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[Oceanography and Marine Biology - an Annual Review] R. N
OCEANOGRAPHY and MARINE BIOLOGY AN ANNUAL REVIEW Volume 44 7044_C000.fm Page ii Tuesday, April 25, 2006 1:51 PM OCEANOGRAPHY and MARINE BIOLOGY AN ANNUAL REVIEW Volume 44 Editors R.N. Gibson Scottish Association for Marine Science The Dunstaffnage Marine Laboratory Oban, Argyll, Scotland [email protected] R.J.A. Atkinson University Marine Biology Station Millport University of London Isle of Cumbrae, Scotland [email protected] J.D.M. Gordon Scottish Association for Marine Science The Dunstaffnage Marine Laboratory Oban, Argyll, Scotland [email protected] Founded by Harold Barnes Boca Raton London New York CRC is an imprint of the Taylor & Francis Group, an informa business CRC Press Taylor & Francis Group 6000 Broken Sound Parkway NW, Suite 300 Boca Raton, FL 33487-2742 © 2006 by R.N. Gibson, R.J.A. Atkinson and J.D.M. Gordon CRC Press is an imprint of Taylor & Francis Group, an Informa business No claim to original U.S. Government works Printed in the United States of America on acid-free paper 10 9 8 7 6 5 4 3 2 1 International Standard Book Number-10: 0-8493-7044-2 (Hardcover) International Standard Book Number-13: 978-0-8493-7044-1 (Hardcover) International Standard Serial Number: 0078-3218 This book contains information obtained from authentic and highly regarded sources. Reprinted material is quoted with permission, and sources are indicated. A wide variety of references are listed. Reasonable efforts have been made to publish reliable data and information, but the author and the publisher cannot assume responsibility for the valid- ity of all materials or for the consequences of their use. -
Sipuncula: an Emerging Model of Spiralian Development and Evolution MICHAEL J
Int. J. Dev. Biol. 58: 485-499 (2014) doi: 10.1387/ijdb.140095mb www.intjdevbiol.com Sipuncula: an emerging model of spiralian development and evolution MICHAEL J. BOYLE1 and MARY E. RICE2 1Smithsonian Tropical Research Institute (STRI), Panama, Republic of Panama and 2Smithsonian Marine Station at Fort Pierce (SMSFP), Florida, USA ABSTRACT Sipuncula is an ancient clade of unsegmented marine worms that develop through a conserved pattern of unequal quartet spiral cleavage. They exhibit putative character modifications, including conspicuously large first-quartet micromeres and prototroch cells, postoral metatroch with exclusive locomotory function, paired retractor muscles and terminal organ system, and a U-shaped digestive architecture with left-right asymmetric development. Four developmental life history patterns are recognized, and they have evolved a unique metazoan larval type, the pelagosphera. When compared with other quartet spiral-cleaving models, sipunculan development is understud- ied, challenging and typically absent from evolutionary interpretations of spiralian larval and adult body plan diversity. If spiral cleavage is appropriately viewed as a flexible character complex, then understudied clades and characters should be investigated. We are pursuing sipunculan models for modern molecular, genetic and cellular research on evolution of spiralian development. Protocols for whole mount gene expression studies are established in four species. Molecular labeling and confocal imaging techniques are operative from embryogenesis through larval development. Next- generation sequencing of developmental transcriptomes has been completed for two species with highly contrasting life history patterns, Phascolion cryptum (direct development) and Nephasoma pellucidum (indirect planktotrophy). Looking forward, we will attempt intracellular lineage tracing and fate-mapping studies in a proposed model sipunculan, Themiste lageniformis. -
Fauna of Australia 4A Phylum Sipuncula
