Vitamin a Aldehyde-Taurine Adduct and the Visual Cycle
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Dominant Retinas: a Novel Pathway for Visual- Pigment Regeneration in Daylight
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Neuron, Vol. 36, 69–80, September 26, 2002, Copyright 2002 by Cell Press Isomerization and Oxidation of Vitamin A in Cone- Dominant Retinas: A Novel Pathway for Visual- Pigment Regeneration in Daylight Nathan L. Mata,1 Roxana A. Radu,1 cis-retinaldehyde through a multistep pathway called Richard S. Clemmons,3 and Gabriel H. Travis1,2,4 the visual cycle (Figure 1B). Most of what is known about 1Jules Stein Eye Institute the visual cycle has come from the study of rod-domi- 2 Department of Biological Chemistry nant species such as cattle and rodents. UCLA School of Medicine Several lines of evidence suggest that rod and cone Los Angeles, California 90095 photopigments regenerate by different mechanisms. In 3 Center for Basic Neuroscience frog retinas separated from the retinal pigment epithe- UT Southwestern Medical Center lium (RPE), cone opsin, but not rhodopsin, regenerates Dallas, Texas 75235 spontaneously (Goldstein and Wolf, 1973; Hood and Hock, 1973). After bleaching, isolated salamander cones, but not rods, recover sensitivity with addition of Summary 11-cis-retinol (Jones et al., 1989). Cultured Mu¨ ller cells isomerize all-trans-retinol to 11-cis-retinol, which they The first step toward light perception is 11-cis to all- secrete into the medium (Das et al., 1992). Mu¨ ller cells, trans photoisomerization of the retinaldehyde chro- in addition to RPE cells, contain cellular retinaldehyde mophore in a rod or cone opsin-pigment molecule. binding protein (CRALBP), which specifically binds 11- Light sensitivity of the opsin pigment is restored cis-retinoids (Bunt-Milam and Saari, 1983; Saari and through a multistep pathway called the visual cycle, Bredberg, 1987). -
Human Cellular Retinaldehyde-Binding Protein Has Secondary Thermal 9-Cis-Retinal Isomerase Activity
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/259313787 Human Cellular Retinaldehyde-Binding Protein Has Secondary Thermal 9-cis-Retinal Isomerase Activity Article in Journal of the American Chemical Society · January 2014 DOI: 10.1021/ja411366w · Source: PubMed CITATIONS READS 6 123 12 authors, including: Christin Bolze Rachel E. Helbling Vifor Pharma 13 PUBLICATIONS 21 CITATIONS 3 PUBLICATIONS 13 CITATIONS SEE PROFILE SEE PROFILE Arwen Pearson Guillaume Pompidor University of Hamburg European Molecular Biology Laboratory 78 PUBLICATIONS 1,083 CITATIONS 37 PUBLICATIONS 286 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Melanopsin View project AdPLA LRAT View project All content following this page was uploaded by Achim Stocker on 10 November 2017. The user has requested enhancement of the downloaded file. Article pubs.acs.org/JACS Human Cellular Retinaldehyde-Binding Protein Has Secondary Thermal 9-cis-Retinal Isomerase Activity † ‡ † § ∥ ⊥ ∇ Christin S. Bolze, , Rachel E. Helbling, Robin L. Owen, Arwen R. Pearson, Guillaume Pompidor, , ⊥ ⊥ ○ † # # Florian Dworkowski, Martin R. Fuchs, , Julien Furrer, Marcin Golczak, Krzysztof Palczewski, † † Michele Cascella,*, and Achim Stocker*, † ‡ Department of Chemistry and Biochemistry, and Graduate School for Cellular and Biomedical Sciences, University of Bern, Freiestrasse 3, 3012 Bern, Switzerland § Diamond Light Source, Harwell Science and Innovation Campus, -
