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Phylogeny, Morphology, and Ecology Resurrect Previously Synonymized Species of North American Stereum Sarah G
bioRxiv preprint doi: https://doi.org/10.1101/2020.10.16.342840; this version posted October 16, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Phylogeny, morphology, and ecology resurrect previously synonymized species of North American Stereum Sarah G. Delong-Duhon and Robin K. Bagley Department of Biology, University of Iowa, Iowa City, IA 52242 [email protected] Abstract Stereum is a globally widespread genus of basidiomycete fungi with conspicuous shelf-like fruiting bodies. Several species have been extensively studied due to their economic importance, but broader Stereum taxonomy has been stymied by pervasive morphological crypsis in the genus. Here, we provide a preliminary investigation into species boundaries among some North American Stereum. The nominal species Stereum ostrea has been referenced in field guides, textbooks, and scientific papers as a common fungus with a wide geographic range and even wider morphological variability. We use ITS sequence data of specimens from midwestern and eastern North America, alongside morphological and ecological characters, to show that Stereum ostrea is a complex of at least three reproductively isolated species. Preliminary morphological analyses show that these three species correspond to three historical taxa that were previously synonymized with S. ostrea: Stereum fasciatum, Stereum lobatum, and Stereum subtomentosum. Stereum hirsutum ITS sequences taken from GenBank suggest that other Stereum species may actually be species complexes. Future work should apply a multilocus approach and global sampling strategy to better resolve the taxonomy and evolutionary history of this important fungal genus. -
Fungi Associated with Decay in Treated Douglas-Fir Transmission Poles in the Northeastern United States
Fungi Associated With Decay In Treated Douglas-fir Transmission Poles In the Northeastern United States Robert A. Zabel Frances F. Lombard Allen M. Kenderes the preservatives used for protection. It also may Abstract provide useful clues on the inoculum sources and the Decay was detected by cultural methods in 190 of 952 timing and sites of decay inception, important in control (approximately 20%) treated Douglas-fir transmission poles programs. For these purposes lists of the major fungi installed for up to 10 years in the northeastern United States . Preservative systems and treatments for the poles sampled associated with decay in various wood products, were penta in petroleum oil, penta in liquefied petroleum gas , including wood poles, in service in the United States chromated copper arsenate, and ammoniacal copper arsenate. have been assembled by Cowling (1) and Duncan and Isolations were made from various radial positions on several Lombard (4). Information on the principal fungi in increment cores selected from the groundline zone and deep North America associated with decay development in check vicinity for each pole. The decay was in early stages, utility poles, classified by timber species and regions, often localized, and in many cases, detectable only by cultural has been assembled by Eslyn (5). His report stated a mea ns. The decay fungi, representing 19 identified species, need for additional studies to determine the fungi were isolated primarily from untreated inner pole sections and associated with decay development in utility poles in at the groundline. Poria carbonica, a decay fungus known service in the Northeast. primarily from the western United States, and Poria placenta, were the two species isolated most frequently. -
A Taxonomic Analysis of Miscellaneous Fungi Collected from Burma
