Biological Structures As a Source of Habitat Heterogeneity and Biodiversity on the Deep Ocean Margins Lene Buhl-Mortensen1, Ann Vanreusel2, Andrew J
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A Phylogenetic Analysis of the Genus Eunice (Eunicidae, Polychaete, Annelida)
Blackwell Publishing LtdOxford, UKZOJZoological Journal of the Linnean Society0024-4082© 2007 The Linnean Society of London? 2007 1502 413434 Original Article PHYLOGENY OF EUNICEJ. ZANOL ET AL. Zoological Journal of the Linnean Society, 2007, 150, 413–434. With 12 figures A phylogenetic analysis of the genus Eunice (Eunicidae, polychaete, Annelida) JOANA ZANOL1*, KRISTIAN FAUCHALD2 and PAULO C. PAIVA3 1Pós-Graduação em Zoologia, Museu Nacional/UFRJ, Quinta da Boa Vista s/n°, São Cristovão, Rio de Janeiro, RJ 20940–040, Brazil 2Department of Invertebrate Zoology, NMNH, Smithsonian Institution, PO Box 37012, NHB MRC 0163, Washington, DC 20013–7012, USA 3Departamento de Zoologia, Insituto de Biologia, Universidade Federal do Rio de Janeiro, CCS, Bloco A, Sala A0-104, Ilha do Fundão, Rio de Janeiro, RJ 2240–590, Brazil Received April 2006; accepted for publication December 2006 Species of Eunice are distributed worldwide, inhabiting soft and hard marine bottoms. Some of these species play sig- nificant roles in coral reef communities and others are commercially important. Eunice is the largest and most poorly defined genus in Eunicidae. It has traditionally been subdivided in taxonomically informal groups based on the colour and dentition of subacicular hooks, and branchial distribution. The monophyly of Eunice and of its informal subgroups is tested here using cladistic analyses of 24 ingroup species based on morphological data. In the phylo- genetic hypothesis resulting from the present analyses Eunice and its subgroups are paraphyletic; the genus may be divided in at least two monophyletic groups, Eunice s.s. and Leodice, but several species do not fall inside these two groups. -
Chaetal Type Diversity Increases During Evolution of Eunicida (Annelida)
Org Divers Evol (2016) 16:105–119 DOI 10.1007/s13127-015-0257-z ORIGINAL ARTICLE Chaetal type diversity increases during evolution of Eunicida (Annelida) Ekin Tilic1 & Thomas Bartolomaeus1 & Greg W. Rouse2 Received: 21 August 2015 /Accepted: 30 November 2015 /Published online: 15 December 2015 # Gesellschaft für Biologische Systematik 2015 Abstract Annelid chaetae are a superior diagnostic character Keywords Chaetae . Molecular phylogeny . Eunicida . on species and supraspecific levels, because of their structural Systematics variety and taxon specificity. A certain chaetal type, once evolved, must be passed on to descendants, to become char- acteristic for supraspecific taxa. Therefore, one would expect Introduction that chaetal diversity increases within a monophyletic group and that additional chaetae types largely result from transfor- Chaetae in annelids have attracted the interest of scientist for a mation of plesiomorphic chaetae. In order to test these hypoth- very long time, making them one of the most studied, if not the eses and to explain potential losses of diversity, we take up a most studied structures of annelids. This is partly due to the systematic approach in this paper and investigate chaetation in significance of chaetal features when identifying annelids, Eunicida. As a backbone for our analysis, we used a three- since chaetal structure and arrangement are highly constant gene (COI, 16S, 18S) molecular phylogeny of the studied in species and supraspecific taxa. Aside from being a valuable eunicidan species. This phylogeny largely corresponds to pre- source for taxonomists, chaetae have also been the focus of vious assessments of the phylogeny of Eunicida. Presence or many studies in functional ecology (Merz and Edwards 1998; absence of chaetal types was coded for each species included Merz and Woodin 2000; Merz 2015; Pernet 2000; Woodin into the molecular analysis and transformations for these char- and Merz 1987). -
Vulnerable Marine Ecosystems – Processes and Practices in the High Seas Vulnerable Marine Ecosystems Processes and Practices in the High Seas
