'Sitosterolemia—10 Years Observation in Two Sisters'
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Genes in Eyecare Geneseyedoc 3 W.M
Genes in Eyecare geneseyedoc 3 W.M. Lyle and T.D. Williams 15 Mar 04 This information has been gathered from several sources; however, the principal source is V. A. McKusick’s Mendelian Inheritance in Man on CD-ROM. Baltimore, Johns Hopkins University Press, 1998. Other sources include McKusick’s, Mendelian Inheritance in Man. Catalogs of Human Genes and Genetic Disorders. Baltimore. Johns Hopkins University Press 1998 (12th edition). http://www.ncbi.nlm.nih.gov/Omim See also S.P.Daiger, L.S. Sullivan, and B.J.F. Rossiter Ret Net http://www.sph.uth.tmc.edu/Retnet disease.htm/. Also E.I. Traboulsi’s, Genetic Diseases of the Eye, New York, Oxford University Press, 1998. And Genetics in Primary Eyecare and Clinical Medicine by M.R. Seashore and R.S.Wappner, Appleton and Lange 1996. M. Ridley’s book Genome published in 2000 by Perennial provides additional information. Ridley estimates that we have 60,000 to 80,000 genes. See also R.M. Henig’s book The Monk in the Garden: The Lost and Found Genius of Gregor Mendel, published by Houghton Mifflin in 2001 which tells about the Father of Genetics. The 3rd edition of F. H. Roy’s book Ocular Syndromes and Systemic Diseases published by Lippincott Williams & Wilkins in 2002 facilitates differential diagnosis. Additional information is provided in D. Pavan-Langston’s Manual of Ocular Diagnosis and Therapy (5th edition) published by Lippincott Williams & Wilkins in 2002. M.A. Foote wrote Basic Human Genetics for Medical Writers in the AMWA Journal 2002;17:7-17. A compilation such as this might suggest that one gene = one disease. -
Unilateral Multiple Tuberous Xanthomas Mimicking Multiple Lipomatosis in Type Iia Hypercholesterolemia- a Case Report with Review
Jebmh.com Case Report Unilateral Multiple Tuberous Xanthomas Mimicking Multiple Lipomatosis in Type IIa Hypercholesterolemia- A Case Report with Review Madhuri K.1, Yugank Anand2, Vamseedhar Annam3, Prakash C. J.4, Shreya D. Prabhu5, Harshitha K. S.6 1Postgraduate Student, Department of Pathology, Rajarajeswari Medical College and Hospital, Bangalore, Karnataka. 2Postgraduate Student, Department of Pathology, Rajarajeswari Medical College and Hospital, Bangalore, Karnataka. 3Professor, Department of Pathology, Rajarajeswari Medical College and Hospital, Bangalore, Karnataka. 4Professor, Department of Pathology, Rajarajeswari Medical College and Hospital, Bangalore, Karnataka. 5Postgraduate Student, Department of Pathology, Rajarajeswari Medical College and Hospital, Bangalore, Karnataka. 6Postgradute Student, Department of Pathology, Rajarajeswari Medical College and Hospital, Bangalore, Karnataka. INTRODUCTION The term Xanthoma was derived from a Greek word “Xanthos” meaning yellow Corresponding Author: and was generally used to describe lipid deposits in the subcutaneous plane.1 They Dr. Vamseedhar Annam, do not represent a particular disease, but are cutaneous markers for dyslipidaemia Professor, or may even arise without any underlying metabolic defect.2 Tuberous xanthomas Department of Pathology, present as yellow or reddish nodules located mainly over the extensor surface of Rajarajeswari Medical College and the extremities and buttocks.1 They may be confused with lipomas. Early diagnosis Hospital, Bangalore- 560074, Karnataka. and treatment may help to prevent complications such as coronary artery disease, E-mail: [email protected] 3 myocardial infarction and pancreatitis. We here report a case of unilateral multiple tuberous xanthomas in a young lady with elevated Low density lipoprotein levels DOI: 10.18410/jebmh/2020/183 consistent with familial hypercholesterolemia Type IIa. Financial or Other Competing Interests: None. -
