Draft Plant Propagation Protocol
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Lundberg Et Al. 2009
Molecular Phylogenetics and Evolution 51 (2009) 269–280 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Allopolyploidy in Fragariinae (Rosaceae): Comparing four DNA sequence regions, with comments on classification Magnus Lundberg a,*, Mats Töpel b, Bente Eriksen b, Johan A.A. Nylander a, Torsten Eriksson a,c a Department of Botany, Stockholm University, SE-10691, Stockholm, Sweden b Department of Environmental Sciences, Gothenburg University, Box 461, SE-40530, Göteborg, Sweden c Bergius Foundation, Royal Swedish Academy of Sciences, SE-10405, Stockholm, Sweden article info abstract Article history: Potential events of allopolyploidy may be indicated by incongruences between separate phylogenies Received 23 June 2008 based on plastid and nuclear gene sequences. We sequenced two plastid regions and two nuclear ribo- Revised 25 February 2009 somal regions for 34 ingroup taxa in Fragariinae (Rosaceae), and six outgroup taxa. We found five well Accepted 26 February 2009 supported incongruences that might indicate allopolyploidy events. The incongruences involved Aphanes Available online 5 March 2009 arvensis, Potentilla miyabei, Potentilla cuneata, Fragaria vesca/moschata, and the Drymocallis clade. We eval- uated the strength of conflict and conclude that allopolyploidy may be hypothesised in the four first Keywords: cases. Phylogenies were estimated using Bayesian inference and analyses were evaluated using conver- Allopolyploidy gence diagnostics. Taxonomic implications are discussed for genera such as Alchemilla, Sibbaldianthe, Cha- Fragariinae Incongruence maerhodos, Drymocallis and Fragaria, and for the monospecific Sibbaldiopsis and Potaninia that are nested Molecular phylogeny inside other genera. Two orphan Potentilla species, P. miyabei and P. cuneata are placed in Fragariinae. -
List of Plants for Great Sand Dunes National Park and Preserve
Great Sand Dunes National Park and Preserve Plant Checklist DRAFT as of 29 November 2005 FERNS AND FERN ALLIES Equisetaceae (Horsetail Family) Vascular Plant Equisetales Equisetaceae Equisetum arvense Present in Park Rare Native Field horsetail Vascular Plant Equisetales Equisetaceae Equisetum laevigatum Present in Park Unknown Native Scouring-rush Polypodiaceae (Fern Family) Vascular Plant Polypodiales Dryopteridaceae Cystopteris fragilis Present in Park Uncommon Native Brittle bladderfern Vascular Plant Polypodiales Dryopteridaceae Woodsia oregana Present in Park Uncommon Native Oregon woodsia Pteridaceae (Maidenhair Fern Family) Vascular Plant Polypodiales Pteridaceae Argyrochosma fendleri Present in Park Unknown Native Zigzag fern Vascular Plant Polypodiales Pteridaceae Cheilanthes feei Present in Park Uncommon Native Slender lip fern Vascular Plant Polypodiales Pteridaceae Cryptogramma acrostichoides Present in Park Unknown Native American rockbrake Selaginellaceae (Spikemoss Family) Vascular Plant Selaginellales Selaginellaceae Selaginella densa Present in Park Rare Native Lesser spikemoss Vascular Plant Selaginellales Selaginellaceae Selaginella weatherbiana Present in Park Unknown Native Weatherby's clubmoss CONIFERS Cupressaceae (Cypress family) Vascular Plant Pinales Cupressaceae Juniperus scopulorum Present in Park Unknown Native Rocky Mountain juniper Pinaceae (Pine Family) Vascular Plant Pinales Pinaceae Abies concolor var. concolor Present in Park Rare Native White fir Vascular Plant Pinales Pinaceae Abies lasiocarpa Present -
Alaska Natural Heritage Program National Park Service Alaska
