Description of a New Species of Microstoma (Pisces, Microstomatidae) from the Southwestern Pacific Ocean
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CHECKLIST and BIOGEOGRAPHY of FISHES from GUADALUPE ISLAND, WESTERN MEXICO Héctor Reyes-Bonilla, Arturo Ayala-Bocos, Luis E
ReyeS-BONIllA eT Al: CheCklIST AND BIOgeOgRAphy Of fISheS fROm gUADAlUpe ISlAND CalCOfI Rep., Vol. 51, 2010 CHECKLIST AND BIOGEOGRAPHY OF FISHES FROM GUADALUPE ISLAND, WESTERN MEXICO Héctor REyES-BONILLA, Arturo AyALA-BOCOS, LUIS E. Calderon-AGUILERA SAúL GONzáLEz-Romero, ISRAEL SáNCHEz-ALCántara Centro de Investigación Científica y de Educación Superior de Ensenada AND MARIANA Walther MENDOzA Carretera Tijuana - Ensenada # 3918, zona Playitas, C.P. 22860 Universidad Autónoma de Baja California Sur Ensenada, B.C., México Departamento de Biología Marina Tel: +52 646 1750500, ext. 25257; Fax: +52 646 Apartado postal 19-B, CP 23080 [email protected] La Paz, B.C.S., México. Tel: (612) 123-8800, ext. 4160; Fax: (612) 123-8819 NADIA C. Olivares-BAñUELOS [email protected] Reserva de la Biosfera Isla Guadalupe Comisión Nacional de áreas Naturales Protegidas yULIANA R. BEDOLLA-GUzMáN AND Avenida del Puerto 375, local 30 Arturo RAMíREz-VALDEz Fraccionamiento Playas de Ensenada, C.P. 22880 Universidad Autónoma de Baja California Ensenada, B.C., México Facultad de Ciencias Marinas, Instituto de Investigaciones Oceanológicas Universidad Autónoma de Baja California, Carr. Tijuana-Ensenada km. 107, Apartado postal 453, C.P. 22890 Ensenada, B.C., México ABSTRACT recognized the biological and ecological significance of Guadalupe Island, off Baja California, México, is Guadalupe Island, and declared it a Biosphere Reserve an important fishing area which also harbors high (SEMARNAT 2005). marine biodiversity. Based on field data, literature Guadalupe Island is isolated, far away from the main- reviews, and scientific collection records, we pres- land and has limited logistic facilities to conduct scien- ent a comprehensive checklist of the local fish fauna, tific studies. -
Updated Checklist of Marine Fishes (Chordata: Craniata) from Portugal and the Proposed Extension of the Portuguese Continental Shelf
European Journal of Taxonomy 73: 1-73 ISSN 2118-9773 http://dx.doi.org/10.5852/ejt.2014.73 www.europeanjournaloftaxonomy.eu 2014 · Carneiro M. et al. This work is licensed under a Creative Commons Attribution 3.0 License. Monograph urn:lsid:zoobank.org:pub:9A5F217D-8E7B-448A-9CAB-2CCC9CC6F857 Updated checklist of marine fishes (Chordata: Craniata) from Portugal and the proposed extension of the Portuguese continental shelf Miguel CARNEIRO1,5, Rogélia MARTINS2,6, Monica LANDI*,3,7 & Filipe O. COSTA4,8 1,2 DIV-RP (Modelling and Management Fishery Resources Division), Instituto Português do Mar e da Atmosfera, Av. Brasilia 1449-006 Lisboa, Portugal. E-mail: [email protected], [email protected] 3,4 CBMA (Centre of Molecular and Environmental Biology), Department of Biology, University of Minho, Campus de Gualtar, 4710-057 Braga, Portugal. E-mail: [email protected], [email protected] * corresponding author: [email protected] 5 urn:lsid:zoobank.org:author:90A98A50-327E-4648-9DCE-75709C7A2472 6 urn:lsid:zoobank.org:author:1EB6DE00-9E91-407C-B7C4-34F31F29FD88 7 urn:lsid:zoobank.org:author:6D3AC760-77F2-4CFA-B5C7-665CB07F4CEB 8 urn:lsid:zoobank.org:author:48E53CF3-71C8-403C-BECD-10B20B3C15B4 Abstract. The study of the Portuguese marine ichthyofauna has a long historical tradition, rooted back in the 18th Century. Here we present an annotated checklist of the marine fishes from Portuguese waters, including the area encompassed by the proposed extension of the Portuguese continental shelf and the Economic Exclusive Zone (EEZ). The list is based on historical literature records and taxon occurrence data obtained from natural history collections, together with new revisions and occurrences. -
Biomonitoring of Marine Vertebrates in Monterey Bay Using Edna Metabarcoding
