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Competing Sexual and Asexual Generic Names in <I
doi:10.5598/imafungus.2018.09.01.06 IMA FUNGUS · 9(1): 75–89 (2018) Competing sexual and asexual generic names in Pucciniomycotina and ARTICLE Ustilaginomycotina (Basidiomycota) and recommendations for use M. Catherine Aime1, Lisa A. Castlebury2, Mehrdad Abbasi1, Dominik Begerow3, Reinhard Berndt4, Roland Kirschner5, Ludmila Marvanová6, Yoshitaka Ono7, Mahajabeen Padamsee8, Markus Scholler9, Marco Thines10, and Amy Y. Rossman11 1Purdue University, Department of Botany and Plant Pathology, West Lafayette, IN 47901, USA; corresponding author e-mail: maime@purdue. edu 2Mycology & Nematology Genetic Diversity and Biology Laboratory, USDA-ARS, Beltsville, MD 20705, USA 3Ruhr-Universität Bochum, Geobotanik, ND 03/174, D-44801 Bochum, Germany 4ETH Zürich, Plant Ecological Genetics, Universitätstrasse 16, 8092 Zürich, Switzerland 5Department of Biomedical Sciences and Engineering, National Central University, 320 Taoyuan City, Taiwan 6Czech Collection of Microoorganisms, Faculty of Science, Masaryk University, 625 00 Brno, Czech Republic 7Faculty of Education, Ibaraki University, Mito, Ibaraki 310-8512, Japan 8Systematics Team, Manaaki Whenua Landcare Research, Auckland 1072, New Zealand 9Staatliches Museum f. Naturkunde Karlsruhe, Erbprinzenstr. 13, D-76133 Karlsruhe, Germany 10Senckenberg Gesellschaft für Naturforschung, Frankfurt (Main), Germany 11Department of Botany & Plant Pathology, Oregon State University, Corvallis, OR 97333, USA Abstract: With the change to one scientific name for pleomorphic fungi, generic names typified by sexual and Key words: asexual morphs have been evaluated to recommend which name to use when two names represent the same genus Basidiomycetes and thus compete for use. In this paper, generic names in Pucciniomycotina and Ustilaginomycotina are evaluated pleomorphic fungi based on their type species to determine which names are synonyms. Twenty-one sets of sexually and asexually taxonomy typified names in Pucciniomycotina and eight sets in Ustilaginomycotina were determined to be congeneric and protected names compete for use. -
(US) 38E.85. a 38E SEE", A
USOO957398OB2 (12) United States Patent (10) Patent No.: US 9,573,980 B2 Thompson et al. (45) Date of Patent: Feb. 21, 2017 (54) FUSION PROTEINS AND METHODS FOR 7.919,678 B2 4/2011 Mironov STIMULATING PLANT GROWTH, 88: R: g: Ei. al. 1 PROTECTING PLANTS FROM PATHOGENS, 3:42: ... g3 is et al. A61K 39.00 AND MMOBILIZING BACILLUS SPORES 2003/0228679 A1 12.2003 Smith et al." ON PLANT ROOTS 2004/OO77090 A1 4/2004 Short 2010/0205690 A1 8/2010 Blä sing et al. (71) Applicant: Spogen Biotech Inc., Columbia, MO 2010/0233.124 Al 9, 2010 Stewart et al. (US) 38E.85. A 38E SEE",teWart et aal. (72) Inventors: Brian Thompson, Columbia, MO (US); 5,3542011/0321197 AllA. '55.12/2011 SE",Schön et al.i. Katie Thompson, Columbia, MO (US) 2012fO259101 A1 10, 2012 Tan et al. 2012fO266327 A1 10, 2012 Sanz Molinero et al. (73) Assignee: Spogen Biotech Inc., Columbia, MO 2014/0259225 A1 9, 2014 Frank et al. US (US) FOREIGN PATENT DOCUMENTS (*) Notice: Subject to any disclaimer, the term of this CA 2146822 A1 10, 1995 patent is extended or adjusted under 35 EP O 792 363 B1 12/2003 U.S.C. 154(b) by 0 days. EP 1590466 B1 9, 2010 EP 2069504 B1 6, 2015 (21) Appl. No.: 14/213,525 WO O2/OO232 A2 1/2002 WO O306684.6 A1 8, 2003 1-1. WO 2005/028654 A1 3/2005 (22) Filed: Mar. 14, 2014 WO 2006/O12366 A2 2/2006 O O WO 2007/078127 A1 7/2007 (65) Prior Publication Data WO 2007/086898 A2 8, 2007 WO 2009037329 A2 3, 2009 US 2014/0274707 A1 Sep. -
Molecular Approaches to Detect and Control Cercospora Kikuchii In
