Symbionts and Environmental Factors Related to Deep-Sea Coral Size and Health
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National Monitoring Program for Biodiversity and Non-Indigenous Species in Egypt
UNITED NATIONS ENVIRONMENT PROGRAM MEDITERRANEAN ACTION PLAN REGIONAL ACTIVITY CENTRE FOR SPECIALLY PROTECTED AREAS National monitoring program for biodiversity and non-indigenous species in Egypt PROF. MOUSTAFA M. FOUDA April 2017 1 Study required and financed by: Regional Activity Centre for Specially Protected Areas Boulevard du Leader Yasser Arafat BP 337 1080 Tunis Cedex – Tunisie Responsible of the study: Mehdi Aissi, EcApMEDII Programme officer In charge of the study: Prof. Moustafa M. Fouda Mr. Mohamed Said Abdelwarith Mr. Mahmoud Fawzy Kamel Ministry of Environment, Egyptian Environmental Affairs Agency (EEAA) With the participation of: Name, qualification and original institution of all the participants in the study (field mission or participation of national institutions) 2 TABLE OF CONTENTS page Acknowledgements 4 Preamble 5 Chapter 1: Introduction 9 Chapter 2: Institutional and regulatory aspects 40 Chapter 3: Scientific Aspects 49 Chapter 4: Development of monitoring program 59 Chapter 5: Existing Monitoring Program in Egypt 91 1. Monitoring program for habitat mapping 103 2. Marine MAMMALS monitoring program 109 3. Marine Turtles Monitoring Program 115 4. Monitoring Program for Seabirds 118 5. Non-Indigenous Species Monitoring Program 123 Chapter 6: Implementation / Operational Plan 131 Selected References 133 Annexes 143 3 AKNOWLEGEMENTS We would like to thank RAC/ SPA and EU for providing financial and technical assistances to prepare this monitoring programme. The preparation of this programme was the result of several contacts and interviews with many stakeholders from Government, research institutions, NGOs and fishermen. The author would like to express thanks to all for their support. In addition; we would like to acknowledge all participants who attended the workshop and represented the following institutions: 1. -
Vulnerable Marine Ecosystems – Processes and Practices in the High Seas Vulnerable Marine Ecosystems Processes and Practices in the High Seas
ISSN 2070-7010 FAO 595 FISHERIES AND AQUACULTURE TECHNICAL PAPER 595 Vulnerable marine ecosystems – Processes and practices in the high seas Vulnerable marine ecosystems Processes and practices in the high seas This publication, Vulnerable Marine Ecosystems: processes and practices in the high seas, provides regional fisheries management bodies, States, and other interested parties with a summary of existing regional measures to protect vulnerable marine ecosystems from significant adverse impacts caused by deep-sea fisheries using bottom contact gears in the high seas. This publication compiles and summarizes information on the processes and practices of the regional fishery management bodies, with mandates to manage deep-sea fisheries in the high seas, to protect vulnerable marine ecosystems. ISBN 978-92-5-109340-5 ISSN 2070-7010 FAO 9 789251 093405 I5952E/2/03.17 Cover photo credits: Photo descriptions clockwise from top-left: Acanthagorgia spp., Paragorgia arborea, Vase sponges (images courtesy of Fisheries and Oceans, Canada); and Callogorgia spp. (image courtesy of Kirsty Kemp, the Zoological Society of London). FAO FISHERIES AND Vulnerable marine ecosystems AQUACULTURE TECHNICAL Processes and practices in the high seas PAPER 595 Edited by Anthony Thompson FAO Consultant Rome, Italy Jessica Sanders Fisheries Officer FAO Fisheries and Aquaculture Department Rome, Italy Merete Tandstad Fisheries Resources Officer FAO Fisheries and Aquaculture Department Rome, Italy Fabio Carocci Fishery Information Assistant FAO Fisheries and Aquaculture Department Rome, Italy and Jessica Fuller FAO Consultant Rome, Italy FOOD AND AGRICULTURE ORGANIZATION OF THE UNITED NATIONS Rome, 2016 The designations employed and the presentation of material in this information product do not imply the expression of any opinion whatsoever on the part of the Food and Agriculture Organization of the United Nations (FAO) concerning the legal or development status of any country, territory, city or area or of its authorities, or concerning the delimitation of its frontiers or boundaries. -
Biological Structures As a Source of Habitat Heterogeneity and Biodiversity on the Deep Ocean Margins Lene Buhl-Mortensen1, Ann Vanreusel2, Andrew J