GLACIER BAY NATIONAL PARK AND PRESERVE VASCULAR PLANT INVENTORY GLACIER BAY NATIONAL PARK AND PRESERVE VASCULAR PLANT INVENTORY FINAL TECHNICAL REPORT Matthew L. Carlson, Keith Boggs, Robert Lipkin, & Julie A. Michaelson Alaska Natural Heritage Program Environment and Natural Resources Institute University of Alaska Anchorage 707 A Street Anchorage, Alaska 99501 National Park Service Alaska Region Inventory & Monitoring Program NPS Report : April 2004 Cooperative Agreement No. 1443CA991000013 Funding Source: National Park Service, Inventory & Monitoring Program 1 GLACIER BAY NATIONAL PARK AND PRESERVE VASCULAR PLANT INVENTORY ABSTRACT In 2001 and 2003 the Alaska Natural Heritage Program (AKNHP) conducted vascular plant field inventories in Glacier Bay National Park and Preserve in accordance with a cooperative agreement with the National Park Service. The primary goal was to document greater than 90% of the vascular plant species expected to occur within the park and significantly improve our understanding of current species distributions. The inventory targeted diverse habitat types and poorly-sampled areas. The AKNHP staff visited eight diverse ecogeographic regions and sampled intensively within these regions from late June to mid-August, 2001 and late June to early July in 2003. A total of 555 specimens were collected, recorded, pressed, and curated. Of the 333 individual taxa, 172 are new records for the park and an additional 44 represent verifications of previously unverified reports. A number of finds were significant range extensions or taxa of conservation concern. Collections were made of four globally restricted species: Botrychium ascendens (G2G3-S2 AKNHP rank), Platanthera chorisiana (G3-S3), Eleocharis kamtschatica (G4-S2S3), and Salix setchelliana (G4-S3). A number of collections were made of species which are very rare in Alaska, but more widespread in western North America, such as Agoseris aurantiaca, A. -
Systematics and Polyploid Evolution in Potentilleae (Rosaceae)
Systematics and polyploid evolution in Potentilleae ( R o s a c e a e ) Magnus Lundberg Systematics and polyploid evolution in Potentilleae (Rosaceae) Magnus Lundberg ©Magnus Lundberg, Stockholm 2011 Cover illustration: Fragaria virginiana, Bergianska trädgården (top) Fragaria chiloensis, Oregon, USA (bottom) Phylogeny of Fragariinae (right) Photo: Magnus Lundberg ISBN 978-91-7447-227-1 Printed in Sweden by Universitetsservice US-AB, Stockholm 2011 Distributor: Department of Botany, Stockholm University Academic dissertation for the degree of Doctor of Philosophy in Plant Systematics presented at Stockholm University 2011 Abstract Lundberg, M., 2011. Systematics and polyploid evolution in Potentilleae (Rosaceae). This thesis comprises studies of the phylogenetic relationships in the flowering plant clade Potentilleae in Rosaceae. The relationships were elucidated by using DNA sequence data from the nuclear genome as well as from the plastid genome. In particular, the focus of the studies was the investigation of allopolyploidy, i.e. speciation as a result of hybridization and subsequent chromosome doubling. A phylogenetic method was used for identifying allopolyploidy through comparison of trees resulting from the analyses of different DNA sequences. Five sub-clades were investigated. First, both the sister clades that together contain all of Potentilleae: Fragariinae and Potentilla. Secondly, three subclades of Fragariinae, namely Alchemilla in wide sense, Sibbaldia and relatives, and Fragaria. The aim was to unravel the phylogenetic relationships, including instances of allopolyploidy. Classification issues were discussed in relation to the phylogenetic results. The split between Potentilla (=Potentillinae) and Fragariinae received better support than in previous studies. The phylogeny of Fragariinae was found to be consistent with classifying ten genera: Alchemilla in wide sense (incl. -
