Neuromuscular Function in Plant Parasitic Nematodes: a Target for Novel Control Strategies? M
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Diversity, Phylogeny, Characterization and Diagnostics of Root-Knot and Lesion Nematodes
Diversity, phylogeny, characterization and diagnostics of root-knot and lesion nematodes Toon Janssen Promotors: Prof. Dr. Wim Bert Prof. Dr. Gerrit Karssen Thesis submitted to obtain the degree of doctor in Sciences, Biology Proefschrift voorgelegd tot het bekomen van de graad van doctor in de Wetenschappen, Biologie 1 Table of contents Acknowledgements Chapter 1: general introduction 1 Organisms under study: plant-parasitic nematodes .................................................... 11 1.1 Pratylenchus: root-lesion nematodes ..................................................................................... 13 1.2 Meloidogyne: root-knot nematodes ....................................................................................... 15 2 Economic importance ..................................................................................................... 17 3 Identification of plant-parasitic nematodes .................................................................. 19 4 Variability in reproduction strategies and genome evolution ..................................... 22 5 Aims .................................................................................................................................. 24 6 Outline of this study ........................................................................................................ 25 Chapter 2: Mitochondrial coding genome analysis of tropical root-knot nematodes (Meloidogyne) supports haplotype based diagnostics and reveals evidence of recent reticulate evolution. 1 Abstract -
433 Among Other Nematodes, Root-Knot Specimens Were Collected from Wheat Ro.Ots Var. Capeiti, C38290. They Were Identified As M
SHORT COMMUNICATIONS 433 Among other nematodes, root-knot specimens were collected from wheat ro.ots var. Capeiti, C38290. They were identified as M. artiellia Franklin, 1961. This root-knot nematode was first reported and described from England on cabbage grown in sandy loam in Norfolk. Other hosts noted by Franklin are oats, barley, wheat, kale, lucerne, pea, ciover and broad bean. All stages off the nematode were found. Second stage larvae were collected from soil samples and from egg masses. Males were found partly or completely within root tissue producing small knots of abnormal, dark coloured cells (Fig. 3), and were .often seen near or around the partly embedded females. The mature females were flask or pear-shaped with neck tapering t.o a small head, and smooth, rounded posterior part with terminal vulva and annulated region around the tail. The perineal patterns were similar to those described by Franklin (1961) and Whitehead (1968) for artiellia (Figs. 1, 2). Measurements. 5 Q Q: L = 640 p (611-675); width = 432 JL (357-458), dorsal oesophageal gland orifice 4.6 a behind stylet base; vulva = 21 p (20-22). Stylet = 14.3 JL. 10 eggs = 95 JL (90-99) X 40 p (40-40.3). 8 8 : L = 872-1090 ,u; width = 27.25-30.6 p. a = 32.3-35; b = 11-14.3; c = 80-83; stylet = 21.8-23.2 it; spicules 25-27 ,a; dorsal oesophageal gland orifice 5.2 p behind stylet base. Many mature females were found only partly embedded in the root and covered completely by the gelatinous sac even before the eggs are laid. -
Journal of Nematology Volume 48 March 2016 Number 1
JOURNAL OF NEMATOLOGY VOLUME 48 MARCH 2016 NUMBER 1 Journal of Nematology 48(1):1–6. 2016. Ó The Society of Nematologists 2016. Occurrence of Panagrellus (Rhabditida: Panagrolaimidae) Nematodes in a Morphologically Aberrant Adult Specimen of Rhynchophorus ferrugineus (Coleoptera: Dryophthoridae) 1 1 2* 1 1 1 MANUELA CAMEROTA, GIUSEPPE MAZZA, LYNN K. CARTA, FRANCESCO PAOLI, GIULIA TORRINI, CLAUDIA BENVENUTI, 1 1 1 BEATRICE CARLETTI, VALERIA FRANCARDI, AND PIO FEDERICO ROVERSI Abstract: An aberrant specimen of Rhynchophorus ferrugineus (Coleoptera: Dryophthoridae) also known as red palm weevil (RPW), the most economically important insect pest of palms in the world, was found among a batch of conspecifics reared for research purposes. A morphological analysis of this weevil revealed the presence of nematodes associated with a structured cuticle defect of the thorax. These nematodes were not able to be cultured, but were characterized by molecular analysis using 28S and 18S ribosomal DNA and shown to belong to