A Revised Circumscription for the Blakeeae (Melastomataceae)
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Additions to the Flora of Panama, with Comments on Plant Collections and Information Gaps
15 4 NOTES ON GEOGRAPHIC DISTRIBUTION Check List 15 (4): 601–627 https://doi.org/10.15560/15.4.601 Additions to the flora of Panama, with comments on plant collections and information gaps Orlando O. Ortiz1, Rodolfo Flores2, Gordon McPherson3, Juan F. Carrión4, Ernesto Campos-Pineda5, Riccardo M. Baldini6 1 Herbario PMA, Universidad de Panamá, Vía Simón Bolívar, Panama City, Panama Province, Estafeta Universitaria, Panama. 2 Programa de Maestría en Biología Vegetal, Universidad Autónoma de Chiriquí, El Cabrero, David City, Chiriquí Province, Panama. 3 Herbarium, Missouri Botanical Garden, 4500 Shaw Boulevard, St. Louis, Missouri, MO 63166-0299, USA. 4 Programa de Pós-Graduação em Botânica, Universidade Estadual de Feira de Santana, Avenida Transnordestina s/n, Novo Horizonte, 44036-900, Feira de Santana, Bahia, Brazil. 5 Smithsonian Tropical Research Institute, Luis Clement Avenue (Ancón, Tupper 401), Panama City, Panama Province, Panama. 6 Centro Studi Erbario Tropicale (FT herbarium) and Dipartimento di Biologia, Università di Firenze, Via La Pira 4, 50121, Firenze, Italy. Corresponding author: Orlando O. Ortiz, [email protected]. Abstract In the present study, we report 46 new records of vascular plants species from Panama. The species belong to the fol- lowing families: Anacardiaceae, Apocynaceae, Aquifoliaceae, Araceae, Bignoniaceae, Burseraceae, Caryocaraceae, Celastraceae, Chrysobalanaceae, Cucurbitaceae, Erythroxylaceae, Euphorbiaceae, Fabaceae, Gentianaceae, Laciste- mataceae, Lauraceae, Malpighiaceae, Malvaceae, Marattiaceae, Melastomataceae, Moraceae, Myrtaceae, Ochnaceae, Orchidaceae, Passifloraceae, Peraceae, Poaceae, Portulacaceae, Ranunculaceae, Salicaceae, Sapindaceae, Sapotaceae, Solanaceae, and Violaceae. Additionally, the status of plant collections in Panama is discussed; we focused on the areas where we identified significant information gaps regarding real assessments of plant biodiversity in the country. -
Liber Amicorum Prof. Dr. Ir. R.A.A. Oldeman
25 Jaar een ”Boom der vrijheid” Liber Amicorum Prof Dr Ir R.A.A. Oldeman Edited by Hans Vester, Paul Romeijn and Hans van der Wal Treemail publishers Heelsum, The Netherlands Treebook 8 October 2004, ISBN 90-804443-9-1 Treemail Publishers, Heelsum, The Netherlands Earlier in the series: Treebook 1: Struggle of Life: or the natural history of stress and adaptation. Martial and Line Rossignol, Roelof A. A. Oldeman and Soraya Benzine-Tizroutine; 1998. Treebook 2: Green Gold: on variations of truth in plantation forestry. Paul Romeijn; 1999. Treebook 3: Chinantec shifting cultivation: InTERAcTIVE landuse. A case-study in the Chinantla, Mexico, on secondary vegetation, soils and crop performance under indigenous shifting cultivation. Hans van der Wal; 1999. Treebook 4: An exploratory study to improve the predictive capacity of the Crop Growth Monitoring System as applied by the European Commission. Iwan Supit; 2000. Treebook 5: Five thousand years of sustainability? A case study on Gedeo land use (Southern Ethiopia). Tadesse Kippie; 2002. Treebook 6: Let them eat grass: Understanding pasture-finished beef cattle farms in the American Appalachians. Jane Shaw; 2002. Treebook 7: Updated system description of the WOFOST crop growth simulation model as implemented in the Crop Growth Monitoring System applied by the European Commission. Supit, I.; Van der Goot, E.; Editors; January 2003. © 2004, Copyright by Treemail. All rights reserved. No part of these materials may be reproduced, or stored in a retrieval system, or transmitted, in any form, or by any means, electronic, mechanical, photocopying, recording, or otherwise, without the prior written permission of the copyright owner. -