Marine Ecology. ISSN 0173-9565 SPECIAL TOPIC Biological structures as a source of habitat heterogeneity and biodiversity on the deep ocean margins Lene Buhl-Mortensen1, Ann Vanreusel2, Andrew J. Gooday3, Lisa A. Levin4, Imants G. Priede5,Pa˚ l Buhl-Mortensen1, Hendrik Gheerardyn2, Nicola J. King5 & Maarten Raes2 1 Institute of Marine Research, Benthic habitat group, Bergen, Norway 2 Ghent University, Marine Biology research group, Belgium 3 National Oceanography Centre Southampton, Southampton, UK 4 Integrative Oceanography Division, Scripps Institution of Oceanography, University of California, La Jolla, CA, USA 5 Oceanlab, University of Aberdeen, Newburgh, Aberdeenshire, UK Keywords Abstract Biodiversity; biotic structures; commensal; continental slope; deep sea; deep-water coral; Biological structures exert a major influence on species diversity at both local and ecosystem engineering; sponge reefs; regional scales on deep continental margins. Some organisms use other species as xenophyophores. substrates for attachment, shelter, feeding or parasitism, but there may also be mutual benefits from the association. Here, we highlight the structural attributes Correspondence and biotic effects of the habitats that corals, sea pens, sponges and xenophyo- Lene Buhl-Mortensen, Institute of Marine phores offer other organisms. The environmental setting of the biological struc- Research, Benthic habitat group, P.O. Box 1870 Nordnes, N-5817 Bergen, Norway tures influences their species composition. The importance of benthic species as E-mail: [email protected] substrates seems to increase with depth as the complexity of the surrounding geological substrate and food supply decline. There are marked differences in the Accepted: 30 December 2009 degree of mutualistic relationships between habitat-forming taxa. This is espe- cially evident for scleractinian corals, which have high numbers of facultative doi:10.1111/j.1439-0485.2010.00359.x associates (commensals) and few obligate associates (mutualists), and gorgonians, with their few commensals and many obligate associates. -
Guide to Translocating Coral Fragments for Deep-Sea Restoration
Guide to Translocating Coral Fragments for Deep-sea Restoration June 2020 | sanctuaries.noaa.gov | National Marine Sanctuaries Conservation Science Series ONMS-20-10 U.S. Department of Commerce Wilbur Ross, Secretary National Oceanic and Atmospheric Administration Neil A. Jacobs, Ph.D. Assistant Secretary of Commerce for Environmental Observation and Prediction National Ocean Service Nicole LeBoeuf, Assistant Administrator (Acting) Office of National Marine Sanctuaries John Armor, Director Report Authors: Charles A. Boch1, Andrew DeVogelaere2, Erica J. Burton2, Chad King2, Christopher Lovera1, Kurt Buck1, Joshua Lord3, Linda Kuhnz1, Michelle Kaiser4, Candace Reid-Rose4, and James P. Barry1 1Monterey Bay Aquarium Research Institute, 7700 Sandholdt Road, Moss Landing, CA 95039, USA 2Monterey Bay National Marine Sanctuary, National Ocean Service, National Oceanic and Atmospheric Administration, 99 Pacific Street, Bldg. 455A, Monterey, CA 93940, USA 3Moravian College, Bethlehem, PA, 18018, USA 4Monterey Bay Aquarium, 886 Cannery Row, Suggested Citation: Boch, C.A., A. DeVogelaere, E.J. Burton, C. King, C. Monterey, CA 93940, USA Lovera, K. Buck, J. Lord, L. Kuhnz, M. Kaiser, C. Reid- Rose, and J. P. Barry. Guide to translocating coral fragments for deep-sea restoration. National Marine Sanctuaries Conservation Series ONMS-20-10. U.S. Department of Commerce, National Oceanic and Atmospheric Administration, Office of National Marine Sanctuaries, Silver Spring, MD. 25 pp. Cover Photo: The seven coral species investigated for developing deep-sea coral restoration methods at Sur Ridge, Monterey Bay National Marine Sanctuary. Photos: MBARI About the National Marine Sanctuaries Conservation Series The Office of National Marine Sanctuaries, part of the National Oceanic and Atmospheric Administration, serves as the trustee for a system of underwater parks encompassing more than 600,000 square miles of ocean and Great Lakes waters. -
First Observations of the Cold-Water Coral Lophelia Pertusa in Mid-Atlantic Canyons of the USA
Deep-Sea Research II 104 (2014) 245–251 Contents lists available at ScienceDirect Deep-Sea Research II journal homepage: www.elsevier.com/locate/dsr2 First observations of the cold-water coral Lophelia pertusa in mid-Atlantic canyons of the USA Sandra Brooke a,n, Steve W. Ross b a Florida State University Coastal and Marine Laboratory, 3618 Coastal Highway 98, St. Teresa, FL 32358, USA b University of North Carolina at Wilmington, Center for Marine Science, 5600 Marvin Moss Lane, Wilmington, NC 28409, USA article info abstract Available online 26 June 2013 The structure-forming, cold-water coral Lophelia pertusa is widely distributed throughout the North fi Keywords: Atlantic Ocean and also occurs in the South Atlantic, North Paci c and Indian