RESEARCH ARTICLE Biomonitoring of marine vertebrates in Monterey Bay using eDNA metabarcoding Elizabeth A. Andruszkiewicz1, Hilary A. Starks2, Francisco P. Chavez3, Lauren M. Sassoubre1¤, Barbara A. Block4, Alexandria B. Boehm1* 1 Department of Civil and Environmental Engineering, Stanford University, Stanford, CA, United States of America, 2 Center for Ocean Solutions, Stanford University, Stanford, CA, United States of America, 3 Monterey Bay Aquarium Research Institute, Moss Landing, CA, United States of America, 4 Department of Biology, Hopkins Marine Station, Stanford University, Pacific Grove, CA, United States of America a1111111111 ¤ Current address: Department of Civil, Structural, and Environmental Engineering, University at Buffalo, The a1111111111 State University of New York, Buffalo, NY, United States of America a1111111111 * [email protected] a1111111111 a1111111111 Abstract Molecular analysis of environmental DNA (eDNA) can be used to assess vertebrate biodi- versity in aquatic systems, but limited work has applied eDNA technologies to marine OPEN ACCESS waters. Further, there is limited understanding of the spatial distribution of vertebrate eDNA Citation: Andruszkiewicz EA, Starks HA, Chavez FP, in marine waters. Here, we use an eDNA metabarcoding approach to target and amplify a Sassoubre LM, Block BA, Boehm AB (2017) Biomonitoring of marine vertebrates in Monterey hypervariable region of the mitochondrial 12S rRNA gene to characterize vertebrate com- Bay using eDNA metabarcoding. PLoS ONE 12(4): munities at 10 oceanographic stations spanning 45 km within the Monterey Bay National e0176343. https://doi.org/10.1371/journal. Marine Sanctuary (MBNMS). In this study, we collected three biological replicates of small pone.0176343 volume water samples (1 L) at 2 depths at each of the 10 stations. -
Mediterranean Sea
OVERVIEW OF THE CONSERVATION STATUS OF THE MARINE FISHES OF THE MEDITERRANEAN SEA Compiled by Dania Abdul Malak, Suzanne R. Livingstone, David Pollard, Beth A. Polidoro, Annabelle Cuttelod, Michel Bariche, Murat Bilecenoglu, Kent E. Carpenter, Bruce B. Collette, Patrice Francour, Menachem Goren, Mohamed Hichem Kara, Enric Massutí, Costas Papaconstantinou and Leonardo Tunesi MEDITERRANEAN The IUCN Red List of Threatened Species™ – Regional Assessment OVERVIEW OF THE CONSERVATION STATUS OF THE MARINE FISHES OF THE MEDITERRANEAN SEA Compiled by Dania Abdul Malak, Suzanne R. Livingstone, David Pollard, Beth A. Polidoro, Annabelle Cuttelod, Michel Bariche, Murat Bilecenoglu, Kent E. Carpenter, Bruce B. Collette, Patrice Francour, Menachem Goren, Mohamed Hichem Kara, Enric Massutí, Costas Papaconstantinou and Leonardo Tunesi The IUCN Red List of Threatened Species™ – Regional Assessment Compilers: Dania Abdul Malak Mediterranean Species Programme, IUCN Centre for Mediterranean Cooperation, calle Marie Curie 22, 29590 Campanillas (Parque Tecnológico de Andalucía), Málaga, Spain Suzanne R. Livingstone Global Marine Species Assessment, Marine Biodiversity Unit, IUCN Species Programme, c/o Conservation International, Arlington, VA 22202, USA David Pollard Applied Marine Conservation Ecology, 7/86 Darling Street, Balmain East, New South Wales 2041, Australia; Research Associate, Department of Ichthyology, Australian Museum, Sydney, Australia Beth A. Polidoro Global Marine Species Assessment, Marine Biodiversity Unit, IUCN Species Programme, Old Dominion University, Norfolk, VA 23529, USA Annabelle Cuttelod Red List Unit, IUCN Species Programme, 219c Huntingdon Road, Cambridge CB3 0DL,UK Michel Bariche Biology Departement, American University of Beirut, Beirut, Lebanon Murat Bilecenoglu Department of Biology, Faculty of Arts and Sciences, Adnan Menderes University, 09010 Aydin, Turkey Kent E. Carpenter Global Marine Species Assessment, Marine Biodiversity Unit, IUCN Species Programme, Old Dominion University, Norfolk, VA 23529, USA Bruce B. -
Evolution and Ecology in Widespread Acoustic Signaling Behavior Across Fishes
bioRxiv preprint doi: https://doi.org/10.1101/2020.09.14.296335; this version posted September 14, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 1 Evolution and Ecology in Widespread Acoustic Signaling Behavior Across Fishes 2 Aaron N. Rice1*, Stacy C. Farina2, Andrea J. Makowski3, Ingrid M. Kaatz4, Philip S. Lobel5, 3 William E. Bemis6, Andrew H. Bass3* 4 5 1. Center for Conservation Bioacoustics, Cornell Lab of Ornithology, Cornell University, 159 6 Sapsucker Woods Road, Ithaca, NY, USA 7 2. Department of Biology, Howard University, 415 College St NW, Washington, DC, USA 8 3. Department of Neurobiology and Behavior, Cornell University, 215 Tower Road, Ithaca, NY 9 USA 10 4. Stamford, CT, USA 11 5. Department of Biology, Boston University, 5 Cummington Street, Boston, MA, USA 12 6. Department of Ecology and Evolutionary Biology and Cornell University Museum of 13 Vertebrates, Cornell University, 215 Tower Road, Ithaca, NY, USA 14 15 ORCID Numbers: 16 ANR: 0000-0002-8598-9705 17 SCF: 0000-0003-2479-1268 18 WEB: 0000-0002-5669-2793 19 AHB: 0000-0002-0182-6715 20 21 *Authors for Correspondence 22 ANR: [email protected]; AHB: [email protected] 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.09.14.296335; this version posted September 14, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. -
