Substrate Preferences of Ruderal Plants in Colonizing Stone Monuments of the Pasargadae World Heritage Site, Iran
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CHLOROPLAST Matk GENE PHYLOGENY of SOME IMPORTANT SPECIES of PLANTS
AKDENİZ ÜNİVERSİTESİ ZİRAAT FAKÜLTESİ DERGİSİ, 2005, 18(2), 157-162 CHLOROPLAST matK GENE PHYLOGENY OF SOME IMPORTANT SPECIES OF PLANTS Ayşe Gül İNCE1 Mehmet KARACA2 A. Naci ONUS1 Mehmet BİLGEN2 1Akdeniz University Faculty of Agriculture Department of Horticulture, 07059 Antalya, Turkey 2Akdeniz University Faculty of Agriculture Department of Field Crops, 07059 Antalya, Turkey Correspondence addressed E-mail: [email protected] Abstract In this study using the chloroplast matK DNA sequence, a chloroplast-encoded locus that has been shown to be much more variable than many other genes, from one hundred and forty two plant species belong to the families of 26 plants we conducted a study to contribute to the understanding of major evolutionary relationships among the studied plant orders, families genus and species (clades) and discussed the utilization of matK for molecular phylogeny. Determined genetic relationship between the species or genera is very valuable for genetic improvement studies. The chloroplast matK gene sequences ranging from 730 to 1545 nucleotides were downloaded from the GenBank database. These DNA sequences were aligned using Clustal W program. We employed the maximum parsimony method for phylogenetic reconstruction using PAUP* program. Trees resulting from the parsimony analyses were similar to those generated earlier using single or multiple gene analyses, but our analyses resulted in strict consensus tree providing much better resolution of relationships among major clades. We found that gymnosperms (Pinus thunbergii, Pinus attenuata and Ginko biloba) were different from the monocotyledons and dicotyledons. We showed that Cynodon dactylon, Panicum capilare, Zea mays and Saccharum officiarum (all are in the C4 metabolism) were improved from a common ancestors while the other cereals Triticum Avena, Hordeum, Oryza and Phalaris were evolved from another or similar ancestors. -
Production of Disomic Wheat-Barley Chromosome Addition Lines Using Hordeum Bulbosum Crosses
Genet. Res., Gamb. (1981), 37, pp. 215-219 215 Printed in Great Britain SHORT PAPER Production of disomic wheat-barley chromosome addition lines using Hordeum bulbosum crosses BY A. K. M. R. ISLAM AND K. W. SHEPHERD Department of Agronomy, Waite Agricultural Research Institute, The University of Adelaide, Glen Osmond, South Australia, 5064 (Received 1 September 1980) SUMMARY The possibility of using Hordeum bulbosum Crosses to facilitate production of disomic wheat-barley addition lines from monosomic additions was investigated. Aneuhaploids with 22 chromosomes were obtained in the expected gametic frequencies after crossing monosomic, disomio and monotelo-disomic addition lines, involving four different barley chromosomes, as the female parent with tetraploid H. bulbosum. Thus the added barley chromosomes were not eliminated when preferential elimination of the bulbosum chromo- somes took place in the hybrid embryos. Disomic addition lines were obtained after treating the aneuhaploids with colchicine. This method could have wider application in the production of other wheat-alien chromosome disomic addition lines, especially where the transmission frequency of the alien chromosome through the pollen is very low, but its use will depend on the wheat parent being crossable with H. bulbosum and the alien chromosome being retained during the elimination of bulbosum chromosomes. 1. INTRODUCTION After O'Mara (1940) described a systematic procedure for adding individual pairs of rye chromosomes to wheat, many other workers have used a similar approach to add chromosomes of several other alien species to wheat. These addition lines have had many uses including assigning genes in the alien species to particular chromosomes, determining the genetic similarity (homoeology) between alien chromosomes and particular wheat chromosomes, and also for transferring desirable characters such as disease resistance from the alien species to wheat. -
Establishment of a Global Network for the in Situ Conservation of Crop Wild Relatives: Status and Needs