oceans. This species has fl USA formed extensive reefs, chie y in deep water, along the continental margins of Europe and the United Norfolk Canyon States, particularly off the southeastern U.S. coastline and in the Gulf of Mexico. There were, however, no Baltimore Canyon records of L. pertusa between the continental slope off Cape Lookout, North Carolina (NC) (∼341N, 761W), Submarine canyon and the rocky Lydonia and Oceanographer canyons off Cape Cod, Massachusetts (MA) (∼401N, 681W). Deep water During a research cruise in September 2012, L. pertusa colonies were observed on steep walls in both Coral Baltimore and Norfolk canyons. These colonies were all approximately 2 m or less in diameter, usually New record hemispherical in shape and consisted entirely of live polyps. The colonies were found between 381 m Lophelia pertusa and 434 m with environmental observations of: temperature 6.4–8.6 1C; salinity 35.0–35.6; and dissolved oxygen 2.06–4.41 ml L−1, all of which fall within the range of known L. -
CNIDARIA Corals, Medusae, Hydroids, Myxozoans
FOUR Phylum CNIDARIA corals, medusae, hydroids, myxozoans STEPHEN D. CAIRNS, LISA-ANN GERSHWIN, FRED J. BROOK, PHILIP PUGH, ELLIOT W. Dawson, OscaR OcaÑA V., WILLEM VERvooRT, GARY WILLIAMS, JEANETTE E. Watson, DENNIS M. OPREsko, PETER SCHUCHERT, P. MICHAEL HINE, DENNIS P. GORDON, HAMISH J. CAMPBELL, ANTHONY J. WRIGHT, JUAN A. SÁNCHEZ, DAPHNE G. FAUTIN his ancient phylum of mostly marine organisms is best known for its contribution to geomorphological features, forming thousands of square Tkilometres of coral reefs in warm tropical waters. Their fossil remains contribute to some limestones. Cnidarians are also significant components of the plankton, where large medusae – popularly called jellyfish – and colonial forms like Portuguese man-of-war and stringy siphonophores prey on other organisms including small fish. Some of these species are justly feared by humans for their stings, which in some cases can be fatal. Certainly, most New Zealanders will have encountered cnidarians when rambling along beaches and fossicking in rock pools where sea anemones and diminutive bushy hydroids abound. In New Zealand’s fiords and in deeper water on seamounts, black corals and branching gorgonians can form veritable trees five metres high or more. In contrast, inland inhabitants of continental landmasses who have never, or rarely, seen an ocean or visited a seashore can hardly be impressed with the Cnidaria as a phylum – freshwater cnidarians are relatively few, restricted to tiny hydras, the branching hydroid Cordylophora, and rare medusae. Worldwide, there are about 10,000 described species, with perhaps half as many again undescribed. All cnidarians have nettle cells known as nematocysts (or cnidae – from the Greek, knide, a nettle), extraordinarily complex structures that are effectively invaginated coiled tubes within a cell. -
16, Marriott Long Wharf, Boston, Ma
2016 MA, USA BOSTON, WHARF, MARRIOTT LONG -16, 11 SEPTEMBER 6th International Symposium on Deep-Sea Corals, Boston, MA, USA, 11-16 September 2016 Greetings to the Participants of the 6th International Symposium on Deep-Sea Corals We are very excited to welcome all of you to this year’s symposium in historic Boston, Massachusetts. While you are in Boston, we hope that you have a chance to take some time to see this wonderful city. There is a lot to offer right nearby, from the New England Aquarium right here on Long Wharf to Faneuil Hall, which is just across the street. A further exploration might take you to the restaurants and wonderful Italian culture of the North End, the gardens and swan boats of Boston Common, the restaurants of Beacon Hill, the shops of Newbury Street, the campus of Harvard University (across the river in Cambridge) and the eclectic square just beyond its walls, or the multitude of art and science museums that the city has to offer. We have a great program lined up for you. We will start off Sunday evening with a welcome celebration at the New England Aquarium. On Monday, the conference will commence with a survey of the multitude of deep-sea coral habitats around the world and cutting edge techniques for finding and studying them. We will conclude the first day with a look at how these diverse and fragile ecosystems are managed. On Monday evening, we will have the first poster session followed by the debut of the latest State“ of the Deep-Sea Coral and Sponge Ecosystems of the U.S.” report. -
Host-Microbe Interactions in Octocoral Holobionts - Recent Advances and Perspectives Jeroen A
