Protistology Testate Amoebae of Arctic Tundra Landscapes
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Novaya Zemlya Archipelago (Russian Arctic)
This is a repository copy of First records of testate amoebae from the Novaya Zemlya archipelago (Russian Arctic). White Rose Research Online URL for this paper: http://eprints.whiterose.ac.uk/127196/ Version: Accepted Version Article: Mazei, Yuri, Tsyganov, Andrey N, Chernyshov, Viktor et al. (2 more authors) (2018) First records of testate amoebae from the Novaya Zemlya archipelago (Russian Arctic). Polar Biology. ISSN 0722-4060 https://doi.org/10.1007/s00300-018-2273-x Reuse Items deposited in White Rose Research Online are protected by copyright, with all rights reserved unless indicated otherwise. They may be downloaded and/or printed for private study, or other acts as permitted by national copyright laws. The publisher or other rights holders may allow further reproduction and re-use of the full text version. This is indicated by the licence information on the White Rose Research Online record for the item. Takedown If you consider content in White Rose Research Online to be in breach of UK law, please notify us by emailing [email protected] including the URL of the record and the reason for the withdrawal request. [email protected] https://eprints.whiterose.ac.uk/ 1 First records of testate amoebae from the Novaya Zemlya archipelago (Russian Arctic) 2 Yuri A. Mazei1,2, Andrey N. Tsyganov1, Viktor A. Chernyshov1, Alexander A. Ivanovsky2, Richard J. 3 Payne1,3* 4 1. Penza State University, Krasnaya str., 40, Penza 440026, Russia. 5 2. Lomonosov Moscow State University, Leninskiye Gory, 1, Moscow 119991, Russia. 6 3. University of York, Heslington, York YO10 5DD, United Kingdom. -
Testate Amoebae from South Vietnam Waterbodies with the Description of New Species Difflugia Vietnamicasp
Acta Protozool. (2018) 57: 215–229 www.ejournals.eu/Acta-Protozoologica ACTA doi:10.4467/16890027AP.18.016.10092 PROTOZOOLOGICA LSID urn:lsid:zoobank.org:pub:AEE9D12D-06BD-4539-AD97-87343E7FDBA3 Testate Amoebae from South Vietnam Waterbodies with the Description of New Species Difflugia vietnamicasp. nov. Hoan Q. TRANa, Yuri A. MAZEIb, c a Vietnamese-Russian Tropical Center, 63 Nguyen Van Huyen, Nghia Do, Cau Giay, Ha Noi, Vietnam b Department of Hydrobiology, Lomonosov Moscow State University, Moscow, Russia c Department of Zoology and Ecology, Penza State University, Penza, Russia Abstract. Testate amoebae in Vietnam are still poorly investigated. We studied species composition of testate amoebae in 47 waterbodies of South Vietnam provinces including natural lakes, reservoirs, wetlands, rivers, and irrigation channels. A total of 109 species and subspe- cies belonging to 16 genera, 9 families were identified from 191 samples. Thirty-five species and subspecies were observed in Vietnam for the first time. New speciesDifflugia vietnamica sp. nov. is described. The most species-rich genera are Difflugia (46 taxa), Arcella (25) and Centropyxis (14). Centropyxis aculeata was the most common species (observed in 68.1% samples). Centropyxis aerophila sphagniсola, Arcella discoides, Difflugia schurmanni and Lesquereusia modesta were characterised by a frequency of occurrence >20%. Other spe- cies were rarer. The species accumulation curve based on the entire dataset of this work was unsaturated and well fitted by equation S = 19.46N0.33. Species richness per sample in natural lakes and wetlands were significantly higher than that of rivers (p < 0.001). The result of the Spearman rank test shows weak or statistically insignificant relationships between species richness and water temperature, pH, dissolved oxygen, and electrical conductivity. -
Recent Noteworthy Findings of Fungus Gnats from Finland and Northwestern Russia (Diptera: Ditomyiidae, Keroplatidae, Bolitophilidae and Mycetophilidae)
