipiao, western Liaoning. Previous and recent systematic investigations documented a high diversity of the Jurassic wood assemblages. These assemblages are dominated by conifers, followed by cycads and ginkgoaleans. In total, about 30 species belonging to 21 genera of fossil wood have been recorded so far, which are represented by Cycadopsida, Ginkgopsida, Coniferopsida, and Gymnospermae incertae sedis. The evolutionary implications of several distinctive fossil wood taxa as well as palaeoclimate implications are summarized based on their anatomical structures and growth ring patterns. This work approaches the vegetation development and evolutionary significances of the wood taxa and their relatives, and provides clues for the further understanding of the diversity of the Jurassic Yanliao Flora in East Asia. Keywords: Fossil wood, Diversity, Evolution, Tiaojishan Formation, Jurassic 1 Introduction 2004;Wangetal.,2009). Among these localities, western Fossil floras are a significant record for the vegetation Liaoning is a well-known fossil Lagerstätte with diverse and for the palaeoenvironment reconstructions of the and well-preserved fossil plant foliages and wood (Zhang Mesozoic. -
Chromosome Numbers in Gymnosperms - an Update
Rastogi and Ohri . Silvae Genetica (2020) 69, 13 - 19 13 Chromosome Numbers in Gymnosperms - An Update Shubhi Rastogi and Deepak Ohri Amity Institute of Biotechnology, Research Cell, Amity University Uttar Pradesh, Lucknow Campus, Malhaur (Near Railway Station), P.O. Chinhat, Luc know-226028 (U.P.) * Corresponding author: Deepak Ohri, E mail: [email protected], [email protected] Abstract still some controversy with regard to a monophyletic or para- phyletic origin of the gymnosperms (Hill 2005). Recently they The present report is based on a cytological data base on 614 have been classified into four subclasses Cycadidae, Ginkgoi- (56.0 %) of the total 1104 recognized species and 82 (90.0 %) of dae, Gnetidae and Pinidae under the class Equisetopsida the 88 recognized genera of gymnosperms. Family Cycada- (Chase and Reveal 2009) comprising 12 families and 83 genera ceae and many genera of Zamiaceae show intrageneric unifor- (Christenhusz et al. 2011) and 88 genera with 1104 recognized mity of somatic numbers, the genus Zamia is represented by a species according to the Plant List (www.theplantlist.org). The range of number from 2n=16-28. Ginkgo, Welwitschia and Gen- validity of accepted name of each taxa and the total number of tum show 2n=24, 2n=42, and 2n=44 respectively. Ephedra species in each genus has been checked from the Plant List shows a range of polyploidy from 2x-8x based on n=7. The (www.theplantlist.org). The chromosome numbers of 688 taxa family Pinaceae as a whole shows 2n=24except for Pseudolarix arranged according to the recent classification (Christenhusz and Pseudotsuga with 2n=44 and 2n=26 respectively. -
New Paleobotanical Data on the Portuguese Pennsylvanian (Douro Carboniferous Basin, NW Portugal)
Versão online: http://www.lneg.pt/iedt/unidades/16/paginas/26/30/185 Comunicações Geológicas (2014) 101, Especial I, 409-414 IX CNG/2º CoGePLiP, Porto 2014 ISSN: 0873-948X; e-ISSN: 1647-581X New paleobotanical data on the Portuguese Pennsylvanian (Douro Carboniferous Basin, NW Portugal) Novos dados paleobotânicos do Pensilvaniano português (Bacia Carbonífera do Douro, NW Portugal) P. Correia1*, Z. Šimůnek2, J. Pšenička3, A. A. Sá4,5, R. Domingos6, A. Carneiro7, D. Flores1,7 Artigo Curto Short Article © 2014 LNEG – Laboratório Nacional de Geologia e Energia IP Abstract: This paper describes nine new macrofloral taxa from 1. Introduction Douro Carboniferous Basin (lower Gzhelian) of Portugal. The plant assemblage is mainly composed by pteridophylls (Sphenopteriss The fossil flora of Carboniferous of Portugal is still little arberi Kidston, Sphenopteris fayoli Zeiller, Sphenopteris tenuis