WES Gene Package Multiple Congenital Anomalie.Xlsx
Whole Exome Sequencing Gene package Multiple congenital anomalie, version 5, 1‐2‐2018 Technical information DNA was enriched using Agilent SureSelect Clinical Research Exome V2 capture and paired‐end sequenced on the Illumina platform (outsourced). The aim is to obtain 8.1 Giga base pairs per exome with a mapped fraction of 0.99. The average coverage of the exome is ~50x. Duplicate reads are excluded. Data are demultiplexed with bcl2fastq Conversion Software from Illumina. Reads are mapped to the genome using the BWA‐MEM algorithm (reference: http://bio‐bwa.sourceforge.net/). Variant detection is performed by the Genome Analysis Toolkit HaplotypeCaller (reference: http://www.broadinstitute.org/gatk/). The detected variants are filtered and annotated with Cartagenia software and classified with Alamut Visual. It is not excluded that pathogenic mutations are being missed using this technology. At this moment, there is not enough information about the sensitivity of this technique with respect to the detection of deletions and duplications of more than 5 nucleotides and of somatic mosaic mutations (all types of sequence changes). HGNC approved Phenotype description including OMIM phenotype ID(s) OMIM median depth % covered % covered % covered gene symbol gene ID >10x >20x >30x A4GALT [Blood group, P1Pk system, P(2) phenotype], 111400 607922 101 100 100 99 [Blood group, P1Pk system, p phenotype], 111400 NOR polyagglutination syndrome, 111400 AAAS Achalasia‐addisonianism‐alacrimia syndrome, 231550 605378 73 100 100 100 AAGAB Keratoderma, palmoplantar, -
Coexpression of ATP-Binding Cassette Proteins ABCG5 and ABCG8 Permits Their Transport to the Apical Surface
Coexpression of ATP-binding cassette proteins ABCG5 and ABCG8 permits their transport to the apical surface Gregory A. Graf, … , Jonathan C. Cohen, Helen H. Hobbs J Clin Invest. 2002;110(5):659-669. https://doi.org/10.1172/JCI16000. Article Cardiology Mutations in either ATP-binding cassette (ABC) G5 or ABCG8 cause sitosterolemia, an autosomal recessive disorder of sterol trafficking. To determine the site of action of ABCG5 and ABCG8, we expressed recombinant, epitope-tagged mouse ABCG5 and ABCG8 in cultured cells. Both ABCG5 and ABCG8 underwent N-linked glycosylation. When either protein was expressed individually in cells, the N-linked sugars remained sensitive to Endoglycosidase H (Endo H). When ABCG5 and ABCG8 were coexpressed, the attached sugars were Endo H–resistant and neuraminidase-sensitive, indicating that the proteins were transported to the trans-Golgi complex. The mature, glycosylated forms of ABCG5 and ABCG8 coimmunoprecipitated, consistent with heterodimerization of these two proteins. The Endo H–sensitive forms of ABCG5 and ABCG8 were confined to the endoplasmic reticulum (ER), whereas the mature forms were present in non-ER fractions in cultured hepatocytes. Immunoelectron microscopy revealed ABCG5 and ABCG8 on the plasma membrane of these cells. In polarized WIF-B cells, recombinant ABCG5 localized to the apical (canalicular) membrane when coexpressed with ABCG8, but not when expressed alone. To our knowledge this is the first direct demonstration that trafficking of an ABC half-transporter to the cell surface requires the presence of its dimerization partner. Find the latest version: https://jci.me/16000/pdf Coexpression of ATP-binding cassette See the related Commentary beginning on page 605. -
A Case of Xanthoma Disseminatum Accentuating Over the Eyelids