FAUNA of AUSTRALIA Volume 4A POLYCHAETES & ALLIES The Southern Synthesis 5. PHYLUM SIPUNCULA STANLEY J. EDMONDS (Deceased 16 July 1995) © Commonwealth of Australia 2000. All material CC-BY unless otherwise stated. At night, Eunice Aphroditois emerges from its burrow to feed. Photo by Roger Steene DEFINITION AND GENERAL DESCRIPTION The Sipuncula is a group of soft-bodied, unsegmented, coelomate, worm-like marine invertebrates (Fig. 5.1; Pls 12.1–12.4). The body consists of a muscular trunk and an anteriorly placed, more slender introvert (Fig. 5.2), which bears the mouth at the anterior extremity of an introvert and a long, recurved, spirally wound alimentary canal lies within the spacious body cavity or coelom. The anus lies dorsally, usually on the anterior surface of the trunk near the base of the introvert. Tentacles either surround, or are associated with the mouth. Chaetae or bristles are absent. Two nephridia are present, occasionally only one. The nervous system, although unsegmented, is annelidan-like, consisting of a long ventral nerve cord and an anteriorly placed brain. The sexes are separate, fertilisation is external and cleavage of the zygote is spiral. The larva is a free-swimming trochophore. They are known commonly as peanut worms. AB D 40 mm 10 mm 5 mm C E 5 mm 5 mm Figure 5.1 External appearance of Australian sipunculans. A, SIPUNCULUS ROBUSTUS (Sipunculidae); B, GOLFINGIA VULGARIS HERDMANI (Golfingiidae); C, THEMISTE VARIOSPINOSA (Themistidae); D, PHASCOLOSOMA ANNULATUM (Phascolosomatidae); E, ASPIDOSIPHON LAEVIS (Aspidosiphonidae). (A, B, D, from Edmonds 1982; C, E, from Edmonds 1980) 2 Sipunculans live in burrows, tubes and protected places. -
10. Sipuncula
10. SIPUNCULA MARY E. RICE Smithsonian Marine Station at Link Port, 5612 Old Dixie Highway, Fort Pierce, Florida 34946, U.S.A. JOHN F. PILGER Department of Biology, Agnes Scott College, Decatur, Georgia 30030, U.S.A. I. INTRODUCTION Studies of development in sipunculans were first published in the latter part of the 19th century, but it has been only recently that reproductive cycles have been investigated and that sufficient comparative information has become available for any understanding of the trends and diversity of developmental patterns. In addition to their more usual means of sexual reproduction, a few sipunculans have been found to use different modes of asexual reproduction. Processes of transverse fission and budding have been described by Rajulu and Krishnan (1969), Rice (1970), and Rajulu (1975). Also, an interesting example of parthenogenesis has been discovered and is under current study (Pilger, 1987, 1989). A number of descriptive studies have been made on breeding cycles of sipun- culans; however, there have been no interpretive analyses or experimental consider- ations of controlling mechanisms. In connection with these studies a few incidental observations have been reported on fecundity. Major references on reproductive cycles are those of Gonse (1956a, b). Rice (1975a), and Gibbs (1975, 1976). II. ASEXUAL PROPAGATION AND REGENERATION Although sexual reproduction is the common mode of propagation among sipuncu- lans, asexual reproduction has been reported to occur in two species, Aspidosiphon brocki and Sipunculus robustus (Rice, 1970 and Rajulu and Krishnan, 1969 re- spectively). In the former it occurs as a type of transverse fission and in the latter as either budding or transverse fission. -
Musculature in Sipunculan Worms: Ontogeny and Ancestral States
EVOLUTION & DEVELOPMENT 11:1, 97–108 (2009) DOI: 10.1111/j.1525-142X.2008.00306.x Musculature in sipunculan worms: ontogeny and ancestral states Anja Schulzeà and Mary E. Rice Smithsonian Marine Station, 701 Seaway Drive, Fort Pierce, FL 34949, USA ÃAuthor for correspondence (email: [email protected]). Present address: Department of Marine Biology, Texas A & M University at Galveston, 5007 Avenue U, Galveston, TX 77551, USA. SUMMARY Molecular phylogenetics suggests that the introvert retractor muscles as adults, go through devel- Sipuncula fall into the Annelida, although they are mor- opmental stages with four retractor muscles that are phologically very distinct and lack segmentation. To under- eventually reduced to a lower number in the adult. The stand the evolutionary transformations from the annelid to the circular and sometimes the longitudinal body wall musculature sipunculan body plan, it is important to reconstruct the are split into bands that later transform into a smooth sheath. ancestral states within the respective clades at all life history Our ancestral state reconstructions suggest with nearly 100% stages. Here we reconstruct the ancestral states for the head/ probability that the ancestral sipunculan had four introvert introvert retractor muscles and the body wall musculature in retractor muscles, longitudinal body wall musculature in bands the Sipuncula using Bayesian statistics. In addition, we and circular body wall musculature arranged as a smooth describe the ontogenetic transformations of the two muscle sheath. Species with crawling larvae have more strongly systems in four sipunculan species with different de- developed body wall musculature than those with swimming velopmental modes, using F-actin staining with fluo- larvae. -