D: Rare Plants Species and Wildlife Habitats
Appendix D – Rare Plant Species and Wildlife Habitats Rare Plant Species and Wildlife Habitats The habitat profiles created for the Wildlife Action Plan have been developed for the purpose of describing the full range of habitats that support New Hampshire’s wildlife species. However, these habitats can also serve as useful units for identifying rare plant habitats. This appendix provides lists of rare plant species known to be associated with each WAP habitat type. In accordance with the Native Plant Protection Act (NH RSA 217-A), the New Hampshire Natural Heritage Bureau (NHB) maintains a list of the state’s rarest and most imperiled plant species. This list has been developed in cooperation with researchers, conservation organizations, and knowledgeable amateur botanists. Plant locations have been obtained from sources including herbarium specimens, personal contacts, the scientific literature, and through extensive field research. The list is updated regularly to reflect changes in information. For each habitat, a list of associated rare plant species is presented. These rare plant – habitat associations are based on known occurrences of each species in New Hampshire. It is possible that an individual species will have different habitat associations elsewhere in its range. For more information on dominant and characteristic plant species for each habitat, refer to the individual habitat profiles. For each species, the following information is provided: Scientific name: The primary reference used is: Haines, Arthur. 2011. Flora Novae Angliae: A Manual for the Identification of Native and Naturalized Higher Vascular Plants of New England. Yale University Press. New Haven and London. Common name: Many plant species have more than one common name, and some common names are applied to multiple species. -
Studien Über Die Gefäss Pflanzen in Den
ACTA PHYTOGEOGRAPHICA SUECICA EDIDIT SVENSKA VÄXTGEOGRAFISKA SÄLLSKAPET xvrr STUDIEN ÜBER DIE GEFÄSS PFLANZEN IN DEN HOCHGEBIRGEN DER PITE LAPPMARK VON Tu. ARwinssoN UPPSALA 1943 A L M Q V I 8 T & W I K B E L L 8 B 0 K T R Y C K. E R I A.·B. SVENSKA V ÄXTGEOGRAFISKA SÄLLSKAPET - Stiftat den 20 april 1923 - ADRESS: UPPSALA UNIVERSITETS VÄXTBIOLOGISKA INSTITUTION, UPPSALA 6 Styrelse: Ordf. Prof. G. Einar Du Rietz, v. ordf. Prof. Hugo Osvald, sekr. Fil. lic. Edvard von Krusenstjerna, skattm. Fil. lic. Sten Ahlner, red. Docent Gunnar Degelius. Övr.: Prof. John Axel Nannfeldt, Prof. Gunnar Samuelsson, Fil. kand. Gustaf Sandberg, Prof. Carl Skottsberg, Docent Sven Thunmark. Sällskapet, som utgör en fortsättning av Svenska Växtsociologiska Sällskapet, ,är en föreningslänk mellan Sveriges växtgeografer och övriga för växtgeogra:fisk forskning intresserade personer; dess ändamä.l är att väcka, underhalla och främja intresset för växtgeogra:fien i vidsträcktaste mening, särskilt utforskandet av svensk vegetation och :flora, samt att hävda växtgeogra:fiens ställning inom svensk natur forskning». - » För detta ändamä.l skall Sällskapet verka bl. a. genom att anordna sammankomster och exkursioner, att utgiva en publikationsserie, Acta Phytogeo graphica Suecica, vilken utkommer med ett eller :flera band arligen, att främja det växtgeogra:fiska naturskyddet samt att arbeta för den växtgeografiska forskningens utnyttjande i vart lands näringsliv.» Medlemskap. Inträde vinnes genom inval efter - anmälan hos sekreteraren under ovannämnda adress. Arsavgift 5 kronor; ständig medlemsavgift 75 kronor. - Säliskapeta Acta, som beräknas utkomma med minst ett band arligen, utsändas till medlemmarna mot giropostförskott pa ·arsavgift + vorto. Abonnement. Föreningar, bibliotek, läroanstalter och andra institutioner kunna efter styrelsens prövning erhalla Acta Phytogeographica Suecica mot en ärlig abonnementsavgift, som för svenska abonnenter utgar med 5 kronor + porto, för utländska abonnenter med 7 kronor (incl. -
