Benthic Habitats and Biodiversity of Dampier and Montebello Marine
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A Classification of Living and Fossil Genera of Decapod Crustaceans
RAFFLES BULLETIN OF ZOOLOGY 2009 Supplement No. 21: 1–109 Date of Publication: 15 Sep.2009 © National University of Singapore A CLASSIFICATION OF LIVING AND FOSSIL GENERA OF DECAPOD CRUSTACEANS Sammy De Grave1, N. Dean Pentcheff 2, Shane T. Ahyong3, Tin-Yam Chan4, Keith A. Crandall5, Peter C. Dworschak6, Darryl L. Felder7, Rodney M. Feldmann8, Charles H. J. M. Fransen9, Laura Y. D. Goulding1, Rafael Lemaitre10, Martyn E. Y. Low11, Joel W. Martin2, Peter K. L. Ng11, Carrie E. Schweitzer12, S. H. Tan11, Dale Tshudy13, Regina Wetzer2 1Oxford University Museum of Natural History, Parks Road, Oxford, OX1 3PW, United Kingdom [email protected] [email protected] 2Natural History Museum of Los Angeles County, 900 Exposition Blvd., Los Angeles, CA 90007 United States of America [email protected] [email protected] [email protected] 3Marine Biodiversity and Biosecurity, NIWA, Private Bag 14901, Kilbirnie Wellington, New Zealand [email protected] 4Institute of Marine Biology, National Taiwan Ocean University, Keelung 20224, Taiwan, Republic of China [email protected] 5Department of Biology and Monte L. Bean Life Science Museum, Brigham Young University, Provo, UT 84602 United States of America [email protected] 6Dritte Zoologische Abteilung, Naturhistorisches Museum, Wien, Austria [email protected] 7Department of Biology, University of Louisiana, Lafayette, LA 70504 United States of America [email protected] 8Department of Geology, Kent State University, Kent, OH 44242 United States of America [email protected] 9Nationaal Natuurhistorisch Museum, P. O. Box 9517, 2300 RA Leiden, The Netherlands [email protected] 10Invertebrate Zoology, Smithsonian Institution, National Museum of Natural History, 10th and Constitution Avenue, Washington, DC 20560 United States of America [email protected] 11Department of Biological Sciences, National University of Singapore, Science Drive 4, Singapore 117543 [email protected] [email protected] [email protected] 12Department of Geology, Kent State University Stark Campus, 6000 Frank Ave. -
From the Indonesian Archipelago
A contribution to the knowledge of the pectinacean Mollusca (Bivalvia: Propeamussiidae, Entoliidae, Pectinidae) from the Indonesian Archipelago H.H. Dijkstra Dijkstra, H.H. A contribution to the knowledge of the pectinacean Mollusca (Bivalvia: Propea- mussiidae, Entoliidae, Pectinidae) from the Indonesian Archipelago. Zool. Verh. Leiden 271, 24.xii.l991: l-57, figs. 1-94, 1 table. — ISSN 0024-1652. Key words: Mollusca; Bivalvia; Propeamussiidae; Entoliidae; Pectinidae; taxonomy; Indonesia. Abstract: During the Indonesian-Dutch SNELLIUS -II Expedition (1984-1985) to the Indonesian Archipelago 46 pectinacean species were collected from the Flores Sea and Banda Sea (5°52'-9°57'S, 118°12'-123°58'E) at littoral to bathyal depth (835 m). One new pectinid genus, viz. Glorichlamys gen. nov., six new propeamussiids, viz. Parvamussium araneum spec. nov., Parvamussium carbaseum spec. nov., Parvamussium cassium spec. nov., Parvamussium undosum spec. nov., Parvamussium virgatum spec. nov., Cyclopecten cancellus spec. nov., and one new entoliid, viz. Pectinella aequoris spec. nov. are described. Twelve new records of Pectinacea for this region are mentioned. For Ostrea squamosa Gmelin, 1791 a lectotype is designated. In addition Pectinidae of the SNELLIUS-Expedition (1929- 1930) to the eastern region of Indonesia, and material collected by Dr B.W. Hoeksema near Sulawesi (1985, 1986) are reported upon. H.H. Dijkstra, Zoological Museum Amsterdam, P.O. Box 4766, 1009 AT Amsterdam, The Netherlands. Contents Introduction 3 Acknowledgements and abbreviations 5 Systematic part 6 Propeamussiidae 6 Entoliidae 23 Pectinidae 25 References 50 Index 55 Introduction For several centuries already Pectinidae are known from the Indonesian Archi• pelago. These were brought to Europe by explorers and commercial travellers. -
Taxonomy and Diversity of the Sponge Fauna from Walters Shoal, a Shallow Seamount in the Western Indian Ocean Region
Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region By Robyn Pauline Payne A thesis submitted in partial fulfilment of the requirements for the degree of Magister Scientiae in the Department of Biodiversity and Conservation Biology, University of the Western Cape. Supervisors: Dr Toufiek Samaai Prof. Mark J. Gibbons Dr Wayne K. Florence The financial assistance of the National Research Foundation (NRF) towards this research is hereby acknowledged. Opinions expressed and conclusions arrived at, are those of the author and are not necessarily to be attributed to the NRF. December 2015 Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region Robyn Pauline Payne Keywords Indian Ocean Seamount Walters Shoal Sponges Taxonomy Systematics Diversity Biogeography ii Abstract Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region R. P. Payne MSc Thesis, Department of Biodiversity and Conservation Biology, University of the Western Cape. Seamounts are poorly understood ubiquitous undersea features, with less than 4% sampled for scientific purposes globally. Consequently, the fauna associated with seamounts in the Indian Ocean remains largely unknown, with less than 300 species recorded. One such feature within this region is Walters Shoal, a shallow seamount located on the South Madagascar Ridge, which is situated approximately 400 nautical miles south of Madagascar and 600 nautical miles east of South Africa. Even though it penetrates the euphotic zone (summit is 15 m below the sea surface) and is protected by the Southern Indian Ocean Deep- Sea Fishers Association, there is a paucity of biodiversity and oceanographic data. -
This Is the Peer Reviewed Version of the Following Article: JM Serb, E
ACCEPTED VERSION "This is the peer reviewed version of the following article: J. M. Serb, E. Sherratt, A. Alejandrino & D. C. Adams Phylogenetic convergence and multiple shell shape optima for gliding scallops (Bivalvia: Pectinidae) Journal of Evolutionary Biology, 2017; 30(9):1736-1747 © 2017 European Society for Evolutionary Biology which has been published in final form at https://doi.org/10.1111/jeb.13137 This article may be used for non-commercial purposes in accordance with Wiley Terms and Conditions for Self-Archiving." PERMISSIONS https://authorservices.wiley.com/author-resources/Journal-Authors/licensing-open-access/open- access/self-archiving.html Publishing in a subscription based journal Accepted (peer-reviewed) Version The accepted version of an article is the version that incorporates all amendments made during the peer review process, but prior to the final published version (the Version of Record, which includes; copy and stylistic edits, online and print formatting, citation and other linking, deposit in abstracting and indexing services, and the addition of bibliographic and other material. Self-archiving of the accepted version is subject to an embargo period of 12-24 months. The embargo period is 12 months for scientific, technical, and medical (STM) journals and 24 months for social science and humanities (SSH) journals following publication of the final article. • the author's personal website • the author's company/institutional repository or archive • not for profit subject-based repositories such as PubMed Central Articles may be deposited into repositories on acceptance, but access to the article is subject to the embargo period. Journal of Evolutionary Biology - 12 months embargo The version posted must include the following notice on the first page: "This is the peer reviewed version of the following article: [FULL CITE], which has been published in final form at [Link to final article using the DOI]. -
The Species of Sand Crabs in the Genus Lepidopa (Decadopa: Albuneidae) by I W E
Zool. Anz., Leipzig 186 (1971) 1/2, S. 59-102 The Species of Sand Crabs in the Genus Lepidopa (Decadopa: Albuneidae) By I w E. Ei Foai)1 Willi 12 Figures (Kingegangen am 10. bebruar 1970) This [taper eonlains a review of liie species in (fie genus Lepidopa and descriptions of six new species. The evolutionary relationship between the species is discussed with particular reference to geographical distribution and to the closure of the sea connection across Central America in the late Pliocene. 1 Prof. Dr. Ian E. Efford, Institute of Animal Resource Ecology, Department of Zoo- logy, University of British Columbia, Vancouver 8, British Columbia (Canada). 60 I. K. h]f'l'ord, The Species of Sand Crabs in llie Genus Lepidopa TIOT.THUIS (19G.1, 19G2) has recently reviewed the eighteenth and early nineleenlli century literature dealing with the genus Lepidopa and he concluded that EAUIUCUTS (1793) and DKSMAREST (1825) in their descriptions of Albunca scutellala were dealing with llie hrachyuran crah, Th'ui scutellala and not with a species [hat other authors have assigned to the genus Lepidopa. Thus the first published description of a crab that can definilelv be assigned to the genus Lepidopa is II. MII.NI: EDWAIIDS' (1837) description of Albunca scu- 1 dial a. IIOLTIIUIS (1961) suggested that tliis was probably a specimen of T.epidopa rich- niondi but recently I examined an individual of Lepidopa hcnedicli in the Paris Museum that is probably MILNE EDWARDS' original specimen. The label reads 'Lepidopa sciitellata type?' and, according to Dr. J. FOREST, was written by BOCVIKR; however, the specimen is much older than this label and agrees closely wilh \ 111 \i KDWAHDS' original figure. -
