Mutants of Glucokinase Cause Hypoglycaemia- and Hyperglycaemia Syndromes and Their Analysis Illuminates Fundamental Quantitative Concepts of Glucose Homeostasis

Total Page:16

File Type:pdf, Size:1020Kb

Mutants of Glucokinase Cause Hypoglycaemia- and Hyperglycaemia Syndromes and Their Analysis Illuminates Fundamental Quantitative Concepts of Glucose Homeostasis Diabetologia (1999) 42: 1175±1186 Ó Springer-Verlag 1999 Mutants of glucokinase cause hypoglycaemia- and hyperglycaemia syndromes and their analysis illuminates fundamental quantitative concepts of glucose homeostasis E.A. Davis1, A. Cuesta-Muæoz1, M. Raoul1, C. Buettger1, I. Sweet1, M. Moates2, M.A. Magnuson2, F.M. Matschinsky1 1 Department of Biochemistry and Biophysics and the Diabetes Research Center, University of Pennsylvania School of Medicine, Philadelphia, Pennsylvania, USA 2 Department of Molecular Physiology and Biophysics, Vanderbilt University Medical School, Nashville, Tennessee, USA Abstract Results. Large changes, varying greatly between mu- tants were found in nearly all variables. Glucokinase Aims/hypothesis. Mutations of the glucokinase gene flux at threshold for glucose-stimulated insulin re- cause hyperglycaemia or hypoglycaemia. A quantita- lease was about 25% of total phosphorylating poten- tive understanding of these defects of glucose homeo- tial in the normal beta-cell and this was used to predict stasis linked to the glucokinase gene was lacking. thresholds for the mutant heterozygotes. Clinical data Therefore a database of kinetic variables of wild-type for maturity onset diabetes of the young type linked to and 20 missense mutants of glucokinase was devel- the glucokinase gene and familial hyperinsulinaemic oped and used in mathematical modelling to predict hypoglycaemia linked to the glucokinase gene and the thresholds for glucose-stimulated insulin release. the glucokinase kinetic data of this study were used Methods. Recombinant human glucokinase was gen- to test the model. The model predicts fasting blood erated in E. coli. The kcat, glucose S0.5, ATP Km, and glucose between 3 and 7 mmol/l in these cases. Hill number of glucokinase were determined. Inhibi- Conclusion/interpretation. A kinetics database of tion by Stearoyl CoA and glucokinase regulatory pro- wild-type and 20 mutants of glucokinase was devel- tein and thermal stability were assayed for all mutants oped. Many kinetic differences were found for the kinetically similar to wild-type glucokinase. A mathe- mutants. The mathematical model to calculate the matical model predicting the threshold for glucose- threshold for glucose-stimulated insulin release pre- stimulated insulin release was constructed. This model dicts fasting blood glucose between 3 and 7 mmol/l is based on the two substrate kinetics of glucokinase in subjects with glucokinase gene mutations. and the kinetic variables of the database. It is assumed [Diabetologia 42: 1175±1186] that both glucokinase gene alleles are equally ex- pressed in beta-cells and that induction of glucokinase Keywords MODY-2, glucokinase, glucose threshold, occurs as a function of basal blood glucose. insulin secretion, beta-cell, mathematical model. Received: 1 February 1999 and in revised form: 3 April 1999 The discoveries of linkage to the glucokinase locus on chromosome 7 in autosomal dominantly inherited Corresponding author: F.M. Matschinsky, MD, Diabetes Re- forms of diabetes mellitus (DM-gk) in 1992 [1, 2] search Center, 501 Stemmler Hall, 36th & Hamilton Walk, Philadelphia, PA 19104±6015, USA and of hyperinsulinaemia (HI-gk) [3] in 1998 gave a Abbreviations: GSIR, Glucose-stimulated insulin release; DM- considerable boost to the pancreatic beta-cell gluco- gk, maturity onset diabetes of the young type 2 (MODY-2) kinase-glucose sensor concept [4]. The concept had linked to the glucokinase gene; DM-GK, maturity onset diabe- been formulated to explain