Louisiana State University LSU Digital Commons LSU Doctoral Dissertations Graduate School 2012 Molecular Approaches to Detect and Control Cercospora kikuchii in Soybeans Ashok Kumar Chanda Louisiana State University and Agricultural and Mechanical College, [email protected] Follow this and additional works at: https://digitalcommons.lsu.edu/gradschool_dissertations Part of the Plant Sciences Commons Recommended Citation Chanda, Ashok Kumar, "Molecular Approaches to Detect and Control Cercospora kikuchii in Soybeans" (2012). LSU Doctoral Dissertations. 3002. https://digitalcommons.lsu.edu/gradschool_dissertations/3002 This Dissertation is brought to you for free and open access by the Graduate School at LSU Digital Commons. It has been accepted for inclusion in LSU Doctoral Dissertations by an authorized graduate school editor of LSU Digital Commons. For more information, please [email protected]. MOLECULAR APPROACHES TO DETECT AND CONTROL CERCOSPORA KIKUCHII IN SOYBEANS A Dissertation Submitted to the Graduate Faculty of the Louisiana State University and Agricultural and Mechanical College In partial fulfillment of the requirements for the degree of Doctor of Philosophy in The Department of Plant Pathology and Crop Physiology by Ashok Kumar Chanda B.S., Acharya N. G. Ranga Agricultural University, 2001 M.S., Acharya N. G. Ranga Agricultural University, 2004 August 2012 DEDICATION This work is dedicated to my Dear Mother, PADMAVATHI Dear Father, MADHAVA RAO Sweet Wife, MALA Little Angel, HAMSINI ii ACKNOWLEDGEMENTS I would like to express my sincere gratitude to my advisors Dr. Zhi-Yuan Chen and Dr. Raymond Schneider, for giving me the opportunity to pursue this doctoral program, valuable guidance throughout my research as well as freedom to choose my work, kindness and constant encouragement, and teaching me how to become a molecular plant pathologist. -
Ray G. Woods, R. Nigel Stringer, Debbie A. Evans and Arthur O. Chater
Ray G. Woods, R. Nigel Stringer, Debbie A. Evans and Arthur O. Chater Summary The rust fungi are a group of specialised plant pathogens. Conserving them seems to fly in the face of reason. Yet as our population grows and food supplies become more precarious, controlling pathogens of crop plants becomes more imperative. Breeding resistance genes into such plants has proved to be the most cost effective solution. Such resistance genes evolve only in plants challenged by pathogens. We hope this report will assist in prioritising the conservation of natural ecosystems and traditional agro-ecosystems that are likely to be the richest sources of resistance genes. Despite its small size (11% of mainland Britain) Wales has supported 225 rust fungi taxa (including 199 species) representing 78% of the total British mainland rust species. For the first time using widely accepted international criteria and data collected from a number of mycologists and institutions, a Welsh regional threat status is offered for all native Welsh rust taxa. The results are compared with other published Red Lists for Wales. Information is also supplied in the form of a census catalogue, detailing the rust taxa recorded from each of the 13 Welsh vice-counties. Of the 225 rust taxa so far recorded from Wales 7 are probably extinct (3% of the total), and 39 (18%) are threatened with extinction. Of this latter total 13 taxa (6%) are considered to be Critically Endangered, 15 (7%) to be Endangered and 13 (6%) to be Vulnerable. A further 20 taxa (9%) are Near Threatened, whilst 15 taxa (7%) lacked sufficient data to permit evaluation. -
Ray G. Woods, R. Nigel Stringer, Debbie A. Evans and Arthur O. Chater