Melastomataceae
Acta Bot. Need. 28 (1), February 1979,p. 21-43, Wood anatomy of the Blakeeae (Melastomataceae) 2 11 J.Koek-Noorman1,P. Hogeweg W.H.M. van Maanen and B.J.H. ter , 1 Welle 1. Instituutvoor Systematische Plantkunde,Utrecht 2. Subfakulteit Biologie;Bioinformatica, Utrecht CONTENTS 1. Introduction 2. Material 3. Light-microscopical investigations 3,1. Methods 3.2. Descriptions of Blakea, Topobea, and Huilaea 3.3 Discussion 4. S.E.M. investigationof pit vestures 4.1. Methods 4.2. Results 4.3. Discussion 5. Numerical analysis ofa data set of wood anatomical characters of Blakeeae and Miconieae, 5.1. Methods 5.2, Results 5.3. Discussion 6. Conclusions SUMMARY The present paper deals with the wood anatomy of the Blakeeae (Melastomataceae). Generic de- scriptions ofthe secondary xylemof Blakea and Huilaea are given and comparedwith data , Topobea, on 16 genera ofthe Miconieae, Numerical pattern detection was undertaken. The results confirm our preliminary ideas that Blakea and Topobea do not differ enough to enable the separation of these genera on the basis oftheir wood anatomy. Within the Miconieae it is not possible to separate the anatomical differences between the tribes found. The Huilaea genera. However, some two were genus seems to belong in the Blakeeae although it also shows similarities with the Miconieae. Wurdack’s that the Blakeeae closest the and and suggestion(pers. comm.) are to genera Loreya Bellucia, perhaps should be merged with the Miconieae,is supported to some degree. 1. INTRODUCTION forms of of overall into the The present paper part a project an investigation comparative woodanatomyofthe Myrtales. -
Genome Assembly and Phylogenomic Data Analyses Using Plastid Data: Contrasting Species Tree Estimation Methods
Data in brief 25 (2019) 104271 Contents lists available at ScienceDirect Data in brief journal homepage: www.elsevier.com/locate/dib Data Article Genome assembly and phylogenomic data analyses using plastid data: Contrasting species tree estimation methods * D.J.P. Gonçalves a, , B.B. Simpson a, G.H. Shimizu b, R.K. Jansen a, c, E.M. Ortiz d a Department of Integrative Biology, The University of Texas at Austin, 2415 Speedway #C0930, Austin, TX, 78713, USA b Department of Plant Biology, University of Campinas, 13083-970, Campinas, SP, Brazil c Genomics and Biotechnology Research Group, Department of Biological Sciences, Faculty of Science, King Abdulaziz University, Jeddah, 21589, Saudi Arabia d Department of Ecology & Ecosystem Management, Plant Biodiversity Research, Technical University of Munich, Emil-Ramann Strasse 2, Freising, D-85354, Germany article info abstract Article history: Phylogenomics has become increasingly popular in recent years Received 14 June 2019 mostly due to the increased affordability of next generation Received in revised form 4 July 2019 sequencing techniques. Phylogenomics has sparked interest in Accepted 9 July 2019 multiple fields of research, including systematics, ecology, Available online 27 July 2019 epidemiology, and even personalized medicine, agriculture and pharmacy. Despite this trend, it is usually difficult to learn and un- Keywords: derstand how the analyses were done, how the results were ob- Data processing Genome assembly tained, and most importantly, how to replicate the study. Here we Phylogenetic analyses present the data and all of the code utilized to perform phyloge- Phylogenetic signal nomic inferences using plastome data: from raw data to extensive Tree space phylogenetic inference and accuracy assessment. -