essential characteristics tes of the young with abnormal glucokinase protein; HI-gk, fa- of glucose-stimulated insulin release (GSIR) and milial hyperinsulinemic hypoglycaemia linked to the glucoki- had evolved slowly from its early beginnings in the nase gene; HI-GK, familial hyperinsulinaemic hypoglycaemia late '60s [4, 5, 6]. Extensive work with glucokinase with abnormal glucokinase protein; GKRP, glucokinae regula- tory protein; b-GPR, beta-cell glucose phosphorylation rate; h, knockout mice quickly followed the first reports of glucokinase linkage of diabetes syndromes and fully Hill Coefficient; Ia, activity index; GST-GK, glutathionyl-S- transferase-glucokinase. confirmed the findings in humans [7±9]. Meanwhile 1176 E.A. Davis et al.: Effects of glucokinase mutants on glucose homeostasis the count of glucokinase mutations causing DM-GK GSIR including factors to account for the beta-cell is approaching the 100 mark [10±15], but only one glucose threshold concept, cooperativity of glucoki- single family with HI-GK has been reported [3]. nase with regard to glucose, the interaction of glu- Precise quantitative understanding of the part that cokinase with its second substrate MgATP2- and the the beta-cell glucokinase-glucose sensor plays in nor- probability of increased protein lability due to muta- mal glucose homeostasis and the pathogenesis of tions. A sufficiently large sample size was chosen al- DM-gk and HI-gk is lacking despite the efforts of sev- lowing for a critical and comprehensive testing of eral laboratories. First reports confirmed a shift to the model predictions with published clinical data. the right of the GSIR curve and suggested some par- allel between the severity of impairment in insulin se- cretion of the diabetic phenotype and the magnitude Materials and methods of the kinetic changes of some of the mutant glucoki- nase molecules [16]. This general conclusion was not Production of recombinant glutathionyl-S-transferase-glucoki- surprising in view of the basic concept. This early nase (GST-GK.) Recombinant human wild-type and mutant analysis must now, however, be reconsidered because beta-cell GST-GK was prepared as described previously [24]. its experimental basis is in part unreliable and ad- We choose 21 different forms of the enzyme for analysis: the vances have been made in fully appreciating the wild-type, the historically significant mutant D158A, nine mu- quantitative biochemical and biophysical tenets of tants which had been partially characterized previously [18,21,24,25], nine missense mutations recently identified the glucokinase-glucose sensor paradigm in glucose from DM-gk family studies [15] and the newly described HI- homeostasis [17]. gk mutant V455M [3]. Point mutations were introduced into There are a variety of reasons to reconsider the re- the pGEX-HIGK expression vector using the QuikChange lation between kinetic data and their physiological mutagenesis kit (Stratagene, La Jolla, Calif., USA). The Oli- consequences. The most critical are uncertainties gonucoleotides used were synthesized by Research Genetics about the biochemical and biophysical data base for (Huntsville, Ala., USA). All mutants were transformed into human wild-type and mutant glucokinase. Most of E. coli (DH5a strain) and verified by DNA sequencing. Gluta- thionyl-S-transferase-glucokinase was produced in E. coli and the published kinetic data on human wild-type and then purified from crude extracts as described [24]. Briefly, sin- mutant recombinant glucokinase are probably com- gle-step affinity chromatography was used with glutathione- promised by the inclusion of the functionally signifi- agarose beads to bind the fusion protein which is then eluted with glutathione. The entire purification procedure is com- cant incidental mutant D158A, which lowers the S0.5 for glucose [18±21]. Furthermore, previous studies of- plete in less than 3 