Biodiversity Data Journal 2: e1068 doi: 10.3897/BDJ.2.e1068 Taxonomic paper Recent noteworthy findings of fungus gnats from Finland and northwestern Russia (Diptera: Ditomyiidae, Keroplatidae, Bolitophilidae and Mycetophilidae) Jevgeni Jakovlev†, Jukka Salmela ‡,§, Alexei Polevoi|, Jouni Penttinen ¶, Noora-Annukka Vartija# † Finnish Environment Insitutute, Helsinki, Finland ‡ Metsähallitus (Natural Heritage Services), Rovaniemi, Finland § Zoological Museum, University of Turku, Turku, Finland | Forest Research Institute KarRC RAS, Petrozavodsk, Russia ¶ Metsähallitus (Natural Heritage Services), Jyväskylä, Finland # Toivakka, Myllyntie, Finland Corresponding author: Jukka Salmela ([email protected]) Academic editor: Vladimir Blagoderov Received: 10 Feb 2014 | Accepted: 01 Apr 2014 | Published: 02 Apr 2014 Citation: Jakovlev J, Salmela J, Polevoi A, Penttinen J, Vartija N (2014) Recent noteworthy findings of fungus gnats from Finland and northwestern Russia (Diptera: Ditomyiidae, Keroplatidae, Bolitophilidae and Mycetophilidae). Biodiversity Data Journal 2: e1068. doi: 10.3897/BDJ.2.e1068 Abstract New faunistic data on fungus gnats (Diptera: Sciaroidea excluding Sciaridae) from Finland and NW Russia (Karelia and Murmansk Region) are presented. A total of 64 and 34 species are reported for the first time form Finland and Russian Karelia, respectively. Nine of the species are also new for the European fauna: Mycomya shewelli Väisänen, 1984,M. thula Väisänen, 1984, Acnemia trifida Zaitzev, 1982, Coelosia gracilis Johannsen, 1912, Orfelia krivosheinae Zaitzev, 1994, Mycetophila biformis Maximova, 2002, M. monstera Maximova, 2002, M. uschaica Subbotina & Maximova, 2011 and Trichonta palustris Maximova, 2002. Keywords Sciaroidea, Fennoscandia, faunistics © Jakovlev J et al. This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. -
Transit Passage in the Russian Arctic Straits
International Boundaries Research Unit MARITIME BRIEFING Volume 1 Number 7 Transit Passage in the Russian Arctic Straits William V. Dunlap Maritime Briefing Volume 1 Number 7 ISBN 1-897643-21-7 1996 Transit Passage in the Russian Arctic Straits by William V. Dunlap Edited by Peter Hocknell International Boundaries Research Unit Department of Geography University of Durham South Road Durham DH1 3LE UK Tel: UK + 44 (0) 191 334 1961 Fax: UK +44 (0) 191 334 1962 e-mail: [email protected] www: http://www-ibru.dur.ac.uk Preface The Russian Federation, continuing an initiative begun by the Soviet Union, is attempting to open the Northern Sea Route, the shipping route along the Arctic coast of Siberia from the Norwegian frontier through the Bering Strait, to international commerce. The goal of the effort is eventually to operate the route on a year-round basis, offering it to commercial shippers as an alternative, substantially shorter route from northern Europe to the Pacific Ocean in the hope of raising hard currency in exchange for pilotage, icebreaking, refuelling, and other services. Meanwhile, the international law of the sea has been developing at a rapid pace, creating, among other things, a right of transit passage that allows, subject to specified conditions, the relatively unrestricted passage of all foreign vessels - commercial and military - through straits used for international navigation. In addition, transit passage permits submerged transit by submarines and overflight by aircraft, practices with implications for the national security of states bordering straits. This study summarises the law of the sea as it relates to straits used for international navigation, and then describes 43 significant straits of the Northeast Arctic Passage, identifying the characteristics of each that are relevant to a determination of whether the strait will be subject to the transit-passage regime. -
The Revised Classification of Eukaryotes
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/231610049 The Revised Classification of Eukaryotes Article in Journal of Eukaryotic Microbiology · September 2012 DOI: 10.1111/j.1550-7408.2012.00644.x · Source: PubMed CITATIONS READS 961 2,825 25 authors, including: Sina M Adl Alastair Simpson University of Saskatchewan Dalhousie University 118 PUBLICATIONS 8,522 CITATIONS 264 PUBLICATIONS 10,739 CITATIONS SEE PROFILE SEE PROFILE Christopher E Lane David Bass University of Rhode Island Natural History Museum, London 82 PUBLICATIONS 6,233 CITATIONS 464 PUBLICATIONS 7,765 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Biodiversity and ecology of soil taste amoeba View project Predator control of diversity View project All content following this page was uploaded by Smirnov Alexey on 25 October 2017. The user has requested enhancement of the downloaded file. The Journal of Published by the International Society of Eukaryotic Microbiology Protistologists J. Eukaryot. Microbiol., 59(5), 2012 pp. 429–493 © 2012 The Author(s) Journal of Eukaryotic Microbiology © 2012 International Society of Protistologists DOI: 10.1111/j.1550-7408.2012.00644.x The Revised Classification of Eukaryotes SINA M. ADL,a,b ALASTAIR G. B. SIMPSON,b CHRISTOPHER E. LANE,c JULIUS LUKESˇ,d DAVID BASS,e SAMUEL S. BOWSER,f MATTHEW W. BROWN,g FABIEN BURKI,h MICAH DUNTHORN,i VLADIMIR HAMPL,j AARON HEISS,b MONA HOPPENRATH,k ENRIQUE LARA,l LINE LE GALL,m DENIS H. LYNN,n,1 HILARY MCMANUS,o EDWARD A. D. -
