Prostaglandins & other Lipid Mediators 122 (2016) 18–27
Contents lists available at ScienceDirect
Prostaglandins and Other Lipid Mediators
Original research article
In silico modelling of prostacyclin and other lipid mediators to nuclear
receptors reveal novel thyroid hormone receptor antagonist properties
∗
Noelia Perez Diaz, Mire Zloh, Pryank Patel, Louise S. Mackenzie
Life and Medical Sciences, University of Hertfordshire, Hatfield AL10 9AB, UK
a r t i c l e i n f o a b s t r a c t
Article history: Prostacyclin (PGI2) is a key mediator involved in cardiovascular homeostasis, acting predominantly on
Received 10 August 2015
two receptor types; cell surface IP receptor and cytosolic peroxisome proliferator activated receptor
Received in revised form
(PPAR) /␦. Having a very short half-life, direct methods to determine its long term effects on cells
19 November 2015
is difficult, and little is known of its interactions with nuclear receptors. Here we used computational
Accepted 7 December 2015
chemistry methods to investigate the potential for PGI2, beraprost (IP receptor agonist), and GW0742
Available online 11 December 2015
 ␦
(PPAR / agonist), to bind to nuclear receptors, confirmed with pharmacological methods.
In silico screening predicted that PGI , beraprost, and GW0742 have the potential to bind to different
Abbreviations: 2
nuclear receptors, in particular thyroid hormone  receptor (TR) and thyroid hormone ␣ receptor (TR␣).
MLS, MLS000389544
Docking analysis predicts a binding profile to residues thought to have allosteric control on the TR ligand
NSAID, non-steroidal anti-inflammatory
drug binding site. Luciferase reporter assays confirmed that beraprost and GW0742 display TR and TR␣
−5 −6
× ×
PPAR/␦, peroxisome proliferator activated antagonistic properties; beraprost IC50 6.3 10 mol/L and GW0742 IC50 4.9 10 mol/L. Changes to
receptor triiodothyronine (T3) induced vasodilation of rat mesenteric arteries measured on the wire myograph − −
PGI , prostacyclin 5 5
2 were measured in the presence of the TR antagonist MLS000389544 (10 mol/L), beraprost (10 mol/L)
PAH, pulmonary artery hypertension −5
and GW0742 (10 mol/L); all significantly inhibited T3 induced vasodilation compared to controls.
T3, triiodothyronine
We have shown that both beraprost and GW0742 exhibit TR and TR␣ antagonist behaviour, and sug-
TR␣, thyroid hormone ␣ receptor
gests that PGI2 has the ability to affect the long term function of cells through binding to and inactivating
TR, thyroid hormone  receptor
thyroid hormone receptors.
Keywords: © 2015 Elsevier Inc. All rights reserved. Prostacyclin Beraprost PPAR
Thyroid hormone
Mesenteric artery
Triiodothyronine
1. Introduction monary artery and bronchi. PGI2 has a very short half-life of 42 s,
which makes direct pharmacological analysis difficult, although
Prostacyclin (PGI2) is a prostaglandin that was first described by there are a large number of PGI2 mimetics available such as iloprost,
Sir John Vane in 1976 as a potent vasodilator and anti-thrombotic beraprost and treprostinil, which have half-lives of 30 min, 40 min
agent of the vasculature [1]. The long term effects of PGI2 is known and 4 h respectively. Prostanoid signalling is of key importance
to be important in different organ systems, for example PGI2 is in the lung, as evidenced by the use of PGI2 mimetics in pul-
known to suppress airway remodelling in experimental asthma monary artery hypertension and non-steroidal anti-inflammatory
models [2], and has important anti-inflammatory effects in pul- drug (NSAID) induced asthma [3], and involvement in the devel-
opment of asthma and COPD [4]. Lung diseases such as pulmonary
artery hypertension (PAH) are treated with PGI2 mimetics, which
greatly improve the symptoms but fail to reverse or cure the vas-
∗
Corresponding author at: Pharmacy, Pharmacology and Postgraduate Medicine, cular remodelling. The use of PGI2 mimetics in the clinic has so far
School of Life and Medical Sciences, University of Hertfordshire, College Lane, Hat- only attempted to replace the acute IP receptor mediated changes
field AL10 9 AB, UK.
related to PGI2, and have not yet attempted to mimic the genomic
E-mail addresses: [email protected], [email protected]
changes affected by PGI2 binding to nuclear receptors. Before this (L.S. Mackenzie).
http://dx.doi.org/10.1016/j.prostaglandins.2015.12.002
1098-8823/© 2015 Elsevier Inc. All rights reserved.