h. Purified protein is stored at ±80°Cin ten did not consider that the recombinant mutant glu- 30% glycerol, 50 mmol/l glucose, 5 mmol/l glutathione, 5 mmol/l DTT, 200 mmol/l KCl, 50 mmol/l TRIS buffer (pH cokinase protein might be unstable, that the glucose 7.4). Protein concentration was determined by the BioRad as- phosphorylation assay is greatly influenced by vari- say with bovine serum albumin as standard (Hercules, Calif., ables such as pH and ATP-glucose interactions diffi- USA). Purity of the GST-GK preparations was screened for cult to standardize and that the data processing must with SDS-PAGE. account for the cooperativity of glucokinase [17, 22]. The published mathematical modelling attempts of Kinetic variables. Glucokinase activity was measured spectro- + the role of glucokinase in glucose-stimulated insulin photometrically using an NADP coupled assay with glucose- 6-phosphate dehydrogenase as described [24]. The pH of all release GSIR are limited because they do not consid- assays was 7.4, except for assays which assessed the inhibition er critical physiological concepts such as the impact of glucokinase by glucokinase regulatory protein (GKRP) on glucose threshold of GSIR, the sigmoidicity of glu- where a pH of 7.1 was used. The rate of glucose phosphoryla- cokinase-glucose dependency and do not account for tion catalysed by glucokinase depends on the concentration of the impact on glucokinase activity of changes in the both glucose and ATP. For this reason two protocols for the as- K for the second substrate MgATP2- [23]. This com- says were used. One with glucose as a variable substrate (Pro- m tocol A) and one with ATP as the variable substrate (Protocol bined with limitations of the data base on glucokinase B). In protocol A 11 glucose dilutions with the second sub- kinetics made it difficult to achieve accurate results 2- strate MgATP at 5 mmol/l plus 1 mmol/l MgCl2 in excess from previous modelling attempts. were used for generating the glucose dependency curve and Our investigation was therefore designed to recon- to calculate Vmax, glucose S0.5 and Hill coefficient
Recommended publications
  • Hereditary Galactokinase Deficiency J
    Arch Dis Child: first published as 10.1136/adc.46.248.465 on 1 August 1971. Downloaded from Alrchives of Disease in Childhood, 1971, 46, 465. Hereditary Galactokinase Deficiency J. G. H. COOK, N. A. DON, and TREVOR P. MANN From the Royal Alexandra Hospital for Sick Children, Brighton, Sussex Cook, J. G. H., Don, N. A., and Mann, T. P. (1971). Archives of Disease in Childhood, 46, 465. Hereditary galactokinase deficiency. A baby with galactokinase deficiency, a recessive inborn error of galactose metabolism, is des- cribed. The case is exceptional in that there was no evidence of gypsy blood in the family concerned. The investigation of neonatal hyperbilirubinaemia led to the discovery of galactosuria. As noted by others, the paucity of presenting features makes early diagnosis difficult, and detection by biochemical screening seems desirable. Cataract formation, of early onset, appears to be the only severe persisting complication and may be due to the biosynthesis and accumulation of galactitol in the lens. Ophthalmic surgeons need to be aware of this enzyme defect, because with early diagnosis and dietary treatment these lens changes should be reversible. Galactokinase catalyses the conversion of galac- and galactose diabetes had been made in this tose to galactose-l-phosphate, the first of three patient (Fanconi, 1933). In adulthood he was steps in the pathway by which galactose is converted found to have glycosuria as well as galactosuria, and copyright. to glucose (Fig.). an unexpectedly high level of urinary galactitol was detected. He was of average intelligence, and his handicaps, apart from poor vision, appeared to be (1) Galactose Gackinase Galactose-I-phosphate due to neurofibromatosis.