1 2 Mycosphere 6 (1): 8–12 (2015) ISSN 2077 7019 3 www.mycosphere.org Article Mycosphere Copyright © 2015 Online Edition Doi 10.5943/mycosphere/6/1/2 A taxonomic analysis of miscellaneous fungi collected from Burma Thaung MM1,2 1 5482 Los Robles, La Verne, CA 91750-1643, USA. [email protected] 2 University and Jepson Herbaria/Botany, 1001 Valley Life Sciences Building # 2465, University of California, Berkeley, CA 94720-2465 Thaung MM 2015 – A taxonomic analysis of miscellaneous fungi collected from Burma. Mycosphere 6(1), 8–12, Doi 10.5943/mycosphere/6/1/2 Abstract Records of fungi from Burma are updated to align with their current taxonomic nomenclature and classification. The update has generated a classified list of 58 contemporary species assigned to 27 families in 14 orders and 7 classes. This analysis aims at fungal taxa reported in world literature on Burma with a view to annotating and adding them to the local inventory for further enrichment and refinement. Key words – aloewood – amber – biodiversity – Myanmar – systematics – truffle Introduction Fungi have been living in Burma in freedom since some 100 million years ago when a few of them had the misfortune of being entombed alive in Early Cretaceous Burmese amber (Poinar & Buckley 2007). Their ancestors watched in silence as the dinosaurs roared, roamed, and ruled the earth. While some still remain entrapped in amber outside the plant (Poinar et al. 2014), others entered the wood and remained embedded to help generate rich fragrance for the world (Kurz 1877). At the other end of the spectrum, there lies hidden close to the roots, as little eggs or balls, a local truffle (Kaing-U or Kaing-Oo) in association with tall elephant grass (Pennistum purpureum Roem. -
Of Uttarakhand I.B
Journal on New Biological Reports 2(2): 108-123 (2013) ISSN 2319 – 1104 (Online) A Checklist of Wood rotting fungi (non-gilled Agaricomycotina) of Uttarakhand I.B. Prasher* & Lalita Department of Botany, Punjab University, Chandigarh-1600014, India (Received on: 17 April, 2013; accepted on : l6 May, 2013) ABSTRACT Two hundred species of wood rotting non-gilled Agaricomycotina are being recorded from state of Uttarakhand (North Western Himalayas), India. These belong to 27 families spreading over 100 genera. These are recorded from various regions viz.: Dehradun, Mussoorie, Nainital, Rishikesh, Chamoli, Nanda Devi Biosphere Reserve, Uttarkashi, Hemkunt and Chakrata of study area. This constitutes the first consolidated account of these fungi from Uttarakhand state (N. W. Himalayas). Key Words: Non-gilled Agaricomycotina, wood-rot, fungi, Uttarakhand. INTRODUCTION Wood is decomposed by fungi through several Study Area types of rot (Rypá ček 1957; Rypá ček 1966; Schwarze et al. 2000; Martínez et al . 2005). Some The state of Uttarakhand extends between 28 °C of these can be distinguished in the field according 43’N to 31 °C 27’N latitude and 77 °C 34’E to 81 0C to their features in suitable decay stages to the 02’E altitude. It is one of five states of the Indian genus or species level, e.g. Armillaria spp., Union which are a part of the N.W. Himalayan Phellinus nigrolimitatus , Fomitopsis pinicola region. The region of Uttarakhand has a total area (Ryvarden and Gilbertson 1993, 1994) . Woody of 53,566 km² and is covered by mountains tissues are degraded by fungi, and these wood- (approximately 93%) and forests show up on about decay fungi fall into three types according to their 64% of the mountains. -
Delineations of Forest Fungi: Morphology and Relationships of Vararia
DELINEATIONS OF FOREST FUNGI: MORPHOLOGY AND RELATIONSHIPS OF VARARIA by PAUL L. LENTZ1 & HAZEL H. McKAY u (with 5 plates) (22.V.1965) INTRODUCTION Vararia includes cortieioid and stereoid species of the basidiomy- cetous order Aphyllophorales (Polyporales). This discussion of the genus is based on a series of collections from Mississippi by LENTZ (1959), on numerous specimens in the National Fungus Collections, on a few borrowed type collections, and on cultures prepared by LENTZ and various others and maintained in the culture collection of the Forest Disease Research Laboratory. Morphological details of individual species and citation of specimens will be provided in a paper now being prepared. BASIDIOCARPS Basidiocarps of Vararia develop in a manner entirely unfami- liar to mycologists a few years ago but now becoming well known from investigations of genera such as Laeticorticium (DoNK, 1956, 1957) and Aleurodiscus (LEMKE, 1964). The essential characteris- tic of this group is formation of basidia at a considerable depth be- neath the hymenial surface and the resultant passage of the apical portion of the basidium through a blanketing hyphal mass in order to reach the surface. DONK (1957) used the term hyphidial hyme- nium for this kind of development, but his "thickening euhymenium" apparently is correlated with the same pattern of basidiaI devel- opment. LEMKE (1964) substituted the term catahymenium for hyphidial hymenium, and DONK (1964) accepted LEMKE'S term be- cause, as he said, the blanketing hyphal mass may also include gloe- ocystidia. 1) Mycologist, Crops Research Division, Agricultural Research Service, U.S. Department of Agriculture, Beltsville, Maryland. 2) Botanist, Beltsville Forest Disease Research Laboratory, Forest Service, U.S. -