N. Perez Diaz et al. / Prostaglandins & other Lipid Mediators 122 (2016) 18–27 19
can be attempted we need to address our understanding of how the Luciferase Detection Reagent added. Light emission from each
PGI2 and mimetics signal via nuclear receptors. sample well was quantified using a plate reading luminometer.
PGI2 has been described as the putative endogenous ligand for In order to assess TR␣ and TR antagonistic activities the proto-
peroxisome proliferator activated receptor /␦ (PPAR/␦) nuclear col was adjusted; Reporter Cells were exposed to a sub-maximal
receptors [5]. Signalling via PPAR/␦ has a number of effects on concentration of a suitable agonist: dexamethasone for the GR
cell function and has been shown to be involved in fatty acid assay and T3 for TR␣ and TR assays, followed by increasing con-
metabolism, lipid transport as well as proliferation and differentia- centrations of GW0742 and beraprost.
tion of cells. There are a large number of PPAR/␦ agonists, both
endogenously produced (PGI2, fatty acids including the ‘omega 2.3. Myography
3’ fatty acids) and synthetic compounds (GW0742, GW501516),
however the use of PPAR/␦ agonists in different cellular models Male Wistar rats (350–450 g) were housed in pairs, and killed
and at widely differing concentrations has led to a controversy in by CO2 asphyxiation. The care and use of the rats were carried
regards to the role of PPAR/␦ in the cell [6]. The PPAR/␦ agonist out in accordance with UK Home Office regulations, UK Animals
GW501516 completed proof-of-concept clinical trials successfully (Scientific Procedures) Act of 1986 under PPL70/6788.
for dyslipidaemia [7] and hypercholesteraemia [8], although fur- First and second order mesenteric arteries were removed and
ther clinical trials were halted due to toxicology issues [9]. Since prepared as described previously [14]. Briefly, artery segments
−3
×
this point, much interest has gathered as to the use of PPAR/␦ were dissected in Kreb’s buffer (pH 7.4, 1.18 10 mol/L NaCl,
−3 −3 −3
× × ×
agonists in various disease settings, as the nuclear receptor has 4.7 10 mol/L KCl, 1.2 10 mol/L MgSO4, 1.2 10 mol/L
−3 −2
× ×
multiple regulatory roles in cell function and differentiation from KH2PO4, 2.5 10 mol/L CaCl2, 2.5 10 mol/L NaHCO3 and
−2
×
controlling smooth muscle tone to remodelling of the pulmonary 1.1 10 mol/L glucose), and loaded onto isometric wire myo-
circulation [9–11]. graphs. The bath solution was continuously bubbled with 95% O2
There are fundamental questions as to the long term direct and 5% CO2. All vessels were allowed to equilibrate for 30 min prior
actions of PGI2 and related compounds on the cell and the wide to being set at a ‘normalised’ internal circumference 0.9.L100; this
variety of receptors which remain to be addressed. The aim of this is estimated to be 0.9 times the circumference they would main-
study was to identify novel binding targets of PGI2, and other lipid tain if relaxed and exposed to 100 mm Hg transmural pressure. This
mediators using computational chemistry methods, validated on was calculated for each individual vessel on the basis of passive
gene reporter assays and alterations to vascular function measured length-tension characteristics of the artery and the Laplace rela-
by myography. tionship [15]. The average diameter of the mesenteric arteries were
239.4 ± 10.9 m.
−5 −5
Arteries were incubated with 10 mol/L MLS, 10 mol/L
2. Materials and methods −7
beraprost or 10 mol/L GW0742 for 30 min prior to addition of
−9 −6
increasing concentrations of U46619 (10 mol/L to 10 mol/L).