    [Show full text]
  • Induction of Uridyl Transferase Mrna-And Dependency on GAL4 Gene Function (In Vitro Translation/Immunoprecipitation/GAL Gene Cluster/Positive Regulation) JAMES E
    Proc. Nati. Acad. Sci. USA Vol. 75, No. 6, pp. 2878-2882, June 1978 Genetics Regulation of the galactose pathway in Saccharomyces cerevisiae: Induction of uridyl transferase mRNA-and dependency on GAL4 gene function (in vitro translation/immunoprecipitation/GAL gene cluster/positive regulation) JAMES E. HOPPER*, JAMES R. BROACHt, AND LUCY B. ROWE* * Rosenstiel Basic Medical Sciences Research Center, Brandeis University, Waltham, Massachusetts 02154; and t Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724 Communicated by Norman H. Giles, April 10,1978 ABSTRACT In Saccharomyces cerevisiae, utilization of Genetic control of the inducible galactose pathway enzymes galactose requires four inducible enzyme activities. Three of involves the four structural genes GALI, GAL10, GAL7, and these activities (galactose-l-phosphate uridyl transferase, EC genes, GAL4, GAL81 (c), GAL80 2.7.7.10; uridine diphosphogalactose 4-epimerase, EC 5.1.3.2; GAL2 and four regulatory and galactokinase, EC 2.7.1.6) are specified by three tightly (i), and GALS.* Mutations in GALl, GAL10, GAL7, and GAL2 linked genes (GAL7, GALlO, and GALI, respectively) on chro- affect the individual appearance of galactokinase, epimerase, mosome II, whereas the fourth, galactose transport, is specified transferase, and galactose transport activities, respectively (6). by a gene (GALS) located on chromosome XIL Although classic Mutations defining the GALl, GAL10, and GAL7 genes have genetic analysis has revealed both positive and negative regu- invariably been recessive, and they map in three tightly linked latory genes that coordinately affect the appearance of ail four complementation groups near the centromere of chromosome enzyme activities, neither the basic events leading to the ap- pearance of enzyme activities nor the roles of the regulatory II (6, 9, 10).
    [Show full text]
  • Role of Glucokinase and Glucose-6 Phosphatase in the Nutritional Regulation of Endogenous Glucose Production G Mithieux
    Role of glucokinase and glucose-6 phosphatase in the nutritional regulation of endogenous glucose production G Mithieux To cite this version: G Mithieux. Role of glucokinase and glucose-6 phosphatase in the nutritional regulation of endogenous glucose production. Reproduction Nutrition Development, EDP Sciences, 1996, 36 (4), pp.357-362. hal-00899845 HAL Id: hal-00899845 https://hal.archives-ouvertes.fr/hal-00899845 Submitted on 1 Jan 1996 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Review Role of glucokinase and glucose-6 phosphatase in the nutritional regulation of endogenous glucose production G Mithieux Unité 197 de l’Inserm, faculté de médecine René-Laënnec, rue Guillaume-Paradin, 69372 Lyon cedex 08, France (Received 29 November 1995; accepted 6 May 1996) Summary ― Two specific enzymes, glucokinase (GK) and glucose-6 phosphatase (Gic6Pase) enable the liver to play a crucial role in glucose homeostasis. The activity of Glc6Pase, which enables the liver to produce glucose, is increased during short-term fasting, in agreement with the enhancement of liver gluconeogenesis. During long-term fasting, Glc6Pase activity is increased in the kidney, which con- tributes significantly to the glucose supply at that time.
    [Show full text]
  • Terminal Deoxynucleotidyl Transferase Protocol
    Certificate of Analysis Terminal Deoxynucleotidyl Transferase, Recombinant: Part No. Size (units) Part# 9PIM187 M828A 300 Revised 4/18 M828C 1,500 Description: This enzyme catalyzes the repetitive addition of mononucleotides to the terminal 3´-OH of a DNA initiator accompanied by the release of inorganic phosphate. Single-stranded DNA is preferred as an initiator. Polymerization is not template-dependent. The addition of 1mM Co2+ (as CoCl2) in the reaction buffer allows the tailing of 3´-ends with varying degrees of efficiency. Enzyme Storage Buffer: Terminal Deoxynucleotidyl Transferase, Recombinant, is supplied in 50mM potassium phosphate *AF9PIM187 0418M187* (pH 6.4), 100mM NaCl, 1mM β-mercaptoethanol, 0.1% Tween® 20 and 50% glycerol. AF9PIM187 0418M187 Source: Recombinant E. coli strain. Storage Conditions: See the Product Information Label for storage recommendations. Avoid multiple freeze-thaw cycles and exposure to frequent temperature changes. See the expiration date on the Product Information Label. Terminal Transferase 5X Buffer (M189A): 500mM cacodylate buffer (pH 6.8), 5mM CoCl2 and 0.5mM DTT. Unit Definition: One unit of activity catalyzes the transfer of 0.5 picomoles of ddATP to oligo(dT)16 per minute at 37°C in 1X Terminal Transferase Buffer. The resulting oligo(dT)17 is measured by HPLC. Usage Notes for 3´-End Labeling Reaction 1. Not all dNTPs are tailed with the same efficiency. Actual concentration of dNTP will depend on the individual application. 2. The provided buffer (5X) is to be used in the tailing reaction. The recommended reaction conditions are as described under Quality Control Assays, 3´-End Labeling Reaction, and in Section III overleaf.
