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Diversity and Phylogeography of Southern Ocean Sea Stars (Asteroidea)
Diversity and phylogeography of Southern Ocean sea stars (Asteroidea) Thesis submitted by Camille MOREAU in fulfilment of the requirements of the PhD Degree in science (ULB - “Docteur en Science”) and in life science (UBFC – “Docteur en Science de la vie”) Academic year 2018-2019 Supervisors: Professor Bruno Danis (Université Libre de Bruxelles) Laboratoire de Biologie Marine And Dr. Thomas Saucède (Université Bourgogne Franche-Comté) Biogéosciences 1 Diversity and phylogeography of Southern Ocean sea stars (Asteroidea) Camille MOREAU Thesis committee: Mr. Mardulyn Patrick Professeur, ULB Président Mr. Van De Putte Anton Professeur Associé, IRSNB Rapporteur Mr. Poulin Elie Professeur, Université du Chili Rapporteur Mr. Rigaud Thierry Directeur de Recherche, UBFC Examinateur Mr. Saucède Thomas Maître de Conférences, UBFC Directeur de thèse Mr. Danis Bruno Professeur, ULB Co-directeur de thèse 2 Avant-propos Ce doctorat s’inscrit dans le cadre d’une cotutelle entre les universités de Dijon et Bruxelles et m’aura ainsi permis d’élargir mon réseau au sein de la communauté scientifique tout en étendant mes horizons scientifiques. C’est tout d’abord grâce au programme vERSO (Ecosystem Responses to global change : a multiscale approach in the Southern Ocean) que ce travail a été possible, mais aussi grâce aux collaborations construites avant et pendant ce travail. Cette thèse a aussi été l’occasion de continuer à aller travailler sur le terrain des hautes latitudes à plusieurs reprises pour collecter les échantillons et rencontrer de nouveaux collègues. Par le biais de ces trois missions de recherches et des nombreuses conférences auxquelles j’ai activement participé à travers le monde, j’ai beaucoup appris, tant scientifiquement qu’humainement. -
Echinoidea: Diadematidae) to the Mediterranean Coast of Israel
Zootaxa 4497 (4): 593–599 ISSN 1175-5326 (print edition) http://www.mapress.com/j/zt/ Article ZOOTAXA Copyright © 2018 Magnolia Press ISSN 1175-5334 (online edition) https://doi.org/10.11646/zootaxa.4497.4.9 http://zoobank.org/urn:lsid:zoobank.org:pub:268716E0-82E6-47CA-BDB2-1016CE202A93 Needle in a haystack—genetic evidence confirms the expansion of the alien echinoid Diadema setosum (Echinoidea: Diadematidae) to the Mediterranean coast of Israel OMRI BRONSTEIN1,2 & ANDREAS KROH1 1Natural History Museum Vienna, Geological-Paleontological Department, 1010 Vienna, Austria. E-mails: [email protected], [email protected] 2Corresponding author Abstract Diadema setosum (Leske, 1778), a widespread tropical echinoid and key herbivore in shallow water environments is cur- rently expanding in the Mediterranean Sea. It was introduced by unknown means and first observed in southern Turkey in 2006. From there it spread eastwards to Lebanon (2009) and westwards to the Aegean Sea (2014). Since late 2016 spo- radic sightings of black, long-spined sea urchins were reported by recreational divers from rock reefs off the Israeli coast. Numerous attempts to verify these records failed; neither did the BioBlitz Israel task force encounter any D. setosum in their campaigns. Finally, a single adult specimen was observed on June 17, 2017 in a deep rock crevice at 3.5 m depth at Gordon Beach, Tel Aviv. Although the specimen could not be recovered, spine fragments sampled were enough to genet- ically verify the visual underwater identification based on morphology. Sequences of COI, ATP8-Lysine, and the mito- chondrial Control Region of the Israel specimen are identical to those of the specimen collected in 2006 in Turkey, unambiguously assigning the specimen to D. -
Ophiuroids of the Order Euryalida (Echinodermata) from Hachijōjima Island and Ogasawara Islands, Japan
