Ips East Zone Meet Cum National Symposium ·2017
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Major Clades of Agaricales: a Multilocus Phylogenetic Overview
Mycologia, 98(6), 2006, pp. 982–995. # 2006 by The Mycological Society of America, Lawrence, KS 66044-8897 Major clades of Agaricales: a multilocus phylogenetic overview P. Brandon Matheny1 Duur K. Aanen Judd M. Curtis Laboratory of Genetics, Arboretumlaan 4, 6703 BD, Biology Department, Clark University, 950 Main Street, Wageningen, The Netherlands Worcester, Massachusetts, 01610 Matthew DeNitis Vale´rie Hofstetter 127 Harrington Way, Worcester, Massachusetts 01604 Department of Biology, Box 90338, Duke University, Durham, North Carolina 27708 Graciela M. Daniele Instituto Multidisciplinario de Biologı´a Vegetal, M. Catherine Aime CONICET-Universidad Nacional de Co´rdoba, Casilla USDA-ARS, Systematic Botany and Mycology de Correo 495, 5000 Co´rdoba, Argentina Laboratory, Room 304, Building 011A, 10300 Baltimore Avenue, Beltsville, Maryland 20705-2350 Dennis E. Desjardin Department of Biology, San Francisco State University, Jean-Marc Moncalvo San Francisco, California 94132 Centre for Biodiversity and Conservation Biology, Royal Ontario Museum and Department of Botany, University Bradley R. Kropp of Toronto, Toronto, Ontario, M5S 2C6 Canada Department of Biology, Utah State University, Logan, Utah 84322 Zai-Wei Ge Zhu-Liang Yang Lorelei L. Norvell Kunming Institute of Botany, Chinese Academy of Pacific Northwest Mycology Service, 6720 NW Skyline Sciences, Kunming 650204, P.R. China Boulevard, Portland, Oregon 97229-1309 Jason C. Slot Andrew Parker Biology Department, Clark University, 950 Main Street, 127 Raven Way, Metaline Falls, Washington 99153- Worcester, Massachusetts, 01609 9720 Joseph F. Ammirati Else C. Vellinga University of Washington, Biology Department, Box Department of Plant and Microbial Biology, 111 355325, Seattle, Washington 98195 Koshland Hall, University of California, Berkeley, California 94720-3102 Timothy J. -
Competing Sexual and Asexual Generic Names in <I
doi:10.5598/imafungus.2018.09.01.06 IMA FUNGUS · 9(1): 75–89 (2018) Competing sexual and asexual generic names in Pucciniomycotina and ARTICLE Ustilaginomycotina (Basidiomycota) and recommendations for use M. Catherine Aime1, Lisa A. Castlebury2, Mehrdad Abbasi1, Dominik Begerow3, Reinhard Berndt4, Roland Kirschner5, Ludmila Marvanová6, Yoshitaka Ono7, Mahajabeen Padamsee8, Markus Scholler9, Marco Thines10, and Amy Y. Rossman11 1Purdue University, Department of Botany and Plant Pathology, West Lafayette, IN 47901, USA; corresponding author e-mail: maime@purdue. edu 2Mycology & Nematology Genetic Diversity and Biology Laboratory, USDA-ARS, Beltsville, MD 20705, USA 3Ruhr-Universität Bochum, Geobotanik, ND 03/174, D-44801 Bochum, Germany 4ETH Zürich, Plant Ecological Genetics, Universitätstrasse 16, 8092 Zürich, Switzerland 5Department of Biomedical Sciences and Engineering, National Central University, 320 Taoyuan City, Taiwan 6Czech Collection of Microoorganisms, Faculty of Science, Masaryk University, 625 00 Brno, Czech Republic 7Faculty of Education, Ibaraki University, Mito, Ibaraki 310-8512, Japan 8Systematics Team, Manaaki Whenua Landcare Research, Auckland 1072, New Zealand 9Staatliches Museum f. Naturkunde Karlsruhe, Erbprinzenstr. 13, D-76133 Karlsruhe, Germany 10Senckenberg Gesellschaft für Naturforschung, Frankfurt (Main), Germany 11Department of Botany & Plant Pathology, Oregon State University, Corvallis, OR 97333, USA Abstract: With the change to one scientific name for pleomorphic fungi, generic names typified by sexual and Key words: asexual morphs have been evaluated to recommend which name to use when two names represent the same genus Basidiomycetes and thus compete for use. In this paper, generic names in Pucciniomycotina and Ustilaginomycotina are evaluated pleomorphic fungi based on their type species to determine which names are synonyms. Twenty-one sets of sexually and asexually taxonomy typified names in Pucciniomycotina and eight sets in Ustilaginomycotina were determined to be congeneric and protected names compete for use. -
Monilochaetes and Allied Genera of the Glomerellales, and a Reconsideration of Families in the Microascales