    [Show full text]
  • Commentary Tracking Telomerase
    Cell, Vol. S116, S83–S86, January 23, 2004 Copyright 2004 by Cell Press Tracking Telomerase Commentary Carol W. Greider1 and Elizabeth H. Blackburn2,* neous size of the fragments in gel electrophoresis was 1Department of Molecular Biology and Genetics the first suggestion of unusual behavior of telomeric Johns Hopkins University School of Medicine DNA. A similar telomere repeat sequence, CCCCAAAA 725 North Wolfe Street was soon found on natural chromosome ends in other Baltimore, Maryland 21205 ciliates (Klobutcher et al., 1981). Another very unusual 2 Department of Biochemistry and Biophysics finding regarding these repeated sequences came in University of California, San Francisco 1982: David Prescott found that these repeated sequences Box 2200 are added de novo to ciliate chromosomes during the San Francisco, California 94143 developmental process of chromosome fragmentation (Boswell et al., 1982). This was the first hint that a special mechanism may exist to add telomere repeats. The Telomere Problem The next clue came from work in yeast. In a remarkable The paper reprinted here, the initial identification of telo- example of functional conservation across phylogenetic merase, resulted from our testing a very specific hypoth- kingdoms, Liz and Jack Szostak (Szostak and Black- esis: that an enzyme existed, then undiscovered, that burn, 1982) showed that the Tetrahymena telomeric se- could add telomeric repeats onto chromosome ends. quences could replace the yeast telomere entirely. A We based this hypothesis on several unexplained facts mini-chromosome with these foreign telomeres main- and creative questions being asked by people who were tained its linear structure and replicated and segregated trying to understand those facts.
    [Show full text]
  • Enhancing Terminal Deoxynucleotidyl Transferase Activity on Substrates
    G C A T T A C G G C A T genes Communication Enhancing Terminal Deoxynucleotidyl Transferase 0 Activity on Substrates with 3 Terminal Structures for Enzymatic De Novo DNA Synthesis 1,2,3, 1,2,3, 1,2,4 Sebastian Barthel y , Sebastian Palluk y, Nathan J. Hillson , 1,2,5,6,7,8,9 1,2,5,10, , Jay D. Keasling and Daniel H. Arlow * y 1 Joint BioEnergy Institute, Emeryville, CA 94608, USA; [email protected] (S.B.); [email protected] (S.P.); [email protected] (N.J.H.); [email protected] (J.D.K.) 2 Biological Systems and Engineering Division, Lawrence Berkeley National Lab, Berkeley, CA 94720, USA 3 Department of Biology, Technische Universität Darmstadt, 64287 Darmstadt, Germany 4 DOE Joint Genome Institute, Walnut Creek, CA 94598, USA 5 Institute for Quantitative Biosciences, UC Berkeley, Berkeley, CA 94720, USA 6 Department of Chemical and Biomolecular Engineering, UC Berkeley, Berkeley, CA 94720, USA 7 Department of Bioengineering UC Berkeley, Berkeley, CA 94720, USA 8 Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, 2970 Hørsholm, Denmark 9 Center for Synthetic Biochemistry, Institute for Synthetic Biology, Shenzhen Institutes for Advanced Technologies, Shenzhen 518055, China 10 Biophysics Graduate Group, UC Berkeley, Berkeley, CA 94720, USA * Correspondence: [email protected]; Tel.: +1-248-227-5556 Current address: Ansa Biotechnologies, Berkeley, CA 94170, USA. y Received: 8 December 2019; Accepted: 7 January 2020; Published: 16 January 2020 Abstract: Enzymatic oligonucleotide synthesis methods based on the template-independent polymerase terminal deoxynucleotidyl transferase (TdT) promise to enable the de novo synthesis of long oligonucleotides under mild, aqueous conditions.