Volume 2, Chapter 2-3 Protozoa: Rhizopod Diversity
Glime, J. M. 2017. Protozoa: Rhizopod Diversity. Chapt. 2-3. In: Glime, J. M. Bryophyte Ecology. Volume 2. Bryological 2-3-1 Interaction.Ebook sponsored by Michigan Technological University and the International Association of Bryologists. Last updated and available at <http://digitalcommons.mtu.edu/bryophyte-ecology2/>. CHAPTER 2-3 PROTOZOA: RHIZOPOD DIVERSITY TABLE OF CONTENTS Rhizopoda (Amoebas) ......................................................................................................................................... 2-3-2 Species Diversity ................................................................................................................................................. 2-3-4 Summary ........................................................................................................................................................... 2-3-14 Acknowledgments ............................................................................................................................................. 2-3-14 Literature Cited ................................................................................................................................................. 2-3-14 2-3-2 Chapter 2-3: Protozoa: Rhizopod Diversity CHAPTER 2-3 PROTOZOA: RHIZOPOD DIVERSITY Figure 1. Arcella vulgaris, a testate amoeba (Rhizopoda) that is dividing. Photo by Yuuji Tsukii, with permission. Rhizopoda (Amoebas) The Rhizopoda are a phylum of protozoa with a name that literally means "root feet" (Figure 1). They include both -
Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes
University of Rhode Island DigitalCommons@URI Biological Sciences Faculty Publications Biological Sciences 9-26-2018 Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes Christopher E. Lane Et Al Follow this and additional works at: https://digitalcommons.uri.edu/bio_facpubs Journal of Eukaryotic Microbiology ISSN 1066-5234 ORIGINAL ARTICLE Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes Sina M. Adla,* , David Bassb,c , Christopher E. Laned, Julius Lukese,f , Conrad L. Schochg, Alexey Smirnovh, Sabine Agathai, Cedric Berneyj , Matthew W. Brownk,l, Fabien Burkim,PacoCardenas n , Ivan Cepi cka o, Lyudmila Chistyakovap, Javier del Campoq, Micah Dunthornr,s , Bente Edvardsent , Yana Eglitu, Laure Guillouv, Vladimır Hamplw, Aaron A. Heissx, Mona Hoppenrathy, Timothy Y. Jamesz, Anna Karn- kowskaaa, Sergey Karpovh,ab, Eunsoo Kimx, Martin Koliskoe, Alexander Kudryavtsevh,ab, Daniel J.G. Lahrac, Enrique Laraad,ae , Line Le Gallaf , Denis H. Lynnag,ah , David G. Mannai,aj, Ramon Massanaq, Edward A.D. Mitchellad,ak , Christine Morrowal, Jong Soo Parkam , Jan W. Pawlowskian, Martha J. Powellao, Daniel J. Richterap, Sonja Rueckertaq, Lora Shadwickar, Satoshi Shimanoas, Frederick W. Spiegelar, Guifre Torruellaat , Noha Youssefau, Vasily Zlatogurskyh,av & Qianqian Zhangaw a Department of Soil Sciences, College of Agriculture and Bioresources, University of Saskatchewan, Saskatoon, S7N 5A8, SK, Canada b Department of Life Sciences, The Natural History Museum, Cromwell Road, London, SW7 5BD, United Kingdom -
Ecologia Balkanica