Cladistic Analysis
PHYLOGENY AND CHARACTER EVOLUTION IN THE BLAKEEAE (MELASTOMATACEAE) By DARIN S. PENNEYS A DISSERTATION PRESENTED TO THE GRADUATE SCHOOL OF THE UNIVERSITY OF FLORIDA IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY UNIVERSITY OF FLORIDA 2007 1 © 2007 Darin S. Penneys 2 To my family 3 ACKNOWLEDGMENTS I acknowledge the assistance of numerous people and organizations that have contributed to the success of this investigation. First and foremost, I thank my advisor and committee chairperson, Walter S. Judd, for his exceptional guidance throughout my graduate career. Frank Almeda has generously shared his wisdom and insights regarding Melastomataceae systematics. Norris H. Williams and W. Mark Whitten provided assistance with DNA sequencing. Doug E. Soltis and Jon Reiskind are acknowledged for their helpful comments. Amongst the people who assisted with fieldwork, or who provided collections, a special gratitude is extended to Diana Férnandez who accompanied me in the field in Ecuador, and later arranged for the liberation from governmental control the entire set of collections from that expeditition. Maria-Eugenia Morales-P. is gratefully acknowledged for sharing collections of Colombian melastomes, and also for her ongoing collaborations. Ricardo Kriebel and Frank Almeda for providing material of Blakea venusta and T. gerardoana; Bill Haber for bringing me to material of T. brenesii; Fabian Michelangeli for B. schlimii; Barry Hammel for his help in finding B. austin-smithii on Cerro Chompipe; J. Richard Abbott for T. calycularis; Chris Baraloto for collections of Bellucia, Henriettea, Loreya, and Votomita; and Judy Chen for Astronia and Pternandra. Mario Blanco assisted with fieldwork in Costa Rica and Panamá. -
Lianas No Neotropico
Lianas no Neotrópico parte 4 Dr. Pedro Acevedo R. Museum of Natural History Smithsonian Institution Washington, DC 2018 Eudicots: Core Eudicots: Rosids * * Eudicots: •Rosids: Myrtales • Combretaceae • Melastomataaceae Eurosids 1 Celastrales o Celastraceae Malpighiales o Dichapetalaceae o Euphorbiaceae o Malpighiaceae o Passifloraceae o Trigoniaceae o Violaceae Oxalidales o Connaraceae Fabales oFabaceae o Polygalaceae Rosales o Cannabaceae o Rhamnaceae Cucurbitales o Cucurbitaceae o Begoniaceae Myrtales Combretaceae 400 spp; 20 gêneros árvores, arbustos, lianas Ca. 33 spp de trepadeiras no Neotrópico Combretum 270 spp/33 spp Combretum sp Combretaceae • cálice cupular, 4-5-mero • pétalas minúsculas ou ausentes • estames 8-10 • ovário ínfero, 2-5 carpelos • frutos secos, 4-5-alados Dicas: muitas especies amostran folhas Alternas nos ramos jovens e nos adultos folias oppostas uu subopostas Combretaceae Combretum indicum invasora no Neotrópico Combretum decandrum: gemas protuberantes Combretum decandrum spinhos formados por a base persistente dos petiolos Caules simples, raios imperceptíveis; floema intraxilematico Secreção mucilaginosa no caule Combretum fruticosum Myrtales Melastomataceae 4000 spp; 200 gêneros árvores, arbustos, algumas trepadeiras. 16 gêneros e ca. 100 spp de trepadeiras no Neotrópico Blakea 45 spp Miconia 24 spp Adelobotrys 22 spp Clidemia 13 spp http://botany.si.edu/lianas/docs/Melastomataceae.pdf Melastomataceae • flores 4-5-meras • cálice valvar ou caliptrado • pétalas livres • estames 8-10, anteras poricidas, às vezes -
Diversity and Evolution of Rosids