国立科博専報,(47): 367–385,2011年4月15日 Mem. Natl. Mus. Nat. Sci., Tokyo, (47): 367–385, April 15, 2011 Ophiuroids of the Order Euryalida (Echinodermata) from Hachijōjima Island and Ogasawara Islands, Japan Masanori Okanishi1, 2, Kunihisa Yamaguchi3, Yoshihiro Horii4 and Toshihiko Fujita2, 1 1 Department of Biological Science, Graduate School of Science, The University of Tokyo, 7–3–1 Hongō, Bunkyō-ku, Tokyo 113–8654, Japan 2 Department of Zoology, National Museum of Nature and Science, 3–23–1 Hyakunin-cho, Shinjuku-ku, Tokyo 169–0073, Japan E-mail: [email protected] (MO) 3 Ōshima Branch, Tokyo Metropolitan Islands Area Research and Development Center of Agriculture, Forestry and Fisheries, 18 Habuminato, Ōshima-cho, Tokyo 100–0212, Japan 4 Hachijō Branch, Tokyo Metropolitan Islands Area Research and Development Center of Agriculture, Forestry and Fisheries, 4222–1 Mitsune, Hachijō-cho, Hachijōjima, Tokyo 100-1511, Japan Abstract. Ophiuroids of the order Euryalida were collected from the depth between 20 and 1980 m off Hachijōjima Island and off Ogasawara Islands, southern Japan. A total of 17 species (12 genera, 4 families) were identified. Key words: Ophiuroidea, Euryalida, taxonomy, deep sea, Japan. Two hundred and fifty one specimens were newly Introduction collected by the project “Species Diversity of The order Euryalida (Echinodermata: Ophi- Sagami Sea and Adjacent Coastal Areas: Origin uroidea) consists of four families, Asteronychi- of Influential Factors” conducted by the National dae, Asteroschematidae, Euryalidae and Gorgono- Museum of Nature and Science, Tokyo in addi- cephalidae. Euryalid ophiuroids often live on hard tion to 88 specimens already deposited in the Na- bottoms or attach to soft corals and sponges with tional Museum of Nature and Science. -
SI Appendix for Hopkins, Melanie J, and Smith, Andrew B
Hopkins and Smith, SI Appendix SI Appendix for Hopkins, Melanie J, and Smith, Andrew B. Dynamic evolutionary change in post-Paleozoic echinoids and the importance of scale when interpreting changes in rates of evolution. Corrections to character matrix Before running any analyses, we corrected a few errors in the published character matrix of Kroh and Smith (1). Specifically, we removed the three duplicate records of Oligopygus, Haimea, and Conoclypus, and removed characters C51 and C59, which had been excluded from the phylogenetic analysis but mistakenly remain in the matrix that was published in Appendix 2 of (1). We also excluded Anisocidaris, Paurocidaris, Pseudocidaris, Glyphopneustes, Enichaster, and Tiarechinus from the character matrix because these taxa were excluded from the strict consensus tree (1). This left 164 taxa and 303 characters for calculations of rates of evolution and for the principal coordinates analysis. Other tree scaling methods The most basic method for scaling a tree using first appearances of taxa is to make each internal node the age of its oldest descendent ("stand") (2), but this often results in many zero-length branches which are both theoretically questionable and in some cases methodologically problematic (3). Several methods exist for modifying zero-length branches. In the case of the results shown in Figure 1, we assigned a positive length to each zero-length branch by having it share time equally with a preceding, non-zero-length branch (“equal”) (4). However, we compared the results from this method of scaling to several other methods. First, we compared this with rates estimated from trees scaled such that zero-length branches share time proportionally to the amount of character change along the branches (“prop”) (5), a variation which gave almost identical results as the method used for the “equal” method (Fig. -
Fossil Spatangoid Echinoids of Cuba
SMITHSONIAN CONTRIBUTIONS TO PALEOBIOLOGY • NUMBER 55 Fossil Spatangoid Echinoids of Cuba Porter M. Kier SMITHSONIAN INSTITUTION PRESS City of Washington 1984 ABSTRACT Kier, Porter M. Fossil Spatangoid Echinoids of Cuba. Smithsonian Contributions to Paleobiology, number 55, 336 pages, frontispiece, 45 figures, 90 plates, 6 tables, 1984.—The fossil spatangoid echinoids of Cuba are described based for the most part on specimens in the Sanchez Roig Collection. Seventy-nine species are recognized including 10 from the Late Cretaceous, 36 from the Eocene, 20 from the Oligocene-Miocene, 11 from the Miocene, and 2 of uncertain age. Three of the Eocene species are new: Schizas ter forme III, Linthia monteroae, and Antillaster albeari. A new genus of schizasterid is described, Caribbaster, with the Eocene Prenaster loveni Cotteau as the type-species. A new Asterostoma, A. pawsoni, is described from the Eocene of Jamaica. The Eocene age of the Cuban echinoid-bearing localities is confirmed by the presence outside Cuba of many ofthe same species in beds dated on other fossils. Some evidence supports the Miocene determinations, but the echinoids are of little assistance in resolving the question whether the Cuban beds attributed to the Oligocene are Oligocene or Miocene. Cuban, and in general, the Caribbean Tertiary echinoid faunas are distinct from those in Europe and the Mediterranean. Many genera are confined to the Caribbean. The Cuban fauna is also different from that found nearby in Florida. This difference may be due to a suggested greater depth of water in Cuba. Se describen los equinoideos espatangoideos de Cuba, incluyendo los es- pecimenes de la Coleccion Sanchez Roig. -