known. The new megafloral occurrences recently found in Schenk, Odontopteris schlotheimii Brongniart), sphenopsids the Upper Pennsylvanian strata of Douro Carboniferous (Annularia spicata Gutbier, Stellotheca robusta (Feistmantel) Basin (DCB) provide new and important data about Surange and Prakash, Calamostachys grandis Zeiller (Jongmans) and Calamostachys calathifera Sterzel) besides the gymnosperm paleobotanical richness and diversity of the Paleozoic Cordaites foliolatus Grand`Eury. The new data provide a better floras of Portugal offering more information to previous understating of the knowledge of Late Carboniferous floras of researches reported from diverse localities and by different Portugal, showing the high plant diversity of Gzhelian floras, when authors (e.g. Wenceslau de Lima, Bernardino António considerable changes in paleogeography and climate dynamics are Gomes, Carlos Ribeiro, Carríngton da Costa, Carlos evidenced in Euramerican floristic assemblages. -
Plant Evolution an Introduction to the History of Life
Plant Evolution An Introduction to the History of Life KARL J. NIKLAS The University of Chicago Press Chicago and London CONTENTS Preface vii Introduction 1 1 Origins and Early Events 29 2 The Invasion of Land and Air 93 3 Population Genetics, Adaptation, and Evolution 153 4 Development and Evolution 217 5 Speciation and Microevolution 271 6 Macroevolution 325 7 The Evolution of Multicellularity 377 8 Biophysics and Evolution 431 9 Ecology and Evolution 483 Glossary 537 Index 547 v Introduction The unpredictable and the predetermined unfold together to make everything the way it is. It’s how nature creates itself, on every scale, the snowflake and the snowstorm. — TOM STOPPARD, Arcadia, Act 1, Scene 4 (1993) Much has been written about evolution from the perspective of the history and biology of animals, but significantly less has been writ- ten about the evolutionary biology of plants. Zoocentricism in the biological literature is understandable to some extent because we are after all animals and not plants and because our self- interest is not entirely egotistical, since no biologist can deny the fact that animals have played significant and important roles as the actors on the stage of evolution come and go. The nearly romantic fascination with di- nosaurs and what caused their extinction is understandable, even though we should be equally fascinated with the monarchs of the Carboniferous, the tree lycopods and calamites, and with what caused their extinction (fig. 0.1). Yet, it must be understood that plants are as fascinating as animals, and that they are just as important to the study of biology in general and to understanding evolutionary theory in particular. -
Number of Living Species in Australia and the World
Numbers of Living Species in Australia and the World 2nd edition Arthur D. Chapman Australian Biodiversity Information Services australia’s nature Toowoomba, Australia there is more still to be discovered… Report for the Australian Biological Resources Study Canberra, Australia September 2009 CONTENTS Foreword 1 Insecta (insects) 23 Plants 43 Viruses 59 Arachnida Magnoliophyta (flowering plants) 43 Protoctista (mainly Introduction 2 (spiders, scorpions, etc) 26 Gymnosperms (Coniferophyta, Protozoa—others included Executive Summary 6 Pycnogonida (sea spiders) 28 Cycadophyta, Gnetophyta under fungi, algae, Myriapoda and Ginkgophyta) 45 Chromista, etc) 60 Detailed discussion by Group 12 (millipedes, centipedes) 29 Ferns and Allies 46 Chordates 13 Acknowledgements 63 Crustacea (crabs, lobsters, etc) 31 Bryophyta Mammalia (mammals) 13 Onychophora (velvet worms) 32 (mosses, liverworts, hornworts) 47 References 66 Aves (birds) 14 Hexapoda (proturans, springtails) 33 Plant Algae (including green Reptilia (reptiles) 15 Mollusca (molluscs, shellfish) 34 algae, red algae, glaucophytes) 49 Amphibia (frogs, etc) 16 Annelida (segmented worms) 35 Fungi 51 Pisces (fishes including Nematoda Fungi (excluding taxa Chondrichthyes and (nematodes, roundworms) 36 treated under Chromista Osteichthyes) 17 and Protoctista) 51 Acanthocephala Agnatha (hagfish, (thorny-headed worms) 37 Lichen-forming fungi 53 lampreys, slime eels) 18 Platyhelminthes (flat worms) 38 Others 54 Cephalochordata (lancelets) 19 Cnidaria (jellyfish, Prokaryota (Bacteria Tunicata or Urochordata sea anenomes, corals) 39 [Monera] of previous report) 54 (sea squirts, doliolids, salps) 20 Porifera (sponges) 40 Cyanophyta (Cyanobacteria) 55 Invertebrates 21 Other Invertebrates 41 Chromista (including some Hemichordata (hemichordates) 21 species previously included Echinodermata (starfish, under either algae or fungi) 56 sea cucumbers, etc) 22 FOREWORD In Australia and around the world, biodiversity is under huge Harnessing core science and knowledge bases, like and growing pressure. -
Lessons from 20 Years of Plant Genome Sequencing: an Unprecedented Resource in Need of More Diverse Representation
bioRxiv preprint doi: https://doi.org/10.1101/2021.05.31.446451; this version posted May 31, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Lessons from 20 years of plant genome sequencing: an unprecedented resource in need of more diverse representation Authors: Rose A. Marks1,2,3, Scott Hotaling4, Paul B. Frandsen5,6, and Robert VanBuren1,2 1. Department of Horticulture, Michigan State University, East Lansing, MI 48824, USA 2. Plant Resilience Institute, Michigan State University, East Lansing, MI 48824, USA 3. Department of Molecular and Cell Biology, University of Cape Town, Rondebosch 7701, South Africa 4. School of Biological Sciences, Washington State University, Pullman, WA, USA 5. Department of Plant and Wildlife Sciences, Brigham Young University, Provo, UT, USA 6. Data Science Lab, Smithsonian Institution, Washington, DC, USA Keywords: plants, embryophytes, genomics, colonialism, broadening participation Correspondence: Rose A. Marks, Department of Horticulture, Michigan State University, East Lansing, MI 48824, USA; Email: [email protected]; Phone: (603) 852-3190; ORCID iD: https://orcid.org/0000-0001-7102-5959 Abstract The field of plant genomics has grown rapidly in the past 20 years, leading to dramatic increases in both the quantity and quality of publicly available genomic resources. With an ever- expanding wealth of genomic data from an increasingly diverse set of taxa, unprecedented potential exists to better understand the evolution and genome biology of plants. -
S1. List of Taxa Included in the Disparity Analysis and the Phylogenetic Alysis, with Main References
S1. List of taxa included in the disparity analysis and the phylogenetic alysis, with main references. Taxa in bold are included in the phylogenetic analysis; taxa also indicated by * are included only in the phylogenetic analysis and not in the disparity analysis. Three unpublished arborescent taxa were included on the basis that they showed additional anatomical diversity. 1 Callixylon trunk from the Late Devonian of Marrocco showing large sclerotic nests in pith; 2 Axis from the late Tournaisian of Algeria, previously figured in Galtier (1988), and Galtier & Meyer-Berthaud (2006); 3 Trunk from the late Viséan of Australia. All these specimens and corresponding slides are currently kept in the Paleobotanical collections, Service des Collections, Université Montpellier II, France, under the specimen numbers 600/2/3, JC874 and YB1-2. Main reference Psilophyton* Banks et al., 1975 Aneurophytales Rellimia thomsonii Dannenhoffer & Bonamo, 2003; --- Dannenhoffer et al., 2007. Tetraxylopteris schmidtii Beck, 1957. Proteokalon petryi Scheckler & Banks, 1971. Triloboxylon arnoldii Stein & Beck, 1983. s m Archaeopteridales Callixylon brownii Hoskin & Cross, 1951. r e Callixylon erianum