van de Water et al. Microbiome (2018) 6:64 https://doi.org/10.1186/s40168-018-0431-6 REVIEW Open Access Host-microbe interactions in octocoral holobionts - recent advances and perspectives Jeroen A. J. M. van de Water* , Denis Allemand and Christine Ferrier-Pagès Abstract Octocorals are one of the most ubiquitous benthic organisms in marine ecosystems from the shallow tropics to the Antarctic deep sea, providing habitat for numerous organisms as well as ecosystem services for humans. In contrast to the holobionts of reef-building scleractinian corals, the holobionts of octocorals have received relatively little attention, despite the devastating effects of disease outbreaks on many populations. Recent advances have shown that octocorals possess remarkably stable bacterial communities on geographical and temporal scales as well as under environmental stress. This may be the result of their high capacity to regulate their microbiome through the production of antimicrobial and quorum-sensing interfering compounds. Despite decades of research relating to octocoral-microbe interactions, a synthesis of this expanding field has not been conducted to date. We therefore provide an urgently needed review on our current knowledge about octocoral holobionts. Specifically, we briefly introduce the ecological role of octocorals and the concept of holobiont before providing detailed overviews of (I) the symbiosis between octocorals and the algal symbiont Symbiodinium; (II) the main fungal, viral, and bacterial taxa associated with octocorals; (III) the dominance of the microbial assemblages by a few microbial species, the stability of these associations, and their evolutionary history with the host organism; (IV) octocoral diseases; (V) how octocorals use their immune system to fight pathogens; (VI) microbiome regulation by the octocoral and its associated microbes; and (VII) the discovery of natural products with microbiome regulatory activities. -
An Assessment of the Distribution of Deep-Sea Corals in Atlantic Canada by Using Both Scientific and Local Forms of Knowledge
An assessment of the distribution of deep-sea corals in Atlantic Canada by using both scientific and local forms of knowledge Susan E. Gass*, J.H. Martin Willison School for Resource and Environmental Studies, Dalhousie University, Halifax, Nova Scotia, B3H 3J5, Canada *Current address: Scottish Association for Marine Science, Dunstaffnage Marine Laboratory, Oban, Argyll, PA37 1QA, UK ([email protected]) Abstract. More than 27 species of deep-sea corals have been identified off Atlantic Canada but their distributions are largely unknown. Bottom trawling is recognized as a threat to deep-sea corals in Atlantic Canada but the degree of damage has not been quantified. It is difficult to assess the level of conservation required for these organisms without basic information about their distribution. This study attempts to improve our knowledge of the distribution of deep-sea corals in Atlantic Canada. The study uses three sources of data to map the distribution of deep-sea corals in Atlantic Canada including the Canadian Department of Fisheries and Oceans (DFO) groundfish trawl surveys from 1999-2001, DFO fisheries observer records from 2000 and 2001, and local ecological knowledge of fishermen in northern Nova Scotia and Newfoundland. The results reveal that deep-sea corals are widely distributed along the edge of the continental shelf from the Gulf of Maine to the Davis Strait. The study confirms the presence of eight species including: Acanella arbuscula, Acanthogorgia armata, Flabellum spp., Keratoisis ornata, Lophelia pertusa, Paragorgia arborea, Paramuricea spp. and Primnoa resedaeformis. Significant findings from the study include: documentation of an antipatharian, an order not previously recorded in Atlantic Canada; documentation of L. -
Deep-Sea Coral Taxa in the U.S. Southeast Region: Depth and Geographic Distribution (V
Deep-Sea Coral Taxa in the U.S. Southeast Region: Depth and Geographic Distribution (v. 2020) by Thomas F. Hourigan1, Stephen D. Cairns2, John K. Reed3, and Steve W. Ross4 1. NOAA Deep Sea Coral Research and Technology Program, Office of Habitat Conservation, Silver Spring, MD 2. National Museum of Natural History, Smithsonian Institution, Washington, DC 3. Cooperative Institute of Ocean Exploration, Research, and Technology, Harbor Branch Oceanographic Institute, Florida Atlantic University, Fort Pierce, FL 4. Center for Marine Science, University of North Carolina, Wilmington This annex to the U.S. Southeast chapter in “The State of Deep-Sea Coral and Sponge Ecosystems in the United States” provides a list of deep-sea coral taxa in the Phylum Cnidaria, Classes Anthozoa and Hydrozoa, known to occur in U.S. waters from Cape Hatteras to the Florida Keys (Figure 1). Deep-sea corals are