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Taxonomic Evaluation of Eleven Species of Microcyclops Claus
A peer-reviewed open-access journal ZooKeys 603: 33–69Taxonomic (2016) evaluation of eleven species of Microcyclops Claus, 1893... 33 doi: 10.3897/zookeys.603.7480 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research Taxonomic evaluation of eleven species of Microcyclops Claus, 1893 (Copepoda, Cyclopoida) and description of Microcyclops inarmatus sp. n. from America Martha Angélica Gutiérrez-Aguirre1, Adrián Cervantes-Martínez1 1 Universidad de Quintana Roo (UQROO), Unidad Cozumel, Av. Andrés Quintana Roo s/n, 77600, Cozumel, Quintana Roo México Corresponding author: Martha Angélica Gutiérrez-Aguirre ([email protected]) Academic editor: D. Defaye | Received 10 December 2015 | Accepted 2 June 2016 | Published 6 July 2016 http://zoobank.org/E0086EEB-7B77-4F71-B6BE-E8637207AF21 Citation: Gutiérrez-Aguirre MA, Cervantes-Martínez A (2016) Taxonomic evaluation of eleven species of Microcyclops Claus, 1893 (Copepoda, Cyclopoida) and description of Microcyclops inarmatus sp. n. from America. ZooKeys 603: 33–69. doi: 10.3897/zookeys.603.7480 Abstract Description and meristic analysis of eleven species of Microcyclops recorded in America were performed based on the examination of type specimens and fresh material. Microscopic analysis of oral appendages, such as the shape and armature of the distal coxal endite of the maxilla, the ornamentation on the caudal surface of the antenna, and the intercoxal sclerites and armament of the inner basis of all swimming ap- pendages, were characteristics that allowed the differentiation between species. Among these species, our study confirmed the synonymy of M. diversus Kiefer, 1935 with M. ceibaensis (Marsh, 1919). The results of our observations showed that M. alius (Kiefer, 1935) is a junior synonym of M. -
Anchialine Cave Biology in the Era of Speleogenomics Jorge L
International Journal of Speleology 45 (2) 149-170 Tampa, FL (USA) May 2016 Available online at scholarcommons.usf.edu/ijs International Journal of Speleology Off icial Journal of Union Internationale de Spéléologie Life in the Underworld: Anchialine cave biology in the era of speleogenomics Jorge L. Pérez-Moreno1*, Thomas M. Iliffe2, and Heather D. Bracken-Grissom1 1Department of Biological Sciences, Florida International University, Biscayne Bay Campus, North Miami FL 33181, USA 2Department of Marine Biology, Texas A&M University at Galveston, Galveston, TX 77553, USA Abstract: Anchialine caves contain haline bodies of water with underground connections to the ocean and limited exposure to open air. Despite being found on islands and peninsular coastlines around the world, the isolation of anchialine systems has facilitated the evolution of high levels of endemism among their inhabitants. The unique characteristics of anchialine caves and of their predominantly crustacean biodiversity nominate them as particularly interesting study subjects for evolutionary biology. However, there is presently a distinct scarcity of modern molecular methods being employed in the study of anchialine cave ecosystems. The use of current and emerging molecular techniques, e.g., next-generation sequencing (NGS), bestows an exceptional opportunity to answer a variety of long-standing questions pertaining to the realms of speciation, biogeography, population genetics, and evolution, as well as the emergence of extraordinary morphological and physiological adaptations to these unique environments. The integration of NGS methodologies with traditional taxonomic and ecological methods will help elucidate the unique characteristics and evolutionary history of anchialine cave fauna, and thus the significance of their conservation in face of current and future anthropogenic threats. -
A Study on Aquatic Biodiversity in the Lake Victoria Basin
