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Role of the Contractile Vacuole Complex As A ROLE OF THE CONTRACTILE VACUOLE COMPLEX AS A TRAFFICKING HUB IN TRYPANOSOMA CRUZI by SAYANTANEE NIYOGI (Under the Direction of Roberto Docampo) ABSTRACT Trypanosoma cruzi is the etiologic agent of Chagas disease. It contains a Contractile Vacuole Complex (CVC) that plays a vital role in the regulation of its cell volume and in its responses to osmotic stresses in all its life cycle stages. It is peculiar that though, T.cruzi is not a free-living organism it has a CVC; thus suggesting that the CVC could have functions beyond just osmoregulation as occurs in some other protists; where the CVC is involved in regulating calcium homeostasis and in the transfer of proteins to the surface. Besides, the approach of combined proteomic and bioinformatics analyses identified proteins localized to the CVC, several of them having trafficking roles, and implying to a potential novel role of the CVC. Here we used a combination of genetic and biochemical approaches to establish the contribution of the CVC as a trafficking hub. T. cruzi relies on protein secretion of glycosylphosphatidylinositol (GPI)-anchored surface proteins for invasion of host cells and establishment of infection. In this study we show that the CVC acts as a trafficking intermediate before GPI-anchored proteins reach the cell surface. Additionally we also identify CVC-located TcRab11 as a regulator of protein transport of GPI-anchored trans- sialidase to the plasma membrane, a process essential for the establishment of infection. Demonstration of the role of TcTS in infection has been previously difficult given the large number of genes encoding for this protein distributed through the genome of the parasite. We also studied the role of another CVC-located Rab. Rab32 is located in lysosome-related organelles (LRO) and since acidocalcisomes are LROs we investigated whether TcRab32 is needed for the structure and function of acidocalcisomes. By constructing GDP-bound dominant negative mutants of TcRab32 we were able to show a defect in trafficking, which ultimately affects parasite infectivity. This study with TcRab32 provides the link between the acidocalcisome and the contractile vacuole complex as observed in T. cruzi and in some other protists like Chlamydomonas reinhardtii and Dictyostelium discoideum. Our results are consistent with a role of the CVC in regulating membrane traffic to maintain the function of the acidocalcisome as well as traffic to the plasma membrane of T. cruzi. INDEX WORDS: T.cruzi, Contractile Vacuole Complex (CVC), acidocalcisomes, TcRab32, TcRab11, trans-sialidase, trafficking, membrane ROLE OF THE CONTRACTILE VACUOLE COMPLEX AS A TRAFFICKING HUB IN TRYPANOSOMA CRUZI by SAYANTANEE NIYOGI BSc., Asutosh College, Kolkata, India, 2006 MSc., University of Calcutta, Kolkata, India, 2008 A Dissertation Submitted to the Graduate Faculty of The University of Georgia in Partial Fulfillment of the Requirements for the Degree DOCTOR OF PHILOSOPHY ATHENS, GEORGIA 2014 © 2014 SAYANTANEE NIYOGI All Rights Reserved ROLE OF THE CONTRACTILE VACUOLE COMPLEX AS A TRAFFICKING HUB IN TRYPANOSOMA CRUZI by SAYANTANEE NIYOGI Major Professor: Roberto Docampo Committee: Boris Striepen Rick Tarleton Steve Hajduk Electronic Version Approved: Julie Coffield Interim Dean of the Graduate School The University of Georgia August 2014 iv DEDICATION Dedicated to Maa, Baba, Titli and Deep for their constant encouragement, support and unconditional love. v ACKNOWLEDGEMENTS I would like to thank my mentor Dr Docampo for the opportunity, the support, the time and patience he provided for me and the great projects he had lined up for me. He had to start right from scratch with me!! When I joined the lab, I did not have a lot of experience on the bench, in designing experiments. But thanks to him, I think I have become slightly better at it. I thank him for all that he has taught me, all the knowledge he imparted on me and guiding me all along. His love for science, his dedication to work has been an inspiration to me; that helped me to work hard on my projects with full sincerity. He has always been keen on answering my doubts, correcting my mistakes and also making sure that I do not repeat those mistakes. He always encouraged me to present my work both in external meetings as well as in internal seminars; something that has helped boost my level of confidence. I would also like to thank Dr Moreno for all her invaluable suggestions during lab meeting; which definitely made my dissertation a lot more solid. Also her review whenever I presented during a lab meeting or practiced for an upcoming seminar with her; is invaluable. I think I have learnt a lot about how important it is to be able to present your work and make sure that people can follow the talk from