the family Panagrolaimidae (Rhabditida), within a clade of Panagrellus. While most nematodes in the insect were juveniles, a single male adult was partially characterized by light microscopy. Morphometrics showed similarities to a species described from Germany. Excluding the entomopathogenic nematodes (EPN), only five other genera of entomophilic or saprophytic rhabditid nematodes are associated with this weevil. This is the first report of panagrolaimid nematodes associated with this invasive pest. Possible mechanisms of nematode-insect association are discussed. Key words: insect thorax defect, invasive species, nematode phoresy, physiological ecology, saprophagous nematode, sour paste nematode. Rhynchophorus ferrugineus, the RPW, is currently con- with RPW, and consider their possible effects as bio- sidered as the most damaging pest of palm species in control agents (Mazza et al., 2014). -
Entomopathogenic Nematodes 37
UCLA UCLA Electronic Theses and Dissertations Title Investigating the Neural Circuit for Carbon Dioxide Avoidance Behavior in Caenorhabditis elegans Permalink https://escholarship.org/uc/item/70m1v28x Author Carrillo, Mayra Publication Date 2015 Peer reviewed|Thesis/dissertation eScholarship.org Powered by the California Digital Library University of California UNIVERSITY OF CALIFORNIA Los Angeles Investigating the Neural Circuit for Carbon Dioxide Avoidance Behavior in Caenorhabditis elegans A dissertation submitted in partial satisfaction of the requirements for the degree of Doctor of Philosophy in Microbiology, Immunology, and Molecular Genetics by Mayra Alejandra Carrillo 2015 ABSTRACT OF THE DISSERTATION Investigating the Neural Circuit for Carbon Dioxide Avoidance Behavior in Caenorhabditis elegans by Mayra Alejandra Carrillo Doctor of Philosophy in Microbiology, Immunology, and Molecular Genetics University of California, Los Angeles, 2015 Professor Elissa A. Hallem, Chair Carbon dioxide (CO2) is a byproduct of oxidative metabolism that can be sensed by different species including mammals, insects, and nematodes and can lead to both physiological and behavioral responses. In the free-living nematode Caenorhabditis elegans the behavioral response can be either avoidance or neutral to CO2, indicating that the behavior is flexible. In this thesis, I investigated the neural basis of behavioral flexibility. We found that the CO2 circuit can be modulated by diverse sensory neurons that respond to ambient oxygen (O2), temperature, and food odor. Additionally, we identified two interneurons downstream of the CO2- sensing BAG neurons, AIY and RIG, that have opposing roles in CO2-evoked responses. A decrease in AIY activity and an increase in RIG activity promote appropriate avoidance behavior to CO2 levels. -
STUDIES on the COPULATORY BEHAVIOUR of the FREE-LIVING NEMATODE PANAGRELLUS REDIVIVUS (GOODEY, 1945). by C.L. DUGGAL M.Sc. (Hons
STUDIES ON THE COPULATORY BEHAVIOUR OF THE FREE-LIVING NEMATODE PANAGRELLUS REDIVIVUS (GOODEY, 1945). by C.L. DUGGAL M.Sc. (Hons. School) Panjab University A thesis submitted for the degree of Doctor of Philosophy in the University of London Imperial College Field Station, Ashurst Lodge, Sunninghill, Ascot, Berkshire. September 1977 2 AtSTRACT The copulatory behaviour of Panagrellus redivivus is described in detail and an attempt is made to relate copulation with the age and reproductive state of the nematodes. Male P. redivivus show both pre- and post-insemination coiling around the female and they use their spicules for probing and for opening the female gonopore. Morphological studies on the spicules have been made at both the light microscope level and the scanning electron microscope level in order to understand their functional importance during copulation. The process of insemination has been studied in some detail and the morphological changes occurring in the sperm during their migration from the seminal vesicle to the seminal receptacle have been recorded. It was found that during migration the sperm formed long chains by attaching themselves anterio-posteriorly, each sperm producing pseudopodial-like projections. The frequency of copulation in the male nematodes and its influence on the number of sperm produced and on the nematode life- span was examined, and compared with the development and longevity of aging virgin males. The number of sperm shed into the uterus of the female at the time of copulation was found to increase with increasing intervals between copulations. Similar observations were also made on the life-span and oocyte production in copulated and virgin females. -