HANDBOOK of FISH BIOLOGY and FISHERIES Volume 1 Also Available from Blackwell Publishing: Handbook of Fish Biology and Fisheries Edited by Paul J.B
HANDBOOK OF FISH BIOLOGY AND FISHERIES Volume 1 Also available from Blackwell Publishing: Handbook of Fish Biology and Fisheries Edited by Paul J.B. Hart and John D. Reynolds Volume 2 Fisheries Handbook of Fish Biology and Fisheries VOLUME 1 FISH BIOLOGY EDITED BY Paul J.B. Hart Department of Biology University of Leicester AND John D. Reynolds School of Biological Sciences University of East Anglia © 2002 by Blackwell Science Ltd a Blackwell Publishing company Chapter 8 © British Crown copyright, 1999 BLACKWELL PUBLISHING 350 Main Street, Malden, MA 02148‐5020, USA 108 Cowley Road, Oxford OX4 1JF, UK 550 Swanston Street, Carlton, Victoria 3053, Australia The right of Paul J.B. Hart and John D. Reynolds to be identified as the Authors of the Editorial Material in this Work has been asserted in accordance with the UK Copyright, Designs, and Patents Act 1988. All rights reserved. No part of this publication may be reproduced, stored in a retrieval system, or transmitted, in any form or by any means, electronic, mechanical, photocopying, recording or otherwise, except as permitted by the UK Copyright, Designs, and Patents Act 1988, without the prior permission of the publisher. First published 2002 Reprinted 2004 Library of Congress Cataloging‐in‐Publication Data has been applied for. Volume 1 ISBN 0‐632‐05412‐3 (hbk) Volume 2 ISBN 0‐632‐06482‐X (hbk) 2‐volume set ISBN 0‐632‐06483‐8 A catalogue record for this title is available from the British Library. Set in 9/11.5 pt Trump Mediaeval by SNP Best‐set Typesetter Ltd, Hong Kong Printed and bound in the United Kingdom by TJ International Ltd, Padstow, Cornwall. -
Origin and Phylogenetic Interrelationships of Teleosts Honoring Gloria Arratia
Origin and Phylogenetic Interrelationships of Teleosts Honoring Gloria Arratia Joseph S. Nelson, Hans-Peter Schultze & Mark V. H. Wilson (editors) TELEOSTEOMORPHA TELEOSTEI TELEOCEPHALA s. str. Leptolepis Pholidophorus † Lepisosteus Amia †? †? † †Varasichthyidae †Ichthyodectiformes Elopidae More advanced teleosts crown- group apomorphy-based group stem-based group Verlag Dr. Friedrich Pfeil • München Contents Preface ................................................................................................................................................................ 7 Acknowledgments ........................................................................................................................................... 9 Gloria Arratia’s contribution to our understanding of lower teleostean phylogeny and classifi cation – Joseph S. Nelson ....................................................................................... 11 The case for pycnodont fi shes as the fossil sister-group of teleosts – J. Ralph Nursall ...................... 37 Phylogeny of teleosts based on mitochondrial genome sequences – Richard E. Broughton ............. 61 Occipito-vertebral fusion in actinopterygians: conjecture, myth and reality. Part 1: Non-teleosts – Ralf Britz and G. David Johnson ................................................................................................................... 77 Occipito-vertebral fusion in actinopterygians: conjecture, myth and reality. Part 2: Teleosts – G. David Johnson and Ralf Britz .................................................................................................................. -
Bayesian Node Dating Based on Probabilities of Fossil Sampling Supports Trans-Atlantic Dispersal of Cichlid Fishes