Phylogeny of the Damselfishes (Pomacentridae) and Patterns of Asymmetrical Diversification in Body Size and Feeding Ecology
bioRxiv preprint doi: https://doi.org/10.1101/2021.02.07.430149; this version posted February 8, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Phylogeny of the damselfishes (Pomacentridae) and patterns of asymmetrical diversification in body size and feeding ecology Charlene L. McCord a, W. James Cooper b, Chloe M. Nash c, d & Mark W. Westneat c, d a California State University Dominguez Hills, College of Natural and Behavioral Sciences, 1000 E. Victoria Street, Carson, CA 90747 b Western Washington University, Department of Biology and Program in Marine and Coastal Science, 516 High Street, Bellingham, WA 98225 c University of Chicago, Department of Organismal Biology and Anatomy, and Committee on Evolutionary Biology, 1027 E. 57th St, Chicago IL, 60637, USA d Field Museum of Natural History, Division of Fishes, 1400 S. Lake Shore Dr., Chicago, IL 60605 Corresponding author: Mark W. Westneat [email protected] Journal: PLoS One Keywords: Pomacentridae, phylogenetics, body size, diversification, evolution, ecotype Abstract The damselfishes (family Pomacentridae) inhabit near-shore communities in tropical and temperature oceans as one of the major lineages with ecological and economic importance for coral reef fish assemblages. Our understanding of their evolutionary ecology, morphology and function has often been advanced by increasingly detailed and accurate molecular phylogenies. Here we present the next stage of multi-locus, molecular phylogenetics for the group based on analysis of 12 nuclear and mitochondrial gene sequences from 330 of the 422 damselfish species. -
A Soft Spot for Chemistry–Current Taxonomic and Evolutionary Implications of Sponge Secondary Metabolite Distribution
marine drugs Review A Soft Spot for Chemistry–Current Taxonomic and Evolutionary Implications of Sponge Secondary Metabolite Distribution Adrian Galitz 1 , Yoichi Nakao 2 , Peter J. Schupp 3,4 , Gert Wörheide 1,5,6 and Dirk Erpenbeck 1,5,* 1 Department of Earth and Environmental Sciences, Palaeontology & Geobiology, Ludwig-Maximilians-Universität München, 80333 Munich, Germany; [email protected] (A.G.); [email protected] (G.W.) 2 Graduate School of Advanced Science and Engineering, Waseda University, Shinjuku-ku, Tokyo 169-8555, Japan; [email protected] 3 Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl-von-Ossietzky University Oldenburg, 26111 Wilhelmshaven, Germany; [email protected] 4 Helmholtz Institute for Functional Marine Biodiversity, University of Oldenburg (HIFMB), 26129 Oldenburg, Germany 5 GeoBio-Center, Ludwig-Maximilians-Universität München, 80333 Munich, Germany 6 SNSB-Bavarian State Collection of Palaeontology and Geology, 80333 Munich, Germany * Correspondence: [email protected] Abstract: Marine sponges are the most prolific marine sources for discovery of novel bioactive compounds. Sponge secondary metabolites are sought-after for their potential in pharmaceutical applications, and in the past, they were also used as taxonomic markers alongside the difficult and homoplasy-prone sponge morphology for species delineation (chemotaxonomy). The understanding Citation: Galitz, A.; Nakao, Y.; of phylogenetic distribution and distinctiveness of metabolites to sponge lineages is pivotal to reveal Schupp, P.J.; Wörheide, G.; pathways and evolution of compound production in sponges. This benefits the discovery rate and Erpenbeck, D. A Soft Spot for yield of bioprospecting for novel marine natural products by identifying lineages with high potential Chemistry–Current Taxonomic and Evolutionary Implications of Sponge of being new sources of valuable sponge compounds. -
Nansei Islands Biological Diversity Evaluation Project Report 1 Chapter 1
