Evaluation and Utilization of Biodiversity in Triticeae for Wheat Lmprovement
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Establishment of a Global Network for the in Situ Conservation of Crop Wild Relatives: Status and Needs
THEMATIC BACKGROUND STUDY Establishment of a Global Network for the In Situ Conservation of Crop Wild Relatives: Status and Needs Nigel Maxted and Shelagh Kell BACKGROUND STUDY PAPER NO. 39 October 2009 COMMISSION ON GENETIC RESOURCES FOR FOOD AND AGRICULTURE ESTABLISHMENT OF A GLOBAL NETWORK FOR THE IN SITU CONSERVATION OF CROP WILD RELATIVES: STATUS AND NEEDS by *By Nigel Maxted and Shelagh Kell The content of this document is entirely the responsibility of the authors, and does not .necessarily represent the views of the FAO, or its Members 2 * School of Biosciences, University of Birmingham. Disclaimer The content of this document is entirely the responsibility of the authors, and does not necessarily represent the views of the Food and Agriculture Organization of the United Nations (FAO), or its Members. The designations employed and the presentation of material do not imply the expression of any opinion whatsoever on the part of FAO concerning legal or development status of any country, territory, city or area or of its authorities or concerning the delimitation of its frontiers or boundaries. The mention of specific companies or products of manufacturers, whether or not these have been patented, does not imply that these have been endorsed by FAO in preference to others of a similar nature that are not mentioned. CONTENTS SUMMARY 6 ACKNOWLEDGEMENTS 7 PART 1: INTRODUCTION 8 1.1 Background and scope 8 1.2 The global and local importance of crop wild relatives 10 1.3 Definition of a crop wild relative 12 1.4 Global numbers of crop -
Interspecific Hybridization Between Durum Wheat and Aegilops Umbellulata (Zhuk.)
713 Bulgarian Journal of Agricultural Science, 18 (No 5) 2012, 713-721 Agricultural Academy INTERSPECIFIC HYBRIDIZATION BETWEEN DURUM WHEAT AND AEGILOPS UMBELLULATA (ZHUK.) B. HADZHIIVANOVA, V. BOZHANOVA and D. DECHEV Field Crops Institute, BG - 6200 Chirpan, Bulgaria Abstract HADZHIIVANOVA, B., V. BOZHANOVA and D. DECHEV, 2012. Interspecific hybridization between durum wheat and Aegilops umbellulata (Zhuk.). Bulg. J. Agric. Sci., 18: 713-721 The possibility for obtaining of interspecific hybrids between three durum wheat genotypes (Triticum durum, 2n = 4x = 28, AABB genomes) and one accession of Aegilops umbellulata (2n = 2x = 18, UU genome) during two different seasons has been studied. A low crossability rate of 3% average for all genotypes over two years was achieved. The observed variation of crossability is due to a greatest extent to the genotype of durum wheat parent with 82.91% from total variation. Hybrid plants were obtained only by means of embryo rescue method. The ability for in vitro regeneration was still independent of crossability of used durum wheat genotypes. All received F1 hybrids plants were identical they exhibited good tillering ability and manifested traits from both parents. In spite of the observed partially fertility in F1 hybrids between durum wheat and Aegilops umbellulata no germination of the hybrid seeds was ascertained. BC1 seeds were obtained from F1 hybrids of hybrid combination Beloslava × Aegilops umbellulata after backcrossing to the durum wheat parent. An increase of crossability with advancing of backcross progenies – from 1.6% in BC1 hybrids to 26.2% in BC2 hybrids has been found. Meiotic abnormalities including dyads and triads at the end of microsporogenesis as well as uninucleate microspores with a different shape and size were observed suggesting production of unreduced gametes in this cross. -
DISSERTAÇÃO José Roseno De Mendonça Filho.Pdf