ISSN 2070-7010 FAO 595 FISHERIES AND AQUACULTURE TECHNICAL PAPER 595 Vulnerable marine ecosystems – Processes and practices in the high seas Vulnerable marine ecosystems Processes and practices in the high seas This publication, Vulnerable Marine Ecosystems: processes and practices in the high seas, provides regional fisheries management bodies, States, and other interested parties with a summary of existing regional measures to protect vulnerable marine ecosystems from significant adverse impacts caused by deep-sea fisheries using bottom contact gears in the high seas. This publication compiles and summarizes information on the processes and practices of the regional fishery management bodies, with mandates to manage deep-sea fisheries in the high seas, to protect vulnerable marine ecosystems. ISBN 978-92-5-109340-5 ISSN 2070-7010 FAO 9 789251 093405 I5952E/2/03.17 Cover photo credits: Photo descriptions clockwise from top-left: Acanthagorgia spp., Paragorgia arborea, Vase sponges (images courtesy of Fisheries and Oceans, Canada); and Callogorgia spp. (image courtesy of Kirsty Kemp, the Zoological Society of London). FAO FISHERIES AND Vulnerable marine ecosystems AQUACULTURE TECHNICAL Processes and practices in the high seas PAPER 595 Edited by Anthony Thompson FAO Consultant Rome, Italy Jessica Sanders Fisheries Officer FAO Fisheries and Aquaculture Department Rome, Italy Merete Tandstad Fisheries Resources Officer FAO Fisheries and Aquaculture Department Rome, Italy Fabio Carocci Fishery Information Assistant FAO Fisheries and Aquaculture Department Rome, Italy and Jessica Fuller FAO Consultant Rome, Italy FOOD AND AGRICULTURE ORGANIZATION OF THE UNITED NATIONS Rome, 2016 The designations employed and the presentation of material in this information product do not imply the expression of any opinion whatsoever on the part of the Food and Agriculture Organization of the United Nations (FAO) concerning the legal or development status of any country, territory, city or area or of its authorities, or concerning the delimitation of its frontiers or boundaries. -
Symbionts and Environmental Factors Related to Deep-Sea Coral Size and Health
Symbionts and environmental factors related to deep-sea coral size and health Erin Malsbury, University of Georgia Mentor: Linda Kuhnz Summer 2018 Keywords: deep-sea coral, epibionts, symbionts, ecology, Sur Ridge, white polyps ABSTRACT We analyzed video footage from a remotely operated vehicle to estimate the size, environmental variation, and epibiont community of three types of deep-sea corals (class Anthozoa) at Sur Ridge off the coast of central California. For all three of the corals, Keratoisis, Isidella tentaculum, and Paragorgia arborea, species type was correlated with the number of epibionts on the coral. Paragorgia arborea had the highest average number of symbionts, followed by Keratoisis. Epibionts were identified to the lowest possible taxonomic level and categorized as predators or commensalists. Around twice as many Keratoisis were found with predators as Isidella tentaculum, while no predators were found on Paragorgia arborea. Corals were also measured from photos and divided into size classes for each type based on natural breaks. The northern sites of the mound supported larger Keratoisis and Isidella tentaculum than the southern portion, but there was no relationship between size and location for Paragorgia arborea. The northern sites of Sur Ridge were also the only place white polyps were found. These polyps were seen mostly on Keratoisis, but were occasionally found on the skeletons of Isidella tentaculum and even Lillipathes, an entirely separate subclass of corals from Keratoisis. Overall, although coral size appears to be impacted by 1 environmental variables and location for Keratoisis and Isidella tentaculum, the presence of symbionts did not appear to correlate with coral size for any of the coral types. -
Cold-Water Coral Reefs
Jl_ JOINTpk MILJ0VERNDEPARTEMENTET— — natiireW M^ iA/i*/r ONEP WCMC COMMITTEE Norwegian Ministry of the Environment TTTTr Cold-water coral reefs Out of sight - no longer out of mind Andre Freiwald. Jan Helge Fossa, Anthony Grehan, Tony KosLow and J. Murray Roberts Z4^Z4 Digitized by tine Internet Arciiive in 2010 witii funding from UNEP-WCIVIC, Cambridge http://www.arcliive.org/details/coldwatercoralre04frei i!i_«ajuiti'j! ii-D) 1.