2.1. In silico methods
Arteries were washed four times with Krebs buffer, and once
tone had returned to basal levels, arteries were incubated with
OpenVirtualToxLab .5,21 [12] was used to predict toxic poten-
MLS, beraprost and GW0742 for a further 15 min. Arteries were
tial by predicting binding affinities to 10 nuclear receptors. The −7
then pre-contracted with 3 × 10 mol/L U46619; once plataeu was
default values of the software for the predictions of toxic potentials
acheived, vasodilation in response to increasing concentrations of
for prostacyclin, beraprost and GW0742 were used as described −10 −7
l-triiodothyronine (T3; 10 to 3 × 10 mol/L) was measured.
previously [12].
The Pharmmapper, freely available web server (http://59.78.96.
2.4. Materials
61/pharmmapper), was used to predict potential target candidates
for all drugs. The mol2 files for all molecules were submitted to
All chemicals and reagents were obtained from Sigma Aldrich
the Pharmmapper server by using default settings and limiting the
unless otherwise stated. Drugs were dissolved in DMSO to a stock
target set to human targets [13]. −2
of 10 mol/L, and then further dilutions made in water for further
The ability of drugs to bind into protein active sites was investi-
dilutions.
gated using Glide (Small-molecule Drug Discovery Suite 2014-3:
Glide, Version 6.4 Schrödinger, LLC, New York, NY (2014)) with
2.5. Data analysis
Maestro as a graphical user interface. The protein preparation wiz-
ard was utilized to adjust charges and protonation states of proteins
Reporter assay data are expressed as a mean ± SEM percent
using relevant data bank entries, 1Q4X for TR, 1NAV and 4LNX
induction, with 100% induction defined as the activity achieved
for TR␣, and 3GZ9 for, PPAR␦. Prepared protein structures were −7
with 10 mol/L of T3.
used to build energy grids with enclosing boxes of default sizes
Contractile data are expressed in changes in tension (mN) minus
centred on co-crystalized ligands. The molecules PGI2, beraprost
baseline tension. Vasodilation is expressed as percentage of the
and GW0742 were docked flexibly using XP docking protocol;
U46619 mediated pre-contraction obtained prior to the addition
ligands were minimized onto OLSA-2005 non-bonded interaction
of T3. Data are presented as mean ± SEM; n refers to the number
grid, with all other parameters set to their default values.
of rats used. Statistical analysis was performed by two way anal-
ysis of variance using GraphPad Prism 5.0, and differences were
2.2. Reporter assays considered to be significant when P was less than 0.05.
Human TR␣, TR and glucocorticoid reporter (GR) assay sys- 3. Results
tems were purchased from INDIGO Bioscience (State College, PA).
Assays were performed according to the manufacturer’s instruc- 3.1. Virtualtox screening and docking programmes
tions for both agonist and antagonist activity. Briefly, reporter cells
were dispensed into the wells of the assay plate and immediately Using the Virtualtox screening programme, structures for PGI2,
dosed with l-triiodothyronine (T3), beraprost and GW0742. Fol- beraprost and GW0742 were assessed for the potential binding to a
◦
lowing 24 h incubation at 37 C, treatment media was discarded and series of target protein known to be correlated with the side effects,
20 N. Perez Diaz et al. / Prostaglandins & other Lipid Mediators 122 (2016) 18–27
Table 1
predicted binding profile of the three molecules with PPAR␦
In silico modelling of PGI2, beraprost and GW0742 to nuclear receptors.
(Table 3), that indicated a propensity that all three molecules will
␦
Predicted EC50 (mol/L) have affinity for a binding site of crystal structure of PPAR (PDB
entry 1Y0S). However, a more recent structure of PPAR␦ (PDB
PGI2 Beraprost GW0742
entry 3GZ9) with resolution of 2 Å was selected for the docking
−7 −7 −8
AR 7.39 × 10 4.56 × 10 9.75 × 10
−5 −7 −6 analysis as a suitable model for in silico studies [16].
Er␣ 2.76 × 10 7.45 × 10 1.35 × 10
 × −5 −6 −6 All three ligands have a propensity to form polar interactions
× × Er 2.93 10 5.35 10 2.09 10
−9 −10 −9
␦
GR 1.36 × 10 9.25 × 10 4.18 × 10 with residues of PPAR binding site by forming hydrogen bonds
−8 −8 −9
× × ×
LXR 2.50 10 2.13 10 1.33 10 with H323, H449 and Y473 residues (Fig. 4), however, minor differ-
−7 −6 −7
MR 9.06 × 10 2.81 × 10 1.50 × 10
ences were observed in their spatial occupancy of the active site.