UNIVERSIDADE FEDERAL DE PERNAMBUCO CENTRO DE BIOCIÊNCIAS DEPARTAMENTO DE GENÉTICA PROGRAMA DE PÓS-GRADUAÇÃO EM CIÊNCIAS BIOLÓGICAS JOSÉ ROSENO DE MENDONÇA FILHO DIVERSIDADE CARIOTÍPICA EM REPRESENTANTES DO COMPLEXO CRYPTANTHOID (BROMELIOIDEAE, BROMELIACEAE) Recife 2019 JOSÉ ROSENO DE MENDONÇA FILHO DIVERSIDADE CARIOTÍPICA EM REPRESENTANTES DO COMPLEXO CRYPTANTHOID (BROMELIOIDEAE, BROMELIACEAE) Dissertação apresentada ao Programa de Pós- Graduação em Ciências Biológicas, Área de Concentração Genética, da Universidade Federal de Pernambuco, como requisito para obtenção do título de mestre em Ciências Biológicas. Orientadora: Profa. Dra. Ana Maria Benko Iseppon Coorientadores: Profa. Dra. Ana Christina Brasileiro-Vidal Prof. Dr Jaílson Gitai dos Santos Frazão Recife 2019 JOSÉ ROSENO DE MENDONÇA FILHO DIVERSIDADE CARIOTÍPICA EM REPRESENTANTES DO COMPLEXO CRYPTANTHOID (BROMELIOIDEAE, BROMELIACEAE) Dissertação apresentada ao Programa de Pós-Graduação em Ciências Biológicas, Área de Concentração Genética, da Universidade Federal de Pernambuco, como requisito para obtenção do título de mestre em Ciências Biológicas. Aprovada em: 23/07/2019 COMISSÃO EXAMINADORA ___________________________________________ Profa. Dra. Ana Maria Benko Iseppon UFPE (Orientadora) ___________________________________________ Profa. Dra. Maria Betânia de Oliveira Melo UFPE (Membro Interno) ____________________________________________ Prof. Dr. Geyner Alves dos Santos Cruz UPE – Campus de Petrolina (Membro Externo) MEMBROS SUPLENTES ____________________________________________ -
Vascular Plant Diversity of the Alanya Castle Walls and Their Ecological Effects
www.biodicon.com Biological Diversity and Conservation ISSN 1308-8084 Online ISSN 1308-5301 Print Research article/Araştırma makalesi 13/1 (2020) 9-18 DOI: 10.46309/biodicon.2020.731423 Vascular plant diversity of the Alanya Castle walls and their ecological effects Ahmet AKSOY 1, Jale ÇELİK *2 ORCID: 0000-0002-9696-7122; 0000-0002-3624-2146 1 University of Akdeniz, Faculty of Science, Department of Biology, Antalya, Turkey 2 University of Akdeniz, Institute of Science and Technology, Department of Biology, Antalya, Turkey Abstract Since historical buildings are living mirrors of the past, it is very important to preserve and transfer them to future generations. In this study, plants growing on the walls of Alanya Castle were identified and the damages that these plants gave to the historical construction and the precautions to be taken to prevent these damages were emphasized. A total of 94 plant taxa, including five pteridophytes, one gymnosperm and 88 angiosperms, belonging to 35 families were identified on the walls of Alanya Castle. Conyza canadensis, Inula heterolepis, Phagnalon graecum, Arabis verna, Mercurialis annua, Fumaria parviflora, Cymbalaria microcalyx, Galium canum subsp. antalyense, Parietaria judaica, Hyoscyamus aureus, Poa bulbosa were the dominant plant species of Alanya Castle walls. Possible seed dispersion of these plants on the castle walls and the methods for controlling them are discussed in detail. We conclude that the most effective method of combating plants that grow naturally on historical buildings and give damage to these buildings is mechanical excavation. Key words: Alanya, biodiversity, mechanical excavation, urban ecosystems, wall flora ---------- ---------- Alanya Kalesi duvarlarının vasküler bitki çeşitliliği ve ekolojik etkileri Özet Tarihi yapılar geçmişin yaşayan aynaları olduklarından, onları korumak ve gelecek nesillere aktarmak çok önemlidir. -
Genotype-By-Sequencing Facilitates Genetic Mapping of a Stem Rust Resistance Locus in Aegilops Umbellulata, a Wild Relative of Cultivated Wheat Erena A