Arnold, 1930. p s o Callixylon huronensis Chitaley & Cai, 2001. n Callixylon newberry Arnold, 1931. m y g Callixylon trifilievii Lemoigne et al., 1983. o r Callixylon zalesskyi Arnold, 1930. P Callixylon sp. Meyer-Berthaud, unpublished data1. Eddya sullivanensis Beck, 1967. Protopityales Protopitys buchiana Scott, 1923; Galtier et al., 1998. P. scotica Walton, 1957. Protopitys sp. Decombeix et al., 2005. Elkinsiales Elkinsia polymorpha Serbet & Rothwell, 1992. Buteoxylales Buteoxylon gordonianum Barnard &Long, 1973; Matten et al., --- 1980. Triradioxylon primaevum Barnard & Long, 1975. Lyginopteridales Laceya hibernica May & Matten, 1983. Tristichia longii Galtier, 1977. -
SYSTÉMATIQUE DES EMBRYOPHYTES Document Illustrant Plus Particulièrement Les Taxons Européens Version 4 Octobre 2007
Université Pierre et Marie Curie (PARIS 6) Préparation à l’agrégation SVSTU, secteur B SYSTÉMATIQUE DES EMBRYOPHYTES Document illustrant plus particulièrement les taxons européens version 4 octobre 2007 Catherine Reeb, Préparation agrégation SVSTU, UPMC Jean-Yves Dubuisson, Laboratoire Paléobotanique et Paléoécologie, équipe Paléodiversité, systématique et évolution des Embryophytes, UPMC Dessin de couverture : extrait d’un traité botanique tibétain Pour Garance Remerciements: merci à Jean et Monique Duperon pour les clés de détermination des familles d’Angiospermes, à A.M pour la reproduction de couverture, à Michaël Manuel et Eric Queinnec pour la partie I de l’introduction. Egalement à tous les illustrateurs qui ont autorisé l’utilisation de leurs documents mis en ligne sur Internet : Françoise Gantet, Prof. I. Foissner, Association Endemia de Nouvelle Calédonie. 1 Table des matières Introduction 3 Les données essentielles pour l’agrégation . 5 I Systématique générale des Embryophytes 6 I.1 Caractères des Embryophytes . 6 I.2 La place des Embryophytes au sein de la lignée verte . 7 I.3 Le groupe frère des Embryophytes . 7 I.4 Relations au sein des Embryophytes :les points acquis aujourd’hui . 8 I.4.1 Marchantiophytes, Bryophytes, Anthocérotophytes à la base des Embryophytes . 8 I.4.2 Les Trachéophytes ou plantes vasculaires, un groupe monophylétique . 9 I.4.3 Les Spermatophytes ou plantes à ovules, un groupe monophylétique . 9 I.5 Quelques points encore en discussion . 11 I.5.1 Position et relations des trois clades basaux (Bryophytes, Marchantiophytes et Anthocérotophytes) 11 I.5.2 Relations au sein des Spermatophytes :l’hypothèse "Gnepine" . 13 II Les principaux clades d’Embryophytes 15 II.1 MARCHANTIOPHYTA:Les Marchantiophytes ou Hépatiques . -
Cycad Leaf Physiology Research Needed 1 August 2017
Cycad leaf physiology research needed 1 August 2017 they contain close to 400 described species. Guiding principles are needed to improve the representation and relevance of these plants in contemporary research agendas. According to Marler, the addition of more descriptive research targeting cycad species is welcomed regardless of the approach. But the adherence to protocols that ensure species relevance would improve the outcomes. Since forest canopy traits define sunfleck qualities, the experimental protocols for studying sunfleck use by newly studied species should be defined from the natural habitats of each species. Moreover, the behavior of cultivated plants often differs from that Healthy juvenile plants of the endangered Cycas of plants in natural settings, and moving from the micronesica thrive in a deep understory habitat where current level of minimal knowledge to a level of they effectively utilize infrequent sunflecks. Credit: adequate knowledge may be reached most rapidly Thomas Marler by studying these plants within their native range rather than in botanic gardens. A phenomenon called context dependency is also pertinent to the needed expansion of cycad research. Do The living cycad species are among the world's environmental factors such as drought influence most threatened plant groups, but are also among how a cycad plant capitalizes on the ephemeral the world's least studied plant groups. The need for access to sunflecks? a greater understanding of basic physiology of cycads has been discussed for decades, yet to Attempts to link phylogenetic subsets of plants date the needed research is lacking. more closely to the broader global research agenda need to be accurate. -