Ann Dermatol Vol. 22, No. 3, 2010 DOI: 10.5021/ad.2010.22.3.353 CASE REPORT A Case of Xanthoma Disseminatum Accentuating over the Eyelids Jun Young Kim, M.D., Hong Dae Jung, M.D., Yoon Seok Choe, M.D., Weon Ju Lee, M.D., Seok-Jong Lee, M.D., Do Won Kim, M.D., Byung Soo Kim, M.D.1 Department of Dermatology, Kyungpook National University School of Medicine, Daegu, 1Department of Dermatology, Medical Research Institute, Pusan National University School of Medicine, Busan, Korea Xanthoma disseminatum (XD) is a rare, benign non-familial -Keywords- mucocutaneous disorder, which is a subset of non- Blinding, Field of vision, Xanthoma disseminatum, Xero- Langerhans cell histiocytosis. It is characterized by muco- phthalmia cutaneous xanthomas in a disseminated form typically involving the eyelids, trunk, face, and proximal extremities and occurs in flexures and folds such as axillae and the groin. INTRODUCTION Mucosal involvement of the respiratory or gastrointestinal tracts may lead to hoarseness or intestinal obstruction from Xanthoma disseminatum (XD) is a rare, benign proli- a mechanical mass effect. This paper outlines the case of a ferative dermatologic disorder of unknown etiology1. It is 47-year-old female with progressive yellow-to-brown con- classified as a subset of cutaneous non-Langerhans cell fluent nodules and plaques of various sizes on her scalp, face, histiocytosis (NLCH). XD typically manifests as hundreds oral mucosa, neck, shoulder, axillary folds, and perianal of discrete papules and nodules, which are red-brown to area. Xanthomas accentuating over the eyelids and yellow in color1. They chiefly involve the face and trunk, eyelashes led to partial obstruction of her visual field and and occur in flexures and folds such as the axillae and interfered with blinking. -
Clinical Utility Gene Card For: Sitosterolaemia
European Journal of Human Genetics (2017) 25, doi:10.1038/ejhg.2016.187 & 2017 Macmillan Publishers Limited, part of Springer Nature. All rights reserved 1018-4813/17 www.nature.com/ejhg CLINICAL UTILITY GENE CARD Clinical utility gene card for: Sitosterolaemia Amanda J Hooper1,2,3, Damon A Bell1,2, Robert A Hegele4 and John R Burnett*,1,2 European Journal of Human Genetics (2017) 25, doi:10.1038/ejhg.2016.187; published online 28 December 2016 1. DISEASE CHARACTERISTICS Japanese and Indian patients with sitosterolaemia (20% of known cases), 1.1 Name of the disease (synonyms) it is mainly owing to ABCG5 mutations.4 On the basis of allele Sitosterolaemia (phytosterolaemia; Mediterranean stomatocytosis/ frequencies of loss-of-function variants (frameshift, nonsense and macrothrombocytopenia). splicing only; not missense) in the ExAC database, sitosterolaemia has a global prevalence of at least 1 in 2.6 million for ABCG5 and 1 in 1.2 OMIM# of the disease 360 000 for ABCG8; the most common loss-of-function variant 210250. appears to be ABCG8 c.1083G4A (p.(Trp361Ter)) (Exome Aggrega- tion Consortium; http://exac.broadinstitute.org/) 1.3 Name of the analysed genes or DNA/chromosome segments ABCG5 ABCG8 , . 1.9 Diagnostic setting 1.4 OMIM# of the gene(s) 605459, 605460. Yes No. A. (Differential) diagnostics ⊠ □ 1.5 Mutational spectrum B. Predictive testing □ ⊠ □ ⊠ The sitosterolaemia genes ABCG5 (NM_022436.2) and ABCG8 C. Risk assessment in relatives □ ⊠ (NM_022437.2) lie ‘head to head’ on chromosome 2.1–3 They each D. Prenatal contain 13 exons and encode a half-transporter (sterolin-1 and sterolin-2, respectively), with the C-terminus only containing 6 of Comment: Use of genetic testing is essentially limited to confirmatory 3 the usual 12 transmembrane domains of the other ABC transporters. -
Comprehensive Test Menu | August 2020