Edae et al. BMC Genomics (2016) 17:1039 DOI 10.1186/s12864-016-3370-2 RESEARCH ARTICLE Open Access Genotype-by-sequencing facilitates genetic mapping of a stem rust resistance locus in Aegilops umbellulata, a wild relative of cultivated wheat Erena A. Edae1*, Pablo D. Olivera2, Yue Jin1,2, Jesse A. Poland3 and Matthew N. Rouse1,2* Abstract Background: Wild relatives of wheat play a significant role in wheat improvement as a source of genetic diversity. Stem rust disease of wheat causes significant yield losses at the global level and stem rust pathogen race TTKSK (Ug99) is virulent to most previously deployed resistance genes. Therefore, the objective of this study was to identify loci conferring resistance to stem rust pathogen races including Ug99 in an Aegilops umbelluata bi-parental mapping population using genotype-by-sequencing (GBS) SNP markers. Results: A bi-parental F2:3 population derived from a cross made between stem rust resistant accession PI 298905 and stem rust susceptible accession PI 542369 was used for this study. F2 individuals were evaluated with stem rust race TTTTF followed by testing F2:3 families with races TTTTF and TTKSK. The segregation pattern of resistance to both stem rust races suggested the presence of one resistance gene. A genetic linkage map, comprised 1,933 SNP markers, was created for all seven chromosomes of Ae. umbellulata using GBS. A major stem rust resistance QTL that explained 80% and 52% of the phenotypic variations for TTTTF and TTKSK, respectively, was detected on chromosome 2U of Ae. umbellulata. Conclusion: The novel resistance gene for stem rust identified in this study can be transferred to commercial wheat varieties assisted by the tightly linked markers identified here. -
RNA-Seq Analysis Reveals Considerable Genetic Diversity And
Okada et al. BMC Plant Biology (2018) 18:271 https://doi.org/10.1186/s12870-018-1498-8 RESEARCH ARTICLE Open Access RNA-seq analysis reveals considerable genetic diversity and provides genetic markers saturating all chromosomes in the diploid wild wheat relative Aegilops umbellulata Moeko Okada1,KentaroYoshida1* , Ryo Nishijima1,AsamiMichikawa1, Yuka Motoi2, Kazuhiro Sato2 and Shigeo Takumi1 Abstract Background: Aegilops umbellulata Zhuk. (2n = 14), a wild diploid wheat relative, has been the source of trait improvement in wheat breeding. Intraspecific genetic variation of Ae. umbellulata, however, has not been well studied and the genomic information in this species is limited. Results: To develop novel genetic markers distributed over all chromosomes of Ae. umbellulata and to evaluate its genetic diversity, we performed RNA sequencing of 12 representative accessions and reconstructed transcripts by de novo assembly of reads for each accession. A large number of single nucleotide polymorphisms (SNPs) and insertions/deletions (indels) were obtained and anchored to the pseudomolecules of Ae. tauschii and barley (Hordeum vulgare L.), which were regarded as virtual chromosomes of Ae. umbellulata. Interestingly, genetic diversity in Ae. umbellulata was higher than in Ae. tauschii, despite the narrow habitat of Ae. umbellulata. Comparative analyses of nucleotide polymorphisms between Ae. umbellulata and Ae. tauschii revealed no clear lineage differentiation and existence of alleles with rarer frequencies predominantly in Ae. umbellulata, with patterns clearly distinct from those in Ae. tauschii. Conclusions: The anchored SNPs, covering all chromosomes, provide sufficient genetic markers between Ae. umbellulata accessions. The alleles with rarer frequencies might be the main source of the high genetic diversity in Ae. -
Resistance of Sharon Goatgrass (Aegilops Sharonensis) to Fungal Diseases of Wheat