Bulletin of the British Museum (Natural History)
A classification of the phylum Sipuncula Peter E. Gibbs Marine Biological Association of the U.K., Plymouth, Devon PL1 2PB, U.K. Edward B. Cutler Division of Science and Mathematics, Utica College of Syracuse University, Utica, New York 13502, U.S.A. Synopsis A classification of the phylum Sipuncula is adopted following the analysis of Cutler & Gibbs (1985) and comprises two classes, four orders and six families. This replaces the earlier classification of Stephen & Edmonds (1972) which was based on four families only. The diagnostic characters are reviewed. Seventeen genera are redefined, one new subgenus is described and twelve other subgenera are recognised. Introduction The classification of the phylum Sipuncula has had a confused history. Early attempts to define higher taxa by grouping genera were, to a large extent, thwarted by incomplete, imprecise or erroneous descriptions of many species. Stephen & Edmonds (1972) classified the phylum into four families in providing the first compilation of species described prior to about 1970. How- ever, this monograph is essentially literature-based and consequently many errors are repeated; nevertheless, it provides a useful base-line to the present revision. The need for greater precision in defining genera has led the authors to re-examine most of the available type specimens. The definitions of genera presented below incorporate both novel observations and corrections to earlier descriptions. Where possible, nine basic characters have been checked for each species before assigning it to a genus. These characters are summarised for each genus in Table 1 . A phylogenetic interpretation of the classification used here will be found in Cutler & Gibbs (1985). -
The Molecular and Developmental Biologisk Basis of Bodyplan Patterning in Institut Sipuncula and the Evolution Of
1 THE MOLECULAR AND DEVELOPMENTAL BIOLOGISK BASIS OF BODYPLAN PATTERNING IN INSTITUT SIPUNCULA AND THE EVOLUTION OF SEGMENTATION Alen Kristof | Københavns Universitet 2 DEPARTMENT OF BIOLOGY FACULTY OF SCIENCE UNIVERSITY OF COPENHAGEN PhD thesis Alen Kristof The molecular and developmental basis of bodyplan patterning in Sipuncula and the evolution of segmentation Principal supervisor Associate Prof. Dr. Andreas Wanninger Co-supervisor Prof. Dr. Pedro Martinez, University of Barcelona April, 2011 3 Reviewed by: Assistant Professor Anja Schulze Department of Marine Biology, Texas A&M University at Galveston Galveston, USA Professor Stefan Richter Department of Biological Sciences, University of Rostock Rostock, Germany Faculty opponent: Associate Professor Danny Eibye-Jacobsen Natural History Museum of Denmark, University of Denmark Copenhagen, Denmark ______________________________________________________________ Cover illustration: Front: Frontal view of an adult specimen of the sipunculan Themiste pyroides with a total length of 13 cm. Back: Confocal laserscanning micrograph of a Phascolosoma agassizii pelagosphera larva showing its musculature. Lateral view. Age of the specimen is 15 days and its total size approximately 300 µm in length. 4 “In a world that keeps on pushin’ me around, but I’ll stand my ground, and I won’t back down.” Thomas Earl Petty, 1989 5 Preface Preface The content of this dissertation comprises three years of research at the University of Copenhagen from May 1, 2008 to April 30, 2011. The PhD project on the development of Sipuncula was mainly carried out in the Research Group for Comparative Zoology, Department of Biology, University of Copenhagen under the supervision of Assoc. Prof. Dr. Andreas Wanninger. I spent nine months working on body patterning genes in the lab of Prof. -
Distribution of Sipuncula in Relation to the Environmental Characteristics at Selected Sites in Kuching Division, Sarawak