Diagnostic Methods for Identification of Root-Knot Nematodes Species from Brazil
Ciência Rural, Santa Maria,Diagnostic v.48: methods 02, e20170449, for identification 2018 of root-knot nematodes specieshttp://dx.doi.org/10.1590/0103-8478cr20170449 from Brazil. 1 ISSNe 1678-4596 CROP PROTECTION Diagnostic methods for identification of root-knot nematodes species from Brazil Tiago Garcia da Cunha1 Liliane Evangelista Visôtto2* Everaldo Antônio Lopes1 Claúdio Marcelo Gonçalves Oliveira3 Pedro Ivo Vieira Good God1 1Instituto de Ciências Agrárias, Universidade Federal de Viçosa (UFV), Campus Rio Paranaíba, Rio Paranaíba, MG, Brasil. 2Instituto de Ciências Biológicas e da Saúde, Universidade Federal de Viçosa (UFV), Campus Rio Paranaíba, 38810-000, Rio Paranaíba, MG, Brasil. E-mail: [email protected]. *Corresponding author. 3Instituto Biológico, Campinas, SP, Brasil. ABSTRACT: The accurate identification of root-knot nematode (RKN) species (Meloidogyne spp.) is essential for implementing management strategies. Methods based on the morphology of adults, isozymes phenotypes and DNA analysis can be used for the diagnosis of RKN. Traditionally, RKN species are identified by the analysis of the perineal patterns and esterase phenotypes. For both procedures, mature females are required. Over the last few decades, accurate and rapid molecular techniques have been validated for RKN diagnosis, including eggs, juveniles and adults as DNA sources. Here, we emphasized the methods used for diagnosis of RKN, including emerging molecular techniques, focusing on the major species reported in Brazil. Key words: DNA, esterase, Meloidogyne, molecular biology, morphological pattern. Métodos diagnósticos usados na identificação de espécies do nematoide das galhas do Brasil RESUMO: A identificação acurada de espécies do nematoide das galhas (NG) (Meloidogyne spp.) é essencial para a implementação de estratégias de manejo. -
Utilization of Phylogenetic Systematics, Molecular Evolution, and Comparative Transcriptomics to Address Aspects of Nematode and Bacterial Evolution
Brigham Young University BYU ScholarsArchive Theses and Dissertations 2010-06-18 Utilization of Phylogenetic Systematics, Molecular Evolution, and Comparative Transcriptomics to Address Aspects of Nematode and Bacterial Evolution Scott M. Peat Brigham Young University - Provo Follow this and additional works at: https://scholarsarchive.byu.edu/etd Part of the Biology Commons BYU ScholarsArchive Citation Peat, Scott M., "Utilization of Phylogenetic Systematics, Molecular Evolution, and Comparative Transcriptomics to Address Aspects of Nematode and Bacterial Evolution" (2010). Theses and Dissertations. 2535. https://scholarsarchive.byu.edu/etd/2535 This Dissertation is brought to you for free and open access by BYU ScholarsArchive. It has been accepted for inclusion in Theses and Dissertations by an authorized administrator of BYU ScholarsArchive. For more information, please contact [email protected], [email protected]. Utilization of Phylogenetic Systematics, Molecular Evolution, and Comparative Transcriptomics to Address Aspects of Nematode and Bacterial Evolution Scott M. Peat A dissertation submitted to the faculty of Brigham Young University In partial fulfillment of the requirements for the degree of Doctor of Philosophy Byron J. Adams Keith A. Crandall Michael F. Whiting Alan R. Harker George O. Poinar Department of Biology Brigham Young University August 2010 Copyright © 2010 Scott M. Peat All Rights Reserved ABSTRACT Utilization of Phylogenetic Systematics, Molecular Evolution, and Comparative Transcriptomics to Address Aspects of Nematode and Bacterial Evolution Scott M. Peat Department of Biology Doctor of Philosophy Both insect parasitic/entomopathogenic nematodes and plant parasitic nematodes are of great economic importance. Insect parasitic/entomopathogenic nematodes provide an environmentally safe and effective method to control numerous insect pests worldwide. Alternatively, plant parasitic nematodes cause billions of dollars in crop loss worldwide. -
1 Meloidogyne Species - a Diverse Group of Novel and Important Plant Parasites