e-Xtra* Resistance of Sharon Goatgrass (Aegilops sharonensis) to Fungal Diseases of Wheat P. D. Olivera, Department of Plant Pathology, University of Minnesota, St. Paul 55108; J. A. Kolmer, United States Department of Agriculture–Agricultural Research Service, Cereal Disease Laboratory, Department of Plant Pathol- ogy, University of Minnesota, St. Paul 55108; Y. Anikster, Institute for Cereal Crops Improvement, Tel Aviv Univer- sity, Ramat Aviv, Israel 69978; and B. J. Steffenson, Department of Plant Pathology, University of Minnesota, St. Paul 55108 breeders must be vigilant for virulence ABSTRACT changes in the stem rust population. For Olivera, P. D., Kolmer, J. A., Anikster, Y., and Steffenson, B. J. 2007. Resistance of Sharon goat- example, in 1999, a new race of P. grass (Aegilops sharonensis) to fungal diseases of wheat. Plant Dis. 91:942-950. graminis f. sp. tritici (race TTKS or isolate Ug99) was discovered in eastern Africa Sharon goatgrass (Aegilops sharonensis) is a wild relative of wheat that is native to Israel and that possesses virulence for many of the Lebanon. The importance of A. sharonensis as a source of new resistance genes for wheat war- wheat cultivars grown in the Great Plains rants additional research on the characterization of accessions for economically important genes. region (48). The introduction of such a Thus, the objectives of this study were to evaluate a collection of A. sharonensis accessions for race into the United States will have devas- resistance to seven important fungal diseases of wheat and assess the phenotypic diversity of the germplasm for disease reaction. The frequency of resistance in A. -
Assessment of Genetic Diversity in Triticum Spp. and Aegilops Spp
African Journal of Biotechnology Vol. 7 (5), pp. 546-552, 4 March, 2008 Available online at http://www.academicjournals.org/AJB DOI: 10.5897/AJB07.837 ISSN 1684–5315 © 2008 Academic Journals Full Length Research Paper Assessment of genetic diversity in Triticum spp. and Aegilops spp. using AFLP markers M. Khalighi 1, A. Arzani 1* and M. A. Poursiahbidi 2 1Department of Agronomy and Plant Breeding, College of Agriculture, Isfahan University of Technology, Isfahan-84156 83111, Iran. 2Ilam Agricultural Research Center, Ilam-69317 73834, Iran. Accepted 17 December, 2007 Genetic diversity among some wild relatives of wheat was estimated using amplified fragment length polymorphism (AFLP) and morphological markers. Thirty one Triticum and Aegilops genotypes including twenty-four Triticum and Aegilops accessions belonging to five diploid ( Triticum baeoticum , Triticum monococcum , Aegilops umbellulata , Aegilops caudata and Aegilops tauschii ), five tetraploid (Triticum dicoccoides, Triticum dicoccum, Aegilops crassa (4x) , Aegilops cylindrica, Aegilops triuncialis ) and two hexaploid ( Triticum compactum , A. crassa (6x)) species sampled from different eco- geographical regions of Iran; a durum wheat cultivar 'Langdon', a local wheat cultivar 'Roshan', a wheat cultivar 'Chinese spring' and four synthetic hexaploid wheats were evaluated. Genetic diversity among wheat accessions was estimated using 14 Pst I: Mse I primer pair combinations. Of the approximately 414 detected AFLP markers, 387 (93.5%) were polymorphic with 28 bands per used primer pair. Cluster analysis of 31 accessions belonging to the 15 species by UPGMA cluster analysis based on Jaccard’s similarity estimates for AFLP data divided all accessions into two major clusters reflecting almost their genome composition. The first one included wheat species having A and AB genomes, while second cluster included wheat species having C, D, AB, CD, UC, DM, DDM and ABD genomes. -
Substrate Preferences of Ruderal Plants in Colonizing Stone Monuments of the Pasargadae World Heritage Site, Iran