Potentilla Using DNA Sequences of Nuclear Ribosomal Internal Transcribed Spacers (ITS), and Implications for the Classification of Rosoideae (Rosaceae)
--Plant Pl. Syst. Evol. 211:155-179 (1998) Systematics and Evolution © Springer-Verlag 1998 Printed in Austria Phylogenetic analysis of Potentilla using DNA sequences of nuclear ribosomal internal transcribed spacers (ITS), and implications for the classification of Rosoideae (Rosaceae) TORSTEN ERIKSSON, MICHAEL J. DONOOHUE, and MALIN S. HIBBS Received December 17, 1996; in revised version March 18, 1997 Key words: Rosaceae, Rosoideae, PotentilIa, Fragaria, Duchesnea. - Phylogeny, classification, phylogenetic nomenclature, ribosomal DNA, ITS. Abstract: The circumscription of Potentilla has varied widely. To investigate the monophyly of Potentilla and the phylogenetic relationships of associated genera we used nuclear ribosomal internal transcribed spacer (ITS) DNA sequences. Fourteen species of Potentilla (sensu WOLF 1908) were included, some of which represent proposed segregate genera (such as Argentina, Comarum, Drymocallis, Duchesnea, Pentaphylloides, and Sibbaldiopsis), and 17 other genera of Rosoideae, using Prunus as outgroup. Out most parsimonious tree strongly implies that Potentilla is not monophyletic. Forcing the monophyly of Potentilla yields distinctly longer trees. Several morphological features appear to have evolved several times independently, including the swollen receptacle ("strawberry") and temate leaves. In order to minimise nomenclatural change and to name only well supported clades, Potentilla should be split into several genera, while other previously recognised genera such as Duchesnea, Horkelia, and Ivesia are best included in Potentilla. We suggest, however, that a phylogenetic nomenclature (sensu DE QuEraoz & GAUTHIEU 1994) might be a better solution. Potentilla L. is a rather large genus (c. 200-500 species) of herbaceous or some- what woody perennials distributed mainly in the Northern Hemisphere. Species diversity is highest in northern Eurasia. -
Diversity and Origin of the Central Mexican Alpine Flora
diversity Article Diversity and Origin of the Central Mexican Alpine Flora Victor W. Steinmann 1, Libertad Arredondo-Amezcua 2, Rodrigo Alejandro Hernández-Cárdenas 3 and Yocupitzia Ramírez-Amezcua 2,* 1 Facultad de Ciencias Naturales, Universidad Autónoma de Querétaro, Av. de las Ciencias s/n, Del. Sta. Rosa Jáuregui, Querétaro 76230, Mexico; [email protected] or [email protected] 2 Private Practice, Pátzcuaro, Michoacán 61600, Mexico; [email protected] 3 Herbario Metropolitano, División de Ciencias Biológicas y de la Salud, Departamento de Biología, Universidad Autónoma Metropolitana-Iztapalapa, Avenida San Rafael Atlixco #186, Colonia Vicentina, Iztapalapa, Ciudad de México 09340, Mexico; [email protected] * Correspondence: [email protected] Abstract: Alpine vegetation is scarce in central Mexico (≈150 km2) and occurs on the 11 highest peaks of the Trans-Mexican Volcanic Belt (TMVB). Timberline occurs at (3700) 3900 m, and at 4750 m vascular plants cease to exist. The alpine vascular flora comprises 237 species from 46 families and 130 genera. Asteraceae (44), Poaceae (42), and Caryophyllaceae (21) possess 45% of the species; none of the remaining families have more than 10 species. Four species are strict endemics, and eight others are near endemics. Thirteen species are restricted to alpine vegetation but also occur outside the study area. Seventy-seven species are endemic to Mexico, 35 of which are endemic to the TMVB. In terms of biogeography, the strongest affinities are with Central or South America. Fifteen species are also native to the Old World. Size of the alpine area seems to not be the determining factor for its floristic diversity. Instead, the time since and extent of the last volcanic activity, in addition to the distance from other alpine islands, appear to be important factors affecting diversity. -