1 Meloidogyne Species - a Diverse Group of Novel and Important Plant Parasites Maurice Moens1, Roland N. Perry2 and James L. Starr3 1 Institute for Agricultural and Fisheries Research, Merelbeke, Belgium and Ghent University, Ghent, Belgium; 2 Rothamsted Research, Harpenden, Hertfordshire, UK and Ghent University, Ghent, Belgium; 3 Texas A&M University, College Station, Texas, USA 1.1 Introduction I 1.2 Impact 2 1.3 History of the Genus 2 1.4 Current Trends in Species Identification 2 1.5 Life Cycle 3 1.6 Diversity in Biology 6 1.7 Major and Emerging Species 8 1.8 Interactions with Other Plant Pathogens 11 1.9 Management and Control 11 1.10 Conclusions and Future Directions 12 1.11 References 13 1.1 Introduction out showing external symptoms on the harvested products, e.g. symptomless potato tubers. The Root-knot nematodes are members or the genus rapid rate of developmem and reproduction on Meloidogyne (Gbldi, 1892), Meloidogyne is of Greek good hosts results, in the majority or species, in origin and means 'apple-shaped female'. They are several generations during one cropping season, an economically important polyphagous group or leading to severe crop damage. Damage may highly adapted obligate plant parasites, are dis• consist of various degrees of stunting, lack or vig• tributed worldwide and parasitize ncarly every our, and wilting under moisture stress. Secondary species of higher plant. Typically thcy reproduce infection by other pathogens often results in and feed on modified living plant cells within extensive decay of nematode-inlected tissues. The plant roots, where they induce small to large galls common explanation for these above-ground or root-knots, hence their vernacular name. -
The Use of Non–Mammalian Infection Models to Study the Pathogenicity of Members of the Genus Burkholderia and Pseudomonas Aeruginosa
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2012 The use of non-mammalian infection models to study the pathogenicity of Pseudomonas aeruginosa and members of the genus Burkholderia Schwager, S Posted at the Zurich Open Repository and Archive, University of Zurich ZORA URL: https://doi.org/10.5167/uzh-74401 Dissertation Originally published at: Schwager, S. The use of non-mammalian infection models to study the pathogenicity of Pseudomonas aeruginosa and members of the genus Burkholderia. 2012, University of Zurich, Faculty of Science. The Use of Non–Mammalian Infection Models to Study the Pathogenicity of Members of the Genus Burkholderia and Pseudomonas aeruginosa Dissertation zur Erlangung der naturwissenschaftlichen Doktorwürde (Dr. sc. nat.) vorgelegt der Mathematisch-naturwissenschaftlichen Fakultät der Universität Zürich von Stephan Alois Michael Schwager aus Frauenfeld (TG) Promotionskomitee Prof. Dr. Leo Eberl (Vorsitz) Prof. Dr. Kathrin Riedel Prof. Dr. Jakob Pernthaler Zürich, 2012 Meiner Familie Table of Contents I. Summary ..................................................................................................................................... I II. Zusammenfassung ......................................................................................................................III III. Abbreviations ............................................................................................................................. V 1 -
Population Dynamics of Meloidogyne Spp. on Tomato and Cucumber and Biologically-Based Management Strategies
Population dynamics of Meloidogyne spp. on tomato and cucumber and biologically-based management strategies Ariadna Giné Blasco ADVERTIMENT La consulta d’aquesta tesi queda condicionada a l’acceptació de les següents condicions d'ús: La difusió d’aquesta tesi per mitjà del repositori institucional UPCommons (http://upcommons.upc.edu/tesis) i el repositori cooperatiu TDX ( http://www.tdx.cat/) ha estat autoritzada pels titulars dels drets de propietat intel·lectual únicament per a usos privats emmarcats en activitats d’investigació i docència. No s’autoritza la seva reproducció amb finalitats de lucre ni la seva difusió i posada a disposició des d’un lloc aliè al servei UPCommons o TDX.No s’autoritza la presentació del seu contingut en una finestra o marc aliè a UPCommons (framing). Aquesta reserva de drets afecta tant al resum de presentació de la tesi com als seus continguts. En la utilització o cita de parts de la tesi és obligat indicar el nom de la persona autora. ADVERTENCIA La consulta de esta tesis queda condicionada a la aceptación de las siguientes condiciones de uso: La difusión de esta tesis por medio del repositorio institucional UPCommons (http://upcommons.upc.edu/tesis) y el repositorio cooperativo TDR (http://www.tdx.cat/?locale- attribute=es) ha sido autorizada por los titulares de los derechos de propiedad intelectual únicamente para usos privados enmarcados en actividades de investigación y docencia. No se autoriza su reproducción con finalidades de lucro ni su difusión y puesta a disposición desde un sitio ajeno al servicio UPCommons No se autoriza la presentación de su contenido en una ventana o marco ajeno a UPCommons (framing). -