Anti-Inflammatory Components of the Starfish Astropecten Polyacanthus
Mar. Drugs 2013, 11, 2917-2926; doi:10.3390/md11082917 OPEN ACCESS marine drugs ISSN 1660-3397 www.mdpi.com/journal/marinedrugs Article Anti-Inflammatory Components of the Starfish Astropecten polyacanthus Nguyen Phuong Thao 1,2, Nguyen Xuan Cuong 1, Bui Thi Thuy Luyen 1,2, Tran Hong Quang 1, Tran Thi Hong Hanh 1, Sohyun Kim 3, Young-Sang Koh 3, Nguyen Hoai Nam 1, Phan Van Kiem 1, Chau Van Minh 1 and Young Ho Kim 2,* 1 Institute of Marine Biochemistry, Vietnam Academy of Science and Technology (VAST), 18 Hoang Quoc Viet, Nghiado, Caugiay, Hanoi 10000, Vietnam; E-Mails: [email protected] (N.P.T.); [email protected] (N.X.C.); [email protected] (B.T.T.L.); [email protected] (T.H.Q.); [email protected] (T.T.H.H.); [email protected] (N.H.N.); [email protected] (P.V.K.); [email protected] (C.V.M.) 2 College of Pharmacy, Chungnam National University, Daejeon 305-764, Korea 3 School of Medicine, Brain Korea 21 Program, and Institute of Medical Science, Jeju National University, Jeju 690-756, Korea; E-Mails: [email protected] (S.K.); [email protected] (Y.-S.K.) * Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel.: +82-42-82-5933; Fax: +82-42-823-6566. Received: 20 June 2013; in revised form: 17 July 2013 / Accepted: 19 July 2013 / Published: 13 August 2013 Abstract: Inflammation is important in biomedical research, because it plays a key role in inflammatory diseases including rheumatoid arthritis and other forms of arthritis, diabetes, heart disease, irritable bowel syndrome, Alzheimer’s disease, Parkinson’s disease, allergies, asthma, and even cancer. -
Behaviour As Part of Ecological Adaptation
Helgolgnder wiss. Meeresunters. 24, 120-144 (1973) Behaviour as part of ecological adaptation In situ studies in the coral reef H. W. FRICK~ Max-Planck-Institut ~iir Verhaltensphysiologie (Abteilung Lorenz); Seewiesen und Erling-Andechs, Federal Republic of Germany KURZFASSUNG: Verhalten als Tell 8kologischer Anpassung. In-situ-Untersuchungen im Korallenriff. Der Einflut~ des Lebensraumes als Evolutionsfaktor des Verhaltens l~it~t sich durch Artenvergleich erschliet~en.Verhaltensweisen sind Tell der/SkologischenAnpassung. Nicht verwandte Tiere, die in ~ihnlichenBiotopen leben, zeigen ott Verhaltenskonvergenzen; verwandte Tiere in unterschiedlichen Biotopen dagegen Verhaltensdivergenzen. Im Korallenriff wurden analoge und homologe Verhaltensweisen an den Funktionskreisen Nahrungserwerb (Plankton- fang bei Seeanemonen, kriechenden Kammquatlen, Schlangensternen und R6hrenaalen), Beute- fang und Feindvermeidung (bei einigen benthonischen Invertebraten) und Sozialverhatten (bei Korallenbarschen) untersucht. Auch Sozialstrukturen sind 6kologischeAnpassungen. Monogamie und Plakatfarben der im Rift besonders zahlreich vertretenen Schmettertingsfische werden als Fortpflanzungsisolationsme&anismen interpretiert. Sie erm6glichen das Nebeneinander vieler sympatrischer Arten. INTRODUCTION The environment as a selection factor, and thus one which influences an animal's behaviour, has recently reached importance in modern ethology. Behaviour patterns develop with time and are based on the same evolutionary mechanisms as anatomical structures (WIcKL~I~ -
Ophiuroidea (Echinodermata) from La Coronilla-Cerro Verde (Uruguay): a New Record for the Uruguayan Coast