sustainability Article Substrate Preferences of Ruderal Plants in Colonizing Stone Monuments of the Pasargadae World Heritage Site, Iran Zohreh Hosseini * , Giulio Zangari, Marta Carboni and Giulia Caneva Department of Science, University of Roma Tre, 00146 Rome, Italy; [email protected] (G.Z.); [email protected] (M.C.); [email protected] (G.C.) * Correspondence: [email protected]; Tel.: +39-06-5733-6374 Abstract: Plant colonization on archaeological structures is limited by the substrate conditions of stone surfaces. Despite its relevance for ecological studies and the management plans of archaeologi- cal sites, the knowledge on monuments substrate (e.g., stones, microhabitats, microsites), which could be suitable sites for plant establishment, is an underestimated topic. Here, we aim to identify the sub- strate preference of plants in colonizing stone surfaces as a first step in evaluating the biodeterioration risk. We selected the Pasargadae World Heritage Site (WHS) for its variety of different conditions, and we assessed the substrate preference of 142 ruderal plants occurring on nine monuments, two types of stones, and eight microsites. Our data indicated that stone typology and microsite conditions affected species composition, diversity, and richness. The porosity of the different limestone and the progressive weathering phenomena resulted as relevant factors in plant colonization. Significantly, microsites as a junction of two stone blocks (M1a) and big fractures covered by soil (M3) hosted the most favorable conditions, which needed periodic monitoring during the maintenance activities of the site. Evaluating the substrate preference of ruderal plants can contribute to the identification of the high-risk areas for plant colonization, which need to be considered in the management plans of Citation: Hosseini, Z.; Zangari, G.; archaeological sites. -
Phenotypic Effects of the U-Genome Variation in Nascent Synthetic
Kobe University Repository : Kernel Phenotypic effects of the U-genome variation in nascent synthetic タイトル hexaploids derived from interspecific crosses between durum wheat Title and its diploid relative Aegilops umbellulata 著者 Okada, Moeko / Michikawa, Asami / Yoshida, Kentaro / Nagaki, Author(s) Kiyotaka / Ikeda, Tatsuya M. / Takumi, Shigeo 掲載誌・巻号・ページ PLoS ONE,15(4):e0231129 Citation 刊行日 2020-04-02 Issue date 資源タイプ Journal Article / 学術雑誌論文 Resource Type 版区分 publisher Resource Version © 2020 Okada et al. This is an open access article distributed under 権利 the terms of the Creative Commons Attribution License, which permits Rights unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. DOI 10.1371/journal.pone.0231129 JaLCDOI URL http://www.lib.kobe-u.ac.jp/handle_kernel/90007136 PDF issue: 2021-10-09 PLOS ONE RESEARCH ARTICLE Phenotypic effects of the U-genome variation in nascent synthetic hexaploids derived from interspecific crosses between durum wheat and its diploid relative Aegilops umbellulata 1 1 1 2 Moeko OkadaID , Asami Michikawa , Kentaro Yoshida , Kiyotaka Nagaki , Tatsuya 3 1 M. Ikeda , Shigeo TakumiID * a1111111111 1 Graduate School of Agricultural Science, Kobe University, Kobe, Japan, 2 Institute of Plant Science and Resources, Okayama University, Okayama, Japan, 3 Western Region Agricultural Research Center, a1111111111 National Agriculture and Food Research Organization, Fukuyama, Hiroshima, Japan a1111111111 a1111111111 * [email protected] a1111111111 Abstract Aegilops umbellulata is a wild diploid wheat species with the UU genome that is an important OPEN ACCESS genetic resource for wheat breeding. To exploit new synthetic allohexaploid lines available Citation: Okada M, Michikawa A, Yoshida K, as bridges for wheat breeding, a total of 26 synthetic hexaploid lines were generated through Nagaki K, Ikeda TM, Takumi S (2020) Phenotypic effects of the U-genome variation in nascent crossing between the durum wheat cultivar Langdon and 26 accessions of Ae. -
Developing a High-Throughput SNP-Based Marker System to Facilitate the Introgression of Traits from Aegilops Species Into Bread Wheat (Triticum Aestivum)