A Study on Aquatic Biodiversity in the Lake Victoria Basin EAST AFRICAN COMMUNITY LAKE VICTORIA BASIN COMMISSION A Study on Aquatic Biodiversity in the Lake Victoria Basin © Lake Victoria Basin Commission (LVBC) Lake Victoria Basin Commission P.O. Box 1510 Kisumu, Kenya African Centre for Technology Studies (ACTS) P.O. Box 459178-00100 Nairobi, Kenya Printed and bound in Kenya by: Eyedentity Ltd. P.O. Box 20760-00100 Nairobi, Kenya Cataloguing-in-Publication Data A Study on Aquatic Biodiversity in the Lake Victoria Basin, Kenya: ACTS Press, African Centre for Technology Studies, Lake Victoria Basin Commission, 2011 ISBN 9966-41153-4 This report cannot be reproduced in any form for commercial purposes. However, it can be reproduced and/or translated for educational use provided that the Lake Victoria Basin Commission (LVBC) is acknowledged as the original publisher and provided that a copy of the new version is received by Lake Victoria Basin Commission. TABLE OF CONTENTS Copyright i ACRONYMS iii FOREWORD v EXECUTIVE SUMMARY vi 1. BACKGROUND 1 1.1. The Lake Victoria Basin and Its Aquatic Resources 1 1.2. The Lake Victoria Basin Commission 1 1.3. Justification for the Study 2 1.4. Previous efforts to develop Database on Lake Victoria 3 1.5. Global perspective of biodiversity 4 1.6. The Purpose, Objectives and Expected Outputs of the study 5 2. METHODOLOGY FOR ASSESSMENT OF BIODIVERSITY 5 2.1. Introduction 5 2.2. Data collection formats 7 2.3. Data Formats for Socio-Economic Values 10 2.5. Data Formats on Institutions and Experts 11 2.6. -
Guzik IS07040.Qxd
CSIRO PUBLISHING www.publish.csiro.au/journals/is Invertebrate Systematics, 2008, 22, 205–216 Phylogeography of the ancient Parabathynellidae (Crustacea:Bathynellacea) from the Yilgarn region of Western Australia M. T. Guzik A,E, K. M. Abrams A, S. J. B. Cooper A,B, W. F. HumphreysC, J.-L. ChoD and A. D. Austin A AAustralian Centre for Evolutionary Biology and Biodiversity, School of Earth and Environmental Sciences, The University of Adelaide, SA 5005, Australia. BEvolutionary Biology Unit, South Australian Museum, North Terrace, Adelaide, SA 5000, Australia. CWestern Australian Museum, Locked Bag 49, Welshpool DC, WA 6986, Australia. DInternational Drinking Water Center, San 6-2, Yeonchuck-Dong, Daedok-Gu, Taejeon 306-711, Korea. ECorresponding author. Email: [email protected] Abstract. The crustacean order Bathynellacea is a primitive group of subterranean aquatic (stygobitic) invertebrates that typically inhabits freshwater interstitial spaces in alluvia. A striking diversity of species from the bathynellacean family Parabathynellidae have been found in the calcretes of the Yilgarn palaeodrainage system in Western Australia. Taxonomic studies show that most species are restricted in their distribution to a single calcrete, which is consistent with the findings of other phylogeographic studies of stygofauna. In this, the first molecular phylogenetic and phylogeographic study of interspecific relationships among parabathynellids, we aimed to explore the hypothesis that species are short-range endemics and restricted to single calcretes, and to investigate whether there were previously unidentified cryptic species. Analyses of sequence data based on a region of the mitochondrial (mt) DNA cytochrome c oxidase 1 gene showed the existence of divergent mtDNA lineages and species restricted in their distribution to a single calcrete, in support of the broader hypothesis that these calcretes are equivalent to closed island habitats comprising endemic taxa. -
A New Genus and Two New Species of Cave-Dwelling Cyclopoids (Crustacea, Copepoda) from the Epikarst Zone of Thailand and Up-To-D
European Journal of Taxonomy 431: 1–30 ISSN 2118-9773 https://doi.org/10.5852/ejt.2018.431 www.europeanjournaloftaxonomy.eu 2018 · Boonyanusith C. et al. This work is licensed under a Creative Commons Attribution 3.0 License. Research article urn:lsid:zoobank.org:pub:F64382BD-0597-4383-A597-81226EEE77A1 A new genus and two new species of cave-dwelling cyclopoids (Crustacea, Copepoda) from the epikarst zone of Thailand and up-to-date keys to genera and subgenera of the Bryocyclops and Microcyclops groups Chaichat BOONYANUSITH 1, La-orsri SANOAMUANG 2 & Anton BRANCELJ 3,* 1 School of Biology, Faculty of Science and Technology, Nakhon Ratchasima Rajabhat University, 30000, Thailand. 2 Applied Taxonomic Research Centre, Faculty of Science, Khon Kaen University, Khon Kaen, 40002, Thailand. 2 Faculty of Science, Mahasarakham University, Maha Sarakham, 44150, Thailand. 3 National Institute of Biology,Večna pot 111, SI-1000 Ljubljana, Slovenia. 3 School of Environmental Sciences, University of Nova Gorica, Vipavska c. 13, 5000 Nova Gorica, Slovenia. * Corresponding author: [email protected] 1 Email: [email protected] 2 Email: [email protected] 1 urn:lsid:zoobank.org:author:5290B3B5-D3B3-4CF2-AF3B-DCEAEAE7B51D 2 urn:lsid:zoobank.org:author:F0CBCDC7-64C8-476D-83A1-4F7DB7D9E14F 3 urn:lsid:zoobank.org:author:CE8F02CA-A0CC-4769-95D9-DCB1BA25948D Abstract. Two obligate cave-dwelling species of cyclopoid copepods (Copepoda, Cyclopoida) were discovered inside caves in central Thailand. Siamcyclops cavernicolus gen. et sp. nov. was recognised as a member of a new genus. It resembles Bryocyclops jankowskajae Monchenko, 1972 from Uzbekistan (part of the former USSR). It differs from it by (1) lack of pointed triangular prominences on the intercoxal sclerite of the fourth swimming leg, (2) mandibular palp with three setae, (3) spine and setal formulae of swimming legs 3.3.3.2 and 5.5.5.5, respectively, and (4) specifi c shape of spermatophore. -