Comprehensive Test Menu | August 2020 Cancer brain tumors Disease/Condition Test Name/Gene(s) TAT Test Code Brain tumors, hereditary BrainTumorNext®*: 29 genes 14-21 days 8847, 8847-R Neurofibromatosis type 2 (NF2) NF2 14-21 days 9024 Schwannomatosis SMARCB1 14-21 days 7180 breast and gynecologic cancer Disease/Condition Test Name/Gene(s) TAT Test Code Ataxia-telangiectasia ATM 14-21 days 9014 Breast cancer, hereditary BRCA1/BRCA2 6-10 days 8838 BRCA Ashkenazi Jewish 3-site mutation panel 6-10 days 5892 BRCAplus®: 8 genes 7-10 days 8836 BRCANext™*: 18 genes 14-21 days 8855, 8855-R BRCANext-Expanded™*: 23 genes 14-21 days 8860, 8860-R CHEK2-related cancer CHEK2 14-21 days 9016 Li-Fraumeni syndrome TP53 14-21 days 2866 Ovarian, breast and uterine cancer, hereditary BRCANext*: 18 genes 14-21 days 8855, 8855-R BRCANext-Expanded*: 23 genes 14-21 days 8860, 8860-R Ovarian cancer, paired tumor/germline TumorNext®-HRD 21-28 days 9811 TumorNext-BRCA 21-28 days 9810 PALB2-associated cancer PALB2 14-21 days 2366 PTEN-related disorders (Cowden syndrome, Proteus PTEN 14-21 days 2106 syndrome, macrocephaly and autism) comprehensive cancer Disease/Condition Test Name/Gene(s) TAT Test Code Breast, ovarian, colorectal, uterine, pancreatic, prostate, CancerNext®*: 36 genes 14-21 days 8824, 8824-R and other cancer CancerNext-Expanded®*: 77 genes 14-21 days 8874, 8874-R CustomNext-Cancer®*: choose up to 91 genes 14-21 days 9510, 9510-R endocrine tumors Disease/Condition Test Name/Gene(s) TAT Test Code Multiple endocrine neoplasia type 1 (MEN1) MEN1 14-21 -
Sitosterolemia: Twenty Years of Discovery of the Function of ABCG5ABCG8
University of Kentucky UKnowledge Pharmaceutical Sciences Faculty Publications Pharmaceutical Sciences 3-5-2021 Sitosterolemia: Twenty Years of Discovery of the Function of ABCG5ABCG8 Kori Williams University of Kentucky, [email protected] Allison Segard University of Kentucky, [email protected] Gregory A. Graf University of Kentucky, [email protected] Right click to open a feedback form in a new tab to let us know how this document benefits ou.y Follow this and additional works at: https://uknowledge.uky.edu/ps_facpub Part of the Medical Molecular Biology Commons, and the Pharmacy and Pharmaceutical Sciences Commons Sitosterolemia: Twenty Years of Discovery of the Function of ABCG5ABCG8 Digital Object Identifier (DOI) https://doi.org/10.3390/ijms22052641 Notes/Citation Information Published in International Journal of Molecular Sciences, v. 22, issue 5, 2641. © 2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). This review is available at UKnowledge: https://uknowledge.uky.edu/ps_facpub/159 International Journal of Molecular Sciences Review Sitosterolemia: Twenty Years of Discovery of the Function of ABCG5 ABCG8 Kori Williams 1, Allison Segard 1 and Gregory A. Graf 1,2,3,* 1 Department of Pharmaceutical Sciences, College of Pharmacy, University of Kentucky, Lexington, KY 40536, USA; [email protected] (K.W.); [email protected] (A.S.) 2 Saha Cardiovascular Research Center, Lexington, KY 40536, USA 3 Barnstable Brown Diabetes and Obesity Center, Lexington, KY 40536, USA * Correspondence: [email protected]; Tel.: +1-859-797-2463 Abstract: Sitosterolemia is a lipid disorder characterized by the accumulation of dietary xenosterols in plasma and tissues caused by mutations in either ABCG5 or ABCG8. -
Unusual Variants of Non-Langerhans Cell Histiocytoses