Shedding New Light on the Generation of the Visual Chromophore PERSPECTIVE Krzysztof Palczewskia,B,C,1 and Philip D
PERSPECTIVE Shedding new light on the generation of the visual chromophore PERSPECTIVE Krzysztof Palczewskia,b,c,1 and Philip D. Kiserb,d Edited by Jeremy Nathans, Johns Hopkins University School of Medicine, Baltimore, MD, and approved July 9, 2020 (received for review May 16, 2020) The visual phototransduction cascade begins with a cis–trans photoisomerization of a retinylidene chro- mophore associated with the visual pigments of rod and cone photoreceptors. Visual opsins release their all-trans-retinal chromophore following photoactivation, which necessitates the existence of pathways that produce 11-cis-retinal for continued formation of visual pigments and sustained vision. Proteins in the retinal pigment epithelium (RPE), a cell layer adjacent to the photoreceptor outer segments, form the well- established “dark” regeneration pathway known as the classical visual cycle. This pathway is sufficient to maintain continuous rod function and support cone photoreceptors as well although its throughput has to be augmented by additional mechanism(s) to maintain pigment levels in the face of high rates of photon capture. Recent studies indicate that the classical visual cycle works together with light-dependent pro- cesses in both the RPE and neural retina to ensure adequate 11-cis-retinal production under natural illu- minances that can span ten orders of magnitude. Further elucidation of the interplay between these complementary systems is fundamental to understanding how cone-mediated vision is sustained in vivo. Here, we describe recent -
Retinoid Isomerase Inhibitors Impair but Do Not Block Mammalian Cone Photoreceptor Function
Published Online: 2 March, 2018 | Supp Info: http://doi.org/10.1085/jgp.201711815 Downloaded from jgp.rupress.org on April 2, 2018 RESEARCH ARTICLE Retinoid isomerase inhibitors impair but do not block mammalian cone photoreceptor function Philip D. Kiser1,2, Jianye Zhang2, Aditya Sharma3, Juan M. Angueyra4, Alexander V. Kolesnikov3, Mohsen Badiee5, Gregory P. Tochtrop5, Junzo Kinoshita6, Neal S. Peachey1,6,7, Wei Li4, Vladimir J. Kefalov3, and Krzysztof Palczewski2 Visual function in vertebrates critically depends on the continuous regeneration of visual pigments in rod and cone photoreceptors. RPE65 is a well-established retinoid isomerase in the pigment epithelium that regenerates rhodopsin during the rod visual cycle; however, its contribution to the regeneration of cone pigments remains obscure. In this study, we use potent and selective RPE65 inhibitors in rod- and cone-dominant animal models to discern the role of this enzyme in cone-mediated vision. We confirm that retinylamine and emixustat-family compounds selectively inhibit RPE65 over DES1, the putative retinoid isomerase of the intraretinal visual cycle. In vivo and ex vivo electroretinography experiments in Gnat1−/− mice demonstrate that acute administration of RPE65 inhibitors after a bleach suppresses the late, slow phase of cone dark adaptation without affecting the initial rapid portion, which reflects intraretinal visual cycle function. Acute administration of these compounds does not affect the light sensitivity of cone photoreceptors in mice during extended exposure to background light, but does slow all phases of subsequent dark recovery. We also show that cone function is only partially suppressed in cone-dominant ground squirrels and wild-type mice by multiday administration of an RPE65 inhibitor despite profound blockade of RPE65 activity. -