−7 −8 −8
PPAR␥ 4.81 × 10 5.93 × 10 1.02 × 10
␦
−8 −9 −9 The PGI2 binding to its putative nuclear receptor PPAR indicates
PR 4.31 × 10 2.51 × 10 9.87 × 10
− − −
6 8 8 a similarity in interaction profile (Fig. 5B) to that of the known ago-
␣ × ×
TR 3.44 10 65.5 10 1.28 × 10
−8 −8 −9

× ×
TR 16.6 10 5.51 10 7.73 × 10 nist GW0742, yet some differences were observed between binding
Charge −1 −1 −1
profiles of PGI2 and beraprost (Fig. 5A), which does not activate
ToxPot 0.67 0.70 0.67
PPAR␦ (data not shown). However, these differences in the inter-
actions may not be a main reason to lack of activation of PPAR␦ by
beraprost, it can be hypothesised that beraprost has higher affinity
and a normalized toxicity potential was calculated (Table 1). The
towards other intracellular targets.
results suggest that PGI2, beraprost and GW0742 have the potential
to bind most nuclear receptors, albeit with various affinities. The
3.3. Reporter assays: genomic effects
overall predicted toxicity potentials were 0.67 for PGI2, 0.70 for
beraprost and 0.67 for GW0742. These values indicate that have
In silico data indicated a potential for PGI2 to bind a wide range
potential to induce side effects to similar extent as chlomazone,
of nuclear receptors, most notably AR, GR, LXR, PR, TR␣ and TR
and bisphenol B.
(Table 1) although further analysis in vitro was not possible due
Data presented indicates the predicted EC50 of PGI2, beraprost
to the short half-life of PGI2 (42 s). Although our results indicated
and GW0742 to 10 nuclear receptors; Androgen Receptor (AR),
a potential for beraprost and GW0742 to bind to glucocorticoid
Estrogen receptor ␣ (ER␣), Estrogen receptor  (ER), Gluco-
receptor, none of the compounds tested exhibited agonist (data not
corticoid receptor (GR), Liver X receptor (LXR), Mineralcotocoid
shown) or antagonist properties using the GR luciferase reporter
receptor (MR), PPAR␥, Progesterone receptor (PR), Thyroid hor-
assay (Figs. 6A and B ).
mone receptor ␣ (TR␣) and Thyroid hormone receptor  (TR).
Similarly, a potential for beraprost and GW0742 to bind to
Binding potential is indicated by mol/L and ToxPot is a measure of
TR␣ and TR were predicted, none of the compounds elicited
a toxic potential, a normalized binding affinity in respect to a series
agonist properties using the TR␣ and TR luciferase reporter
of protein models with known adverse effects.
assays (data not shown). However, further TR␣ and TR reporter
The results indicated that the initial assumption that PGI2 and
assays were run using an antagonist protocol, incubating reporter
mimetics may interact with nuclear receptors was correct and war- −7
cells with 10 mol/L T3 (a TR␣ and TR agonist) and then
ranted further investigation. As proof of principle, we investigated
increasing concentrations of beraprost and GW0742. Interestingly,
the potential for PGI2, beraprost and GW0742 to bind to TR. The
beraprost inhibited T3 induced TR␣ luciferase activity with an
predicted binding affinities of drugs to TR by PGI2, beraprost and −5 −5
IC50 3.15 × 10 mol/L and GW0742 IC50 2.6 × 10 mol/L (Figs.
GW0742 were in the nanomolar range (Table 1).