The 17Th International Colloquium on Amphipoda
Biodiversity Journal, 2017, 8 (2): 391–394 MONOGRAPH The 17th International Colloquium on Amphipoda Sabrina Lo Brutto1,2,*, Eugenia Schimmenti1 & Davide Iaciofano1 1Dept. STEBICEF, Section of Animal Biology, via Archirafi 18, Palermo, University of Palermo, Italy 2Museum of Zoology “Doderlein”, SIMUA, via Archirafi 16, University of Palermo, Italy *Corresponding author, email: [email protected] th th ABSTRACT The 17 International Colloquium on Amphipoda (17 ICA) has been organized by the University of Palermo (Sicily, Italy), and took place in Trapani, 4-7 September 2017. All the contributions have been published in the present monograph and include a wide range of topics. KEY WORDS International Colloquium on Amphipoda; ICA; Amphipoda. Received 30.04.2017; accepted 31.05.2017; printed 30.06.2017 Proceedings of the 17th International Colloquium on Amphipoda (17th ICA), September 4th-7th 2017, Trapani (Italy) The first International Colloquium on Amphi- Poland, Turkey, Norway, Brazil and Canada within poda was held in Verona in 1969, as a simple meet- the Scientific Committee: ing of specialists interested in the Systematics of Sabrina Lo Brutto (Coordinator) - University of Gammarus and Niphargus. Palermo, Italy Now, after 48 years, the Colloquium reached the Elvira De Matthaeis - University La Sapienza, 17th edition, held at the “Polo Territoriale della Italy Provincia di Trapani”, a site of the University of Felicita Scapini - University of Firenze, Italy Palermo, in Italy; and for the second time in Sicily Alberto Ugolini - University of Firenze, Italy (Lo Brutto et al., 2013). Maria Beatrice Scipione - Stazione Zoologica The Organizing and Scientific Committees were Anton Dohrn, Italy composed by people from different countries. -
From an Anchialine Lava Tube in Lanzarote, Canary Islands
Ostracoda (Halocypridina, Cladocopina) from an Anchialine Lava Tube in Lanzarote, Canary Islands LOUIS S. KORN1CKER and THOMAS M. ILIFFE SMITHSONIAN CONTRIBUTIONS TO ZOOLOGY • NUMBER 568 SERIES PUBLICATIONS OF THE SMITHSONIAN INSTITUTION Emphasis upon publication as a means of "diffusing knowledge" was expressed by the first Secretary of the Smithsonian. In his formal plan for the Institution, Joseph Henry outlined a program that included the following statement: "It is proposed to publish a series of reports, giving an account of the new discoveries in science, and of the changes made from year to year in all branches of knowledge." This theme of basic research has been adhered to through the years by thousands of titles issued in series publications under the Smithsonian imprint, commencing with Smithsonian Contributions to Knowledge in 1848 and continuing with the following active series: Smithsonian Contributions to Anthropology Smithsonian Contributions to Astrophysics Smithsonian Contributions to Botany Smithsonian Contributions to the Earth Sciences Smithsonian Contributions to the Marine Sciences Smithsonian Contributions to Paleobiology Smithsonian Contributions to Zoology Smithsonian Folklife Studies Smithsonian Studies in Air and Space Smithsonian Studies in History and Technology In these series, the Institution publishes small papers and full-scale monographs that report the research and collections of its various museums and bureaux or of professional colleagues in the world of science and scholarship. The publications are distributed by mailing lists to libraries, universities, and similar institutions throughout the world. Papers or monographs submitted for series publication are received by the Smithsonian Institution Press, subject to its own review for format and style, only through departments of the various Smithsonian museums or bureaux, where the manuscripts are given substantive review. -
First Insights Into the Subterranean Crustacean Bathynellacea