available online at www.studiesinmycology.org StudieS in Mycology 68: 163–191. 2011. doi:10.3114/sim.2011.68.07 Monilochaetes and allied genera of the Glomerellales, and a reconsideration of families in the Microascales M. Réblová1*, W. Gams2 and K.A. Seifert3 1Department of Taxonomy, Institute of Botany of the Academy of Sciences, CZ – 252 43 Průhonice, Czech Republic; 2Molenweg 15, 3743CK Baarn, The Netherlands; 3Biodiversity (Mycology and Botany), Agriculture and Agri-Food Canada, Ottawa, Ontario, K1A 0C6, Canada *Correspondence: Martina Réblová, [email protected] Abstract: We examined the phylogenetic relationships of two species that mimic Chaetosphaeria in teleomorph and anamorph morphologies, Chaetosphaeria tulasneorum with a Cylindrotrichum anamorph and Australiasca queenslandica with a Dischloridium anamorph. Four data sets were analysed: a) the internal transcribed spacer region including ITS1, 5.8S rDNA and ITS2 (ITS), b) nc28S (ncLSU) rDNA, c) nc18S (ncSSU) rDNA, and d) a combined data set of ncLSU-ncSSU-RPB2 (ribosomal polymerase B2). The traditional placement of Ch. tulasneorum in the Microascales based on ncLSU sequences is unsupported and Australiasca does not belong to the Chaetosphaeriaceae. Both holomorph species are nested within the Glomerellales. A new genus, Reticulascus, is introduced for Ch. tulasneorum with associated Cylindrotrichum anamorph; another species of Reticulascus and its anamorph in Cylindrotrichum are described as new. The taxonomic structure of the Glomerellales is clarified and the name is validly published. As delimited here, it includes three families, the Glomerellaceae and the newly described Australiascaceae and Reticulascaceae. Based on ITS and ncLSU rDNA sequence analyses, we confirm the synonymy of the anamorph generaDischloridium with Monilochaetes. -
In Vitro Efficacy of Fungicides and Bioagents Against Wilt of Pigeonpea Caused by Neocosmospora Vasinfecta
RESEARCH ARTICLE SCIENCE INTERNATIONAL DOI: 10.17311/sciintl.2015.82.84 In vitro Efficacy of Fungicides and Bioagents Against Wilt of Pigeonpea Caused by Neocosmospora vasinfecta 1R.R. Khadse, 1G.K. Giri, 2S.A. Raut and 1B.B. Bhoye 1Department of Plant Pathology, Dr. Panjabrao Deashmukh Krishi Vidyapeeth, Akola, India 2Mahatma Phule Agricultural University, Rahuri, Dist Ahmednagar, India ABSTRACT Background: Pigeon pea (Cajanus cajan) is one of the important leguminous crop of the tropics and subtropics and is infected by the wilt pathogen Neocosmospora vasinfecta in addition to Fusarium udum. Objective: Hence, the study was undertaken to see the in vitro effect of different fungicides (Thiram 75 WP, Carbendazim 50 WP, Chlorothalonil 75 WP, Metalaxyl MZ 72 WP, Thiram+Cabendazim (2:1), Carbendazim+mancozeb 75 WP, Tricyclazole+Mancozeb 80 WP, Zineb+Hexaconazole 72 WP) and bioagents (Trichoderma harzianum, Pseudomonas fluorescens, Bacillus subtilis) against the pathogen. Methodology: The efficacy of fungicides was assayed by poisoned food technique and of bioagents was assayed by dual culture technique. Results: It was found that among eight fungicides tested carbendazim (0.1%), combination of carbendazim+mancozeb (0.2 %) and thiram+carbendazim 2:1 (0.3%) exhibited cent per cent inhibition of N. vasinfecta, other fungicides were also significant over control. Whereas among bioagents tested, Trichoderma herzianum (50.30%) showed maximum per cent growth inhibition of the pathogen followed by Bacillus subtilis (41.47%). Conclusion: Thus it was proved that the fungicides viz. carbendazim, combinations of carbendazim+mancozeb and thiram+carbendazim as well as bioagent, T. herzianum were effective against Neocosmospora wilt of pigeon pea under in vitro condition. -
Colletotrichum – Names in Current Use
Online advance Fungal Diversity Colletotrichum – names in current use Hyde, K.D.1,7*, Cai, L.2, Cannon, P.F.3, Crouch, J.A.4, Crous, P.W.5, Damm, U. 5, Goodwin, P.H.6, Chen, H.7, Johnston, P.R.8, Jones, E.B.G.9, Liu, Z.Y.10, McKenzie, E.H.C.8, Moriwaki, J.11, Noireung, P.1, Pennycook, S.R.8, Pfenning, L.H.12, Prihastuti, H.1, Sato, T.13, Shivas, R.G.14, Tan, Y.P.14, Taylor, P.W.J.15, Weir, B.S.8, Yang, Y.L.10,16 and Zhang, J.Z.17 1,School of Science, Mae Fah Luang University, Chaing Rai, Thailand 2Research & Development Centre, Novozymes, Beijing 100085, PR China 3CABI, Bakeham Lane, Egham, Surrey TW20 9TY, UK and Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, UK 4Cereal Disease Laboratory, U.S. Department