-I fLir: 111 till 1 J|_ JOINT^ MILJ0VERNDEPARTEMENTET UNEP WCMC COMMITTEE Norwegta» Ministry of the Environment T» TT F Cold-water coral reefs Out of sight - no longer out of mind Andre Freiwald, Jan HeLge Fossa, Anthony Grehan, Tony Koslow and J. Murray Roberts a) UNEP WCMCH UNEP World Conservation Supporting organizations Monitoring Centre 219 Huntingdon Road Department of the Environment, Heritage and Local Cambridge CBS DDL Government United Kingdom National Parks and Wildlife Service Tel: +44 101 1223 2773U 7 Ely Place Fax; +W 101 1223 277136 Dublin 2 Email: [email protected] Ireland Website: www.unep-wcmc.org http://www.environ.ie/DOEI/DOEIhome nsf Director: Mark Collins Norwegian Ministry of the Environment Department for Nature Management The UNEP World Conservation Monitoring Centre is the PO Box 8013 biodiversity assessment and policy implementation arm of the Dep. N-0030 Oslo United Nations Environment Programme (UNEPI. the world's Norway foremost intergovernmental environmental organization. UNEP- http://wwwmilio.no WCMC aims to help decision makers recognize the value ol biodiversity to people everywhere, and to apply this knowledge to Defra all that they do. The Centre's challenge is to transform complex Department for Environment. -
Metabarcoding in the Abyss: Uncovering Deep-Sea Biodiversity Through Environmental
Metabarcoding in the abyss : uncovering deep-sea biodiversity through environmental DNA Miriam Isabelle Brandt To cite this version: Miriam Isabelle Brandt. Metabarcoding in the abyss : uncovering deep-sea biodiversity through environmental DNA. Agricultural sciences. Université Montpellier, 2020. English. NNT : 2020MONTG033. tel-03197842 HAL Id: tel-03197842 https://tel.archives-ouvertes.fr/tel-03197842 Submitted on 14 Apr 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. THÈSE POUR OBTENIR LE GRADE DE DOCTEUR DE L’UNIVERSITÉ DE M ONTPELLIER En Sciences de l'Évolution et de la Biodiversité École doctorale GAIA Unité mixte de recherche MARBEC Pourquoi Pas les Abysses ? L’ADN environnemental pour l’étude de la biodiversité des grands fonds marins Metabarcoding in the abyss: uncovering deep - sea biodiversity through environmental DNA Présentée par Miriam Isabelle BRANDT Le 10 juillet 2020 Sous la direction de Sophie ARNAUD-HAOND et Daniela ZEPPILLI Devant le jury composé de Sofie DERYCKE, Senior researcher/Professeur rang A, ILVO, Belgique Rapporteur -
Download Full Article 2.4MB .Pdf File
Memoirs of Museum Victoria 71: 217–236 (2014) Published December 2014 ISSN 1447-2546 (Print) 1447-2554 (On-line) http://museumvictoria.com.au/about/books-and-journals/journals/memoirs-of-museum-victoria/ Original specimens and type localities of early described polychaete species (Annelida) from Norway, with particular attention to species described by O.F. Müller and M. Sars EIVIND OUG1,* (http://zoobank.org/urn:lsid:zoobank.org:author:EF42540F-7A9E-486F-96B7-FCE9F94DC54A), TORKILD BAKKEN2 (http://zoobank.org/urn:lsid:zoobank.org:author:FA79392C-048E-4421-BFF8-71A7D58A54C7) AND JON ANDERS KONGSRUD3 (http://zoobank.org/urn:lsid:zoobank.org:author:4AF3F49E-9406-4387-B282-73FA5982029E) 1 Norwegian Institute for Water Research, Region South, Jon Lilletuns vei 3, NO-4879 Grimstad, Norway ([email protected]) 2 Norwegian University of Science and Technology, University Museum, NO-7491 Trondheim, Norway ([email protected]) 3 University Museum of Bergen, University of Bergen, PO Box 7800, NO-5020 Bergen, Norway ([email protected]) * To whom correspondence and reprint requests should be addressed. E-mail: [email protected] Abstract Oug, E., Bakken, T. and Kongsrud, J.A. 2014. Original specimens and type localities of early described polychaete species (Annelida) from Norway, with particular attention to species described by O.F. Müller and M. Sars. Memoirs of Museum Victoria 71: 217–236. Early descriptions of species from Norwegian waters are reviewed, with a focus on the basic requirements for re- assessing their characteristics, in particular, by clarifying the status of the original material and locating sampling sites. A large number of polychaete species from the North Atlantic were described in the early period of zoological studies in the 18th and 19th centuries. -
Guide to Translocating Coral Fragments for Deep-Sea Restoration