REVIEWS Unusual variants of non-Langerhans cell histiocytoses Ruggero Caputo, MD,a Angelo Valerio Marzano, MD,a Emanuela Passoni, MD,a and Emilio Berti, MDb Milan, Italy Histiocytic syndromes represent a large, heterogeneous group of diseases resulting from proliferation of histiocytes. In addition to the classic variants, the subset of non-Langerhans cell histiocytoses comprises rare entities that have more recently been described. These last include both forms that affect only the skin or the skin and mucous membranes, and usually show a benign clinical behavior, and forms involving also internal organs, which may follow an aggressive course. The goal of this review is to outline the clinical, histologic, and ultrastructural features and the course, prognosis, and management of these unusual histiocytic syndromes. ( J Am Acad Dermatol 2007;57:1031-45.) istiocytic syndromes represent a large, puzzling group of diseases resulting from Abbreviations used: proliferation of cells called histiocytes.1 BCH: benign cephalic histiocytosis H ECD: Erdheim-Chester disease The term ‘‘histiocyte’’ includes cells of both the GEH: generalized eruptive histiocytosis monocyte-macrophage series and the Langerhans HPMH: hereditary progressive mucinous cell (LC) series, both antigen-processing and anti- histiocytosis 1 IC: indeterminate cell gen-presenting cells deriving from CD34 progeni- ICH: indeterminate cell histiocytosis tor cells in the bone marrow. JXG: juvenile xanthogranuloma In 1987, the Histiocyte Society proposed a classi- LC: Langerhans cell LCH: Langerhans cell histiocytoses fication of histiocytic syndromes based on 3 classes: MR: multicentric reticulohistiocytosis (1) class I, corresponding to LC histiocytoses (LCH); PNH: progressive nodular histiocytosis (2) class II, encompassing the histiocytoses of mon- PX: papular xanthoma onuclear phagocytes other than LC (non-LCH); and SBH: sea-blue histiocyte 2 SBHS: sea-blue histiocytic syndrome (3) class III, comprising the malignant histiocytoses. -
Cholesterol and Saturated Fat Intake Determine the Effect Of
article September 2006 ⅐ Vol. 8 ⅐ No. 9 Cholesterol and saturated fat intake determine the effect of polymorphisms at ABCG5/ABCG8 genes on lipid levels in children Enrique Viturro, PhD1, Manuel de Oya, PhD, MD1, Miguel A. Lasuncio´n, PhD2, Lydia Gorgojo, PhD, MD3, Jose´ M. Martı´n Moreno, PhD, MD3, Mercedes Benavente, PhD1, Beatriz Cano, PhD1, and Carmen Garces, PhD1 Purpose: Analysis of mutations in genes of the cholesterol metabolic pathway has not completely explained the interindividual variability of blood cholesterol concentrations attributed to gene–nutrient interactions. Thus, we analyzed polymorphisms in the ABCG5 and ABCG8 genes, involved in the regulation of intestinal cholesterol absorption, with special interest in a potential interaction with diet to determine lipid levels. Methods: The polymorphisms ABCG5 C1950G (Gln604Glu) and ABCG8 C1895T (Ala640Val) were determined by polymerase chain reaction and restriction analysis in 1227 healthy school children, aged 6 to 8 years. Results: No significant differences were found in blood lipid levels between subjects with different genotypes of the two analyzed polymorphisms. However, important differences appeared when separating subjects by their different lipid intake. The presence of the ABCG8 C1895T and ABCG5 C1950G polymorphisms was associated with different plasma total cholesterol, low-density lipoprotein cholesterol complex, and apolipoprotein B levels only in low-cholesterol consumers (significantly for the C1895T polymorphism), and among children within the lower tertile of saturated fat intake (significantly for the C1950G polymorphism). Conclusion: Polymorphisms at the half-transporter ABCG5 and ABCG8 genes affect blood cholesterol concentrations in prepubertal children by influencing dietary respon- siveness. This highly significant gene–nutrient interaction could explain the great individual differences in the plasma lipid response to cholesterol and fat intake. -
Xanthoma Disseminatum: Case Report and Mini-Review of the Literature