RESEARCH ARTICLE First Insights into the Subterranean Crustacean Bathynellacea Transcriptome: Transcriptionally Reduced Opsin Repertoire and Evidence of Conserved Homeostasis Regulatory Mechanisms Bo-Mi Kim1, Seunghyun Kang1, Do-Hwan Ahn1, Jin-Hyoung Kim1, Inhye Ahn1,2, Chi- Woo Lee3, Joo-Lae Cho4, Gi-Sik Min3*, Hyun Park1,2* a1111111111 1 Unit of Polar Genomics, Korea Polar Research Institute, Incheon, South Korea, 2 Polar Sciences, a1111111111 University of Science & Technology, Yuseong-gu, Daejeon, South Korea, 3 Department of Biological a1111111111 Sciences, Inha University, Incheon, South Korea, 4 Nakdonggang National Institute of Biological Resources, a1111111111 Sangju, South Korea a1111111111 * [email protected] (HP); [email protected] (GM) Abstract OPEN ACCESS Bathynellacea (Crustacea, Syncarida, Parabathynellidae) are subterranean aquatic crusta- Citation: Kim B-M, Kang S, Ahn D-H, Kim J-H, Ahn I, Lee C-W, et al. (2017) First Insights into the ceans that typically inhabit freshwater interstitial spaces (e.g., groundwater) and are occa- Subterranean Crustacean Bathynellacea sionally found in caves and even hot springs. In this study, we sequenced the whole Transcriptome: Transcriptionally Reduced Opsin transcriptome of Allobathynella bangokensis using RNA-seq. De novo sequence assembly Repertoire and Evidence of Conserved produced 74,866 contigs including 28,934 BLAST hits. Overall, the gene sequences were Homeostasis Regulatory Mechanisms. PLoS ONE 12(1): e0170424. doi:10.1371/journal. most similar to those of the waterflea Daphnia pulex. In the A. bangokensis transcriptome, pone.0170424 no opsin or related sequences were identified, and no contig aligned to the crustacean visual Editor: Peng Xu, Xiamen University, CHINA opsins and non-visual opsins (i.e. -
Contributions in BIOLOGY and GEOLOGY
MILWAUKEE PUBLIC MUSEUM Contributions In BIOLOGY and GEOLOGY Number 51 November 29, 1982 A Compendium of Fossil Marine Families J. John Sepkoski, Jr. MILWAUKEE PUBLIC MUSEUM Contributions in BIOLOGY and GEOLOGY Number 51 November 29, 1982 A COMPENDIUM OF FOSSIL MARINE FAMILIES J. JOHN SEPKOSKI, JR. Department of the Geophysical Sciences University of Chicago REVIEWERS FOR THIS PUBLICATION: Robert Gernant, University of Wisconsin-Milwaukee David M. Raup, Field Museum of Natural History Frederick R. Schram, San Diego Natural History Museum Peter M. Sheehan, Milwaukee Public Museum ISBN 0-893260-081-9 Milwaukee Public Museum Press Published by the Order of the Board of Trustees CONTENTS Abstract ---- ---------- -- - ----------------------- 2 Introduction -- --- -- ------ - - - ------- - ----------- - - - 2 Compendium ----------------------------- -- ------ 6 Protozoa ----- - ------- - - - -- -- - -------- - ------ - 6 Porifera------------- --- ---------------------- 9 Archaeocyatha -- - ------ - ------ - - -- ---------- - - - - 14 Coelenterata -- - -- --- -- - - -- - - - - -- - -- - -- - - -- -- - -- 17 Platyhelminthes - - -- - - - -- - - -- - -- - -- - -- -- --- - - - - - - 24 Rhynchocoela - ---- - - - - ---- --- ---- - - ----------- - 24 Priapulida ------ ---- - - - - -- - - -- - ------ - -- ------ 24 Nematoda - -- - --- --- -- - -- --- - -- --- ---- -- - - -- -- 24 Mollusca ------------- --- --------------- ------ 24 Sipunculida ---------- --- ------------ ---- -- --- - 46 Echiurida ------ - --- - - - - - --- --- - -- --- - -- - - --- -
A Genus-Level Supertree of Adephaga (Coleoptera) Rolf G
ARTICLE IN PRESS Organisms, Diversity & Evolution 7 (2008) 255–269 www.elsevier.de/ode A genus-level supertree of Adephaga (Coleoptera) Rolf G. Beutela,Ã, Ignacio Riberab, Olaf R.P. Bininda-Emondsa aInstitut fu¨r Spezielle Zoologie und Evolutionsbiologie, FSU Jena, Germany bMuseo Nacional de Ciencias Naturales, Madrid, Spain Received 14 October 2005; accepted 17 May 2006 Abstract A supertree for Adephaga was reconstructed based on 43 independent source trees – including cladograms based on Hennigian and numerical cladistic analyses of morphological and molecular data – and on a backbone taxonomy. To overcome problems associated with both the size of the group and the comparative paucity of available information, our analysis was made at the genus level (requiring synonymizing taxa at different levels across the trees) and used Safe Taxonomic Reduction to remove especially poorly known species. The final supertree contained 401 genera, making it the most comprehensive phylogenetic estimate yet published for the group. Interrelationships among the families are well resolved. Gyrinidae constitute the basal sister group, Haliplidae