Appendix 1. Systematic Arrangement of the Native Vascular Plants of Mexico
570 J.L. Villase˜nor / Revista Mexicana de Biodiversidad 87 (2016) 559–902 Appendix 1. Systematic arrangement of the native vascular plants of Mexico. The number of the families corresponds to the linear arrangement proposed by APG III (2009), Chase and Reveal (2009), Christenhusz, Chun, et al. (2011), Christenhusz, Reveal, et al. (2011), Haston et al. (2009) and Wearn et al. (2013). In parentheses, the first number indicates the number of genera and the second the number of species recorded for the family in Mexico Ferns and Lycophytes Order Cyatheales 12. Taxaceae (1/1) 17. Culcitaceae (1/1) Angiosperms Lycophytes 18. Plagiogyriaceae (1/1) 19. Cibotiaceae (1/2) Superorder Nymphaeanae Subclass Lycopodiidae 20. Cyatheaceae (3/14) 21. Dicksoniaceae (2/2) Orden Nymphaeales Order Lycopodiales 22. Metaxyaceae (1/1) 3. Cabombaceae (2/2) 1. Lycopodiaceae (4/21) 4. Nymphaeaceae (2/12) Order Polypodiales Order Isoetales 23. Lonchitidaceae (1/1) Superorder Austrobaileyanae 2. Isoetaceae (1/7) 24. Saccolomataceae (1/2) 26. Lindsaeaceae (3/8) Order Selaginellalles Orden Austrobaileyales 27. Dennstaedtiaceae (4/23) 3. Selaginellaceae (1/79) 7. Schisandraceae (2/2) 28. Pteridaceae (33/214) 29. Cystopteridaceae (1/4) Pteridophytes Superorder Chloranthanae 30. Aspleniaceae (4/89) 31. Diplaziopsidaceae (1/1) Subclass Equisetidae Orden Chloranthales 32. Thelypteridaceae (1/70) 8. Chloranthaceae (1/1) 33. Woodsiaceae (1/8) Order Equisetales 35. Onocleaceae (1/1) 1. Equisetaceae (1/6) Superorder Magnolianae 36. Blechnaceae (2/20) 37. Athyriaceae (2/31) Subclass Ophioglossidae Orden Canellales 38. Hypodematiaceae (1/1) 9. Canellaceae (1/1) Order Ophioglossales 39. Dryopteridaceae 10. Winteraceae (1/1) 2. Ophioglossaceae (2/16) (14/159) 40. -
Zusammenfassung Systematische Biologie: Pflanzen
Zusammenfassung Systematische Biologie: Pflanzen - FS18 v0.2 Gleb Ebert 6. M¨arz 2018 Vorwort Diese Zusammenfassung soll den gesamten Stoff der Vorlesung Systematische Biologie: Pflanzen (Stand Fruhjahrssemester¨ 2018) in kompakter Form zusammenfassen. Ich kann leider weder Vollst¨andigkeit noch die Abwesenheit von Fehlern garan- tieren. Fur¨ Fragen, Anregungen oder Verbesserungsvorschl¨agen kann ich unter [email protected] erreicht werden. Die neuste Version dieser Zusammenfassung kann stets unter https://n.ethz.ch/˜glebert/ gefunden werden. 1 1 Landpflanzen 1.2 Stammbaum 2.4 Systematik (nur vervorgehobene Taxa prufungsrelevant)¨ 1.1 Entwicklung • Klasse: Marchantiopsida (Lebermoose) – Bebl¨atterte Lebermoose – Thallose Lebermoose • Klasse: Antheceropsida (Hornmoose) • Klasse: Bryopsida (Laubmoose) – Sphaginidae (Torfmoose) → Deckel ohne Peristom – Andreaeidae (Klaffmoose) → Spalten + Kolumella – Bryidae (Echte Laubmoose) 2 Bryophyta (Moose) → Deckel mit Peristom – Einteilung nach Wuchsform 2.1 Allgemeine Merkmale ∗ Akrokarpe Moose (Gipfelmoose) ∗ Pleuokarpe Moose (Astmoose) • ¨alteste Landpflanzen • Verbreitung durch Sporen (Kryptogamen) • Generationswechsel mit dominantem Gametophyt 2.5 Wuchsformen • Vielzellige Gametangien, Embryobildung • Organisationsstufe: – keine Leitgef¨asse – St¨ammchen, Bl¨attchen – Rhizoiden 2.2 Vorkommen / Eigenschaften • Artenzahl: 25’000 • an Orten mit hoher Luftfeuchtigkeit 1.1.1 Charophyceen vs. Landpflanzen • Lichtbedarf (0.1%) • Trockenheitstoleranz Gemeinsamkeiten neu in Landpflanzen • Temperatur (-30