of Agriculture, Agricultural Research Service, 1551 Lindig Street, St. Paul, MN 55108, USA 5CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands 6School of Environmental Sciences, University of Guelph, Guelph, Ontario, N1G 2W1, Canada 7International Fungal Research & Development Centre, The Research Institute of Resource Insects, Chinese Academy of Forestry, Bailongsi, Kunming 650224, PR China 8Landcare Research, Private Bag 92170, Auckland 1142, New Zealand 9BIOTEC Bioresources Technology Unit, National Center for Genetic Engineering and Biotechnology, NSTDA, 113 Thailand Science Park, Paholyothin Road, Khlong 1, Khlong Luang, Pathum Thani, 12120, Thailand 10Guizhou Academy of Agricultural Sciences, Guiyang, Guizhou 550006 PR China 11Hokuriku Research Center, National Agricultural Research Center, -
(US) 38E.85. a 38E SEE", A
USOO957398OB2 (12) United States Patent (10) Patent No.: US 9,573,980 B2 Thompson et al. (45) Date of Patent: Feb. 21, 2017 (54) FUSION PROTEINS AND METHODS FOR 7.919,678 B2 4/2011 Mironov STIMULATING PLANT GROWTH, 88: R: g: Ei. al. 1 PROTECTING PLANTS FROM PATHOGENS, 3:42: ... g3 is et al. A61K 39.00 AND MMOBILIZING BACILLUS SPORES 2003/0228679 A1 12.2003 Smith et al." ON PLANT ROOTS 2004/OO77090 A1 4/2004 Short 2010/0205690 A1 8/2010 Blä sing et al. (71) Applicant: Spogen Biotech Inc., Columbia, MO 2010/0233.124 Al 9, 2010 Stewart et al. (US) 38E.85. A 38E SEE",teWart et aal. (72) Inventors: Brian Thompson, Columbia, MO (US); 5,3542011/0321197 AllA. '55.12/2011 SE",Schön et al.i. Katie Thompson, Columbia, MO (US) 2012fO259101 A1 10, 2012 Tan et al. 2012fO266327 A1 10, 2012 Sanz Molinero et al. (73) Assignee: Spogen Biotech Inc., Columbia, MO 2014/0259225 A1 9, 2014 Frank et al. US (US) FOREIGN PATENT DOCUMENTS (*) Notice: Subject to any disclaimer, the term of this CA 2146822 A1 10, 1995 patent is extended or adjusted under 35 EP O 792 363 B1 12/2003 U.S.C. 154(b) by 0 days. EP 1590466 B1 9, 2010 EP 2069504 B1 6, 2015 (21) Appl. No.: 14/213,525 WO O2/OO232 A2 1/2002 WO O306684.6 A1 8, 2003 1-1. WO 2005/028654 A1 3/2005 (22) Filed: Mar. 14, 2014 WO 2006/O12366 A2 2/2006 O O WO 2007/078127 A1 7/2007 (65) Prior Publication Data WO 2007/086898 A2 8, 2007 WO 2009037329 A2 3, 2009 US 2014/0274707 A1 Sep. -
Notes on Currently Accepted Species of Colletotrichum
Mycosphere 7(8) 1192-1260(2016) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/si/2c/9 Copyright © Guizhou Academy of Agricultural Sciences Notes on currently accepted species of Colletotrichum Jayawardena RS1,2, Hyde KD2,3, Damm U4, Cai L5, Liu M1, Li XH1, Zhang W1, Zhao WS6 and Yan JY1,* 1 Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, People’s Republic of China 2 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 3 Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China 4 Senckenberg Museum of Natural History Görlitz, PF 300 154, 02806 Görlitz, Germany 5State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China 6Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing 100193, China. Jayawardena RS, Hyde KD, Damm U, Cai L, Liu M, Li XH, Zhang W, Zhao WS, Yan JY 2016 – Notes on currently accepted species of Colletotrichum. Mycosphere 7(8) 1192–1260, Doi 10.5943/mycosphere/si/2c/9 Abstract Colletotrichum is an economically important plant pathogenic genus worldwide, but can also have endophytic or saprobic lifestyles. The genus has undergone numerous revisions in the past decades with the addition, typification and synonymy of many species. In this study, we provide an account of the 190 currently accepted species, one doubtful species and one excluded species that have molecular data. Species are listed alphabetically and annotated with their habit, host and geographic distribution, phylogenetic position, their sexual morphs and uses (if there are any known). -
Book of Abstracts