Key Enzymes of the Retinoid (Visual) Cycle in Vertebrate Retina☆
Biochimica et Biophysica Acta 1821 (2012) 137–151 Contents lists available at ScienceDirect Biochimica et Biophysica Acta journal homepage: www.elsevier.com/locate/bbalip Review Key enzymes of the retinoid (visual) cycle in vertebrate retina☆ Philip D. Kiser a,1, Marcin Golczak a,1, Akiko Maeda a,b,⁎, Krzysztof Palczewski a,⁎⁎ a Department of Pharmacology, Case Western Reserve University, Cleveland, OH, 44106-4965, USA b Department of Ophthalmology and Vision Sciences, Case Western Reserve University, Cleveland, OH, 44106-4965, USA article info abstract Article history: A major goal in vision research over the past few decades has been to understand the molecular details of Received 19 January 2011 retinoid processing within the retinoid (visual) cycle. This includes the consequences of side reactions that Received in revised form 8 March 2011 result from delayed all-trans-retinal clearance and condensation with phospholipids that characterize a Accepted 22 March 2011 variety of serious retinal diseases. Knowledge of the basic retinoid biochemistry involved in these diseases is Available online 5 April 2011 essential for development of effective therapeutics. Photoisomerization of the 11-cis-retinal chromophore of rhodopsin triggers a complex set of metabolic transformations collectively termed phototransduction that Keywords: RPE65 ultimately lead to light perception. Continuity of vision depends on continuous conversion of all-trans-retinal Retinol dehydrogenase back to the 11-cis-retinal isomer. This process takes place in a series of reactions known as the retinoid cycle, Visual cycle which occur in photoreceptor and RPE cells. All-trans-retinal, the initial substrate of this cycle, is a chemically Retinoid cycle reactive aldehyde that can form toxic conjugates with proteins and lipids. -
(10) Patent No.: US 8119385 B2
US008119385B2 (12) United States Patent (10) Patent No.: US 8,119,385 B2 Mathur et al. (45) Date of Patent: Feb. 21, 2012 (54) NUCLEICACIDS AND PROTEINS AND (52) U.S. Cl. ........................................ 435/212:530/350 METHODS FOR MAKING AND USING THEMI (58) Field of Classification Search ........................ None (75) Inventors: Eric J. Mathur, San Diego, CA (US); See application file for complete search history. Cathy Chang, San Diego, CA (US) (56) References Cited (73) Assignee: BP Corporation North America Inc., Houston, TX (US) OTHER PUBLICATIONS c Mount, Bioinformatics, Cold Spring Harbor Press, Cold Spring Har (*) Notice: Subject to any disclaimer, the term of this bor New York, 2001, pp. 382-393.* patent is extended or adjusted under 35 Spencer et al., “Whole-Genome Sequence Variation among Multiple U.S.C. 154(b) by 689 days. Isolates of Pseudomonas aeruginosa” J. Bacteriol. (2003) 185: 1316 1325. (21) Appl. No.: 11/817,403 Database Sequence GenBank Accession No. BZ569932 Dec. 17. 1-1. 2002. (22) PCT Fled: Mar. 3, 2006 Omiecinski et al., “Epoxide Hydrolase-Polymorphism and role in (86). PCT No.: PCT/US2OO6/OOT642 toxicology” Toxicol. Lett. (2000) 1.12: 365-370. S371 (c)(1), * cited by examiner (2), (4) Date: May 7, 2008 Primary Examiner — James Martinell (87) PCT Pub. No.: WO2006/096527 (74) Attorney, Agent, or Firm — Kalim S. Fuzail PCT Pub. Date: Sep. 14, 2006 (57) ABSTRACT (65) Prior Publication Data The invention provides polypeptides, including enzymes, structural proteins and binding proteins, polynucleotides US 201O/OO11456A1 Jan. 14, 2010 encoding these polypeptides, and methods of making and using these polynucleotides and polypeptides. -