    [Show full text]
  • Original Article from Clinicogenetic Studies of Maturity-Onset Diabetes of the Young to Unraveling Complex Mechanisms of Glucokinase Regulation Jørn V
    Original Article From Clinicogenetic Studies of Maturity-Onset Diabetes of the Young to Unraveling Complex Mechanisms of Glucokinase Regulation Jørn V. Sagen,1 Stella Odili,2 Lise Bjørkhaug,1,3 Dorothy Zelent,2 Carol Buettger,2 Jae Kwagh,4 Charles Stanley,4 Knut Dahl-Jørgensen,5 Carine de Beaufort,6 Graeme I. Bell,7 Yi Han,8 Joseph Grimsby,8 Rebecca Taub,8 Anders Molven,9 Oddmund Søvik,1 Pål R. Njølstad,1,3,10 and Franz M. Matschinsky2 Glucokinase functions as a glucose sensor in pancreatic of the young, type 2. Furthermore, based on data obtained ␤-cells and regulates hepatic glucose metabolism. A total of on G264S, we propose that other and still unknown mech- 83 probands were referred for a diagnostic screening of anisms participate in the regulation of glucokinase. mutations in the glucokinase (GCK) gene. We found 11 Diabetes 55:1713–1722, 2006 different mutations (V62A, G72R, L146R, A208T, M210K, Y215X, S263P, E339G, R377C, S453L, and IVS5 ؉ 1G>C) in 14 probands. Functional characterization of recombinant glutathionyl S-transferase–G72R glucokinase showed lucokinase phosphorylates glucose to glucose- slightly increased activity, whereas S263P and G264S had near-normal activity. The other point mutations were inac- 6-phosphate in the first step of glycolysis. Ow- tivating. S263P showed marked thermal instability, ing to its kinetic characteristics, glucokinase is whereas the stability of G72R and G264S differed only Gcapable of phosphorylating glucose over the slightly from that of wild type. G72R and M210K did not physiological range of 3–8 mmol/l. Unique kinetic charac- ϳ respond to an allosteric glucokinase activator (GKA) or teristics are low affinity for the substrate glucose (S0.5 7.5 the hepatic glucokinase regulatory protein (GKRP).
    [Show full text]
  • Y-Glutamyl Transferase Neutrophiles Leucocytes, Cystinotic Human
    Pediat. Res. 13: 1058-1064 (1979) Amino acid transport liver y-glutamyl transferase neutrophiles leucocytes, cystinotic human y-Glutamyl Transferase: Studies of Normal and Cystinotic Human Leukocytes, Rabbit Neutrophiles, and Rat Liver A. DESMOND PATRICK, RICHARD D. BERLIN, AND JOSEPH D. SCHULMAN Department of Chemical Pathology, Institute of Child Health, University of London, London, United Kingdom and Department of Physiology, University of Connecticut Health Center, Farmington, Connecticut, and Section on Human Biochemical and Developmental Genetics, National Institute of Child Health and Human Development. National Institutes of Health, Bethesda, Maryland, USA Summary ing the transfer of the y-glutamyl moiety to an amino acid acceptor and the release of cysteinyl-glycine (5, 6, 17, 18, 22). Cysteinyl- Evidence has been obtained in three different cell types, by a glycine is hydrolyzed to its constituent amino acids by a peptidase, combination of biochemical and histologic approaches, that some and y-glutamyl-cyclotransferase (EC 2.3.2.4) acts on the y-gluta- y-glutamyl transferase (EC 2.3.2.2) activity is associated with myl-amino acid to liberate the amino acid and convert the gluta- lysosomes. The distribution of y-glutamyl transferase in subcellu- my1 residue to 5-oxoproline (13). A link between these reactions, lar fractions of human leukocytes and its enrichment in a postnu- and those of glutathione synthesis catalysed by y-glutamylcysteine clear granule fraction were similar to the corresponding findings synthetase (EC 6.3.2.2) and glutathione synthetase (EC 6.3.2.3), for lysosomal marker enzymes. Isopycnic centrifugation of the was provided by the discovery of 5-oxoprolinase that converts 5- postnuclear fraction showed that although the bulk of the y- oxoproline to glutamate in an ATP-dependent step (43).