73 Supplementary Data Genbank Accession Numbers Species Name
73 Supplementary Data The phylogenetic distribution of resupinate forms across the major clades of homobasidiomycetes. BINDER, M., HIBBETT*, D. S., LARSSON, K.-H., LARSSON, E., LANGER, E. & LANGER, G. *corresponding author: [email protected] Clades (C): A=athelioid clade, Au=Auriculariales s. str., B=bolete clade, C=cantharelloid clade, Co=corticioid clade, Da=Dacymycetales, E=euagarics clade, G=gomphoid-phalloid clade, GL=Gloephyllum clade, Hy=hymenochaetoid clade, J=Jaapia clade, P=polyporoid clade, R=russuloid clade, Rm=Resinicium meridionale, T=thelephoroid clade, Tr=trechisporoid clade, ?=residual taxa as (artificial?) sister group to the athelioid clade. Authorities were drawn from Index Fungorum (http://www.indexfungorum.org/) and strain numbers were adopted from GenBank (http://www.ncbi.nlm.nih.gov/). GenBank accession numbers are provided for nuclear (nuc) and mitochondrial (mt) large and small subunit (lsu, ssu) sequences. References are numerically coded; full citations (if published) are listed at the end of this table. C Species name Authority Strain GenBank accession References numbers nuc-ssu nuc-lsu mt-ssu mt-lsu P Abortiporus biennis (Bull.) Singer (1944) KEW210 AF334899 AF287842 AF334868 AF393087 4 1 4 35 R Acanthobasidium norvegicum (J. Erikss. & Ryvarden) Boidin, Lanq., Cand., Gilles & T623 AY039328 57 Hugueney (1986) R Acanthobasidium phragmitis Boidin, Lanq., Cand., Gilles & Hugueney (1986) CBS 233.86 AY039305 57 R Acanthofungus rimosus Sheng H. Wu, Boidin & C.Y. Chien (2000) Wu9601_1 AY039333 57 R Acanthophysium bisporum Boidin & Lanq. (1986) T614 AY039327 57 R Acanthophysium cerussatum (Bres.) Boidin (1986) FPL-11527 AF518568 AF518595 AF334869 66 66 4 R Acanthophysium lividocaeruleum (P. Karst.) Boidin (1986) FP100292 AY039319 57 R Acanthophysium sp. -
Papp Viktor.Pdf
Doktori (PhD) értekezés A Juhdöglő-völgy Erdőrezervátum lignikol bazídiumos nagygombáinak taxonómiája és természetvédelmi helyzete PAPP VIKTOR Témavezető: Dr. Rimóczi Imre, DSc professor emeritus Budapest 2015 A doktori iskola megnevezése: Kertészettudományi Doktori Iskola tudományága: 4. Agrártudományok (4.1 Növénytermesztési és kertészeti tudományok) vezetője: Dr. Tóth Magdolna, DSc egyetemi tanár Budapesti Corvinus Egyetem, Kertészettudományi Kar, Gyümölcstermő Növények Tanszék Témavezető: Dr. Rimóczi Imre, DSc professor emeritus Budapesti Corvinus Egyetem, Kertészettudományi Kar, Növénytani Tanszék és Soroksári Botanikus Kert A doktori iskola- és a témavezető jóváhagyó aláírása: A jelölt a Budapesti Corvinus Egyetem Doktori Szabályzatában előírt valamennyi feltételnek eleget tett, az értekezés műhelyvitájában elhangzott észrevételeket és javaslatokat az értekezés átdolgozásakor figyelembe vette, ezért az értekezés védési eljárásra bocsátható. .................................................. .................................................. Dr. Tóth Magdolna Dr. Rimóczi Imre doktori iskola vezető témavezető 1 A Budapesti Corvinus Egyetem Élettudományi Területi Doktori Tanácsának 2015. december 8-i határozatában a nyilvános vita lefolytatására az alábbi bíráló Bizottságot jelölte ki: BÍRÁLÓ BIZOTTSÁG: Elnöke: Balázs Sándor, MHAS, BCE Tagjai: Terbe István, DSc, BCE Lőkös László, PhD, MTM Bartha Dénes, DSc, NyME Opponensek: Vetter János, DSc, SZIE Lenti István, CSc, Nyíregyházi Főiskola Titkár: Balázs Gábor, PhD, BCE 2 TARTALOMJEGYZÉK -
An Inventory of Fungal Diversity in Ohio Research Thesis Presented In