6C and D). Results from the TR luciferase activity indicate that
The possibility that PGI2, beraprost and GW0742 could bind −5
beraprost exhibits an IC50 4.1 × 10 mol/L and GW0742 IC50
to these thyroid hormone receptors was further investigated by −6
1.02 × 10 mol/L (Figs. 6E and F); this indicates that the binding
using the reverse docking platform Pharmmapper. PGI2, beraprost
affinities of beraprost and GW0742 to TR␣ and TR may be greater
and GW0742 structures were submitted to the webserver and
to the binding affinities of agonist T3.
the ability to bind to TR was demonstrated as a list of possi-
In order to determine whether beraprost and GW0742 antag-
ble protein data bank files in whose active sites these two drugs
onism of TR non-genomic mediated activities, we performed
could favourably bind (Table 2). The docking analysis was carried
isometric wire myography of rat mesenteric arteries. The TR antag-
out using TR crystal structure with three different ligands, PGI2,
onist MLS has no effect on U46619 mediated contraction (Fig. 7A).
beraprost and GW0742 (Fig. 1) which identified a shared affinity −4
The presence of 10 mol/L l-NAME significantly increased U46619
to residue R282 within the ligand binding TR pocket. Due to the
mediated contraction of rat mesenteric arteries (Fig. 7B) whilst
similarities between TR and TR␣, docking analysis was also car- −5 −7
10 mol/L beraprost (Fig. 7C) and 10 mol/L GW0742 signifi-
ried out with the TR␣ crystal structure with PGI2, beraprost and
cantly reduced U46619 contraction (Fig. 7D).
GW0742. TR␣ has two known binding sites, so docking analysis
was conducted for both separate binding sites (Figs. 2 and 3).
3.4. Myography: non-genomic effects of TR
Having two published ligand binding sites, docking analysis
using TR␣ crystal structure was carried out with three different
In order to test the antagonist potential of MLS, GW0742 and
ligands, PGI2, beraprost and GW0742 on both sites. The first site
beraprost on T3 induced vasodilation, arteries were pre-contracted
is located in a similar pocket within the protein, and is similar in
with U46619. Addition of the compounds effected the EC80 U46619
structure to TR ligand binding site (Fig. 2). Analysis predicts the
induced tone, control 11.95 ± 2.5mN, l-NAME 14.96 ± 2.3 mN,
binding of residues R228 and R262 is common to PGI2, beraprost
beraprost 4.435 ± 1.9 mN and GW0742 7.8 ± 3.7 mN.
and GW0742. On the other hand, the second TR␣ predicted binding −9 −7
Cumulative addition of T3 (10 to 3 × 10 mol/L) to U46619
profile shared the residues S326, Q342, W364, T372 and R375.
pre-contracted arteries induced a significant reduction in tension
in mesenteric arteries (Fig. 8). This vasodilatory effect was signifi-
3.2. PPARˇı docking cantly inhibited by incubation with the selective TR antagonist MLS
(Fig. 8A). Previous reports have indicated that T3 induced vasodi-
The Pharmamodels picked for further analysis were those that lation is mediated by a rapid non-genomic event involving eNOS
−4
shared 9 features in the predictive binding profile, similar to the activation [17]. In order to test this hypothesis, 10 mol/L l-NAME
N. Perez Diaz et al. / Prostaglandins & other Lipid Mediators 122 (2016) 18–27 21
Fig. 1. In silico docking analysis of ligands to TR. Docking analysis showing predicted binding poses of (A) PGI2, (B) beraprost and (C) GW0742 ligands in human TR (PDB
1Q4X). Ligands are represented by cylinders, side-chain residues of TR are represented by sticks; dashed lines represents hydrogen bond interactions to amino acid residues
in TR; transparent surfaces are coloured by electrostatic charges; side-chain residues shown are within 4 Å of bound ligand.
Fig. 2. In silico docking analysis of ligands to TR␣. Docking analysis showing predicted binding poses of (A) PGI2, (B) beraprost and (C) GW0742 ligands in human TR␣ (PDB
1NAV). Ligands are represented by cylinders, side-chain residues of TR␣ are represented by sticks; dashed lines represents hydrogen bond interactions to amino acid residues
in TR␣; transparent surfaces are coloured by electrostatic charges; side-chain residues shown are within 4 Å of bound ligand.
22 N. Perez Diaz et al. / Prostaglandins & other Lipid Mediators 122 (2016) 18–27
Fig. 3. In silico docking analysis of ligands to the second binding site of TR␣. Docking analysis showing predicted binding poses of (A) PGI2, (B) beraprost and (C) GW0742
ligands in human TR␣ (PDB 4LNX). Ligands are represented by cylinders, side-chain residues of TR␣ are represented by sticks; dashed lines represents hydrogen bond
interactions to amino acid residues in TR␣; transparent surfaces are coloured by electrostatic charges; side-chain residues shown are within 4 Å of bound ligand.