White River National Forest Rare Plant Survey 2006
White River National Forest Rare Plant Survey 2006 Prepared for White River National Forest By Peggy Lyon, Janis Huggins and Georgia Doyle Colorado Natural Heritage Program 254 General Services Building Colorado State University Fort Collins CO 80523 Acknowledgments This project would not have been possible without the help of many people in the White River National Forest: Kevin Atchley for first requesting this survey and working to get a contract in place; Beth Brenneman and Keith Giezentanner who took over for Kevin when he left the area; Joe Doerr and Philip Nyland, for sharing their experience and caring about the rare plants on the forest. Also, we depend on the support of the staff of CNHP in Fort Collins, especially Dave Anderson, Jill Handwerk, Susan Spackman, and Amy Lavender. Thanks also to Tim Hogan at the CU Herbarium for assisting with identification of problem plants; Dee Malone for her expertise and transportation to Taylor Pass; and John Chapman, FS Volunteer, for his time and transportation to Warren Lakes. Colorado Natural Areas Program, under the energetic direction of Brian Kurzel, and members of the Colorado Native Plant Society assisted with a survey of the Hoosier Ridge State Natural Area. Finally, thanks to our spouses, George and Rick, for putting up with our absences over the summer, and our faithful companions Molly and Misia, who protected us from Ptarmigan and other scary things. 2 Executive Summary The White River National Forest contracted with Colorado State University in 2005 to have the Colorado Natural Heritage Program (CNHP) conduct a survey of sensitive plants on the forest. -
Taxonomic Comments on the Genus Sibbaldiopsis Rydb
Journal of the National Museum (Prague), Natural History Series Vol. 178 (4): 15-16; published on 4 September 2009 ISSN 1802-6842 (print), 1802-6850 (electronic) Copyright © Národní muzeum, Praha, 2009 Taxonomic comments on the genus Sibbaldiopsis Rydb. (Rosaceae) Juraj Paule1 & Jiří Soják2 1Department of Pharmacognosy, Pharmacobotany, University of Vienna, Althanstrasse 14, A-1090 Vienna, Austria; Current address: Heidelberg Institute of Plant Science, University of Heidelberg, Im Neuenheimer Feld 345, D-69120 Heidelberg, Germany 2Botanical Department of the National Museum in Prague, CZ-250 96 Horní Počernice, Czech Republic, e-mail: [email protected] (corresponding author) ABSTRACT. Three species originally published as members of the genus Potentilla, later classi- fied as Sibbaldiopsis, are here transferred in the genus Sibbaldia. KEY WORDS. Rosaceae, Sibbaldiopsis, Sibbaldia, Potentilla, transfer. The North American species Potentilla tridentata Aiton was classified by Wolf (1908) together with two Asian species [P. miyabei Makino and P. cuneifolia Bertol. (P. ambigua Cambess. in Jacquem.)] in a separate group (grex) called Tridentatae. Rydberg (1898, 1908), the monographer of North American members of Potentilleae, placed P. tridentata into the independent genus Sibbaldiopsis Rydb., paying special attention to the insertion of the style. However, this genus was accepted only by a small number of later authors. Based on the anther structure, P. tridentata and the two above mentioned Asian spe- cies are not closely related to Potentilla s.str., but rather belong to a distinct evolution- ary line of the tribe Potentilleae, allied with Fragaria, Dasiphora, Comarum, Sibbaldia, Sibbaldianthe, Schistophyllidium and Drymocallis (Soják 2008). Eriksson et al. (1998, 2003) included Sibbaldia procumbens L. -