*Malvales • strongly supported order of Diversity and Evolution 11 families of Rosids Malvaceae . cacao, mustard, and capers . Cistaceae Dipterocarpaceae *Malvales *Malvaceae - mallows • strongly supported order of • Malvaceae is now “broadly” 11 families defined (includes Tiliaceae, Sterculiaceae, Bombacaceae) • (+/-) suite of wood, hair, leaf, and chemical features • 243 genera / 4300 species Bixaceae Malvaceae 1 *Malvaceae - mallows *Malvaceae - mallows 1. leaves palmately veined 4. Many stamens, often bundled, (simple or compound) sometimes monadelphous into a staminal tube 2. sepals valvate - not overlapping CA 5 CO 5 A (∞) G (5-∞) Sparmannia 3. stellate hairs Trichospermum Sphaeralcea Hibiscus trionum Hibiscus tiliaceus Grewia Hibiscus *Malvaceae - mallows *Malvaceae - mallows “malvoids” “malvoids” Althaea - hollyhock, marsh mallow Gossypium - cotton Malva - mallow, Napaea dioica cheese - glade mallow Hibiscus • only Midwestern endemic genus 2 *Malvaceae - mallows *Malvaceae - mallows “tilioids” “bombacoids” Adansonia - baobabs Trichospermum Tilia americana - Central America basswood, linden Pseudobombax Grewia Madagascar *Malvaceae - mallows *Brassicales “sterculoids” • 17 families • morphologically diverse! glucosinolates myrosinase enzyme isothiocynates mustard oils Theobroma - “food of the gods,” cacao, chocolate Cola 3 *Brassicales *Brassicales Capparaceae - capers Caricaceae - papaya Tropaeolaceae - garden nasturtium Cardinal-McTeague, W. M., K. J. Sytsma, J. C. Hall. 2016. Biogeography and diversification of Brassicales: -
Lianas Neotropicales, Parte 4
Lianas Neotropicales parte 4 Dr. Pedro Acevedo R. Museum of Natural History Smithsonian Institution Washington, DC 2018 Eudicots: Core Eudicots: Rosids * * Eudicots: •Rosids: Myrtales • Combretaceae • Melastomataaceae Eurosids 1 Celastrales o Celastraceae Malpighiales o Dichapetalaceae o Euphorbiaceae o Malpighiaceae o Passifloraceae o Trigoniaceae o Violaceae Oxalidales o Connaraceae Fabales oFabaceae o Polygalaceae Rosales o Cannabaceae o Rhamnaceae Cucurbitales o Cucurbitaceae o Begoniaceae Myrtales Combretaceae 400 spp; 20 géneros árboles, arbustos, lianas Ca. 33 spp de lianas en el Neotrópico Combretum 270 spp/33 spp Combretum sp Combretaceae • cáliz cupular, 4-5-mero • pétalos minúsculos o ausentes • estambres 8-10 • ovário ínfero, 2-5 carpelos • frutos secos, 4-5-alados Combretaceae Combretum indicum invasora en el Neotrópico Combretum sp Tallos volubles Combretum decandrum: yemas protuberantes Combretum decandrum, espinas formadas por la base persistente do los peciolos Combretum sp Combretum sp Combretum sp Combretum sp tallos simples, rayos imperceptibles; floema intraxilemático Combretum sp Secreción mucilaginosa en el tallo Combretum sp Combretum fruticosum Myrtales Melastomataceae 4000 spp; 200 géneros árboles, arbustos, algunas lianas 16 géneros y ca. 100 spp de lianas en el Neotrópico Blakea 45 spp Miconia 24 spp Adelobotrys 22 spp Clidemia 13 spp http://botany.si.edu/lianas/docs/Melastomataceae.pdf Melastomataceae • flores 4-5-meras • cáliz valvar o caliptrado • pétalos libres • estambres 8-10, anteras poricidas, a veces com apéndices • ovário ínfero • frutos variados Melastomataceae Adelobotris sp. voluble Adelobotris klugii Adelobotris sp. Con raíces adherentes Adelobotris sp. Escandente Clidemia sp Escandente Adelobotrys sp Corte transversal del tallo Celastrales Celastraceae 1350 spp; 92 géneros arbustos, árboles, lianas Distribución mundial 15 géneros y ca. -
Correlations Among Fruit Traits and Evolution of Different Fruits Within