Fig. 4. In silico docking analysis of ligands to PPAR␦ receptor. Docking analysis showing predicted binding poses of (A) PGI2, (B) beraprost and (C) GW0742 ligands in human
PPAR␦ (PDB 3GZ9). Ligands are represented by cylinders, side-chain residues of PPAR␦ are represented by sticks; dashed lines represents hydrogen bond interactions to
amino acid residues in PPAR␦; transparent surfaces are coloured by electrostatic charges; side-chain residues shown are within 4 Å of bound ligand.
N. Perez Diaz et al. / Prostaglandins & other Lipid Mediators 122 (2016) 18–27 23
Table 2
The ranked list of hit target pharmacophore models for PGI2, beraprost and GW06742 obtained using Pharmmapper webserver. The list is sorted by number of feature
interactions and filtered to show PGI2, beraprost and GW0742 hits for TR, where Pharma Model indicates the relevant PDB entry.
Molecule Pharma model No. feature Fit No. hydro-phobic No. HB acceptor No. HB donor No. +ve No. −ve No. aromatic
PGI2 1nuo v 7 4.09 4 1 1 0 1 0
Beraprost 1n46 v 7 4.65 4 1 1 0 0 1
Beraprost 1nax v 7 4.40 4 1 1 0 1 0
Beraprost 1nq1 v 7 4.36 4 1 1 0 1 0
GW0742 1nuo v 7 4.23 4 1 1 0 1 0
GW0742 1nq1 v7 4.06 4 1 1 0 1 0
GW0742 1nq2 v 7 3.76 4 1 1 0 1 0
Beraprost 1r6g v 8 4.51 5 1 1 0 1 0
GW0742 1r6g v 8 3.75 5 1 1 0 1 0
PGI2 1q4x v 9 4.58 6 2 0 0 1 0
Beraprost 1q4x v 9 5.10 6 2 0 0 1 0
GW0742 1q4x v9 4.03 6 2 0 0 1 0
Table 3
The ranked list of hit target pharmacophore models for PGI2, beraprost and GW06742 obtained using Pharmmapper webserver. The list is sorted by number of feature
interactions and filtered to show PGI2, beraprost and GW0742 hits for PPAR␦, where Pharma Model indicates the relevant PDB entry.
Molecule Pharma model No. feature Fit No. hydro-phobic No. HB acceptor No. HB donor No. +ve No. −ve No. aromatic
PGI2 1y0s v 9 4.76 8 0 0 0 1 0
Beraprost 1y0s v9 4.80 8 0 0 0 1 0
GW0742 1y0s v 9 3.65 8 0 0 0 1 0
Fig. 5. Overlays of ligands in favourable docking poses in PPAR␦. Superposition of the most favourable docking pose obtained for ligands into active site of PPAR␦ (PDB
3GZ9) with the docking poses of (A) PGI2 (stick representation with grey carbon atoms) and Beraprost (gold carbon atoms); (B) PGI2 (with grey carbon atoms) and GW0742
(green carbon atoms) and (C) beraprost (blue carbon bonds) and GW0742 (orange carbon bonds) ligands into same active site.
was added to the bath prior to mesenteric artery contraction to 4.1. Interactions of ligands with TRˇ and TR˛
U46619. l-NAME had no significant effect on T3 induced vasodila-
tion (Fig. 8B). In contrast, incubation in the presence of beraprost The in silico binding profiles of beraprost, GW0742 and PGI2
(Fig. 8C) and GW0742 (Fig. 8D) significantly inhibited T3 induced to TR show remarkable similarities. Confirmation with luciferase
vasodilation of mesenteric arteries. reporter assay indicates that beraprost inhibited T3 induced TR
−5
gene induction with an IC50 4.1 × 10 mol/L and GW0742 IC50
−6
1.02 × 10 mol/L, which is comparable to the anti-thyroid hor-
4. Discussion −5
mone activity of bisphenol A IC50 1.64 × 10 mol/L [19]. The
docking profiles indicate a common interaction of all three
A link between PGI2 and thyroid function has previously been
molecules with R282 found in the TR Ligand–Binding Domain
established, whereby PGI2 increases thyroid hormone production
(LBD) which is involved in the genomic and non-genomic activity
[18]. The data presented here is the first to show that PGI2 has
of the nuclear receptor [20,21].