View metadata, citation and similar papers at core.ac.uk brought to you by CORE Acta Dermatovenerol Croat 2014;22(2):150-154 CASE REPORT Xanthoma Disseminatum: Case Report and Mini-Review of the Literature Michael Park1, Barbara Boone2, Steven Devos1 1Clinic: BVBA Dermatoloog Dr. Devos Oostende; 2Clinic: Ghent University Hospital Corresponding author: SUMMARY Xanthoma disseminatum is a non-familial disorder of non-Langerhans cell ori- Michael Park, MD gin or a class II histiocytosis with unknown etiology, with just over 100 cases reported in the literature. Because of the rarity of this disease, there is no established treatment. We Karel Janssenslaan 41 studied clinical manifestations and different treatments of xanthoma disseminatum from 8400 Oostende a series of cases, including our own patient. Belgium We studied 15 articles on treatment of xanthoma disseminatum. Local treatment with [email protected] cryotherapy, radiotherapy, surgery, and carbon dioxide lasers have been attempted with various results. Systemic medication with peroxisome proliferator-activated gamma recep- tors, statins, fenofibrate, chlorodeoxyadenosine, cyclophosphamide, doxycycline, and cy- Received: April 29, 2013 closporine have also been reported, but none have proven particularly successful. Accepted: January 15, 2014 Xanthoma disseminatum is usually benign and is often self-limiting. If the lesions are accessible to surgery, that is likely to give the best results. However, if the lesions are not accessible for surgical removal then carbon dioxide laser treatment may be considered. The choice of oral treatment should be made on the basis of the patient’s condition, since none of them have proven particularly effective. Expectant management is justifiable as long as the lesions are limited to the skin. -
Blueprint Genetics Comprehensive Hematology and Hereditary Cancer
Comprehensive Hematology and Hereditary Cancer Panel Test code: HE1401 Is a 348 gene panel that includes assessment of non-coding variants. Is ideal for patients with a clinical suspicion of hematological disorder with genetic predisposition to malignancies. This panel is designed to detect heritable germline mutations and should not be used for the detection of somatic mutations in tumor tissue. Is not recommended for patients suspected to have anemia due to alpha-thalassemia (HBA1 or HBA2). These genes are highly homologous reducing mutation detection rate due to challenges in variant call and difficult to detect mutation profile (deletions and gene-fusions within the homologous genes tandem in the human genome). Is not recommended for patients with a suspicion of severe Hemophilia A if the common inversions are not excluded by previous testing. An intron 22 inversion of the F8 gene is identified in 43%-45% individuals with severe hemophilia A and intron 1 inversion in 2%-5% (GeneReviews NBK1404; PMID:8275087, 8490618, 29296726, 27292088, 22282501, 11756167). This test does not detect reliably these inversions. Is not recommended for patients suspected to have anemia due to alpha-thalassemia (HBA1 or HBA2). These genes are highly homologous reducing mutation detection rate due to challenges in variant call and difficult to detect mutation profile (deletions and gene-fusions within the homologous genes tandem in the human genome). About Comprehensive Hematology and Hereditary Cancer Inherited hematological diseases are a group of blood disorders with variable clinical presentation. Many of them predispose to malignancies and for example patients with inherited bone marrow failure syndromes (Fanconi anemia) have a high risk of developing cancer, either leukemia or solid tumors.