DISTRIBUTION OF SIPUNCULA IN RELATION TO THE ENVIRONMENTAL CHARACTERISTICS AT SELECTED SITES IN KUCHING DIVISION, SARAWAK. Nurnadirah Bt Ibrahim (38150) Bachelor of Science with Honours (Aquatic Resource Science and Management) 2015 Distribution of Sipuncula in relation to the Environmental Characteristics at Selected Sites in Kuching Division, Sarawak Nurnadirah Binti Ibrahim (38150) This report is submitted in partial fulfillment of the Final Year Project 2 (STF 3015) Faculty of Resource Science and Technology UNIVERSITI MALAYSIA SARAWAK 2015 Acknowledgement Alhamdulillah, praises to Allah for His blessing in completing this thesis. Special gratitude goes to my supervisor, Dr Siti Akmar Khadijah, for her supervision and support. Her priceless comments, suggestion and support throughout the experimental and thesis work have contributed to the triumph of this research. Sincere thanks to my roommates, course mate and my friend for their kindness and moral support during my studies. Besides, large appreciation to the master students Mr Norhakimi Muhammad for the helping throughout this project. My deepest appreciation goes to my beloved family for their support, prayers as well as encouragement. They are my inspiration to move forward through the challenges. My appreciation also goes to all the laboratory assistant who help me during the field work as well as in the laboratory. For those who indirectly help me, your kind-heartedness means a lot for me. Thank you. i DECLARATION I hereby declare that no portion of this dissertation has been -
Sipuncula (Peanut Worms) from Bocas Del Toro, Panama
Caribbean Journal of Science, Vol. 41, No. 3, 523-527, 2005 Copyright 2005 College of Arts and Sciences University of Puerto Rico, Mayagu¨ez Sipuncula (Peanut Worms) from Bocas del Toro, Panama ANJA SCHULZE Smithsonian Marine Station, 701 Seaway Drive, Fort Pierce, FL 34949; [email protected] or [email protected] ABSTRACT.—In a survey of sipunculan diversity in the Bocas del Toro (Panama) region, sipunculans were collected from 10 stations, ranging in depth from intertidal to 37 m. Nineteen species of adult sipunculans were collected. In addition, two types of pelagic sipunculan larvae were retrieved from plankton tows. Thirteen of the adult sipunculan species were inhabitants of hard substrate, either in crevices or burrowing into rocks. These included representatives of the genera Antillesoma, Aspidosiphon, Golfingia, Nephasoma, Phascolosoma, Phascolion and Themiste. An unidentified Phascolion, an unidentified Aspidosiphon and Antillesoma antillarum (the latter usually an inhabitant of rock crevices) were retrieved from gastropod shells. Sipunculidae sp., Sipunculus sp., Phascolion sp. and Nephasoma cf. eremita were recovered by trawl- ing in soft mud. While the hard-substrate sipunculans are all well-known and widely distributed species, three of the four soft-substrate inhabitants were morphologically unusual and/or unexpected in tropical waters. KEYWORDS.—Peanut worms, invertebrate, Caribbean, larvae, pelagosphera, diversity INTRODUCTION burrows in coral or other rocks and in a variety of abandoned mollusc shells, Sipuncula (common name: peanut worms) polychaete tubes and foraminiferan tests are exclusively marine worm-like animals. (Cutler 1994). One species has been re- The body consists of an unsegmented trunk ported from decaying whale bones (Gibbs and a retractable introvert, usually with an 1987). -
Guide to the MEDITERRANEAN SIPUNCULANS
Guide to the MEDITERRANEAN SIPUNCULANS Introduction Sipunculans, commonly known as peanut worms, are a group of exclusively marine benthic organisms. They are protostome, coe- lomate, unsegmented bilaterally symmetric invertebrates. Since the mid-twentieth century Sipuncula was considered an independ- ent phylum (Hyman 1959; Stephen 1964; Clark 1969; Stephen & Edmonds 1972), but nowadays this status is unclear and recent genetic studies would place the group within the phylum Annelida in a clade yet to be determined (e.g. Struck et al. 2007, 2011; Dordel et al. 2010). Sipunculans are likely to be placed in their own class in Annelida due to their distinctive features; e.g. lack of segmentation, U-shaped digestive tube and a sipunculan-specific larva (pelagosphera). From this perspective, in the present work no particular taxonomic rank has been assigned them. Nowadays, the sipunculans remain a group of little known and scarcely studied animals. This is mainly due to a lack of specialists (no more than 20 worldwide) and difficulties in species identifi- cation, since a detailed dissection