the potential to bind to TR and TR␣, and a range of other nuclear
While the LBD of TR and TR␣ differ by only one residue,
receptors which require further in depth study. While direct in vitro
sequence homology of the second binding domain indicates that
analysis is not possible due to the very short half-life of PGI2, we
the two TR proteins have an identical second binding site; how-
investigated the ability of the PGI2 mimetic, beraprost and GW0742
ever, the crystal structure of the second domain has only been
to bind to nuclear receptors. Our results indicated a potential for
described from TR␣ [22]. Our findings predict that PGI2, beraprost
PGI2, beraprost and GW0742 to bind to numerous nuclear recep-
and GW0742 have the common binding profile of R228 and R262
tors, notably AR, GR, LXR, PR, TR␣ and TR.
in the first binding site of TR␣, and share binding of residues S326,
For proof of concept we chose to investigate GR, TR and TR␣
Q342, W364, T372 and R375 in the second binding site of TR␣. There
further, due to the potential for beraprost and GW0742 to bind to
is an interesting commonality of the key residues involved in what
these nuclear receptors in the nanomolar range. The reporter assays
is thought to be a novel allosteric mechanism in which a high con-
indicated that beraprost and GW0742 lacked GR agonist and antag-
centration of T3 in the nucleus binds to R342 and R375 in the second
onist behaviour, indicating that the computer generated binding
site and interacts with T3 binding of R228 in the first site of TR␣ (or
profiles can only provide guidance and not replace in vitro testing.
24 N. Perez Diaz et al. / Prostaglandins & other Lipid Mediators 122 (2016) 18–27
−7
Fig. 6. Luciferase reporter gene assay of nuclear receptor antagonism. Reporter cells were activated with EC50 l-triiodothyronine (T3; 10 mol/L), and (A) and (B) Glucocor-
ticoid receptor (GR); (C) and (D) TR␣; (E) and (F) TR antagonist activity measured following incubation with increasing concentrations of beraprost and GW0742 for 24 h.
−7
Data are presented as mean ± SEM percent induction, with 100% induction defined as the activity achieved with 10 mol/L T3; n = 4–8.
R282 in TR) [22]. This novel allosteric interaction has been sug- timing of experiments, since initiation of either event is quite dif-
gested to be a mechanism by which TR activation is suppressed by ferent. Examples include the enhancement of the antiviral activity
high concentrations of the thyroid hormones in the nucleus, and of interferon ␥ by TR may be achieved by both genomic and non-
thereby reduce TR induction of transcription [22]. These similari- genomic routes; T4-dependent activation of the mitogen activated
ties in the predicted binding sites of PGI2, beraprost and GW0742 to protein kinase /extracellular signal-regulated kinase 1/2 (MAPK/
TR␣ and TR proteins give weight to our findings that beraprost and ERK1/2) which can phosphorylate serine (Ser142) located on DNA
GW0742 display antagonistic properties to these nuclear receptors, binding domain of TR [21]. This phosphorylation leads to dissocia-
evident especially at high concentrations. tion of TR from corepressor proteins, which trans- activates target
Our data indicates that PGI2, beraprost and GW0742 all exhibit genes. Yet TR antagonists which inhibit the non-genomic activity
both genomic and non-genomic TR␣ and TR activities, thus mak- blocks the T4 potentiation of the antiviral and immune-modulatory
ing a clear distinction between genomic and non-genomic effects actions of the interferon ␥, even though these antagonists lack any
difficult to make, and one which requires further exploration. The direct effect on the interferon-␥ action [24].