THEMATIC BACKGROUND STUDY Establishment of a Global Network for the In Situ Conservation of Crop Wild Relatives: Status and Needs Nigel Maxted and Shelagh Kell BACKGROUND STUDY PAPER NO. 39 October 2009 COMMISSION ON GENETIC RESOURCES FOR FOOD AND AGRICULTURE ESTABLISHMENT OF A GLOBAL NETWORK FOR THE IN SITU CONSERVATION OF CROP WILD RELATIVES: STATUS AND NEEDS by *By Nigel Maxted and Shelagh Kell The content of this document is entirely the responsibility of the authors, and does not .necessarily represent the views of the FAO, or its Members 2 * School of Biosciences, University of Birmingham. Disclaimer The content of this document is entirely the responsibility of the authors, and does not necessarily represent the views of the Food and Agriculture Organization of the United Nations (FAO), or its Members. The designations employed and the presentation of material do not imply the expression of any opinion whatsoever on the part of FAO concerning legal or development status of any country, territory, city or area or of its authorities or concerning the delimitation of its frontiers or boundaries. The mention of specific companies or products of manufacturers, whether or not these have been patented, does not imply that these have been endorsed by FAO in preference to others of a similar nature that are not mentioned. CONTENTS SUMMARY 6 ACKNOWLEDGEMENTS 7 PART 1: INTRODUCTION 8 1.1 Background and scope 8 1.2 The global and local importance of crop wild relatives 10 1.3 Definition of a crop wild relative 12 1.4 Global numbers of crop -
Triticeae Biodiversity and Conservation, a “Genebanker” View
Czech J. Genet. Plant Breed., 41, 2005 (Special Issue) Triticeae Biodiversity and Conservation, a “Genebanker” View V. H������ Department of Gene Bank, Research Institute of Crop Production, 161 06 Prague-Ruzyně, Czech Republic, e-mail: [email protected] Abstract: Wild Triticeae are important genetic resources for cultivated cereals. While wild and primitive wheats are well preserved, other genera are rather neglected. Most of Triticeae have a large area of distribution, many occupy secondary habitats, or are weedy. However, there are also species with a limited distribution and those need primary attention in conservation. Annuals can be easily stored ex situ as easily as cultivated cereals; peren- nials have their longevity shortened. For successful conservation of genetic diversity one sample of a species is not enough. It is necessary to collect samples from the whole distribution area. Geographically distant popula- tions differ not only morphologically, but can have different spectra of genes. Even within a population there are large differences. For species scattered in distribution or restricted to a certain small area, it is reasonable to consider their in situ conservation. The basic requirement is to protect the locality/ies and to ensure that they are managed for sustainable reproduction of the Triticeae. Basically, this requires maintaining acceptable levels of use by man (grazing and disturbance), acceptable levels of plant competition from other species, and controlling allochtonous invasive species. Localities with in situ conservation require instant monitoring. A detailed docu- mentation (so called passport data) is prerequisite for both ex situ and in situ conservation. The taxonomic system must be conservative, without frequent nomenclatoral changes. -
Karyology of the Scorzonera L. (Asteraceae) Taxa from Turkey
E. MARTİN, Ö. ÇETİN, S. MAKBUL, A. DURAN, M. ÖZTÜRK, D. BODUROĞLU, B. EŞMEKAYA Turk J Biol 36 (2012) 187-199 © TÜBİTAK doi:10.3906/biy-1008-46 Karyology of the Scorzonera L. (Asteraceae) taxa from Turkey Esra MARTİN1, Özlem ÇETİN1, Serdar MAKBUL2, Ahmet DURAN1, Meryem ÖZTÜRK1, Derya BODUROĞLU1, Bahriye EŞMEKAYA3 1Department of Biology Education, Selçuk University, Ahmet Keleşoğlu Education Faculty, Konya - TURKEY 2Department of Biology, Rize University, Science and Arts Faculty, Rize - TURKEY 3Department of Biology, Niğde University, Science and Arts Faculty, Niğde - TURKEY Received: 09.08.2010 Abstract: In this study, the karyotypes of 13 taxa of the tribe Lactuceae growing naturally in Turkey were examined. Of the species of the genus Scorzonera L. (Asteraceae), S. laciniata L. subsp. laciniata, S. cana (C.A.Mey.) Hoff m. var. jacquiniana (W.Koch) Chamb., S. suberosa C.Koch subsp. suberosa, S. mollis M.Bieb. subsp. mollis, S. papposa DC., S. lacera Boiss. & Bal., S. elata Boiss., and S. parvifl ora Jacq. have a diploid chromosome number of 2n = 14. For S. phaeopappa (Boiss.) Boiss., this number is 2n = 28, and for S. eriophora DC., S. pseudolanata Grossh., S. tomentosa L., and S. kotschyi Boiss., it is 2n = 12. Th e average chromosome length of the taxa examined was between 1.20 and 7.63 μm. All of the taxa have median and submedian chromosome pairs in their chromosome morphologies. With the exception of S. parvifl ora, the chromosome morphologies of the taxa examined are presented here for the first time. Key words: Scorzonera, Compositae, karyotype, Turkey Türkiye’den Scorzonera L. -
Interspecific Hybridization Between Durum Wheat and Aegilops Umbellulata (Zhuk.)