BolankdJournul oJ/h Linnean Sociplv (20OO), I.?.?: 303-326. With G figures doi:l0.lOOS/lmjl. 1999.0340, available online at http://www.idealibrary.rom on I hi" Correlations among hittraits and evolution of different hits within Melastomataceae GUDRUN CLAUSING'*, KARSTEN MEYER' AND SUSANNE S. RENNER' 'Institut$r Spezielh Botanik, Universitat Main<, 0-55099 Main< Germany, 'Department of Biology, Universip of Missouri-St. Louis, 8001 Natural Bridge Rd., St. Louis, M063121- 4499, us;4 RecciwdJu~1999; accepted for publicdwn Februaty 2000 The anatomy and morphology of nearly mature fruits in 85 mainly palaeotropical species of Melastomataceae were examined using microtome- and hand-sectioning, and differential staining. Much structural heterogeneity was observed in both capsules and berries. Mul- tivariate analyses of 31 of the 52 characters recorded for each species, revealed that indehiscence is associated with fusion of ovary and hypanthium tissues, placenta persistence, lack of a persistent endocarp, and a dearth of srlereids in these tissues, while dehiscenre is correlated with the opposite states and a persistent exocarp. Other fruit characters such as lignification or fleshiness of tissues do not show a consistent association with dehiscence. Break down of broad fruit types, such as 'berry' and 'capsule', into their individual morphological and anatomical traits shows how unusual fruit types, such as woody berries, fleshy capsules, and capsules containing fleshy placentas (display fruits), which are common in palaeotropical Melastomeae and Dissochaeteae, contribute to a loosening of expected correlations. Thus, discriminant analysis clearly differentiated display fruits from the other fruit types because of their combination of fleshy placentas with a persistent endocarp and absence of ovary/hypanthium fusion. -
Nombre Científico: Palicourea Guianensis Aubl
Kimbi Nombre científico: Palicourea guianensis Aubl. Otro nombre común: Huisha micuna. Sinónimos: Nonatelia cataractarum (Müll. Arg.) Kuntze, Palicourea barbinervia DC., Palicourea brachyloba (Müll. Arg.) B.M. Boom, Palicourea grandifolia (Willd. ex Schult.) Standl., Palicourea hypomalaca Standl., Palicourea ma- crophylla (Kunth) Standl., Psychotria brachyloba Müll. Arg., Psychotria palicourea Sw., Simira palicourea (Sw.) Poir. Familia: RUBIACEAE Distribución: nativa, con distribución en Centroamérica, desde el sur de México, Las Antillas y en Sudamérica, des- de Colombia hasta Bolivia (Taylor & Anderson, 1999). En el Ecuador se encuentra en la costa, Andes y Amazonía, entre 500 y 1500 m s.n.m. Descripción: árbol o arbusto de 3 a 8 m de altura y 3 a 10 cm de DAP. Tallos solitarios o ramificados desde cerca de la base, corteza externa café e interna, amarilla; ramitas terminales redondeadas, glabras, oscuras al secarse, con estípulas interpeciolares bilobadas, unidas en la base y que envuelven el tallo. Hojas simples, opuestas con pecíolos de 2 a 4 cm de largo; lámina de 5 x 12 a 14 x 25 cm, de forma elíptica a ovada, margen entero, base de cuneada a agu- da y ápice agudo o acuminado; textura membranácea; haz verde oscuro, glabro; envés verde claro, glabro o pubes- cente; nervio primario prominente en el haz y en el envés, nervadura secundaria, plana o ligeramente prominente en el haz y prominente en el envés, conformada por 14 a 16 pares de nervios que se originan en el nervio primario y forman ángulos de 70 a 80 grados respecto a este y al final se arquean hacia arriba y algunos se unen al siguiente nervio y otros desaparecen cerca del margen, nervadura terciaria perpendicular a la secundaria, visible solamente en el envés. -