Ophiuroidea (Echinodermata) from La Coronilla-Cerro Verde (Uruguay): a new record for the Uruguayan coast Carranza, A. et al. Biota Neotropica, Vol.7 (number 3): 2007; p. 103-107. A versão on-line completa deste artigo está disponível em: On line version of this paper is available at: http://www.biotaneotropica.org.br/v7n3/pt/abstract?article+bn01607032007 Recebido em/ Data Received 22/01/07 - Versão reformulada recebida em/ Revised 30/05/07 - Publicado em/ Accepted 06/09/07 ISSN 1676-0603 (on-line) Biota Neotropica é uma revista do Programa BIOTA/FAPESP - O Instituto Virtual da Biodiversidade, que publica resultados de pesquisa original, vinculada ou não ao programa, que abordem a temática caracterização, conservação e uso sustentável da biodiversidade na região Neotropical. Biota Neotropica is an electronic, peer-reviewed journal edited by the Program BIOTA/FAPESP: The Virtual Institute of Biodiversity. This journal’s aim is to disseminate the results of original research work, associated or not to the program, concerned with characterization, conservation and sustainable use of biodiversity within the Neotropical region. A Biota Neotropica é uma revista eletrônica e está integral e gratuitamente disponível no endereço http://www.biotaneotropica.org.br Biota Neotropica is an eletronic journal which is available free at the following site http://www.biotaneotropica.org.br Ophiuroidea (Echinodermata) from La Coronilla-Cerro Verde (Uruguay): a new record for the Uruguayan coast Alvar Carranza1, 2, 4, Michela Borges3, Marcel Rodríguez2 -
Key to the Common Shallow-Water Brittle Stars (Echinodermata: Ophiuroidea) of the Gulf of Mexico and Caribbean Sea
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/228496999 Key to the common shallow-water brittle stars (Echinodermata: Ophiuroidea) of the Gulf of Mexico and Caribbean Sea Article · January 2007 CITATIONS READS 10 702 1 author: Christopher Pomory University of West Florida 34 PUBLICATIONS 303 CITATIONS SEE PROFILE All content following this page was uploaded by Christopher Pomory on 21 May 2014. The user has requested enhancement of the downloaded file. All in-text references underlined in blue are added to the original document and are linked to publications on ResearchGate, letting you access and read them immediately. 1 Key to the common shallow-water brittle stars (Echinodermata: Ophiuroidea) of the Gulf of Mexico and Caribbean Sea CHRISTOPHER M. POMORY 2007 Department of Biology, University of West Florida, 11000 University Parkway, Pensacola, FL 32514, USA. [email protected] ABSTRACT A key is given for 85 species of ophiuroids from the Gulf of Mexico and Caribbean Sea covering a depth range from the intertidal down to 30 m. Figures highlighting important anatomical features associated with couplets in the key are provided. 2 INTRODUCTION The Caribbean region is one of the major coral reef zoogeographic provinces and a region of intensive human use of marine resources for tourism and fisheries (Aide and Grau, 2004). With the world-wide decline of coral reefs, and deterioration of shallow-water marine habitats in general, ecological and biodiversity studies have become more important than ever before (Bellwood et al., 2004). Ecological and biodiversity studies require identification of collected specimens, often by biologists not specializing in taxonomy, and therefore identification guides easily accessible to a diversity of biologists are necessary. -
S41598-021-95872-0.Pdf
www.nature.com/scientificreports OPEN Phylogeography, colouration, and cryptic speciation across the Indo‑Pacifc in the sea urchin genus Echinothrix Simon E. Coppard1,2*, Holly Jessop1 & Harilaos A. Lessios1 The sea urchins Echinothrix calamaris and Echinothrix diadema have sympatric distributions throughout the Indo‑Pacifc. Diverse colour variation is reported in both species. To reconstruct the phylogeny of the genus and assess gene fow across the Indo‑Pacifc we sequenced mitochondrial 16S rDNA, ATPase‑6, and ATPase‑8, and nuclear 28S rDNA and the Calpain‑7 intron. Our analyses revealed that E. diadema formed a single trans‑Indo‑Pacifc clade, but E. calamaris contained three discrete clades. One clade was endemic to the Red Sea and the Gulf of Oman. A second clade occurred from Malaysia in the West to Moorea in the East. A third clade of E. calamaris was distributed across the entire Indo‑Pacifc biogeographic region. A fossil calibrated phylogeny revealed that the ancestor of E. diadema diverged from the ancestor of E. calamaris ~ 16.8 million years ago (Ma), and that the ancestor of the trans‑Indo‑Pacifc clade and Red Sea and Gulf of Oman clade split from the western and central Pacifc clade ~ 9.8 Ma. Time since divergence and genetic distances suggested species level diferentiation among clades of E. calamaris. Colour variation was extensive in E. calamaris, but not clade or locality specifc. There was little colour polymorphism in E. diadema. Interpreting phylogeographic patterns of marine species and understanding levels of connectivity among popula- tions across the World’s oceans is of increasing importance for informed conservation decisions 1–3. -