BOOK OF ABSTRACTS OPENING SESSION Opening lecture 1 Global change is a challenging parameter for plant pest risk assessment. Charles Manceau1 1Anses – French agency for food, environmental and occupational health & safety, 7 rue Jean Dixméras, F- 49044 Angers Cedex 01, France Global change refers to planetary-scale changes in the Earth system which includes human society. Global change encompasses climate, land use, biodiversity, trade of plant and plant parts and has a strong and well defined impact on plant health despite the short time frame under consideration. Emerging plant diseases present many serious issues for human well-being, whether in agricultural, forestry, environmental or regulatory arenas. The temporal and spatial scales of plant disease emergence are defining features related to local, national and global drivers. These include the increases in global trade, of course, but also the introduction of novel crop, changes in production systems, interactions occurring at the landscape level and the impact of climate change. Agroecology is a one of the drivers that raise questions about the predictability of emerging plant diseases Pest risk analysis (PRA) is the process used by National Plant Protection Organizations (NPPOs) as the technical justification for phytosanitary measures. PRA is defined by the International Plant Protection Convention (IPPC) as “the process of evaluating biological or other scientific and economic evidence to determine whether a pest should be regulated and the strength of any phytosanitary measures to be taken against it.” The process requires a risk assessment to characterize the risk and risk management to determine appropriate measures. PRAs are mainly performed in the context of the international trade. -
The Colletotrichum Destructivum Species Complex – Hemibiotrophic Pathogens of Forage and field Crops
available online at www.studiesinmycology.org STUDIES IN MYCOLOGY 79: 49–84. The Colletotrichum destructivum species complex – hemibiotrophic pathogens of forage and field crops U. Damm1*, R.J. O'Connell2, J.Z. Groenewald1, and P.W. Crous1,3,4 1CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands; 2UMR1290 BIOGER-CPP, INRA-AgroParisTech, 78850 Thiverval-Grignon, France; 3Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0002, South Africa; 4Wageningen University and Research Centre (WUR), Laboratory of Phytopathology, Droevendaalsesteeg 1, 6708 PB Wageningen, The Netherlands *Correspondence: U. Damm, [email protected], Present address: Senckenberg Museum of Natural History Görlitz, PF 300 154, 02806 Görlitz, Germany. Abstract: Colletotrichum destructivum is an important plant pathogen, mainly of forage and grain legumes including clover, alfalfa, cowpea and lentil, but has also been reported as an anthracnose pathogen of many other plants worldwide. Several Colletotrichum isolates, previously reported as closely related to C. destructivum, are known to establish hemibiotrophic infections in different hosts. The inconsistent application of names to those isolates based on outdated species concepts has caused much taxonomic confusion, particularly in the plant pathology literature. A multilocus DNA sequence analysis (ITS, GAPDH, CHS-1, HIS3, ACT, TUB2) of 83 isolates of C. destructivum and related species revealed 16 clades that are recognised as separate species in the C. destructivum complex, which includes C. destructivum, C. fuscum, C. higginsianum, C. lini and C. tabacum. Each of these species is lecto-, epi- or neotypified in this study. Additionally, eight species, namely C. americae- borealis, C. antirrhinicola, C. bryoniicola, C. -
Tomato Chlorotic Dwarf Viroid in Hawai'i
Western Plant Diagnostic Network1 First Detector News A Quarterly Pest Update for WPDN First Detectors Fall 2017 edition, volume 10, number 4 In this Issue Dear First Detectors, Our Fall newsletter is a little late due to Page 1: Editor’s comments colds and flus circulating around the University of California, Davis, and a few new developing stories! Pages 2 – 4: Tomato crown rot disease spreading to new This edition discusses two tomato diseases, one fungal areas (tomato crown rot) and the other caused by a viroid (tomato chlorotic dwarf). Both are dangerous diseases for the Pages 5 - 6: Tomato chlorotic tomato industry. Medflies have invaded California once dwarf viroid in Hawai’i again, with outbreaks in Solano, Los Angeles, and San Mateo counties. They just keep coming! A new virus is infecting Pages 7 - 8: Three Medfly grapes in Washington – tobacco ringspot virus. This virus not quarantines in CA only infects tobacco, but several other hosts, including many fruit crops and grapes. Huanglongbing, the fatal citrus Pages 8 – 9: New virus disease of grapes in WA bacterial disease vectored by the Asian citrus psyllid, is steadily spreading in southern California. Page 10: Asian citrus psyllid and huanglongbing bacterial I have an erratum to confess. In the Summer 2017 edition I disease spread in CA identified this pallet marking as Canada (CA). CN stand for China. I heard from several USDA Plant Contact us at the WPDN Regional Center at UC Davis: Protection and Quarantine folks. Thanks Phone: 530 754 2255 to them for paying attention! Email: [email protected] Web: https://wpdn.org Editor: Richard W. -