713 Bulgarian Journal of Agricultural Science, 18 (No 5) 2012, 713-721 Agricultural Academy INTERSPECIFIC HYBRIDIZATION BETWEEN DURUM WHEAT AND AEGILOPS UMBELLULATA (ZHUK.) B. HADZHIIVANOVA, V. BOZHANOVA and D. DECHEV Field Crops Institute, BG - 6200 Chirpan, Bulgaria Abstract HADZHIIVANOVA, B., V. BOZHANOVA and D. DECHEV, 2012. Interspecific hybridization between durum wheat and Aegilops umbellulata (Zhuk.). Bulg. J. Agric. Sci., 18: 713-721 The possibility for obtaining of interspecific hybrids between three durum wheat genotypes (Triticum durum, 2n = 4x = 28, AABB genomes) and one accession of Aegilops umbellulata (2n = 2x = 18, UU genome) during two different seasons has been studied. A low crossability rate of 3% average for all genotypes over two years was achieved. The observed variation of crossability is due to a greatest extent to the genotype of durum wheat parent with 82.91% from total variation. Hybrid plants were obtained only by means of embryo rescue method. The ability for in vitro regeneration was still independent of crossability of used durum wheat genotypes. All received F1 hybrids plants were identical they exhibited good tillering ability and manifested traits from both parents. In spite of the observed partially fertility in F1 hybrids between durum wheat and Aegilops umbellulata no germination of the hybrid seeds was ascertained. BC1 seeds were obtained from F1 hybrids of hybrid combination Beloslava × Aegilops umbellulata after backcrossing to the durum wheat parent. An increase of crossability with advancing of backcross progenies – from 1.6% in BC1 hybrids to 26.2% in BC2 hybrids has been found. Meiotic abnormalities including dyads and triads at the end of microsporogenesis as well as uninucleate microspores with a different shape and size were observed suggesting production of unreduced gametes in this cross. -
Taxonomy and Phylogeny in Triticeae: a Historical Review and Current Status
Advances in Plants & Agriculture Research Review Article Open Access Taxonomy and phylogeny in Triticeae: a historical review and current status Abstract Volume 3 Issue 5 - 2016 The Triticeae is an economically important tribe within the Poaceae. Because a number of cereal crops and forage grasses belong to the tribe it has attracted much scientific Mohannad G Al–Saghir attention covering many species: taxonomy, phylogeny, genetics, cytogenetic, genome Department of Environmental and Plant Biology, Ohio analyses (crossing ability and chromosome pairing), isoenzymes, molecular biology University, USA (RFLP, RAPD, PCR sequencing) and breeding. This paper contains a brief historical outline of the taxonomy of the tribe. Phylogenetic hypotheses regarding this tribe Correspondence: Mohannad G Al–Saghir, Department of inferred from different methods, techniques and approaches, are reviewed. The Environmental and Plant Biology, Ohio University, Zanesville, different phylogenies are discussed and compared and conflicts are elucidated. Ohio, USA, Email al–[email protected] Keywords: triticeae, phylogeny, taxonomy, poaceae, perennial species, durum Received: April 23, 2016 | Published: May 10, 2016 wheat, phylogenies, genetic diversity, cytogenetics, molecular biology, chromosomes, perennial, caespitose, thizomatous species Introduction as cited above. We can therefore conclude that the most appropriate outgroup for the tribe will be Bromus. The tribe Triticeae Dum is economically the most important tribe in the grass family (Poaceae). It encompasses between 350 and 500 Definition annual or perennial species,1–3 including the important cereal crops wheat (Triticum aestivium L.), durum wheat (T. turgidum sup. durum The Triticeae encompasses annual and perennial, caespitose or (Desf. MacKay) barley (Hordeum vulgare L.), rye (Secale cereal L.) thizomatous species. -
Molecular Analyses of the Genera Eremopyrum (Ledeb.) Jaub