Biological and Taxonomic Perspective of Triterpenoid Glycosides of Sea Cucumbers of the Family Holothuriidae (Echinodermata, Holothuroidea)
Comparative Biochemistry and Physiology, Part B 180 (2015) 16–39 Contents lists available at ScienceDirect Comparative Biochemistry and Physiology, Part B journal homepage: www.elsevier.com/locate/cbpb Review Biological and taxonomic perspective of triterpenoid glycosides of sea cucumbers of the family Holothuriidae (Echinodermata, Holothuroidea) Magali Honey-Escandón a,⁎, Roberto Arreguín-Espinosa a, Francisco Alonso Solís-Marín b,YvesSamync a Departamento de Química de Biomacromoléculas, Instituto de Química, Universidad Nacional Autónoma de México, Circuito Exterior s/n, Ciudad Universitaria, C.P. 04510 México, D. F., Mexico b Laboratorio de Sistemática y Ecología de Equinodermos, Instituto de Ciencias del Mar y Limnología, Universidad Nacional Autónoma de México, Apartado Postal 70-350, C.P. 04510 México, D. F., Mexico c Scientific Service of Heritage, Invertebrates Collections, Royal Belgian Institute of Natural Sciences, Vautierstraat 29, B-1000 Brussels, Belgium article info abstract Article history: Since the discovery of saponins in sea cucumbers, more than 150 triterpene glycosides have been described for Received 20 May 2014 the class Holothuroidea. The family Holothuriidae has been increasingly studied in search for these compounds. Received in revised form 18 September 2014 With many species awaiting recognition and formal description this family currently consists of five genera and Accepted 18 September 2014 the systematics at the species-level taxonomy is, however, not yet fully understood. We provide a bibliographic Available online 28 September 2014 review of the triterpene glycosides that has been reported within the Holothuriidae and analyzed the relationship of certain compounds with the presence of Cuvierian tubules. We found 40 species belonging to four genera and Keywords: Cuvierian tubules 121 compounds. -
Biodiversidad De Los Equinodermos (Echinodermata) Del Mar Profundo Mexicano
Biodiversidad de los equinodermos (Echinodermata) del mar profundo mexicano Francisco A. Solís-Marín,1 A. Laguarda-Figueras,1 A. Durán González,1 A.R. Vázquez-Bader,2 Adolfo Gracia2 Resumen Nuestro conocimiento de la diversidad del mar profundo en aguas mexicanas se limita a los escasos estudios existentes. El número de especies descritas es incipiente y los registros taxonómicos que existen provienen sobre todo de estudios realizados por ex- tranjeros y muy pocos por investigadores mexicanos, con los cuales es posible conjuntar algunas listas faunísticas. Es importante dar a conocer lo que se sabe hasta el momen- to sobre los equinodermos de las zonas profundas de México, información básica para diversos sectores en nuestro país, tales como los tomadores de decisiones y científicos interesados en el tema. México posee hasta el momento 643 especies de equinoder- mos reportadas en sus aguas territoriales, aproximadamente el 10% del total de las especies reportadas en todo el planeta (~7,000). Según los registros de la Colección Nacional de Equinodermos (ICML, UNAM), la Colección de Equinodermos del “Natural History Museum, Smithsonian Institution”, Washington, DC., EUA y la bibliografía revisa- 1 Colección Nacional de Equinodermos “Ma. E. Caso Muñoz”, Laboratorio de Sistemá- tica y Ecología de Equinodermos, Instituto de Ciencias del Mar y Limnología (ICML), Universidad Nacional Autónoma de México (UNAM). Apdo. Post. 70-305, México, D. F. 04510, México. 2 Laboratorio de Ecología Pesquera de Crustáceos, Instituto de Ciencias del Mar y Lim- nología (ICML), (UNAM), Apdo. Postal 70-305, México D. F., 04510, México. 215 da, existen 348 especies de equinodermos que habitan las aguas profundas mexicanas (≥ 200 m) lo que corresponde al 54.4% del total de las especies reportadas para el país.