ECOLOGIA BALKANICA International Scientific Research Journal of Ecology Volume 4, Issue 1 June 2012 UNION OF SCIENTISTS IN BULGARIA – PLOVDIV UNIVERSITY OF PLOVDIV PUBLISHING HOUSE ii International Standard Serial Number Print ISSN 1314-0213; Online ISSN 1313-9940 Aim & Scope „Ecologia Balkanica” is an international scientific journal, in which original research articles in various fields of Ecology are published, including ecology and conservation of microorganisms, plants, aquatic and terrestrial animals, physiological ecology, behavioural ecology, population ecology, population genetics, community ecology, plant-animal interactions, ecosystem ecology, parasitology, animal evolution, ecological monitoring and bioindication, landscape and urban ecology, conservation ecology, as well as new methodical contributions in ecology. Studies conducted on the Balkans are a priority, but studies conducted in Europe or anywhere else in the World is accepted as well. Published by the Union of Scientists in Bulgaria – Plovdiv and the University of Plovdiv Publishing house – twice a year. Language: English. Peer review process All articles included in “Ecologia Balkanica” are peer reviewed. Submitted manuscripts are sent to two or three independent peer reviewers, unless they are either out of scope or below threshold for the journal. These manuscripts will generally be reviewed by experts with the aim of reaching a first decision as soon as possible. The journal uses the double anonymity standard for the peer-review process. Reviewers do not have to sign their reports and they do not know who the author(s) of the submitted manuscript are. We ask all authors to provide the contact details (including e-mail addresses) of at least four potential reviewers of their manuscript. -
Diversity, Phylogeny and Phylogeography of Free-Living Amoebae
School of Doctoral Studies in Biological Sciences University of South Bohemia in České Budějovice Faculty of Science Diversity, phylogeny and phylogeography of free-living amoebae Ph.D. Thesis RNDr. Tomáš Tyml Supervisor: Mgr. Martin Kostka, Ph.D. Department of Parasitology, Faculty of Science, University of South Bohemia in České Budějovice Specialist adviser: Prof. MVDr. Iva Dyková, Dr.Sc. Department of Botany and Zoology, Faculty of Science, Masaryk University České Budějovice 2016 This thesis should be cited as: Tyml, T. 2016. Diversity, phylogeny and phylogeography of free living amoebae. Ph.D. Thesis Series, No. 13. University of South Bohemia, Faculty of Science, School of Doctoral Studies in Biological Sciences, České Budějovice, Czech Republic, 135 pp. Annotation This thesis consists of seven published papers on free-living amoebae (FLA), members of Amoebozoa, Excavata: Heterolobosea, and Cercozoa, and covers three main topics: (i) FLA as potential fish pathogens, (ii) diversity and phylogeography of FLA, and (iii) FLA as hosts of prokaryotic organisms. Diverse methodological approaches were used including culture-dependent techniques for isolation and identification of free-living amoebae, molecular phylogenetics, fluorescent in situ hybridization, and transmission electron microscopy. Declaration [in Czech] Prohlašuji, že svoji disertační práci jsem vypracoval samostatně pouze s použitím pramenů a literatury uvedených v seznamu citované literatury. Prohlašuji, že v souladu s § 47b zákona č. 111/1998 Sb. v platném znění souhlasím se zveřejněním své disertační práce, a to v úpravě vzniklé vypuštěním vyznačených částí archivovaných Přírodovědeckou fakultou elektronickou cestou ve veřejně přístupné části databáze STAG provozované Jihočeskou univerzitou v Českých Budějovicích na jejích internetových stránkách, a to se zachováním mého autorského práva k odevzdanému textu této kvalifikační práce. -
Personal, Societal, and Ecological Values Of
Study of Plant Species Diversity in the West Siberian Arctic Olga Khitun Olga Rebristaya Abstract—The West Siberian Arctic, due to its history and physi- anywhere; the territory is covered by a thick (up to 300 ography, is characterized by a simple biotope (habitat) structure meters) layer of Quaternary deposits, formed by alternat- and low species richness. By analyzing full vegetative species ing clay, clayey, and sandy layers (Sisko 1977). The study inventories in specific localities, comparisons of floras of different area lies within the zone of continuous permafrost, where biotopes (such as partial floras), and identification of the roles of seasonal freeze-thaw processes and cryogenic natural dis- individual species across the landscape, our research revealed turbances (thermokarst, solifluction, streambank erosion, subzonal changes in the structure of plant species diversity. landslides) occur. Though general taxonomic diversity decreases from the southern The climate is continental and rather severe. The absence hypoarctic tundra to the arctic tundra subzone, the number of of weather stations in the study area forced us to use the species in