Tsin-CV; Updated 6/94
Updated June, 2019 Andrew Tsin CURRICULUM VITAE Andrew Tsin, Ph.D. Professor and Chair Deaprtment of Molecular Science And Senior Associate Dean of Research School of Medicine The University of Texas Rio Grande Valley (UT Health – Rio Grande Valley) CONTACT INFO: Department of Molecular Science, School of Medicine The University of Texas Rio Grande Valley 1210 W. Schunior St., Edinburg, TX 78541 Phone: (956) 665-6599 Email: [email protected] CITIZENSHIP: USA and CANADA EDUCATION/TRAINING: 1973 BS in Biology, Dalhousie University, Halifax, Nova Scotia, Canada 1976 MS in Zoology (Physiology), The University of Alberta, Edmonton, Alberta, Canada 1979 Ph.D. in Zoology (Physiology), The University of Alberta, Edmonton, Alberta, Canada 1979-81 Postdoctoral Fellow, Cullen Eye Institute, Department of Ophthalmology, Program in Neuroscience, Baylor College of Medicine, Texas Medical Center, Houston, Texas CONTINUED EDUCTION: 2014 Healing Health Care Disparities through Education: An Interdisciplinary Faculty Development Program, Harvard Medical School, Boston, Massachusetts. 2016 Effective Validation of Commercialization Strategy through tactical collection and analysis of data from direct interaction with customer- a short course by The Southwest Node of the National Science Foundation Innovation Corps (I-Corps) Program, The IC2 Institute of the University of Texas at Austin. 2017 Organizational Leadership in Academic Medicine: An Executive Development Seminar for Associate Deans and Department Chairs, AAMC (Association of American Medical -
ANNUAL REPORT 2014–2015 Stein Eye Institute ANNUAL REPORT
ANNUAL REPORT 2014–2015 Stein Eye Institute ANNUAL REPORT July 1, 2014–June 30, 2015 Director Bartly J. Mondino, MD Faculty Advisor Debora B. Farber, PhD, DPhhc Managing Editor Tina-Marie Gauthier c/o Stein Eye Institute 100 Stein Plaza, UCLA Los Angeles, California 90095–7000 Email: [email protected] Editors Teresa Closson Susan Ito Rosalie Licht Peter J. López Ellen Pascual Debbie Sato M. Gail Summer Guest Writer Dan Gordon Photography Reed Hutchinson J. Charles Martin Robin Weisz Design Robin Weisz/Graphic Design Printing Colornet Press Send questions, comments, and updates to: [email protected]. To view the Annual Report online, visit: jsei.org/annual_report.htm. For more information about the Institute, see: www.jsei.org. ©2015 by the Regents of the University of California. All rights reserved. On the cover: Signature eyewear worn by philanthropists Edie and Lew Wasserman dominate the lobby of the Edie & Lew Wasserman Building, paying homage to the couple’s infinite vision and long- standing commitment to preventing blindness and restoring eyesight. A Year in Review 1 Stein Eye Institute 2 Transitions 6 Alumni News 6 Honors and Awards 8 Research 11 Education 13 Community Outreach 15 Philanthropy 17 Thank You 19 Jules and Doris Stein 24 Board of Trustees and Executive Committee 26 Faculty 29 Programs 87 Patient Care Services 88 Research and Treatment Centers 90 Clinical Laboratories 95 Training Programs 97 Appendices 101 Volunteer and Consulting Faculty 102 Residents and Fellows 104 Educational Offerings 105 Research Contracts and Grants 107 Clinical Research Studies 116 Publications of the Full-Time Faculty 123 Giving Opportunities 130 Dear Friends, The 2014–2015 academic term stands as a banner year for the Stein Eye Institute. -