Supporting Information Bayesian Node Dating based on Probabilities of Fossil Sampling Supports Trans-Atlantic Dispersal of Cichlid Fishes Michael Matschiner,1,2y Zuzana Musilov´a,2,3 Julia M. I. Barth,1 Zuzana Starostov´a,3 Walter Salzburger,1,2 Mike Steel,4 and Remco Bouckaert5,6y Addresses: 1Centre for Ecological and Evolutionary Synthesis (CEES), Department of Biosciences, University of Oslo, Oslo, Norway 2Zoological Institute, University of Basel, Basel, Switzerland 3Department of Zoology, Faculty of Science, Charles University in Prague, Prague, Czech Republic 4Department of Mathematics and Statistics, University of Canterbury, Christchurch, New Zealand 5Department of Computer Science, University of Auckland, Auckland, New Zealand 6Computational Evolution Group, University of Auckland, Auckland, New Zealand yCorresponding author: E-mail: [email protected], [email protected] 1 Supplementary Text 1 1 Supplementary Text Supplementary Text S1: Sequencing protocols. Mitochondrial genomes of 26 cichlid species were amplified by long-range PCR followed by the 454 pyrosequencing on a GS Roche Junior platform. The primers for long-range PCR were designed specifically in the mitogenomic regions with low interspecific variability. The whole mitogenome of most species was amplified as three fragments using the following primer sets: for the region between position 2 500 bp and 7 300 bp (of mitogenome starting with tRNA-Phe), we used forward primers ZM2500F (5'-ACG ACC TCG ATG TTG GAT CAG GAC ATC C-3'), L2508KAW (Kawaguchi et al. 2001) or S-LA-16SF (Miya & Nishida 2000) and reverse primer ZM7350R (5'-TTA AGG CGT GGT CGT GGA AGT GAA GAA G-3'). The region between 7 300 bp and 12 300 bp was amplified using primers ZM7300F (5'-GCA CAT CCC TCC CAA CTA GGW TTT CAA GAT GC-3') and ZM12300R (5'-TTG CAC CAA GAG TTT TTG GTT CCT AAG ACC-3'). -
Origin and Phylogenetic Interrelationships of Teleosts Honoring Gloria Arratia
Origin and Phylogenetic Interrelationships of Teleosts Honoring Gloria Arratia Joseph S. Nelson, Hans-Peter Schultze & Mark V. H. Wilson (editors) TELEOSTEOMORPHA TELEOSTEI TELEOCEPHALA s. str. Leptolepis Pholidophorus † Lepisosteus Amia †? †? † †Varasichthyidae †Ichthyodectiformes Elopidae More advanced teleosts crown- group apomorphy-based group stem-based group Verlag Dr. Friedrich Pfeil • München Contents Preface ................................................................................................................................................................ 7 Acknowledgments ........................................................................................................................................... 9 Gloria Arratia’s contribution to our understanding of lower teleostean phylogeny and classifi cation – Joseph S. Nelson ....................................................................................... 11 The case for pycnodont fi shes as the fossil sister-group of teleosts – J. Ralph Nursall ...................... 37 Phylogeny of teleosts based on mitochondrial genome sequences – Richard E. Broughton ............. 61 Occipito-vertebral fusion in actinopterygians: conjecture, myth and reality. Part 1: Non-teleosts – Ralf Britz and G. David Johnson ................................................................................................................... 77 Occipito-vertebral fusion in actinopterygians: conjecture, myth and reality. Part 2: Teleosts – G. David Johnson and Ralf Britz .................................................................................................................. -
Fishes of the World
Fishes of the World Fishes of the World Fifth Edition Joseph S. Nelson Terry C. Grande Mark V. H. Wilson Cover image: Mark V. H. Wilson Cover design: Wiley This book is printed on acid-free paper. Copyright © 2016 by John Wiley & Sons, Inc. All rights reserved. Published by John Wiley & Sons, Inc., Hoboken, New Jersey. Published simultaneously in Canada. No part of this publication may be reproduced, stored in a retrieval system, or transmitted in any form or by any means, electronic, mechanical, photocopying, recording, scanning, or otherwise, except as permitted under Section 107 or 108 of the 1976 United States Copyright Act, without either the prior written permission of the Publisher, or authorization through payment of the appropriate per-copy fee to the Copyright Clearance Center, 222 Rosewood