An Inventory of Fungal Diversity in Ohio Research Thesis Presented in partial fulfillment of the requirements for graduation with research distinction in the undergraduate colleges of The Ohio State University by Django Grootmyers The Ohio State University April 2021 1 ABSTRACT Fungi are a large and diverse group of eukaryotic organisms that play important roles in nutrient cycling in ecosystems worldwide. Fungi are poorly documented compared to plants in Ohio despite 197 years of collecting activity, and an attempt to compile all the species of fungi known from Ohio has not been completed since 1894. This paper compiles the species of fungi currently known from Ohio based on vouchered fungal collections available in digitized form at the Mycology Collections Portal (MyCoPortal) and other online collections databases and new collections by the author. All groups of fungi are treated, including lichens and microfungi. 69,795 total records of Ohio fungi were processed, resulting in a list of 4,865 total species-level taxa. 250 of these taxa are newly reported from Ohio in this work. 229 of the taxa known from Ohio are species that were originally described from Ohio. A number of potentially novel fungal species were discovered over the course of this study and will be described in future publications. The insights gained from this work will be useful in facilitating future research on Ohio fungi, developing more comprehensive and modern guides to Ohio fungi, and beginning to investigate the possibility of fungal conservation in Ohio. INTRODUCTION Fungi are a large and very diverse group of organisms that play a variety of vital roles in natural and agricultural ecosystems: as decomposers (Lindahl, Taylor and Finlay 2002), mycorrhizal partners of plant species (Van Der Heijden et al. -
Invasive Plants Established in the United States That Are Found in Asian and Their Associated Natural Enemies
Quercus acutissima Sawtooth oak Introduction The genus Quercus contains approximately 300 species worldwide with distribution in Asia, Africa, Europe and North America. Thirty-five species are recorded in the revised Flora of China. Members of the genus Quercus grow in almost every province of the country due to their high economic value[74]. Taxonomy Order Fagales Family Fagaceae Species of Quercus in China*[74, 194] Genus Quercus L. Scientific Name Scientific Name Species Quercus acutissima Q. acrodonta Seem. Q. marlipoensis Hu et Cheng Carruth Q. acutissima Carruth. Q. mongolica Fisch. ex LedebIV Description Q. aliena Bl. Q. monimotricha Hand-Mazz. Quercus acutissima is a deciduous Q. aquifolioides Rehd. et Wils. Q. oxyphylla (Wils.) Hand.-Mazz. tree that can reach a height of 30 m Q. baronii Skan Q. palustris Muench. and a diameter of one meter. The Q. bawanglingensis Huang, Li et Xing Q. phillyraeoides A. Gray bark is dark grayish brown with deep V longitudinal fissures. Young shoots are Q. chenii Nakal Q. rehderiana Hand.-Mazz. grayish yellow with grayish yellow Q. cocciferoides Hand.-Mazz. Q. robur L. pubescence becoming glabrescent, and Q. dentata Thunb. Q. semecarpifolia Smith light yellow lenticels. Winter buds are Q. dolicholepis A. Camus Q. senescens Hand.-Mazz. conical and pubescent. The leaves, Q. engleriana Seem.I Q. serrata Thunb 8-19 cm long and 2-6 cm wide, may Q. fabri Hance Q. setulosa Hick. et A. Camus Q. franchetii Skan Q. spinosa David. ex Franch.VI Q. griffithii Hook. F. et Thoms. ex Miq. Q. tarokoensis Hayata Q. guajavifolia Lévl.II Q. utilis Hu et Cheng Q. -
Phylogeny, Morphology, and Ecology Resurrect Previously Synonymized Species of North
bioRxiv preprint doi: https://doi.org/10.1101/2020.10.16.342840; this version posted December 16, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. DeLong-Duhon, S. pg. 1 1 Short title for running head: DeLong-Duhon and Bagley: Species delimitation in Stereum 2 Phylogeny, morphology, and ecology resurrect previously synonymized species of North 3 American Stereum 4 Sarah DeLong-Duhona and Robin K. Bagleyb 5 aDepartment of Biology, University of Iowa, Iowa City, IA 52245; bDepartment of Evolution, 6 Ecology, and Organismal Biology, The Ohio State University at Lima, Lima, OH 7 Sarah DeLong-Duhon https://orcid.org/0000-0003-1865-2413 sarah-delong- 8 [email protected] 9 Robin K. Bagley https://orcid.org/0000-0003-2209-0521 10 ABSTRACT 11 Stereum is a globally widespread genus of basidiomycete fungi with conspicuous shelf-like 12 fruiting bodies. Several