Ray G. Woods, R. Nigel Stringer, Debbie A. Evans and Arthur O. Chater Summary The rust fungi are a group of specialised plant pathogens. Conserving them seems to fly in the face of reason. Yet as our population grows and food supplies become more precarious, controlling pathogens of crop plants becomes more imperative. Breeding resistance genes into such plants has proved to be the most cost effective solution. Such resistance genes evolve only in plants challenged by pathogens. We hope this report will assist in prioritising the conservation of natural ecosystems and traditional agro-ecosystems that are likely to be the richest sources of resistance genes. Despite its small size (11% of mainland Britain) Wales has supported 225 rust fungi taxa (including 199 species) representing 78% of the total British mainland rust species. For the first time using widely accepted international criteria and data collected from a number of mycologists and institutions, a Welsh regional threat status is offered for all native Welsh rust taxa. The results are compared with other published Red Lists for Wales. Information is also supplied in the form of a census catalogue, detailing the rust taxa recorded from each of the 13 Welsh vice-counties. Of the 225 rust taxa so far recorded from Wales 7 are probably extinct (3% of the total), and 39 (18%) are threatened with extinction. Of this latter total 13 taxa (6%) are considered to be Critically Endangered, 15 (7%) to be Endangered and 13 (6%) to be Vulnerable. A further 20 taxa (9%) are Near Threatened, whilst 15 taxa (7%) lacked sufficient data to permit evaluation. -
Characterising Plant Pathogen Communities and Their Environmental Drivers at a National Scale
Lincoln University Digital Thesis Copyright Statement The digital copy of this thesis is protected by the Copyright Act 1994 (New Zealand). This thesis may be consulted by you, provided you comply with the provisions of the Act and the following conditions of use: you will use the copy only for the purposes of research or private study you will recognise the author's right to be identified as the author of the thesis and due acknowledgement will be made to the author where appropriate you will obtain the author's permission before publishing any material from the thesis. Characterising plant pathogen communities and their environmental drivers at a national scale A thesis submitted in partial fulfilment of the requirements for the Degree of Doctor of Philosophy at Lincoln University by Andreas Makiola Lincoln University, New Zealand 2019 General abstract Plant pathogens play a critical role for global food security, conservation of natural ecosystems and future resilience and sustainability of ecosystem services in general. Thus, it is crucial to understand the large-scale processes that shape plant pathogen communities. The recent drop in DNA sequencing costs offers, for the first time, the opportunity to study multiple plant pathogens simultaneously in their naturally occurring environment effectively at large scale. In this thesis, my aims were (1) to employ next-generation sequencing (NGS) based metabarcoding for the detection and identification of plant pathogens at the ecosystem scale in New Zealand, (2) to characterise plant pathogen communities, and (3) to determine the environmental drivers of these communities. First, I investigated the suitability of NGS for the detection, identification and quantification of plant pathogens using rust fungi as a model system. -
Soybean Rust in the United States