Pak. J. Bot., 46(3): 769-774, 2014. MOLECULAR ANALYSES OF THE GENERA EREMOPYRUM (LEDEB.) JAUB. & SPACH AND AGROPYRON GAERTNER (POACEAE) BY PCR METHODS REMZİYE YILMAZ1, EVREN CABİ2* AND MUSA DOGAN3 1Middle East Technical University, Central Laboratory, Molecular Biology & Biotechnology R&D Center, 06530, Ankara, Turkey 2Namık Kemal University, Department of Biology, 59030 Tekirdağ, Turkey, 3Middle East Technical University, Department of Biological Sciences, 06530, Ankara-Turkey *Corresponding author’s e-mail: [email protected]; [email protected]; Ph: +90-282-2502670 Abstract RAPD-PCR (Random Amplified Polymorphic DNA Polymerase Chain Reaction) and Post PCR (Polymerase Chain Reaction) Melting Curve Analysis (MCA) have been used to investigate the pattern of genetic variation among some species in the genera Eremopyrum (Ledeb.) Jaub. & Spach and Agropyron Gaertner (Poaceae). Thirteen primers have been used in the study based on the RAPD-PCR and MCA analyses. Each species produced a distinct pattern of DNA fragments which have been used as a measure of the degree of relationship between species by means of using the RAPD-PCR results with three primers selected for identifying the genetic similarities. Polymorphic melting profiles have been obtained with Post PCR MCA method using three primers. Genetic similarities are calculated for all the species studied with RAPD-PCR and MCA methods, the dendrograms are obtained with the MVSP (Multi Variate Statistical Package) software using UPGMA (Unweighted Pair Group Method with Arithmetic Averages) and Jaccard’s Coefficient. Polymorphism between 18 populations of Eremopyrum and 6 Agropyron populations and within the species are determined by using RAPD-PCR and Post PCR melting curve analysis (MCA) respectively. -
Having Gametic Chromosome Number Are Called Haploids
Session-10 Classification of Haploids Haploids: Plants (or the sporophyte) having gametic chromosome number are called haploids. Classification of Haploids: According to their cytological features, haploids have been classified into different types (Fig. 17.1), a brief description of which is given below. I. Euhaploid: The chromosome number of such a haploid is an exact multiple of one of the basic numbers of the group. Euhaploids are of two types: i) Mono-haploid or monoploid: It arises from a diploid species (2x) and possesses the gametic chromosome number of the species; it is designated as “x”. (ii) Polyhaploid: Haploid individuals arising from a polyploid species (4x (autotetraploid), 6x (autohexaploid), etc.,) are called polyhaploids; they may be di-haploids (with 2x), tri- haploids (3x) and so on. Based on their auto- or allo-ploid condition, polyhaploids have been divided into two groups: (a) Auto-polyhaploid : Autopolyploid species give rise to auto-polyhaploids. For example, Autotetraploid (Ax = AAAA)———-> Auto-di-haploid (2n = AA) Auto-hexaploid (6x = AAAAAA)———–> Auto-tri-haploid (3x = AAA) (b) Allopolyhaploid : Such individuals arise from allopolyploid species. For example, Allotetraploid {Ax = AABB)———-> Allodihaploid (2x = AB) Allohexaploid (6x = AABBDD)———–> Allotrihaploid (3x = ABD) II. Aneuhaploid: The chromosome number of such a haploid is not an exact multiple of the basic number of the group. Aneuhaploids have been classified into five types: (i) Disomic haploids (n + 1): Such haploids have one chromosome in disomic condition, i.e., there is one extra chromosome belonging to the genome involved. (ii) Addition haploids (n + few alien): The extra chromosome(s) in the haploid is an alien chromosome. -
Phytochemical Composition and Biological Activities of Scorzonera Species
International Journal of Molecular Sciences Review Phytochemical Composition and Biological Activities of Scorzonera Species Karolina Lendzion 1 , Agnieszka Gornowicz 1,* , Krzysztof Bielawski 2 and Anna Bielawska 1 1 Department of Biotechnology, Medical University of Bialystok, Kilinskiego 1, 15-089 Bialystok, Poland; [email protected] (K.L.); [email protected] (A.B.) 2 Department of Synthesis and Technology of Drugs, Medical University of Bialystok, Kilinskiego 1, 15-089 Bialystok, Poland; [email protected] * Correspondence: [email protected]; Tel.: +48-85-748-5742 Abstract: The genus Scorzonera comprises nearly 200 species, naturally occurring in Europe, Asia, and northern parts of Africa. Plants belonging to the Scorzonera genus have been a significant part of folk medicine in Asia, especially China, Mongolia, and Turkey for centuries. Therefore, they have become the subject of research regarding their phytochemical composition and biological activity. The aim of this review is to present and assess the phytochemical composition, and bioactive potential of species within the genus Scorzonera. Studies have shown the presence of many bioactive compounds like triterpenoids, sesquiterpenoids, flavonoids, or caffeic acid and quinic acid derivatives in extracts obtained from aerial and subaerial parts of the plants. The antioxidant and cytotoxic properties have been evaluated, together with the mechanism of anti-inflammatory, analgesic, and hepatoprotective activity. Scorzonera species have also been investigated for their activity against several bacteria and fungi strains. Despite mild cytotoxicity against cancer cell lines in vitro, the bioactive properties in wound healing therapy and the treatment of microbial infections might, in perspective, be the starting point for the research on Scorzonera species as active agents in medical products designed for Citation: Lendzion, K.; Gornowicz, miscellaneous skin conditions. -