PDF Hosted at the Radboud Repository of the Radboud University Nijmegen
PDF hosted at the Radboud Repository of the Radboud University Nijmegen The following full text is a publisher's version. For additional information about this publication click this link. http://hdl.handle.net/2066/30002 Please be advised that this information was generated on 2021-10-03 and may be subject to change. of Sharola Dharmaraj amaurosis analysis and congenital Clinical molecular Leber Clinical and molecular analysis of Leber congenital amaurosis Sharola Dharmaraj Clinical and molecular analysis of Leber congenital amaurosis Sharola Dharmaraj SSharolaharola BBW.inddW.indd 1 229-May-079-May-07 110:45:200:45:20 AAMM Clinical and molecular analysis of Leber congenital amaurosis PhD thesis Radboud University Nijmegen Medical Centre Sharola Dharmaraj ISBN: 978-90-9021-989-9 © 2007 S. Dharmaraj All rights reserved. No part of this publication may be reproduced or transmitted in any form or by any means, electronic or mechanical, by print or otherwise, without permission in writing from the author. Cover image: Fundus in LCA5-associated LCA (K.Klima) Print and layout by: Optima Grafi sche Communicatie, Rotterdam SSharolaharola BBW.inddW.indd 2 229-May-079-May-07 110:45:220:45:22 AAMM Clinical and molecular analysis of Leber congenital amaurosis Een wetenschappelijke proeve op het gebied van de Medische Wetenschappen Proefschrift ter verkrijging van de graad van doctor aan de Radboud Universiteit Nijmegen op gezag van de rector magnifi cus prof. mr. S.C.J.J Kortmann, volgens besluit van het College van Decanen in het openbaar te verdedigen op maandag 2 juli 2007 om 13.30 uur precies door Sharola Dharmaraj geboren op 11 december 1961 te India SSharolaharola BBW.inddW.indd 3 229-May-079-May-07 110:45:220:45:22 AAMM Promotor: Prof. -
Processing and Transport of Retinoids by the Retinal Pigment Epithelium
Eye (1990) 4, 326-332 Processing and Transport of Retinoids by the Retinal Pigment Epithelium DE AN BOK Los Angeles Summary Recent developments regarding our understanding of retinoid processing and trans port during the visual cycle and related events are reviewed. Retinoids are bound and protected by a cohort of retinoid binding proteins, each of whiCh is unique. The production of retinol (Vitamin A) derivatives is accomplished by a group of mem brane-bound enzymes, some of which appear to be coupled in their actions. Historical Perspectives on a series of biochemical reactions involving The photopigments of all organisms studied the coordinated activity of the retinal pigment to date consist of a chromophore derived from epithelium (RPE) and the photoreceptors.3 Vitamin A (Retinol)! covalently bound to a These events begin with the photobleaching protein by a protonated aldimine bond of rhodopsin to form opsin and all-trans·ret· (Schiff's base).2 The chromophore or pros inal, the production of various retinol deriva thetic group is, in all cases, retinaldehyde (ret tives, the regeneration of ll-cis-retinal and inal) the oxidised form of retinol. Retinol and ultimately, the regeneration of the photopig its derivatives are collectively referred to as ment itself. This complex series of interac retinoids and the proteins that covalently bind tions is known as the visual cycle. In retinal are called opsins. Both the retinoids Dowling's original observations, light was and the opsins are hydrophobic molecules, found to cause a cis to trans isomerisation of retinol being a fat-soluble vitamin, and the opsin-bound retinal following which retinal opsins belonging to a class of membrane com dissociated from the protein and was reduced ponents collectively known as intrinsic pro to form all-trans-retinol. -