Guide to Translocating Coral Fragments for Deep-sea Restoration June 2020 | sanctuaries.noaa.gov | National Marine Sanctuaries Conservation Science Series ONMS-20-10 U.S. Department of Commerce Wilbur Ross, Secretary National Oceanic and Atmospheric Administration Neil A. Jacobs, Ph.D. Assistant Secretary of Commerce for Environmental Observation and Prediction National Ocean Service Nicole LeBoeuf, Assistant Administrator (Acting) Office of National Marine Sanctuaries John Armor, Director Report Authors: Charles A. Boch1, Andrew DeVogelaere2, Erica J. Burton2, Chad King2, Christopher Lovera1, Kurt Buck1, Joshua Lord3, Linda Kuhnz1, Michelle Kaiser4, Candace Reid-Rose4, and James P. Barry1 1Monterey Bay Aquarium Research Institute, 7700 Sandholdt Road, Moss Landing, CA 95039, USA 2Monterey Bay National Marine Sanctuary, National Ocean Service, National Oceanic and Atmospheric Administration, 99 Pacific Street, Bldg. 455A, Monterey, CA 93940, USA 3Moravian College, Bethlehem, PA, 18018, USA 4Monterey Bay Aquarium, 886 Cannery Row, Suggested Citation: Boch, C.A., A. DeVogelaere, E.J. Burton, C. King, C. Monterey, CA 93940, USA Lovera, K. Buck, J. Lord, L. Kuhnz, M. Kaiser, C. Reid- Rose, and J. P. Barry. Guide to translocating coral fragments for deep-sea restoration. National Marine Sanctuaries Conservation Series ONMS-20-10. U.S. Department of Commerce, National Oceanic and Atmospheric Administration, Office of National Marine Sanctuaries, Silver Spring, MD. 25 pp. Cover Photo: The seven coral species investigated for developing deep-sea coral restoration methods at Sur Ridge, Monterey Bay National Marine Sanctuary. Photos: MBARI About the National Marine Sanctuaries Conservation Series The Office of National Marine Sanctuaries, part of the National Oceanic and Atmospheric Administration, serves as the trustee for a system of underwater parks encompassing more than 600,000 square miles of ocean and Great Lakes waters. -
First Observations of the Cold-Water Coral Lophelia Pertusa in Mid-Atlantic Canyons of the USA
Deep-Sea Research II 104 (2014) 245–251 Contents lists available at ScienceDirect Deep-Sea Research II journal homepage: www.elsevier.com/locate/dsr2 First observations of the cold-water coral Lophelia pertusa in mid-Atlantic canyons of the USA Sandra Brooke a,n, Steve W. Ross b a Florida State University Coastal and Marine Laboratory, 3618 Coastal Highway 98, St. Teresa, FL 32358, USA b University of North Carolina at Wilmington, Center for Marine Science, 5600 Marvin Moss Lane, Wilmington, NC 28409, USA article info abstract Available online 26 June 2013 The structure-forming, cold-water coral Lophelia pertusa is widely distributed throughout the North fi Keywords: Atlantic Ocean and also occurs in the South Atlantic, North Paci c and Indian oceans. This species has fl USA formed extensive reefs, chie y in deep water, along the continental margins of Europe and the United Norfolk Canyon States, particularly off the southeastern U.S. coastline and in the Gulf of Mexico. There were, however, no Baltimore Canyon records of L. pertusa between the continental slope off Cape Lookout, North Carolina (NC) (∼341N, 761W), Submarine canyon and the rocky Lydonia and Oceanographer canyons off Cape Cod, Massachusetts (MA) (∼401N, 681W). Deep water During a research cruise in September 2012, L. pertusa colonies were observed on steep walls in both Coral Baltimore and Norfolk canyons. These colonies were all approximately 2 m or less in diameter, usually New record hemispherical in shape and consisted entirely of live polyps. The colonies were found between 381 m Lophelia pertusa and 434 m with environmental observations of: temperature 6.4–8.6 1C; salinity 35.0–35.6; and dissolved oxygen 2.06–4.41 ml L−1, all of which fall within the range of known L. -
CNIDARIA Corals, Medusae, Hydroids, Myxozoans
FOUR Phylum CNIDARIA corals, medusae, hydroids, myxozoans STEPHEN D. CAIRNS, LISA-ANN GERSHWIN, FRED J. BROOK, PHILIP PUGH, ELLIOT W. Dawson, OscaR OcaÑA V., WILLEM VERvooRT, GARY WILLIAMS, JEANETTE E. Watson, DENNIS M. OPREsko, PETER SCHUCHERT, P. MICHAEL HINE, DENNIS P. GORDON, HAMISH J. CAMPBELL, ANTHONY J. WRIGHT, JUAN A. SÁNCHEZ, DAPHNE G. FAUTIN his ancient phylum of mostly marine organisms is best known for its contribution to geomorphological features, forming thousands of square Tkilometres of coral reefs in warm tropical waters. Their fossil remains contribute to some limestones. Cnidarians are also significant components of the plankton, where large medusae – popularly called jellyfish – and colonial forms like Portuguese man-of-war and stringy siphonophores prey on other organisms including small fish. Some of these species are justly feared by humans for their stings, which in some cases can be fatal. Certainly, most New Zealanders will have encountered cnidarians when rambling along beaches and fossicking in rock pools where sea anemones and diminutive bushy hydroids abound. In New Zealand’s fiords and in deeper water on seamounts, black corals and branching gorgonians can form veritable trees five metres high or more. In contrast, inland inhabitants of continental landmasses who have never, or rarely, seen an ocean or visited a seashore can hardly be impressed with the Cnidaria as a phylum – freshwater cnidarians are relatively few, restricted to tiny hydras, the branching hydroid Cordylophora, and rare medusae. Worldwide, there are about 10,000 described species, with perhaps half as many again undescribed. All cnidarians have nettle cells known as nematocysts (or cnidae – from the Greek, knide, a nettle), extraordinarily complex structures that are effectively invaginated coiled tubes within a cell. -