appear as the sister taxon of Geadephaga+ Dytiscoidea, Noteridae are the sister group of the remaining Dytiscoidea, Amphizoidae and Aspidytidae are sister groups, and Hygrobiidae forms a clade with Dytiscidae. Resolution within the species-rich Dytiscidae is generally high, but some relations remain unclear. Trachypachidae are the sister group of Carabidae (including Rhysodidae), in contrast to a proposed sister-group relationship between Trachypachidae and Dytiscoidea. Carabidae are only monophyletic with the inclusion of a non-monophyletic Rhysodidae, but resolution within this megadiverse group is generally low. Non-monophyly of Rhysodidae is extremely unlikely from a morphological point of view, and this group remains the greatest enigma in adephagan systematics. -
Crustaceans Topics in Biodiversity
Topics in Biodiversity The Encyclopedia of Life is an unprecedented effort to gather scientific knowledge about all life on earth- multimedia, information, facts, and more. Learn more at eol.org. Crustaceans Authors: Simone Nunes Brandão, Zoologisches Museum Hamburg Jen Hammock, National Museum of Natural History, Smithsonian Institution Frank Ferrari, National Museum of Natural History, Smithsonian Institution Photo credit: Blue Crab (Callinectes sapidus) by Jeremy Thorpe, Flickr: EOL Images. CC BY-NC-SA Defining the crustacean The Latin root, crustaceus, "having a crust or shell," really doesn’t entirely narrow it down to crustaceans. They belong to the phylum Arthropoda, as do insects, arachnids, and many other groups; all arthropods have hard exoskeletons or shells, segmented bodies, and jointed limbs. Crustaceans are usually distinguishable from the other arthropods in several important ways, chiefly: Biramous appendages. Most crustaceans have appendages or limbs that are split into two, usually segmented, branches. Both branches originate on the same proximal segment. Larvae. Early in development, most crustaceans go through a series of larval stages, the first being the nauplius larva, in which only a few limbs are present, near the front on the body; crustaceans add their more posterior limbs as they grow and develop further. The nauplius larva is unique to Crustacea. Eyes. The early larval stages of crustaceans have a single, simple, median eye composed of three similar, closely opposed parts. This larval eye, or “naupliar eye,” often disappears later in development, but on some crustaceans (e.g., the branchiopod Triops) it is retained even after the adult compound eyes have developed. In all copepod crustaceans, this larval eye is retained throughout their development as the 1 only eye, although the three similar parts may separate and each become associated with their own cuticular lens. -
Southern Gulf, Queensland
Biodiversity Summary for NRM Regions Species List What is the summary for and where does it come from? This list has been produced by the Department of Sustainability, Environment, Water, Population and Communities (SEWPC) for the Natural Resource Management Spatial Information System. The list was produced using the AustralianAustralian Natural Natural Heritage Heritage Assessment Assessment Tool Tool (ANHAT), which analyses data from a range of plant and animal surveys and collections from across Australia to automatically generate a report for each NRM region. Data sources (Appendix 2) include national and state herbaria, museums, state governments, CSIRO, Birds Australia and a range of surveys conducted by or for DEWHA. For each family of plant and animal covered by ANHAT (Appendix 1), this document gives the number of species in the country and how many of them are found in the region. It also identifies species listed as Vulnerable, Critically Endangered, Endangered or Conservation Dependent under the EPBC Act. A biodiversity summary for this region is also available. For more information please see: www.environment.gov.au/heritage/anhat/index.html Limitations • ANHAT currently contains information on the distribution of over 30,000 Australian taxa. This includes all mammals, birds, reptiles, frogs and fish, 137 families of vascular plants (over 15,000 species) and a range of invertebrate groups. Groups notnot yet yet covered covered in inANHAT ANHAT are notnot included included in in the the list. list. • The data used come from authoritative sources, but they are not perfect. All species names have been confirmed as valid species names, but it is not possible to confirm all species locations.