Drive, Danvers, MA 01923, (978) 750-8400, fax (978) 646-8600, or on the web at www.copyright.com. Requests to the Publisher for permission should be addressed to the Permissions Department, John Wiley & Sons, Inc., 111 River Street, Hoboken, NJ 07030, (201) 748-6011, fax (201) 748-6008, or online at www.wiley.com/go/permissions. Limit of Liability/Disclaimer of Warranty: While the publisher and author have used their best efforts in preparing this book, they make no representations or warranties with the respect to the accuracy or completeness of the contents of this book and specifically disclaim any implied warranties of merchantability or fitness for a particular purpose. No warranty may be createdor extended by sales representatives or written sales materials. The advice and strategies contained herein may not be suitable for your situation. -
Table 1.1 the Diversity of Living Fishes
Table 1.1 The diversity of living fishes. Below is a brief listing of higher taxonomic categories of living fishes, in phylogenetic order. This list is meant as an introduction to major groups of living fishes as they will be discussed in the initial two sections of this book. Many intermediate taxonomic levels, such as infraclasses, subdivisions, and series, are not presented here; they will be detailed when the actual groups are discussed in Part III. Only a few representatives of interesting or diverse groups are listed. Taxa and illustrations from Nelson (2006). Subphylum Cephalochordata – lancelets Subphylum Craniata Superclass Myxinomorphi Class Myxini – hagfishes Superclass Petromyzontomorphi Class Petromyzontida – lampreys Superclass Gnathostomata – jawed fishes Class Chondrichthyes – cartilaginous fishes Subclass Elasmobranchii – sharklike fishes Subclass Holocephali – chimaeras Grade Teleostomi – bony fishes Class Sarcopterygii – lobe-finned fishes Subclass Coelacanthimorpha – coelacanths Subclass Dipnoi – lungfishes Class Actinopterygii – ray-finned fishes Subclass Cladistia – bichirs Subclass Chondrostei – paddlefishes, sturgeons Subclass Neopterygii – modern bony fishes, including gars and bowfina Division Teleostei Subdivision Osteoglossomorpha – bonytongues Subdivision Elopomorpha – tarpons, bonefishes, eels Subdivision Otocephala Superorder Clupeomorpha – herrings Superorder Ostariophysi – minnows, suckers, characins, loaches, catfishes Subdivision Euteleostei – advanced bony fishes Superorder Protacanthopterygii – pickerels, -
The Evolution of Fangs Across Ray-Finned Fishes (Actinopterygii)
St. Cloud State University theRepository at St. Cloud State Culminating Projects in Biology Department of Biology 5-2017 The volutE ion of Fangs Across Ray-Finned Fishes (Actinopterygii) Emily Olson St. Cloud State University, [email protected] Follow this and additional works at: https://repository.stcloudstate.edu/biol_etds Recommended Citation Olson, Emily, "The vE olution of Fangs Across Ray-Finned Fishes (Actinopterygii)" (2017). Culminating Projects in Biology. 22. https://repository.stcloudstate.edu/biol_etds/22 This Thesis is brought to you for free and open access by the Department of Biology at theRepository at St. Cloud State. It has been accepted for inclusion in Culminating Projects in Biology by an authorized administrator of theRepository at St. Cloud State. For more information, please contact [email protected]. The Evolution of Fangs Across Ray-Finned Fishes (Actinopterygii) by Emily E. Olson A Thesis Submitted to the Graduate Faculty of St. Cloud State University in Partial Fulfillment of the Requirements for the Degree Master of Science in Ecology and Natural Resources April, 2017 Thesis Committee: Matthew Davis, Chairperson Heiko Schoenfuss Matthew Tornow 2 Abstract To date, no study has investigated how many independent evolutions of fangs have occurred across ray-finned fishes. This research addresses this question by focusing on the evolution of fangs across a diversity of marine habitats in the Lizardfishes (Aulopiformes), and then investigating the evolution of fangs across ray-finned fishes (Actinopterygii). Lizardfishes are a diverse order of fishes (~236 species) that are observed to have fang-like teeth and occupy a variety of marine habitats. A taxonomic review of lizardfish specimens representing 35 of 44 genera were examined for the presence of fangs.