Colletotrichum: Biological Control, Bio- Catalyst, Secondary Metabolites and Toxins
Mycosphere 7(8) 1164-1176(2016) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/si/2c/7 Copyright © Guizhou Academy of Agricultural Sciences Mycosphere Essay 16: Colletotrichum: Biological control, bio- catalyst, secondary metabolites and toxins Jayawardena RS1,2, Li XH1, Liu M1, Zhang W1 and Yan JY1* 1 Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, People’s Republic of China 2 Center of Excellence in Fungal Research and School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand Jayawardena RS, Li XH, Liu M, Zhang W, Yan JY 2016 – Mycosphere Essay 16: Colletotrichum: Biological control, bio-catalyst, secondary metabolites and toxins. Mycosphere 7(8) 1164–1176, Doi 10.5943/mycosphere/si/2c/7 Abstract The genus Colletotrichum has received considerable attention in the past decade because of its role as an important plant pathogen. The importance of Colletotrichum with regard to industrial application has however, received little attention from scientists over many years. The aim of the present paper is to explore the importance of Colletotrichum species as bio-control agents and as a bio-catalyst as well as secondary metabolites and toxin producers. Often the names assigned to the above four industrial applications have lacked an accurate taxonomic basis and this needs consideration. The current paper provides detailed background of the above topics. Key words – biotransformation – colletotrichin – mycoherbicide – mycoparasites – pathogenisis – phytopathogen Introduction Colletotrichum was introduced by Corda (1831), and is a coelomycete belonging to the family Glomerellaceae (Maharachchikumbura et al. 2015, 2016). Species of this genus are widely known as pathogens of economical crops worldwide (Cannon et al. -
Sclerotium Rolfsii; Causative Organism of Southern Blight, Stem Rot, White Mold and Sclerotia Rot Disease
Available online a t www.scholarsresearchlibrary.com Scholars Research Library Annals of Biological Research, 2015, 6 (11):78-89 (http://scholarsresearchlibrary.com/archive.html) ISSN 0976-1233 CODEN (USA): ABRNBW Sclerotium rolfsii; Causative organism of southern blight, stem rot, white mold and sclerotia rot disease 1Liamngee Kator, 1Zakki Yula Hosea and 2Onah Daniel Oche 1Department of Biological Sciences, Benue State University Makurdi, Nigeria 2Department of Medical Laboratory Science, School of Health Technology, Agasha, Benue State _____________________________________________________________________________________________ ABSTRACT Sclerotium rolfsii is a soil borne pathogen that causes stem rot disease on plants. It primarily attacks host stems including roots, fruits, petioles and leaves under favourable conditions. It commonly occurs in the tropics, subtropics and other warm temperate regions of the world. Common hosts are legumes, crucifers and cucurbits. On a global perspective, estimated losses of 10 – 20 million dollars associated with S. rolfsii have been recorded with yield depletion ranging from 1 – 60% in fields. Sclerotia serve as primary inoculum for the pathogen and are spread to uninfected areas by wind, water, animals and soil. Control measures include excluding the pathogen from the area, plant removal, soil removal, soil treatment, heat, solarization, chemical soil treatment, cultural practices, resistance and transgenic plant resistance, plant treatment, crop rotation, amongst others. Despite considerable research on this pathogen, its control continues to be a problem. Keywords: Sclerotium rolfsii, stem rot, white mold, stem blight. _____________________________________________________________________________________________ INTRODUCTION Sclerotium rolfsii is a destructive soil borne plant pathogen which causes Southern blight disease on a wide variety of plants. In 1928, the United States Department of Agriculture reported that S.