Vascular Plant Diversity of the Alanya Castle Walls and Their Ecological Effects
www.biodicon.com Biological Diversity and Conservation ISSN 1308-8084 Online ISSN 1308-5301 Print Research article/Araştırma makalesi 13/1 (2020) 9-18 DOI: 10.46309/biodicon.2020.731423 Vascular plant diversity of the Alanya Castle walls and their ecological effects Ahmet AKSOY 1, Jale ÇELİK *2 ORCID: 0000-0002-9696-7122; 0000-0002-3624-2146 1 University of Akdeniz, Faculty of Science, Department of Biology, Antalya, Turkey 2 University of Akdeniz, Institute of Science and Technology, Department of Biology, Antalya, Turkey Abstract Since historical buildings are living mirrors of the past, it is very important to preserve and transfer them to future generations. In this study, plants growing on the walls of Alanya Castle were identified and the damages that these plants gave to the historical construction and the precautions to be taken to prevent these damages were emphasized. A total of 94 plant taxa, including five pteridophytes, one gymnosperm and 88 angiosperms, belonging to 35 families were identified on the walls of Alanya Castle. Conyza canadensis, Inula heterolepis, Phagnalon graecum, Arabis verna, Mercurialis annua, Fumaria parviflora, Cymbalaria microcalyx, Galium canum subsp. antalyense, Parietaria judaica, Hyoscyamus aureus, Poa bulbosa were the dominant plant species of Alanya Castle walls. Possible seed dispersion of these plants on the castle walls and the methods for controlling them are discussed in detail. We conclude that the most effective method of combating plants that grow naturally on historical buildings and give damage to these buildings is mechanical excavation. Key words: Alanya, biodiversity, mechanical excavation, urban ecosystems, wall flora ---------- ---------- Alanya Kalesi duvarlarının vasküler bitki çeşitliliği ve ekolojik etkileri Özet Tarihi yapılar geçmişin yaşayan aynaları olduklarından, onları korumak ve gelecek nesillere aktarmak çok önemlidir. -
Vascular Plants and a Brief History of the Kiowa and Rita Blanca National Grasslands
United States Department of Agriculture Vascular Plants and a Brief Forest Service Rocky Mountain History of the Kiowa and Rita Research Station General Technical Report Blanca National Grasslands RMRS-GTR-233 December 2009 Donald L. Hazlett, Michael H. Schiebout, and Paulette L. Ford Hazlett, Donald L.; Schiebout, Michael H.; and Ford, Paulette L. 2009. Vascular plants and a brief history of the Kiowa and Rita Blanca National Grasslands. Gen. Tech. Rep. RMRS- GTR-233. Fort Collins, CO: U.S. Department of Agriculture, Forest Service, Rocky Mountain Research Station. 44 p. Abstract Administered by the USDA Forest Service, the Kiowa and Rita Blanca National Grasslands occupy 230,000 acres of public land extending from northeastern New Mexico into the panhandles of Oklahoma and Texas. A mosaic of topographic features including canyons, plateaus, rolling grasslands and outcrops supports a diverse flora. Eight hundred twenty six (826) species of vascular plant species representing 81 plant families are known to occur on or near these public lands. This report includes a history of the area; ethnobotanical information; an introductory overview of the area including its climate, geology, vegetation, habitats, fauna, and ecological history; and a plant survey and information about the rare, poisonous, and exotic species from the area. A vascular plant checklist of 816 vascular plant taxa in the appendix includes scientific and common names, habitat types, and general distribution data for each species. This list is based on extensive plant collections and available herbarium collections. Authors Donald L. Hazlett is an ethnobotanist, Director of New World Plants and People consulting, and a research associate at the Denver Botanic Gardens, Denver, CO.