species have been extensively studied as pathogens and for medically 13 relevant secondary metabolites, but prior to this publication the molecular phylogeny of 14 Stereum had not been analyzed, despite pervasive morphological crypsis in the genus. Here, 15 we provide a preliminary investigation into species boundaries among some North American 16 Stereum. The nominal species Stereum ostrea has been referenced in field guides, textbooks, 17 and scientific papers as a common fungus with a wide geographic range and even wider 18 morphological variability. We use nuc rDNA ITS1‐5.8S‐ITS2 (ITS barcode) sequence data of 19 specimens from midwestern and eastern North America, alongside morphological and 20 ecological characters, to show that Stereum ostrea is a complex of at least three 21 reproductively isolated species. -
An Annotated Checklist of Non-Poroid Aphyllophorales in China
Ann. Bot. Fennici 41: 233–247 ISSN 0003-3847 Helsinki 27 August 2004 © Finnish Zoological and Botanical Publishing Board 2004 An annotated checklist of non-poroid Aphyllophorales in China Yu-Cheng Dai1,2, Yu-Lian Wei1,2 & Xiao-Qing Zhang2 1) Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang 110016, China 2) Systematic Mycology and Lichenology Laboratory, Chinese Academy of Sciences, Beijing 100080, China Received 20 Nov. 2003, revised version received 15 Dec. 2003, accepted 15 Dec. 2003 Dai, Y. C., Wei, Y. L. & Zhang, X. Q. 2004: An annotated checklist of non-poroid Aphyllophorales in China. — Ann. Bot. Fennici 41: 233–247. Studies of non-poroid Aphyllophorales in China are briefly reviewed, and an annotated catalogue, based mostly on literature, documents 401 species from the country. Based on our collections, five species, Asterodon ferruginosus, Crustoderma dryinum, Mer- uliopsis albostraminea, Phanerochaete galactites and Scytinostroma galactinum, are newly recorded from China. A condensed description of these species is included in the catalogue. The host(s) and distribution of each species are given in the list. Key words: checklist, China, fungal flora, non-poroid Aphyllophorales, taxonomy Introduction 1975, 1976, Eriksson et al. 1978, 1981, 1984, Gilbertson & Ryvarden 1986, 1987, Hjortstam The project is funded by the Chinese Academy 1987, 1988, Ginns & Lefebvre 1993, Ryvarden of Sciences for studying the diversity and ecol- & Gilbertson 1993, 1994, Hjortstam 1997, Ginns ogy of wood-rotting fungi in the Chinese natu- 1998, Kotiranta 2001). In East Asia the poroid ral forests, and the non-poroid Aphyllophorales Aphyllophorales are relatively better known than is one part of our study object. -
In Vivo E in Vitro in Vivo and in Vitro Wood
Núm. 47: 59-76 Enero 2019 ISSN electrónico: 2395-9525 Polibotánica ISSN electrónico: 2395-9525 [email protected] Instituto Politécnico Nacional México http:www.polibotanica.mx DESCOMPOSICIÓN DE LA MADERA DE ROBLE (Quercus spp.) IN VIVO E IN VITRO IN VIVO AND IN VITRO WOOD DECAY OF OAK (Quercus spp.) Carranza-V., J.; J.F. Di Stéfano-G., W. Marín-M., y M. Mata-H. DESCOMPOSICIÓN DE LA MADERA DE ROBLE (Quercus spp.) IN VIVO E IN VITRO. IN VIVO AND IN VITRO WOOD DECAY OF OAK (Quercus spp.). Núm. 47: 59-76 México. Enero 2019 Instituto Politécnico Nacional DOI: 10.18387/polibotanica.47.5 59 Núm. 47: 59-76 Enero 2019 ISSN electrónico: 2395-9525 DESCOMPOSICIÓN DE LA MADERA DE ROBLE (Quercus spp.) IN VIVO E IN VITRO IN VIVO AND IN VITRO WOOD DECAY OF OAK (Quercus spp.) J. Carranza-V./ [email protected]; [email protected] Carranza-V., J.; J.F. Di Escuela de Biología, Universidad de Costa Rica Stéfano G., W. Marín M., Laboratorio de Recursos Forestales, Instituto de Investigaciones en Ingeniería, y M. Mata H. Universidad de Costa Rica, San Pedro, Costa Rica DESCOMPOSICIÓN DE LA MADERA DE ROBLE J.F. Di Stéfano-G. (Quercus spp.) IN VIVO E IN Escuela de Biología, Universidad de Costa Rica, San Pedro, Costa Rica VITRO. W. Marín-M. IN VIVO AND IN VITRO M. Mata-H. WOOD DECAY OF OAK Escuela de Biología, Universidad de Costa Rica (Quercus spp.). Laboratorio de Recursos Forestales, Instituto de Investigaciones en Ingeniería, Universidad de Costa Rica, San Pedro, Costa Rica Instituto Politécnico Nacional RESUMEN: La descomposición de los restos de madera en los bosques ocasiona un flujo considerable de carbono.