Introduction WWF Japan’s involvement with the Nansei Islands can be traced back to a request in 1982 by Prince Phillip, Duke of Edinburgh. The “World Conservation Strategy”, which was drafted at the time through a collaborative effort by the WWF’s network, the International Union for Conservation of Nature (IUCN), and the United Nations Environment Programme (UNEP), posed the notion that the problems affecting environments were problems that had global implications. Furthermore, the findings presented offered information on precious environments extant throughout the globe and where they were distributed, thereby providing an impetus for people to think about issues relevant to humankind’s harmonious existence with the rest of nature. One of the precious natural environments for Japan given in the “World Conservation Strategy” was the Nansei Islands. The Duke of Edinburgh, who was the President of the WWF at the time (now President Emeritus), naturally sought to promote acts of conservation by those who could see them through most effectively, i.e. pertinent conservation parties in the area, a mandate which naturally fell on the shoulders of WWF Japan with regard to nature conservation activities concerning the Nansei Islands. This marked the beginning of the Nansei Islands initiative of WWF Japan, and ever since, WWF Japan has not only consistently performed globally-relevant environmental studies of particular areas within the Nansei Islands during the 1980’s and 1990’s, but has put pressure on the national and local governments to use the findings of those studies in public policy. Unfortunately, like many other places throughout the world, the deterioration of the natural environments in the Nansei Islands has yet to stop. -
Proposal for a Revised Classification of the Demospongiae (Porifera) Christine Morrow1 and Paco Cárdenas2,3*
Morrow and Cárdenas Frontiers in Zoology (2015) 12:7 DOI 10.1186/s12983-015-0099-8 DEBATE Open Access Proposal for a revised classification of the Demospongiae (Porifera) Christine Morrow1 and Paco Cárdenas2,3* Abstract Background: Demospongiae is the largest sponge class including 81% of all living sponges with nearly 7,000 species worldwide. Systema Porifera (2002) was the result of a large international collaboration to update the Demospongiae higher taxa classification, essentially based on morphological data. Since then, an increasing number of molecular phylogenetic studies have considerably shaken this taxonomic framework, with numerous polyphyletic groups revealed or confirmed and new clades discovered. And yet, despite a few taxonomical changes, the overall framework of the Systema Porifera classification still stands and is used as it is by the scientific community. This has led to a widening phylogeny/classification gap which creates biases and inconsistencies for the many end-users of this classification and ultimately impedes our understanding of today’s marine ecosystems and evolutionary processes. In an attempt to bridge this phylogeny/classification gap, we propose to officially revise the higher taxa Demospongiae classification. Discussion: We propose a revision of the Demospongiae higher taxa classification, essentially based on molecular data of the last ten years. We recommend the use of three subclasses: Verongimorpha, Keratosa and Heteroscleromorpha. We retain seven (Agelasida, Chondrosiida, Dendroceratida, Dictyoceratida, Haplosclerida, Poecilosclerida, Verongiida) of the 13 orders from Systema Porifera. We recommend the abandonment of five order names (Hadromerida, Halichondrida, Halisarcida, lithistids, Verticillitida) and resurrect or upgrade six order names (Axinellida, Merliida, Spongillida, Sphaerocladina, Suberitida, Tetractinellida). Finally, we create seven new orders (Bubarida, Desmacellida, Polymastiida, Scopalinida, Clionaida, Tethyida, Trachycladida). -
Fishes of Terengganu East Coast of Malay Peninsula, Malaysia Ii Iii
i Fishes of Terengganu East coast of Malay Peninsula, Malaysia ii iii Edited by Mizuki Matsunuma, Hiroyuki Motomura, Keiichi Matsuura, Noor Azhar M. Shazili and Mohd Azmi Ambak Photographed by Masatoshi Meguro and Mizuki Matsunuma iv Copy Right © 2011 by the National Museum of Nature and Science, Universiti Malaysia Terengganu and Kagoshima University Museum All rights reserved. No part of this publication may be reproduced or transmitted in any form or by any means without prior written permission from the publisher. Copyrights of the specimen photographs are held by the Kagoshima Uni- versity Museum. For bibliographic purposes this book should be cited as follows: Matsunuma, M., H. Motomura, K. Matsuura, N. A. M. Shazili and M. A. Ambak (eds.). 