Iowa State University Capstones, Theses and Retrospective Theses and Dissertations Dissertations 2007 Soybean rust in the United States: assess its potential epidemic ranges and frequency based on disease limiting factors, disease attributes, and comparative epidemiology Xun Li Iowa State University Follow this and additional works at: https://lib.dr.iastate.edu/rtd Part of the Plant Pathology Commons Recommended Citation Li, Xun, "Soybean rust in the United States: assess its potential epidemic ranges and frequency based on disease limiting factors, disease attributes, and comparative epidemiology" (2007). Retrospective Theses and Dissertations. 15973. https://lib.dr.iastate.edu/rtd/15973 This Dissertation is brought to you for free and open access by the Iowa State University Capstones, Theses and Dissertations at Iowa State University Digital Repository. It has been accepted for inclusion in Retrospective Theses and Dissertations by an authorized administrator of Iowa State University Digital Repository. For more information, please contact [email protected]. Soybean rust in the United States: assess its potential epidemic ranges and frequency based on disease limiting factors, disease attributes, and comparative epidemiology by Xun Li A dissertation submitted to the graduate faculty in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY Major: Plant Pathology Program of Study Committee: XiaoBing Yang, Major Professor Mark Gleason William Gutowski, Jr. Mark Kaiser Forrest Nutter, Jr. Iowa State University Ames, Iowa 2007 Copyright © Xun Li, 2007. All rights reserved. UMI Number: 3259497 UMI Microform 3259497 Copyright 2007 by ProQuest Information and Learning Company. All rights reserved. This microform edition is protected against unauthorized copying under Title 17, United States Code. -
(Fungi) Capítulo
CAPÍTULO 3.1 | CHAPTER 3.1 LISTA DOS FUNGOS (FUNGI) LIST OF FUNGI (FUNGI) Ireneia Melo & José Cardoso Jardim Botânico, Museu Nacional de História Natural, Universidade de Lisboa, Centro de Biologia Ambiental, R. da Escola Politécnica, 58, 1250 -102 Lisboa, Portugal; e-mail: [email protected] D FUNGI MA M PS D S Reino Chromista Phylum Oomycota Classe Oomycetes Subclasse Albuginomycetidae Ordem Albuginales Albuginaceae Albugo bliti (Biv.) Kuntze M Albugo candida (Pers.) Roussel M Albugo portulacae (DC. ex Duby) Kuntze M Albugo tragopogonis (DC.) Gray M Subclasse Peronosporomycetidae Ordem Peronosporales Peronosporaceae Peronospora alta Fuckel PS Peronospora arborescens (Berk.) de Bary M Peronospora rumicis Corda M Plasmopara viticola (Berk. & G. Winter) Berl. & De Toni M Subclasse Saprolegniomycetidae Ordem Pythiales Pythiaceae Phytophthora infestans (Mont.) de Bary M Reino Fungi Phylum Glomeromycota Classe Glomeromycetes Subclasse Incertae sedis Ordem Glomerales Glomeraceae Glomus fasciculatus (Thaxt.) Gerd. & Trappe M Glomus microcarpum Tul. & C. Tul. M Phylum Zygomycota Classe Zygomycetes Subclasse Incertae sedis Ordem Endogonales Endogonaceae Endogone flammicorona Trappe & Gerd. M Ordem Mucorales Choanephoraceae Choanephora cucurbitarum (Berk. & Ravenel) Thaxt. M Mucoraceae Rhizopus stolonifer (Ehrenb.) Vuill. M Pilobolaceae Pilobolus crystallinus (F.H. Wigg.) Tode M MA – quando nenhuma informação está disponível sobre a ocorrência numa ilha em particular (when no information was available concerning island occurrence); M – Madeira; PS – Porto Santo; D – Desertas; S – Selvagens; END – endémica (endemic); MAC – Macaronésia (Macaronesia). 73 D FUNGI MA M PS D S Subreino Dikaria Phylum Ascomycota Subphylum Pezizomycotina Classe Dothideomycetes Subclasse Dothideomycetidae Ordem Capnodiales Capnodiaceae Caldariomyces fumago Woron. M Capnodium citri Berk. & Desm. M Capnodium mangiferum Cooke & Broome M Capnodium nerii Rabenh. -
Fungi and Fungus-Like Organisms of Homilsha Forests National Park, Ukraine