is often required to clarify the details of their internal anatomy. Dissection is a difficult technique that requires skills and training, since most of the specimens are just a few mm in length. Moreover there is a lack of specific teach- ing materials. Although a few monographs aid in identification (Saiz-Salinas 1993; Cutler 1994; Pancucci-Papadopoulou et al. 1999), the information included is insufficiently illustrated, which is always a major problem. There are thus large gaps in the knowl- edge of this taxon. Unfortunately, most sipunculans collected in macrobenthic studies are not identified further than Phylum level, except for a few common species. -
Trophic Cascade Modelling in Bathyal Ecosystems
Doctoral Thesis Trophic cascade modelling in bathyal ecosystems Author: Supervisor: Valeria Mamouridis Dr. Francesc Maynou A thesis submitted in fulfilment of the requirements for the degree of Doctor of Philosophy in the Bio-Economic Modelling Research Group Dept. de Recursos Marins Renovables (ICM-CSIC) and the Dept. de Ingenier´ıa Hidr´aulica, Mar´ıtima y Ambiental (EHMA-UPC) February 2015 Declaration of Authorship I, Valeria Mamouridis , declare that this thesis titled, ’Trophic cascade modelling in bathyal ecosystems’ and the work presented in it are my own. I confirm that: ∎ This work was done wholly or mainly while in candidature for a research degree at this University. ∎ Where any part of this thesis has previously been submitted for a degree or any other qualification at this University or any other institution, this has been clearly stated. ∎ Where I have consulted the published work of others, this is always clearly attributed. ∎ Where I have quoted from the work of others, the source is always given. With the exception of such quotations, this thesis is entirely my own work. ∎ I have acknowledged all main sources of help. ∎ Where the thesis is based on work done by myself jointly with others, I have made clear exactly what was done by others and what I have contributed myself. Signed: Date: iii INSTITUT DE CI ENCIES` DEL MAR (CSIC) UNIVERSITAT POLIT ECNICA` DE CATALUNYA Abstract Dept. de Ingenier´ıa Hidr´aulica, Mar´ıtima y Ambiental (EHMA-UPC) Dept. de Recursos Marins Renovables (ICM-CSIC) Doctor of Philosophy Trophic Cascade Modelling in Bathyal Ecosystems by Valeria Mamouridis In this Ph.D. -
And Post Construction Sampling of Artificial FDOT Rock- Pile Reefs in Broward County, Florida Joan Lorraine Guerra Nova Southeastern University, [email protected]
Nova Southeastern University NSUWorks HCNSO Student Theses and Dissertations HCNSO Student Work 12-10-2015 A Comparison of Infaunal Community Structure Between Pre- and Post Construction Sampling of Artificial FDOT Rock- Pile Reefs in Broward County, Florida Joan Lorraine Guerra Nova Southeastern University, [email protected] Follow this and additional works at: https://nsuworks.nova.edu/occ_stuetd Part of the Marine Biology Commons, and the Oceanography and Atmospheric Sciences and Meteorology Commons Share Feedback About This Item NSUWorks Citation Joan Lorraine Guerra. 2015. A Comparison of Infaunal Community Structure Between Pre- and Post Construction Sampling of Artificial FDOT Rock- Pile Reefs in Broward County, Florida. Master's thesis. Nova Southeastern University. Retrieved from NSUWorks, . (399) https://nsuworks.nova.edu/occ_stuetd/399. This Thesis is brought to you by the HCNSO Student Work at NSUWorks. It has been accepted for inclusion in HCNSO Student Theses and Dissertations by an authorized administrator of NSUWorks. For more information, please contact [email protected]. NOVA SOUTHEASTERN UNIVERSITY OCEANOGRAPHIC CENTER A Comparison of Infaunal Community Structure Between Pre- and Post-Construction Sampling of Artificial FDOT Rock- Pile Reefs in Broward County, Florida By Joan Lorraine Guerra Submitted to the Faculty of Nova Southeastern University Oceanographic Center in partial fulfillment of the requirements for the degree of Master of Science with a specialty in: MARINE BIOLOGY Nova Southeastern University December 2015 1 Thesis of Joan Lorraine Guerra Submitted in Partial Fulfillment of the Requirements for the Degree of Marine Biology Masters of Science: Marine Biology Nova Southeastern University Oceanographic Center December 2015 Approved: Thesis Committee Major Professor: _______________________________________________ Dr.