Alaska Natural Heritage Program Environment and Natural Resources Institute University of Alaska Anchorage 707 a Street Anchorage, Alaska 99501
Vascular Plant Survey of UNAVCO’s PBO Site at Slope Mountain, Lake Clark National Park and Preserve Matthew L. Carlson Alaska Natural Heritage Program Environment and Natural Resources Institute University of Alaska Anchorage 707 A Street Anchorage, Alaska 99501 10 August 2007 Abstract – The University of Alaska Anchorage, Alaska Natural Heritage Program agreed to conduct a vascular plant survey of the proposed UNAVCO Plate Boundary Observatory GPS monument site at Slope Mountain in Lake Clark National Park and Preserve. The need for a plant survey was precipitated by the discovery of a number of rare plants found on surrounding peaks during vascular plant inventories in 2003 and 2005 (see Carlson et al. 2005 for details). The survey of the UNAVCO site on the northeast peak of Slope Mountain did not reveal any imperiled or critically imperiled vascular plant species. Here, I briefly outline the background of the project and rare plant concerns in the area, location and habitat of the site, survey methods, and results. Introduction – Saddle Mountain, just 12 km to the southwest of Slope Mountain, was found to have a small population of Arabis (Brassicaceae) that superficially resembled Arabis lemmonii (Fig. 1), a species that is “Critically Imperiled in Alaska” (AKNHP 2007 Rank) and known only from a single site in Alaska in the extreme eastern portion of the Chugach Mountains (Cook and Roland 2002). After collecting numerous new specimens from this site of different developmental stages and locating a new site on a Fig. 1. Arabis cf. lemmonii. Saddle Mountain Lake Clark National Park. granite nunatak on Double Glacier, it appears that the morphology of this rockcress falls within the broad concept of this species. -
An Ecological Survey of the Proposed Cedar Basin
December 1982 arJ ECOLOGICAL SURVEY OF THE PROPOSED CEDAR BASIN RESEARCH NATURaL AREA, SHASTA-TRINITY NATIONAL FOREST, CALIFORNIA (Purchase order 40-9AD6-2-606) Todd Keeler-Wolf INTRODUCTION Location and Principal Distinguishing Features History of Scientific Interest JUSTIFICATIONS The Port Orford Cedarof CCedarBasin The significance of the inland POC population Endemic and Unusual Klamath and Trinity Mountains Flora 10 Unusual Bog Species The High Diversity of Ericaceae Zoological Justification PHYSICAL FEATURES Geornorphology and Topography Geology Climate VEGETATION Shallow Lakes and Ponds Bog and Meadow Port Orford Cedar Forest Mixed Conifer Forest Red Fir-Mountain Hemlock Forest Mountain Chaparral Rock Outcrop BOUNDARIES IMPACTS RECOMMENDATIONS LITERATURE CITED APPENDIX Vascular Plant List Vertebkates Known or Suspected from Cedar Basin Vegetation Plot ~escriptions Description of Arctostaphylos klamathensis Edwards INTRODUCTION Location and Principal Distinuuishina Features: The Cedar Basin candidate RNA covers approximately 874 acres of r.ed fir-Mountain hemlock, mixed conifer, and Port Orford cedar forest with additional mountain chaparral, rock outcrop, lake, bog, and meadow communities in the northern Trinity Mountains of no~thwestern California. The proposed RNA is on the Shasta-Trinity National Forest in extreme south-central Siskiyou County. It lies within portions of sections 25 and 36 of Township 39 ,Na.rhh, Range 6 West, and sections 30 and 31 of T 39 N, R 5 W. Elevations range from ca. 5420 to 7149 feet. (see map 1). The area is about 12 road miles west of Mt. Shasta City and may be. approached to within a quarter mile by a good, oiled road (40N26). A poo~lymaintained jeep road(39N05Y) leads south off this road ca.