Divergence Times, Historical Biogeography, and Shifts in Speciation Rates of Myrtales Q ⇑ Brent A
Molecular Phylogenetics and Evolution 95 (2016) 116–136 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Divergence times, historical biogeography, and shifts in speciation rates of Myrtales q ⇑ Brent A. Berger a,b, , Ricardo Kriebel b, Daniel Spalink b, Kenneth J. Sytsma b a Department of Biological Sciences, St. John’s University, 8000 Utopia Parkway, Queens, NY 11432, USA b Department of Botany, University of Wisconsin-Madison, 430 Lincoln Dr., Madison, WI 53706, USA article info abstract Article history: We examine the eudicot order Myrtales, a clade with strong Gondwanan representation for most of its Received 9 June 2015 families. Although previous phylogenetic studies greatly improved our understanding of intergeneric Revised 3 September 2015 and interspecific relationships within the order, our understanding of inter-familial relationships still Accepted 4 October 2015 remains unresolved; hence, we also lack a robust time-calibrated chronogram to address hypotheses Available online 14 November 2015 (e.g., biogeography and diversification rates) that have implicit time assumptions. Six loci (rbcL, ndhF, matK, matR, 18S, and 26S) were amplified and sequenced for 102 taxa across Myrtales for phylogenetic Keywords: reconstruction and ten fossil priors were utilized to produce a chronogram in BEAST. Combretaceae is BEAST identified as the sister clade to all remaining families with moderate support, and within the latter clade, BioGeoBEARS BAMM two strongly supported groups are seen: (1) Onagraceae + Lythraceae, and (2) Melastomataceae + the Diversification Crypteroniaceae, Alzateaceae, Penaeaceae clade along with Myrtaceae + Vochysiaceae. Divergence time Gondwana estimates suggest Myrtales diverged from Geraniales 124 Mya during the Aptian of the Early Phylogenetics Cretaceous. -
4. Melastomataceae De La Región Amazónica Colombiana
MELASTOMATACEAE DE LA REGIÓN AMAZÓNICA COLOMBIANA: CATÁLOGO Y ALGUNOS ASPECTOS DE REPRESENTATIVIDAD DE LAS COLECCIONES Humberto Mendoza-Cifuentes1, Dairon Cárdenas1,2 RESUMEN ABSTRACT La Amazonia colombiana, considerada la jurisdic- The Colombian Amazon region, considered as the ción del Instituto SINCHI, es una de las regiones area of jurisdiction of SINCHI Institute, is one the con mayor diversidad de Melastomataceae de Co- most diverse regions for Melastomataceae in Co- lombia. Se presenta el catálogo de especies de Me- lombia. A regional species catalogue of the Melas- lastomataceae para esta región con base en coleccio- tomataceae family is introduced here. It is based nes depositadas en los herbarios COAH y FMB, la on the COAH and FMB herbaria collections, the base de datos del Herbario Nacional Colombiano database of the National Herbarium of Colombia COL y el tratamiento de la familia para el Catálogo (COL), and the recently published treatment of de las Plantas de Colombia recientemente publica- Melastomataceae for the Catalogue of the Plants do. Se documentan 458 especies pertenecientes a of Colombia. The list includes 458 species from 45 géneros, 17 de ellas endémicas al área de estu- 45 genera, 17 of them endemic to the study area. dio. Se presentan datos de la riqueza de especies por Data regarding species richness by subregion (An- subregiones (Andes, Piedemonte Amazónico, Pla- des, Amazon Piedmont, Amazon Plain and Guya- nicie Amazónica y Escudo Guayanés) y se estable- na Shield) are presented, and the species with the cen las especies con mayor número de colecciones highest number of herbarium collections and an de herbario como una estimación de su abundancia.