finding that both beraprost and GW0742 exhibit TR antagonist Thyroid hormones have been shown to act directly on coro-
properties highlights a strong possibility for PGI2 to also act as a nary artery smooth muscle cells [25] and rat mesenteric arteries
TR and TR␣ antagonist at high concentrations, and that the activity [26] to induce vasodilation in a non-genomic manner, occurring
may also have non-genomic effects on function. within a few minutes of stimulation [17]. The mechanism and
Surprisingly for a nuclear receptor, phosphorylated TR is receptors responsible for T3 mediated dilation is emerging in the
located at the plasma membrane or in the cytoplasm, which once literature, with one recent study in TR␣ knockout mouse mesen-
initiated may lead to complex, nucleus-mediated cellular events teric arteries lacking the T3 vasodilatory effect. Other studies have
leading to the transcription of genes including HIF1A MCL1 and shown that T3 activates TR which cross-couples to the phospho-
GLUT1 [23]. A distinction between the genomic and non-genomic inositol 3-kinase/protein kinase pathway [17], which in arterial
activities of TR may not be clear cut, since ligands such as T3 acti- endothelial cells, leads to eNOS activation and NO production of NO
vate both pathways. However a clear division can be made using the and thus induces dilation. Other members of the steroid hormone
N. Perez Diaz et al. / Prostaglandins & other Lipid Mediators 122 (2016) 18–27 25
−5 −4 −5 −7
Fig. 7. The effects of ligands on mesenteric artery contraction The effects of (A) 10 mol/L MLS, B. 10 mol/L l-NAME, (C) 10 mol/L Beraprost and (D)10 mol/L GW0742
on U46619 induced contraction. Data are presented as mean ± SEM, and significance is represented as * = p < 0.05, ** = p < 0.01, *** = p < 0.001 by two way ANOVA and f = p < 0.05
and fff = p< 0.001 by Bonferroni post hoc test; ns = non-significant.
−7
Fig. 8. The effects of ligands on mesenteric artery vasodilation. T3 induced vasodilation in mesenteric arteries pre-contracted with EC80 U46619 (3 × 10 mol/L), in the
−4 −5 −7
presence of (A) MLS, (B) 10 mol/L l-NAME, (C) 10 mol/L Beraprost and (D) 10 mol/L GW0742. Data are presented as mean ± SEM, and significance is represented as
***p = <0.001 by two way ANOVA and f = p < 0.05, ff = p< 0.01 and fff =p < 0.001 by Bonferroni post hoc test, and non-significance by ‘ns’.
superfamily have been shown to cross couple with the PI3- vasodilation of rat mesenteric arteries is not directly dependent
 ␦ kinase/Akt pathway, including PPAR / [27] and glucocorticoid on NO production [25,26]. Here we show that full dilation is
−7
receptors [28] indicating that non-genomic control of steroidal achieved at 3 × 10 mol/L T3, which was significantly reduced by
receptors play an important role in vascular homeostasis. Our data incubation with the TR antagonist MLS. While MLS cannot differ-
is in agreement with a similar study showing that T3 mediated entiate between TR␣ and TR [29], without further study we can
26 N. Perez Diaz et al. / Prostaglandins & other Lipid Mediators 122 (2016) 18–27
only conclude that T3 induces vasodilation in rat mesenteric arter- Source of funding
ies that is TR␣ and TR mediated and not dependent on nitric oxide
synthase. The conduct of the research and preparation of the article was
As expected, MLS had no significant effect on U46619 medi- funded by the University of Hertfordshire, UK.
ated contraction, indicating that TRs are not involved in contractile
responses. Beraprost is an IP agonist, so the significant reduction Disclosure
in U46619 induced tone is likely to be due to the dilatory effect on
the smooth muscle cells. Contraction was achieved however, albeit The authors declare that there is no conflict of interest regarding
at a reduced level, and T3 mediated vasodilation was significantly the publication of this article.
reduced. Taking the results together this suggests that beraprost
is binding to and inactivating TR non-genomic activity in smooth Acknowledgements
muscle cells.
3R
In a similar manner, GW0742 reduced arterial contraction. This Authors thank to Biograf for the license to use OpenVirtual-
is a phenomenon previously reported [9,10], although not fully ToxLab software. We also thank Open Eye Scientific Software, Inc.,
explained. The addition of GW0742 significantly reduced T3 medi- for the free academic license of the Open Eye Toolkits. We also
ated vasodilation, which may be due to the direct binding of thank Schrodinger Ltd., for their support in the final stages of the

GW0742 to TR in smooth muscle cells as predicted by the in silico manuscript revision by providing the license for their software.
modelling and reporter assays.
The normal physiological range of total T3 in the human plasma References
−9
is between 1 and 2.9 × 10 mol/L, concentrations which did not
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