Fungi and fungus-like organisms of Homilsha Forests National Park, Ukraine 1* 1 2,3 OLEH V. PRYLUTSKYI , OLEXANDER YU. AKULOV , DMITRY V. LEONTYEV , ALEXANDER V. ORDY- 4 1 1 5 NETS , IRYNA I. YATSIUK , ANDRIY S. USICHENKO & ANTON O. SAVCHENKO 1V.N. Karazin Kharkiv National University, Svobody sq., 4, Kharkiv 61022 Ukraine 2H.S. Skovoroda Kharkiv National Pedagogical University, Valentynivs'ka str. 2, Kharkiv 61168 Ukraine 3Kharkiv State Zooveterinary Academy, Akademichna str. 1, p/o Mala Danylivka, Kharkiv oblast 62341 Ukraine 4University of Kassel, Heinrich-Plett-Str. 40, Kassel D-34132 Germany 5University of Tartu, Vanemuise 46, 51014, Tartu, Estonia CORRESPONDENCE TO: [email protected] ABSTRACT − The annotated checklist of fungi and fungus-like organisms, recorded in the Homilsha Forests National Park, Eastern Ukraine, is given. The list includes 1469 species and infraspecific taxa belonging to 10 phyla of Fungi, Amoebozoa, Stramenopila, Rhizaria and Discoba. For species studied by the authors of this checklist, names are accompanied by species abundance status (Rare, Occasional and Common). Names are also annotated by literature references (if available); however, the majority of taxa are reported for the first time. Thirty names from the literature could not be interpreted and these literature records are treated separately from the main list. KEY WORDS − mycota, myxomycetes, Basidiomycota, Ascomycota, Ukraine, biodiversity, oak forests, Eastern Europe, natural reserve Introduction Documenting biodiversity at the local level is a first step to understand ecological processes, especial- ly those happening at broader spatial and temporal scales. In Europe, the species diversity of fungi is generally well explored in the northern, western and central parts of the continent, thanks to a more than two centuries old mycological research tradition (Kotiranta et al 2009, Langer et al. -
An Annotated Checklist of Rust Fungi (Pucciniales) Occurring in Portugal
DOI 10.12905/0380.sydowia71-2019-0065 Published online 6 June 2019 An annotated checklist of rust fungi (Pucciniales) occurring in Portugal Pedro Talhinhas1,*, Rita Carvalho1, Rui Figueira1,2,3 & Ana Paula Ramos1,4 1 LEAF–Linking Landscape, Environment, Agriculture and Food, Instituto Superior de Agronomia, Universidade de Lisboa, Tapada da Ajuda, 1349-017 Lisboa, Portugal 2 CIBIO/InBio, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Campus Agrário de Vairão, Vairão, Portugal 3 CIBIO/InBio, Centro de Investigação em Biodiversidade e Recursos Genéticos, Laboratório Associado, Instituto Superior de Agronomia, Universidade de Lisboa, Tapada da Ajuda, 1349-017 Lisboa, Portugal 4 LPPVA-Laboratório de Patologia Vegetal “Veríssimo de Almeida”, Instituto Superior de Agronomia, Universidade de Lisboa, Tapada da Ajuda, 1349-017 Lisboa, Portugal *e-mail: [email protected] Talhinhas P., Carvalho R., Figueira R. & Ramos A.P. (2019) An annotated checklist of rust fungi (Pucciniales) occurring in Portugal. – Sydowia 71: 65–84. In this work we have retrieved and analysed data for 2319 occurrences of rust fungi from 246 Pucciniales taxa in Portugal based on 115 publications and our own surveys, totalizing 683 rust taxon-host taxon unique combinations. This list was updated according to current taxonomic framework and georeferenced using the GBIF’s recommended methods. The present checklist includes host names, seasonality, life cycle stage, geographical distribution and comments. A list of rust fungi sorted according to their host plants was also prepared. Altogether, this provides a tool for diagnosis of rust fungi occurring in Portugal (and else- where in Europe), enabling to understand their spatio-temporal dynamics and to point out recent introduction of exotic species, along with situations of potential conservation value. -
Liste 6: Notizbuchartige Auswahlliste Zur Bestimmungsliteratur Für Coelomyceten