partial floras does not decrease significantly. There was nearest data to characterize climatic conditions (table 1). an increase in ecological amplitudes (mainly of arctic and arctic/ Average July temperatures range from 11 degrees centi- grade in the south to 4 degrees centigrade in the north. alpine species) in the majority of habitats. The ratio of geographi- Average January temperatures range from minus 25 de- cal groups differs greatly between subzones: hypoarctic and boreal grees centigrade in the south to minus 27 degrees centigrade species prevail in the southern subzone; arctic and arctic/alpine in the north; the average low temperature is minus 29 to species replace them in arctic tundra. -
Comprehensive Phylogenetic Reconstruction of Amoebozoa Based on Concatenated Analyses of SSU-Rdna and Actin Genes
Smith ScholarWorks Biological Sciences: Faculty Publications Biological Sciences 8-2-2011 Comprehensive Phylogenetic Reconstruction of Amoebozoa Based on Concatenated Analyses of SSU-rDNA and Actin Genes Daniel J.G. Lahr University of Massachusetts Amherst Jessica Grant Smith College Truc Nguyen Smith College Jian Hua Lin Smith College Laura A. Katz Smith College, [email protected] Follow this and additional works at: https://scholarworks.smith.edu/bio_facpubs Part of the Biology Commons Recommended Citation Lahr, Daniel J.G.; Grant, Jessica; Nguyen, Truc; Lin, Jian Hua; and Katz, Laura A., "Comprehensive Phylogenetic Reconstruction of Amoebozoa Based on Concatenated Analyses of SSU-rDNA and Actin Genes" (2011). Biological Sciences: Faculty Publications, Smith College, Northampton, MA. https://scholarworks.smith.edu/bio_facpubs/121 This Article has been accepted for inclusion in Biological Sciences: Faculty Publications by an authorized administrator of Smith ScholarWorks. For more information, please contact [email protected] Comprehensive Phylogenetic Reconstruction of Amoebozoa Based on Concatenated Analyses of SSU- rDNA and Actin Genes Daniel J. G. Lahr1,2, Jessica Grant2, Truc Nguyen2, Jian Hua Lin2, Laura A. Katz1,2* 1 Graduate Program in Organismic and Evolutionary Biology, University of Massachusetts, Amherst, Massachusetts, United States of America, 2 Department of Biological Sciences, Smith College, Northampton, Massachusetts, United States of America Abstract Evolutionary relationships within Amoebozoa have been the subject -
Protista (PDF)
1 = Astasiopsis distortum (Dujardin,1841) Bütschli,1885 South Scandinavian Marine Protoctista ? Dingensia Patterson & Zölffel,1992, in Patterson & Larsen (™ Heteromita angusta Dujardin,1841) Provisional Check-list compiled at the Tjärnö Marine Biological * Taxon incertae sedis. Very similar to Cryptaulax Skuja Laboratory by: Dinomonas Kent,1880 TJÄRNÖLAB. / Hans G. Hansson - 1991-07 - 1997-04-02 * Taxon incertae sedis. Species found in South Scandinavia, as well as from neighbouring areas, chiefly the British Isles, have been considered, as some of them may show to have a slightly more northern distribution, than what is known today. However, species with a typical Lusitanian distribution, with their northern Diphylleia Massart,1920 distribution limit around France or Southern British Isles, have as a rule been omitted here, albeit a few species with probable norhern limits around * Marine? Incertae sedis. the British Isles are listed here until distribution patterns are better known. The compiler would be very grateful for every correction of presumptive lapses and omittances an initiated reader could make. Diplocalium Grassé & Deflandre,1952 (™ Bicosoeca inopinatum ??,1???) * Marine? Incertae sedis. Denotations: (™) = Genotype @ = Associated to * = General note Diplomita Fromentel,1874 (™ Diplomita insignis Fromentel,1874) P.S. This list is a very unfinished manuscript. Chiefly flagellated organisms have yet been considered. This * Marine? Incertae sedis. provisional PDF-file is so far only published as an Intranet file within TMBL:s domain. Diplonema Griessmann,1913, non Berendt,1845 (Diptera), nec Greene,1857 (Coel.) = Isonema ??,1???, non Meek & Worthen,1865 (Mollusca), nec Maas,1909 (Coel.) PROTOCTISTA = Flagellamonas Skvortzow,19?? = Lackeymonas Skvortzow,19?? = Lowymonas Skvortzow,19?? = Milaneziamonas Skvortzow,19?? = Spira Skvortzow,19?? = Teixeiromonas Skvortzow,19?? = PROTISTA = Kolbeana Skvortzow,19?? * Genus incertae sedis.