Host-Microbe Interactions in Octocoral Holobionts - Recent Advances and Perspectives Jeroen A
van de Water et al. Microbiome (2018) 6:64 https://doi.org/10.1186/s40168-018-0431-6 REVIEW Open Access Host-microbe interactions in octocoral holobionts - recent advances and perspectives Jeroen A. J. M. van de Water* , Denis Allemand and Christine Ferrier-Pagès Abstract Octocorals are one of the most ubiquitous benthic organisms in marine ecosystems from the shallow tropics to the Antarctic deep sea, providing habitat for numerous organisms as well as ecosystem services for humans. In contrast to the holobionts of reef-building scleractinian corals, the holobionts of octocorals have received relatively little attention, despite the devastating effects of disease outbreaks on many populations. Recent advances have shown that octocorals possess remarkably stable bacterial communities on geographical and temporal scales as well as under environmental stress. This may be the result of their high capacity to regulate their microbiome through the production of antimicrobial and quorum-sensing interfering compounds. Despite decades of research relating to octocoral-microbe interactions, a synthesis of this expanding field has not been conducted to date. We therefore provide an urgently needed review on our current knowledge about octocoral holobionts. Specifically, we briefly introduce the ecological role of octocorals and the concept of holobiont before providing detailed overviews of (I) the symbiosis between octocorals and the algal symbiont Symbiodinium; (II) the main fungal, viral, and bacterial taxa associated with octocorals; (III) the dominance of the microbial assemblages by a few microbial species, the stability of these associations, and their evolutionary history with the host organism; (IV) octocoral diseases; (V) how octocorals use their immune system to fight pathogens; (VI) microbiome regulation by the octocoral and its associated microbes; and (VII) the discovery of natural products with microbiome regulatory activities. -
Redknot Status 2007
Status of the Red Knot (Calidris canutus rufa) in the Western Hemisphere Prepared for: U.S. Fish and Wildlife Service Ecological Services, Region 5 New Jersey Field Office 927 North Main Street Pleasantville, New Jersey 08232 Prepared by: Lawrence J. Niles, New Jersey Division of Fish and Wildlife, Endangered and Nongame Species Program, Trenton NJ Humphrey P. Sitters, Editor International Wader Study Group Bulletin, UK Amanda D. Dey, New Jersey Division of Fish and Wildlife, Endangered and Nongame Species Program, Trenton, NJ Philip W. Atkinson, British Trust for Ornithology, Thetford, UK Allan J. Baker Royal Ontario Museum, Toronto, Canada Karen A. Bennett, Delaware Division of Fish and Wildlife, Smyrna, DE Kathleen E. Clark, New Jersey Division of Fish and Wildlife, Endangered and Nongame Species Program, Trenton, NJ Nigel A. Clark, British Trust for Ornithology, Thethford, UK Carmen Espoz, Departamento de Ciencias Basicas, Universidad Santo Tomas, Santiago, Chile Patricia M. Gonzalez, Fundacion Inalafquen, San Antonio Oeste, Argentina Brian A. Harrington, Manomet Center for Conservation Sciences, Manomet, MA Daniel E. Hernandez, Richard Stockton University, NJ Kevin S. Kalasz, Delaware Division of Fish and Wildlife, Smyrna, DE Ricardo Matus N., Natura Patagonia, Punta Arenas, Chile Clive D. T. Minton, Victoria Wader Studies Group, Melbourne, Australia R. I. Guy Morrison, Canadian Wildlife Service, National Wildlife Research Center, Ottawa, Canada Mark K. Peck, Royal Ontario Museum, Toronto, Canada Inês L.Serrano, Instituto Brasileiro do Meio Ambiente e dos Recursos Naturais Renováveis (IBAMA), Brazil May 2007 DISCLAIMER In August 2006, the red knot (Calidris canutus rufa) was designated a candidate species for possible addition to the Federal list of endangered and threatened wildlife (refer to: http://endangered.fws.gov/wildlife.html).