Protein Short Name
Electronic Supplementary Material (ESI) for Nanoscale. This journal is © The Royal Society of Chemistry 2017 spot id. protein protein prot acc N° Mw unique sequence peptides identified short name full name (uniprot) peptides coverage (truncated) protein quality control & degradation (q) q1a psb3 ac. Proteasome beta 3 subunit Q9R1P1 22966 8 51% DAVSGMGVIVHVIEK - FGIQAQMVTTDFQK - FGPYYTEPVIAGLDPK - IFPMGDR - LNLYELK - LYIGLAGLATDVQTVAQR - NCVAIAADR - QIKPYTLMSMVANLLYEK q1b psb3 bas Proteasome beta 3 subunit Q9R1P1 22966 8 50% DAVSGMGVIVHVIEKDK - FGIQAQMVTTDFQK - FGPYYTEPVIAGLDPK - GKNCVAIAADR - LNLYELK - LYIGLAGLATDVQTVAQR - NCVAIAADR - QIKPYTLMSMVANLLYEKR q2a sae1 ac SUMO-activating enzyme subunit 1 Q9R1T2 38620 2 7% AQNLNPMVDVK - VSQGVEDGPEAK q2b sae1 bas SUMO-activating enzyme subunit 1 Q9R1T2 38620 16 60% AQNLNPMVDVK - DPPHNNFFFFDGMK - EALEVDWSGEK - EEAGGGGGGGISEEEAAQYDR - FDAVCLTCCSR - FFTGDVFGYHGYTFANLGEHEFVEEK - GLTMLDHEQVSPEDPGAQFLIQTGSVGR - GSGIVECLGPQ - KPESFFTK - LDSSETTMVK - NDVFDSLGISPDLLPDDFVR - NRAEASLER - TAPDYFLLQVLLK - VDTEDVEKKPESFFTK - VEKEEAGGGGGGGISEEEAAQYDR - VLFCPVKEALEVDWSGEK q3 psd13 Proteasome regulatory subunit 13 Q9WVJ2 42810 18 57% CAWGQQPDLAANEAQLLR - DLPVSEQQER - DVPAFLQQSQSSGPGQAAVWHR - ETIEDVEEMLNNLPGVTSVHSR - FLGCVDIK - GSIDEVDKR - LEELYTK - LEELYTKK - LELWCTDVK - LNIGDLQATK - LYENFISEFEHR - QLTFEEIAK - QMTDPNVALTFLEK - QWLIDTLYAFNSGAVDR - SMEMLVEHQAQDILT - VHMTWVQPR - VLDLQQIK - YYQTIGNHASYYK q4 brcc3 Lys63-deubiquitinase brcc36 P46737 36151 3 13% FTYTGTEMR - VCLESAVELPK - VEISPEQLSAASTEAER q5 ube2n Ubiquitin -
Table Continues on Reverse Paired Immunoglobulin-Like Type 2 Receptor Beta (PILRB) Q9UKJ0 Sialic Acid-Binding Ig-Like Lectin 7 (SIGLEC7) Q9Y286
Adenosylhomocysteinase (AHCY) P23526 DNA-(apurinic or apyrimidinic site) lyase (APEX1) P27695 Adhesion G protein-coupled receptor E2 (ADGRE2) Q9UHX3 Ectonucleoside triphosphate diphosphohydrolase 5 (ENTPD5) O75356 Adhesion G-protein coupled receptor G2 (ADGRG2) Q8IZP9 Ectonucleotide pyrophosphatase/phosphodiesterase family member 7 Q6UWV6 (ENPP7) Amyloid-like protein 1 (APLP1) P51693 Eosinophil cationic protein (RNASE3) P12724 Angiopoietin-2 (ANGPT2) O15123 Fc receptor-like protein 1 (FCRL1) Q96LA6 Angiopoietin-related protein 1 (ANGPTL1) O95841 Fructose-1,6-bisphosphatase 1 (FBP1) P09467 Angiopoietin-related protein 7 (ANGPTL7) O43827 Galanin peptides (GAL) P22466 Annexin A4 (ANXA4) P09525 Gamma-enolase (ENO2) P09104 Annexin A11 (ANXA11) P50995 Glutaredoxin-1 (GLRX) P35754 Appetite-regulating hormone (GHRL) Q9UBU3 GRB2-related adapter protein 2 (GRAP2) O75791 Arginase-1 (ARG1) P05089 Hepatoma-derived growth factor (HDGF) P51858 Aromatic-L-amino-acid decarboxylase (DDC) P20711 Inactive tyrosine-protein kinase transmembrane receptor ROR1 (ROR1) Q01973 B-cell antigen receptor complex-associated protein beta chain (CD79B) P40259 Insulin-like growth factor-binding protein-like 1 (IGFBPL1) Q8WX77 Cadherin-2 (CDH2) P19022 Integrin beta-7 (ITGB7) P26010 Cadherin-related family member 5 (CDHR5) Q9HBB8 Kallikrein-10 (KLK10) O43240 Calsyntenin-2 (CLSTN2) Q9H4D0 Kynurenine-oxoglutarate transaminase 1 (KYAT1) Q16773 Carbonic anhydrase 13 (CA13) Q8N1Q1 Large proline-rich protein BAG6 (BAG6) P46379 Catechol O-methyltransferase (COMT) P21964 Leucine-rich