    [Show full text]
  • Isolation and Reactions of a Phosphorylated Form of Phosphoryl Transferase from Beef Heart Mitochondria’
    ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS 125, 884-894 (1968) Isolation and Reactions of a Phosphorylated Form of Phosphoryl Transferase from Beef Heart Mitochondria’ ROBERT E. BEYER2 Institute for Enzyme Research, University of Wisconsin, Madison, Wisconsin; and Laboratory of Chemical Biology, Department of Zoology, The University of Michigan, Ann Arbor, Michigan .@104 Received October 24, 1967; accepted November 25, 1967 Phosphoryl transferase, a mitochondrial protein which increases the phosphoryla- tive capacity of poorly phosphorylating submitochondrial particles and catalyzes an ATP-ADP exchange reaction, is phosphorylated during oxidation either of succinate or pyruvate-malate. Inhibitors of oxidative phosphorylation and electron transfer, as well as uncouplers of oxidative phosphorylation, inhibit the phosphorylation of the transferase when phosphorylation is mediated by electron transfer. The protein is also phosphorylated by ATP, the donor group being specifically the terminal phosphate of ATP. The transphosphorylation reaction is not inhibited by inhibitors of electron transfer and coupled phosphorylation, nor by uncouplers of oxidative phosphorylation. The phosphoryl form of the transferase can phosphorylate ADP in the presence of hexokinase, glucose, and magnesium ion, but the transfer is only 50% complete. During this transfer reaction a portion of the protein-bound phos- phate becomes transformed to an acid-stable form. Phosphorus is released from phosphoryl transferase as inorganic orthophosphate at pH 4 and 10 and by heat, but is relatively stable at pH 7.5 at 0”. Hydroxylamine also induces release of protein- bound phosphorus as inorganic phosphate. The possible role of the phosphoryl group of the transferase in oxidative phosphorylation is discussed. In previous repark from this laborat#ory Mn7+) has been described.
    [Show full text]
  • Saccharomyces Cerevisiae Aspartate Kinase Mechanism and Inhibition
    In compliance with the Canadian Privacy Legislation some supporting forms may have been removed from this dissertation. While these forms may be included in the document page count, their removal does not represent any loss of content from the dissertation. Ph.D. Thesis - D. Bareich McMaster University - Department of Biochemistry FUNGAL ASPARTATE KINASE MECHANISM AND INHIBITION By DAVID C. BAREICH, B.Sc. A Thesis Submitted to the School of Graduate Studies in Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy McMaster University © Copyright by David C. Bareich, June 2003 1 Ph.D. Thesis - D. Bareich McMaster University - Department of Biochemistry FUNGAL ASPARTATE KINASE MECHANISM AND INHIBITION Ph.D. Thesis - D. Bareich McMaster University - Department of Biochemistry DOCTOR OF PHILOSOPHY (2003) McMaster University (Biochemistry) Hamilton, Ontario TITLE: Saccharomyces cerevisiae aspartate kinase mechanism and inhibition AUTHOR: David Christopher Bareich B.Sc. (University of Waterloo) SUPERVISOR: Professor Gerard D. Wright NUMBER OF PAGES: xix, 181 11 Ph.D. Thesis - D. Bareich McMaster University - Department of Biochemistry ABSTRACT Aspartate kinase (AK) from Saccharomyces cerevisiae (AKsc) catalyzes the first step in the aspartate pathway responsible for biosynthesis of L-threonine, L-isoleucine, and L-methionine in fungi. Little was known about amino acids important for AKsc substrate binding and catalysis. Hypotheses about important amino acids were tested using site directed mutagenesis to substitute these amino acids with others having different properties. Steady state kinetic parameters and pH titrations of the variant enzymes showed AKsc-K18 and H292 to be important for binding and catalysis. Little was known about how the S. cerevisiae aspartate pathway kinases, AKsc and homoserine kinase (HSKsc), catalyze the transfer of the y-phosphate from adenosine triphosphate (ATP) to L-aspartate or L-homoserine, respectively.