Pilzgattungen Europas - Liste 6: Notizbuchartige Auswahlliste zur Bestimmungsliteratur für Coelomyceten Bernhard Oertel INRES Universität Bonn Auf dem Hügel 6 D-53121 Bonn E-mail: [email protected] 24.06.2011 Zu den Abbildungsangaben in dieser Datei: Darstellungen von Coelomyceten, wie sie draußen in der Natur anzutreffen sind, sind eher rar, daher wurden auch hier einige Abbildungswerke zitiert. Solche Standort-Darstellungen finden sich z.B. in Migula, Kryptogamen-Flora von Deutschland, Deutsch-Österreich und der Schweiz, Fungi Imperfecti, Bd. 4/1 1921 und Bd. 4/2 1934 (s. im Internet bei Biblioteca digital del Real Jardin Botanico Madrid, dort jedoch nur Band 4/1 eingescant) und in Saccardo (1877-1886), Fungi Italici Autographice Delineati (s. im Internet bei Cyberliber). Weitere Abbildungen finden sich meist auch in den angegebenen Literaturstellen, die in den Rubriken "Bestimm. d. Gatt." und "Lit." aufgelistet sind. Asco- und Basidiomycota-Phylogenie und der Fall der imperfekten Rostpilze Coelomyceten-Gattungen können ihren phylogenetischen Anschluss sowohl bei den Basidiomycota als auch bei den Ascomycota haben. Beide phylogenetische Gruppen sind hier gleichrangig und alfabetisch vermischt abgehandelt. In der Konsequenz sind auch die imperfekten Pilze mit Rostpilz-Phylogenie in jedem Fall aus den Dateien und Abhandlungen der perfekten Pilze herauszunehmen und in denen der imperfekten Pilze (Deuteromyceten) unterzubringen. Diese imperfekten Roste werden hier in der Coelomyceten-Datei abgehandelt, ungeachtet der Frage, ob sie formal den Hypho- od. Coelomyceten zugeordnet werden müssen; dies sind z.B. die Formgattungen Aecidium, Caeoma, Kunkelia, Lecythea, Milesia, Peridermium, Pomatomyces, Roestelia, Uredo und Wardia. Die imperfekten Brandpilze gehören generell den Hypho- oder Blastomyceten an und finden sich entsprechend in der Hyphomyceten-Datei. -
Ips East Zone Meet Cum National Symposium ·2017
IPS EAST ZONE MEET CUM NATIONAL SYMPOSIUM ·2017 "CHALLENGES AND PERSPECTIVE IN PLANT HEALTH MANAGEMENT UNDER CLIMATE CHANGE SCENARIO" Nf.'TI~~IIJI~ll2:1-24. 2.)17 Farmers' Academy and Convention Centre (Lake Hall), BCKV, Kalyani, Nadia, West Bengal, India Indian Phytopathological Society East Zone Meet cum National Symposium - 2017 on Challenges and Perspective in Plant Health Management under Climate Change Scenario 23rd and 24th November, 2017 ABSTRACT CUM SOUVENIR Organised by Department of Plant Pathology Bidhan Chandra Krishi Viswavidyalaya (BCKV) Mohanpur- 741252, Nadia, West Bengal and Indian Phytopathological Society Division of Plant Pathology Indian Agriculture Research Institute New Delhi- 110012, India Abstract cum Souvenir Indian Phytopathological Society East Zone Meet cum National Symposium – 2017 on “Challenges and Perspective in Plant Health Management under Climate Change Scenario” Organised by: Department of Plant Pathology Bidhan Chandra Krishi Viswavidyalaya (BCKV) Mohanpur- 741252, Nadia, West Bengal and Indian Phytopathological Society Division of Plant Pathology Indian Agriculture Research Institute New Delhi- 110012, India Compiled & Edited by: S.Das, A.Basu, P.S.Nath, S.Dutta, S.Jash, A.RoyBarman, R.Mondal, S.Mahapatra, A.K.Ghorai, U. B. Oraon and P.Sarker Published by: Department of Plant Pathology Bidhan Chandra Krishi Viswavidyalaya (BCKV), Mohanpur- 741252, Nadia, West Bengal Date of publication: Kalyani, The 23rd November, 2017 Opinions in these publications are those of the authors and not the Department of Plant Pathology or the Society Printed at: Bishnupriya Printers, Shop No. 70 2 No. Market, Kalyani, Nadia PREFACE At the heart of the sustainable development goals are targets to end hunger, achieve food security, and improve nutrition.