these discussions. Also I would like to thank my committee members Dr Striepen, Dr Tarleton and Dr Hajduk whose advice and suggestion added value to my thesis and towards the flow of the project. Thanks to Veronica who trained me in my first year and for her positive criticizm. I am and will be ever grateful to Melina for being the best lab manager and being a great vi friend; for always answering my questions and always encouraging me in the toughest of time. Thanks to Noelia who is a great friend and a wonderful labmate; she helped answer some of my doubts regarding the writing of the dissertation. And everyone else in the Docampo-Moreno lab; an environment that always inspired and taught me to work hard, help each other, to work together as a unit, discuss and share problems; and also taught me how important it is to recognize everyone’s contribution and also to be able to critically review each other’s as well as your own work. I can undoubtedly say these were the best 5 years of my life!! A big thank you to my parents; for giving us the best education and the best childhood. And most importantly making sure that we become nice human beings; something that I will carry with me wherever I go. They have made countless sacrifices to support me and my sister and give us a life which I know was very difficult for them to provide at the moment. My sister, for being my biggest cheerleader and for all the love she gives me. Though I am the elder one, but her wisdom and mature suggestions have definitely taught me a lot in life. Thank you to my brother-in-law who is more like my own brother; for all the encouragement, the sense of humor you keep pouring in at difficult times which always manages to bring a smile to my face on those days, when going gets tough. My gratitude to my parents-in-law for being understanding and very supportive throughout. And a big thank you to my husband for being my strength. Words will never do justice to what you mean to me. Thank you for being by my side, for backing me up when I fall down, for respecting my space and also being my biggest critique. You have indeed been my guide, my teacher and my best friend. Surprisingly all my worries disappeared after I vii came back home to him. The support and love from my family has been my biggest strength and instrumental in whatever I have been able to achieve. viii TABLE OF CONTENTS Page ACKNOWLEDGEMENTS v LIST OF FIGURES xi CHAPTER 1 INTRODUCTION………………………………………………………………….1 Introduction…………………………………………………………………………….…...1 Structure of the Dissertation……………………………………………..…………………3 References ……………………………………………………………………….…………4 2 LITERATURE REVIEW…………………………………………………………..5 Trypanosoma cruzi and Chagas disease ……………………………………………………5 Life cycle of Trypanosoma cruzi …………………………………………………………..6 Contractile Vacuole Complex………………………………………………………………7 Acidocalcisomes…………………………………………………………………………..10 Traffic in trypanosomes…………………………………………………………………...13 Rab proteins………………………………………………………….……………………15 Tools to investigate the function of Rab proteins in vesicle fusion and transport mechanism……………………………………………………………………....16 GDP bound “OFF” stage of Rab proteins: examples……………………………………..18 Role of Rab32 protein in trafficking……………………………………………………...18 Role of Rab11 protein in trafficking………………………………………………………19 ix Rab protein prenylation and potential treatment of Chagas disease………………………20 Overview of Trypanosoma cruzi infection……………………………………………......21 GPI-anchored surface proteins…………………………………………………………....23 Trans-sialidase…………………………………………………………………………....24 References………………………………………………………………………………...27 3 RAB11 REGULATES TRAFFICKING OF TRANS-SIALIDASE TO THE PLASMA MEMBRANE THROUGH THE CONTRACTILE VACUOLE COMPLEX OF TRYPANOSOMA CRUZI ………………………………………………..45 Abstract……………………………………………………………………………………46 Author Summary…………………………………………………………………………..47 Introduction……………………………………………………………………………..…47 Results …………………………………………………………………………………….50 Discussion…………………………………………………………………………………59 Materials and Methods….………………………………………………………………...64 References………………………………………………………………………………...73 4 RAB32 IS ESSENTIAL FOR MAINTAINING FUNCTIONAL ACIDOCALCISOMES AND FOR GROWTH AND VIRULENCE OF TRYPANOSOMA CRUZI……………………………………………101 Abstract………………………………………………………………………………..…102 Author Summary ………………………………………………………………………...102 Introduction………………………………………………………………………………103 Results……………………………………………………………………………………105 Discussion……………………………………………………………………………......111 x Materials and methods…………………………………………………………………...113 References ……………………………………………………………………………….121 5 CONCLUSION…………………………………………………………………..139 Summary of key finding…………………………………………………………………139 Future work………………………………………………………………………………141 References ……………………………………………………………………………….147 xi LIST OF FIGURES Page Figure 2.1: Life cycle of T. cruzi…………………………………………………………………39
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