ORIGINAL RESEARCH published: 24 January 2019 doi: 10.3389/fpls.2018.01993 Developing a High-Throughput SNP-Based Marker System to Facilitate the Introgression of Traits From Aegilops Species Into Bread Wheat (Triticum aestivum) Alexandra M. Przewieslik-Allen 1*, Amanda J. Burridge 1, Paul A. Wilkinson 1, Mark O. Winfield 1, Daniel S. Shaw 1, Lorna McAusland 2, Julie King 2, Ian P. King 2, Keith J. Edwards 1 and Gary L. A. Barker 1 1 Life Sciences, University of Bristol, Bristol, United Kingdom, 2 Plant Sciences, Sutton Bonington Campus, Leicestershire, United Kingdom The genus Aegilops contains a diverse collection of wild species exhibiting variation Edited by: in geographical distribution, ecological adaptation, ploidy and genome organization. István Molnár, Centre for Agricultural Research Aegilops is the most closely related genus to Triticum which includes cultivated wheat, (MTA), Hungary a globally important crop that has a limited gene pool for modern breeding. Aegilops Reviewed by: species are a potential future resource for wheat breeding for traits, such as adaptation Parveen Chhuneja, Punjab Agricultural University, India to different ecological conditions and pest and disease resistance. This study describes Kentaro Yoshida, the development and application of the first high-throughput genotyping platform Kobe University, Japan specifically designed for screening wheat relative species. The platform was used to Pilar Hernandez, Instituto de Agricultura Sostenible screen multiple accessions representing all species in the genus Aegilops. Firstly, the (IAS), Spain data was demonstrated to be useful for screening diversity and examining relationships *Correspondence: within and between Aegilops species. Secondly, markers able to characterize and track Alexandra M. -
Alien Introgressions and Chromosomal Rearrangements Do Not Affect the Activity of Gliadin-Coding Genes in Hybrid Lines of Triticum Aestivum L
Вавиловский журнал генетики и селекции. 2018;22(5):507-514 Генетика растений DOI 10.18699/VJ18.388 ОРИГИНАЛЬНОЕ ИССЛЕДОВАНИЕ / ORIGINAL ARTICLE Alien introgressions and chromosomal rearrangements do not affect the activity of gliadin-coding genes in hybrid lines of Triticum aestivum L. × Aegilops columnaris Zhuk. A.Yu. Novoselskaya-Dragovich , A.A. Yankovskaya, E.D. Badaeva Vavilov Institute of General Genetics, RAS, Moscow, Russia Using chromosome C-banding and electrophoresis of Интрогрессии и хромосомные grain storage proteins, gliadins, 17 Triticum aestivum- перестройки не влияют на Aegilops columnaris lines with substitutions of активность глиадинкодирующих chromosomes of homoeologous groups 1 and 6 were examined. Based on their high polymorphism, gliadins генов в линиях гибридов Triticum were used to identify alien genetic material. For all of the aestivum L. × Aegilops columnaris Zhuk. lines examined, electrophoretic analysis of gliadin spectra confirmed substitution of wheat chromosomes 6A, 6D А.Ю. Новосельская-Драгович , А.А. Янковская, or 1D for the homoeologous Aegilops chromosomes of Е.Д. Бадаевa genomes Uс or Xс. The substitution manifested in the disappearance of the products of gliadin-coding genes Институт общей генетики им. Н.И. Вавилова Российской академии наук, on chromosomes 6A, 6D or 1D with the simultaneous Москва, Россия appearance of the products of genes localized on alien chromosomes of genomes Uс or Xс. Thus, Aegilops chromosomes were shown to be functionally active in Вид дикорастущей пшеницы Aegilops columnaris Zhuk. the alien wheat genome. The absence of alien genes представляет собой потенциальный источник новых генов, expression in the lines carrying a long arm deletion in важных для улучшения хозяйственно ценных признаков chromosome 6Xc suggested that the gliadin-coding пшеницы.