Diversity of Root-Knot Nematodes of the Genus Meloidogyne Göeldi, 1892
RESEARCH ARTICLE Diversity of root-knot nematodes of the genus Meloidogyne Go¨eldi, 1892 (Nematoda: Meloidogynidae) associated with olive plants and environmental cues regarding their distribution in southern Spain Antonio Archidona-Yuste1, Carolina Cantalapiedra-Navarrete1, Gracia Lie´banas2, Hava a1111111111 F. Rapoport1, Pablo Castillo1, Juan E. Palomares-Rius1 a1111111111 a1111111111 1 Instituto de Agricultura Sostenible (IAS), Consejo Superior de Investigaciones Cientı´ficas (CSIC), Avenida Mene´ndez Pidal s/n, Co´rdoba, Spain, 2 Departmento de Biologı´a Animal, Biologı´a Vegetal y Ecologı´a, a1111111111 Universidad de Jae´n, Campus ‘Las Lagunillas’ s/n, Jae´n, Spain a1111111111 * [email protected] Abstract Citation: Archidona-Yuste A, Cantalapiedra- Root-knot nematodes of the genus Meloidogyne are recognised worldwide as a major pro- Navarrete C, Lie´banas G, Rapoport HF, Castillo P, duction constraint in crops of primary economic importance. Knowledge of their diversity Palomares-Rius JE (2018) Diversity of root-knot and prevalence, as well as the major environmental and agronomical cues for understand- nematodes of the genus Meloidogyne Go¨eldi, 1892 (Nematoda: Meloidogynidae) associated with olive ing their distribution in specific areas is of vital importance for designing control measures to plants and environmental cues regarding their reduce significant damage. We provide the first detailed information on the diversity, distri- distribution in southern Spain. PLoS ONE 13(6): bution and levels of Meloidogyne species infecting wild and cultivated olive soils in a wide- e0198236. https://doi.org/10.1371/journal. pone.0198236 region in southern Spain that included 499 sampling sites. Overall Meloidogyne spp. were found in 6.6% of sampled olive plants, with 6.6% and 6.5% for cultivated and wild olive, Editor: Raffaella Balestrini, Institute for Sustainable Plant Protection, C.N.R., ITALY respectively. -
The Last Changes Taxonomy, Phylogeny and Evolution of Plant-Parasitic Nematodes Hamid Abbasi Moghaddam* and Mohammad Salari** *M.Sc
Biological Forum – An International Journal 7(2): 981-992(2015) ISSN No. (Print): 0975-1130 ISSN No. (Online): 2249-3239 The last changes Taxonomy, Phylogeny and Evolution of Plant-parasitic Nematodes Hamid Abbasi Moghaddam* and Mohammad Salari** *M.Sc. Student, Department of Plant Protection, Faculty of Agriculture, University of Zabol, IRAN **Associate Professor, Department of Plant Protection, College of Agriculture, University of Zabol, IRAN (Corresponding author: Hamid Abbasi Moghaddam) (Received 28 August, 2015, Accepted 29 November, 2015) (Published by Research Trend, Website: www.researchtrend.net) ABSTRACT: Nematodes can be identified using several methods, including light microscopy, fatty acid analysis, and PCR analysis. The phylum Nematoda can be seen as a success story. Nematodes are speciose and are present in huge numbers in virtually all marine, freshwater and terrestrial environments. A phylogenetic framework is needed to underpin meaningful comparisons across taxa and to generate hypotheses on the evolutionary origins of important properties and processes. We will outline the backbone of nematode phylogeny and focus on the phylogeny and evolution of plant-parasitic Tylenchomorpha. We will conclude with some recent insights into the relationships within and between two highly successful representatives of the Tylenchomorpha; the genera Pratylenchus and Meloidogyne. In this study, we present last changes taxonomy, phylogeny and evolution of plant-parasitic nematodes. Keywords: Phylogeny, taxonomy, plant-parasitic nematode, evolution comparative anatomy of existing nematodes, trophic INTRODUCTION habits, and by the comparison of nematode DNA Members of the phylum Nematoda (round worms) have sequences (Thomas et al. 1997, Powers et al. 1993). been in existence for an estimated one billion years, Based upon molecular phylogenic analyses, it appears making them one of the most ancient and diverse types that nematodes have evolved their ability to parasitize of animals on earth (Wang et al.