2011 (Nov.). Fishes of Terengganu – east coast of Malay Peninsula, Malaysia. National Museum of Nature and Science, Universiti Malaysia Terengganu and Kagoshima University Museum, ix + 251 pages. ISBN 978-4-87803-036-9 Corresponding editor: Hiroyuki Motomura (e-mail: [email protected]) v Preface Tropical seas in Southeast Asian countries are well known for their rich fish diversity found in various environments such as beautiful coral reefs, mud flats, sandy beaches, mangroves, and estuaries around river mouths. The South China Sea is a major water body containing a large and diverse fish fauna. However, many areas of the South China Sea, particularly in Malaysia and Vietnam, have been poorly studied in terms of fish taxonomy and diversity. Local fish scientists and students have frequently faced difficulty when try- ing to identify fishes in their home countries. During the International Training Program of the Japan Society for Promotion of Science (ITP of JSPS), two graduate students of Kagoshima University, Mr. -
Trait Decoupling Promotes Evolutionary Diversification of The
Trait decoupling promotes evolutionary diversification of the trophic and acoustic system of damselfishes rspb.royalsocietypublishing.org Bruno Fre´de´rich1, Damien Olivier1, Glenn Litsios2,3, Michael E. Alfaro4 and Eric Parmentier1 1Laboratoire de Morphologie Fonctionnelle et Evolutive, Applied and Fundamental Fish Research Center, Universite´ de Lie`ge, 4000 Lie`ge, Belgium 2Department of Ecology and Evolution, University of Lausanne, 1015 Lausanne, Switzerland Research 3Swiss Institute of Bioinformatics, Ge´nopode, Quartier Sorge, 1015 Lausanne, Switzerland 4Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA 90095, USA Cite this article: Fre´de´rich B, Olivier D, Litsios G, Alfaro ME, Parmentier E. 2014 Trait decou- Trait decoupling, wherein evolutionary release of constraints permits special- pling promotes evolutionary diversification of ization of formerly integrated structures, represents a major conceptual the trophic and acoustic system of damsel- framework for interpreting patterns of organismal diversity. However, few fishes. Proc. R. Soc. B 281: 20141047. empirical tests of this hypothesis exist. A central prediction, that the tempo of morphological evolution and ecological diversification should increase http://dx.doi.org/10.1098/rspb.2014.1047 following decoupling events, remains inadequately tested. In damselfishes (Pomacentridae), a ceratomandibular ligament links the hyoid bar and lower jaws, coupling two main morphofunctional units directly involved in both feeding and sound production. Here, we test the decoupling hypothesis Received: 2 May 2014 by examining the evolutionary consequences of the loss of the ceratomandib- Accepted: 9 June 2014 ular ligament in multiple damselfish lineages. As predicted, we find that rates of morphological evolution of trophic structures increased following the loss of the ligament. -
Ancillariidae
WMSDB - Worldwide Mollusc Species Data Base Family: ANCILLARIIDAE Author: Claudio Galli - [email protected] (updated 06/lug/2017) Class: GASTROPODA --- Taxon Tree: CAENOGASTROPODA-NEOGASTROPODA-OLIVOIDEA ------ Family: ANCILLARIIDAE Swainson, 1840 (Sea) - Alphabetic order - when first name is in bold the species has images DB counters=528, Genus=16, Subgenus=11, Species=356, Subspecies=20, Synonyms=124, Images=342 abdoi, Ancillus abdoi Awad & Abed, 1967 † (FOSSIL) abessensis , Alocospira abessensis Lozouet, 1992 † (FOSSIL) abyssicola , Amalda abyssicola Schepman, 1911 acontistes , Ancilla acontistes Kilburn, 1980 acuminata , Ancilla acuminata (Sowerby, 1859) acuta , Amalda acuta Ninomiya, 1991 acutula , Eoancilla acutula Stephenson, 1941 † (FOSSIL) adansoni , Ancilla adansoni Blainville, 1825 - syn of: Anolacia mauritiana (Sowerby, 1830) adelaidensis , Ancilla adelaidensis Ludbrook, 1958 † (FOSSIL) adelphae , Ancilla adelphae Bourguignat, 1880 - syn of: Ancilla adelphe Kilburn, 1981 adelphe , Ancilla adelphe Kilburn, 1981 aegyptica, Ancilla aegyptica Oppenheim, 1906 † (FOSSIL) africana , Vanpalmeria africana Adegoke, 1977 † (FOSSIL) agulhasensis , Ancilla agulhasensis Thiele, 1925 - syn of: Ancilla ordinaria Smith, 1906 akontistes , Turrancilla akontistes (Kilburn, 1980) akontistes , Ancilla akontistes Kilburn, 1980 - syn of: Turrancilla akontistes (Kilburn, 1980) alazana , Ancillina alazana Cooke, 1928 † (FOSSIL) alba , Ancilla alba Perry, 1811 - syn of: Bullia vittata (Linnaeus, 1767) albanyensis , Amalda albanyensis Ninomiya,