    [Show full text]
  • Chem331 Glycogen Metabolism
    Glycogen metabolism Glycogen review - 1,4 and 1,6 α-glycosidic links ~ every 10 sugars are branched - open helix with many non-reducing ends. Effective storage of glucose Glucose storage Liver glycogen 4.0% 72 g Muscle glycogen 0.7% 245 g Blood Glucose 0.1% 10 g Large amount of water associated with glycogen - 0.5% of total weight Glycogen stored in granules in cytosol w/proteins for synthesis, degradation and control There are very different means of control of glycogen metabolism between liver and muscle Glycogen biosynthetic and degradative cycle Two different pathways - which do not share enzymes like glycolysis and gluconeogenesis glucose -> glycogen glycogenesis - biosynthetic glycogen -> glucose 1-P glycogenolysis - breakdown Evidence for two paths - Patients lacking phosphorylase can still synthesize glycogen - hormonal regulation of both directions Glycogenolysis (glycogen breakdown)- Glycogen Phosphorylase glycogen (n) + Pi -> glucose 1-p + glycogen (n-1) • Enzyme binds and cleaves glycogen into monomers at the end of the polymer (reducing ends of glycogen) • Dimmer interacting at the N-terminus. • rate limiting - controlled step in glycogen breakdown • glycogen phosphorylase - cleavage of 1,4 α glycosidic bond by Pi NOT H2O • Energy of phosphorolysis vs. hydrolysis -low standard state free energy change -transfer potential -driven by Pi concentration -Hydrolysis would require additional step s/ cost of ATP - Think of the difference between adding a phosphate group with hydrolysis • phosphorylation locks glucose in cell (imp. for muscle) • Phosphorylase binds glycogen at storage site and the catalytic site is 4 to 5 glucose residues away from the catalytic site. • Phosphorylase removes 1 residue at a time from glycogen until 4 glucose residues away on either side of 1,6 branch point – stericaly hindered by glycogen storage site • Cleaves without releasing at storage site • general acid/base catalysts • Inorganic phosphate attacks the terminal glucose residue passing through an oxonium ion intermediate.
    [Show full text]
  • Data Mining of the Transcriptome of Plasmodium Falciparum: the Pentose Phosphate Pathway and Ancillary Processes Zbynek Bozdech1 and Hagai Ginsburg*2
    Malaria Journal BioMed Central Research Open Access Data mining of the transcriptome of Plasmodium falciparum: the pentose phosphate pathway and ancillary processes Zbynek Bozdech1 and Hagai Ginsburg*2 Address: 1School of Biological Sciences, Nanyang Technological University, 637551 Singapore and 2Department of Biological Chemistry, Institute of Life Sciences, The Hebrew University of Jerusalem, Jerusalem 91904, Israel Email: Zbynek Bozdech - [email protected]; Hagai Ginsburg* - [email protected] * Corresponding author Published: 18 March 2005 Received: 15 January 2005 Accepted: 18 March 2005 Malaria Journal 2005, 4:17 doi:10.1186/1475-2875-4-17 This article is available from: http://www.malariajournal.com/content/4/1/17 © 2005 Bozdech and Ginsburg; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Abstract The general paradigm that emerges from the analysis of the transcriptome of the malaria parasite Plasmodium falciparum is that the expression clusters of genes that code for enzymes engaged in the same cellular function is coordinated. Here the consistency of this perception is examined by analysing specific pathways that metabolically-linked. The pentose phosphate pathway (PPP) is a fundamental element of cell biochemistry since it is the major pathway for the recycling of NADP+ to NADPH and for the production of ribose-5-phosphate that is needed for the synthesis of nucleotides. The function of PPP depends on the synthesis of NADP+ and thiamine pyrophosphate, a co-enzyme of the PPP enzyme transketolase.
    [Show full text]