defined as azooxanthellate, heterotrophic coral species occurring in waters 50 meters deep or more. Details are provided on the vertical and geographic extent of each species (Table 1). This list is an update of the peer-reviewed 2017 list (Hourigan et al. 2017) and includes taxa recognized through 2019, including one newly described species. Taxonomic names are generally those currently accepted in the World Register of Marine Species (WoRMS), and are arranged by order, and alphabetically within order by family, genus, and species. Data sources (references) listed are those principally used to establish geographic and depth distribution. Figure 1. U.S. Southeast region delimiting the geographic boundaries considered in this work. The region extends from Cape Hatteras to the Florida Keys and includes the Jacksonville Lithoherms (JL), Blake Plateau (BP), Oculina Coral Mounds (OC), Miami Terrace (MT), Pourtalès Terrace (PT), Florida Straits (FS), and Agassiz/Tortugas Valleys (AT). -
The State of Knowledge of Deep-Sea Corals in the New Zealand Region Di Tracey1 and Freya Hjorvarsdottir2 (Eds, Comps) © 2019
The state of knowledge of deep-sea corals in the New Zealand region Di Tracey1 and Freya Hjorvarsdottir2 (eds, comps) © 2019. All rights reserved. The copyright for this report, and for the data, maps, figures and other information (hereafter collectively referred to as “data”) contained in it, is held by NIWA is held by NIWA unless otherwise stated. This copyright extends to all forms of copying and any storage of material in any kind of information retrieval system. While NIWA uses all reasonable endeavours to ensure the accuracy of the data, NIWA does not guarantee or make any representation or warranty (express or implied) regarding the accuracy or completeness of the data, the use to which the data may be put or the results to be obtained from the use of the data. Accordingly, NIWA expressly disclaims all legal liability whatsoever arising from, or connected to, the use of, reference to, reliance on or possession of the data or the existence of errors therein. NIWA recommends that users exercise their own skill and care with respect to their use of the data and that they obtain independent professional advice relevant to their particular circumstances. NIWA SCIENCE AND TECHNOLOGY SERIES NUMBER 84 ISSN 1173-0382 Citation for full report: Tracey, D.M. & Hjorvarsdottir, F. (eds, comps) (2019). The State of Knowledge of Deep-Sea Corals in the New Zealand Region. NIWA Science and Technology Series Number 84. 140 p. Recommended citation for individual chapters (e.g., for Chapter 9.: Freeman, D., & Cryer, M. (2019). Current Management Measures and Threats, Chapter 9 In: Tracey, D.M. -
Crustaceans Associated with the Deep-Water Gorgonian Corals Paragorgia Arborea (L., 1758) and Primnoa Resedaeformis (Gunn., 1763) L
JOURNAL OF NATURAL HISTORY, 0000, 00, 1–15 Crustaceans associated with the deep-water gorgonian corals Paragorgia arborea (L., 1758) and Primnoa resedaeformis (Gunn., 1763) L. BUHL-MORTENSEN and P. B. MORTENSEN Department of Fisheries and Oceans, Marine Environmental Sciences Division, Bedford Institute of Oceanography, PO Box 1006, Dartmouth, NS B2Y 4A2, Canada; e-mail: [email protected] (Accepted 4 February 2003) To explore the crustacean fauna associated with deep-water gorgonian corals, suction samples were taken from colonies of Paragorgia arborea and Primnoa resedaeformis using a Remotely Operated Vehicle. Seven colonies of P. arborea and eight of P. resedaeformis were sampled from 330–500 m depth in the Northeast Channel off Nova Scotia. A total of 17 species were identified as be- ing associated with the corals. The P. arborea-fauna was richer than the P. resedaeformis fauna in both abundance and number of species, with 1303 versus 102 individuals and 16 versus seven species, respectively. However, 13 of the species associated with P. arborea were from hydroids attached to the coral. Amphipods dominated the fauna both in abundance and numbers of species and the most common species were Metopa bruzelii, Stenopleustes malmgreni, Proboloides calcarata and Aeginella spinosa. The isopod Munna boecki and the cirripede Ornatoscalpellum stroemii were also quite common. The most strongly associated crustaceans were two parasitic poecilostomatid copepods; these are common also on tropical gorgonians and are most likely obligate associates. The frequently occurring shrimp Pandalus propinquus probably avoids predation by seeking protection among the coral branches. Shrimp counts from video records showed that visual inspection without physically disturbing colonies will generally not reveal the crustaceans hidden in coral colonies.