Notes on British Species of Byssonectria
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The Phylogeny of Plant and Animal Pathogens in the Ascomycota
Physiological and Molecular Plant Pathology (2001) 59, 165±187 doi:10.1006/pmpp.2001.0355, available online at http://www.idealibrary.com on MINI-REVIEW The phylogeny of plant and animal pathogens in the Ascomycota MARY L. BERBEE* Department of Botany, University of British Columbia, 6270 University Blvd, Vancouver, BC V6T 1Z4, Canada (Accepted for publication August 2001) What makes a fungus pathogenic? In this review, phylogenetic inference is used to speculate on the evolution of plant and animal pathogens in the fungal Phylum Ascomycota. A phylogeny is presented using 297 18S ribosomal DNA sequences from GenBank and it is shown that most known plant pathogens are concentrated in four classes in the Ascomycota. Animal pathogens are also concentrated, but in two ascomycete classes that contain few, if any, plant pathogens. Rather than appearing as a constant character of a class, the ability to cause disease in plants and animals was gained and lost repeatedly. The genes that code for some traits involved in pathogenicity or virulence have been cloned and characterized, and so the evolutionary relationships of a few of the genes for enzymes and toxins known to play roles in diseases were explored. In general, these genes are too narrowly distributed and too recent in origin to explain the broad patterns of origin of pathogens. Co-evolution could potentially be part of an explanation for phylogenetic patterns of pathogenesis. Robust phylogenies not only of the fungi, but also of host plants and animals are becoming available, allowing for critical analysis of the nature of co-evolutionary warfare. Host animals, particularly human hosts have had little obvious eect on fungal evolution and most cases of fungal disease in humans appear to represent an evolutionary dead end for the fungus. -
Alciphila Vulgaris, a New Genus and Species of Deuteromycetes
KARSTENIA 42 (2002) HARMAJA, H.: ALCIPHILA VULGARIS 33 Karstenia 42: 33-38, 2002 Alciphila vulgaris, a new genus and species of Deuteromycetes HARRI HARMAJA HARMAJA, H. 2002: Alciphila vulgaris, a new genus and species of Deuteromycetes. - Karstenia 42: 33-38. Helsinki. ISSN 0453-3402. The new form genus Alciphila Harmaja (Hyphomycetes) is described. It is character ized by (i) a superficial mycelium composed of voluminous hyaline hyphae, (ii) conid ium development terminally in unspecialized hypha! ends, and (iii) large elongated brown aleurioconidia which possess a thick, complex wall with longitudinal ridges and a hyaline perisporium. The type and only species of the new genus is Alciphila vul garis Harmaja which is described as a new species at the same time. Judged from qualitative studies in the field and the herbarium, A. vulgaris occurs in a special ecolog ical niche: on forest litter and mosses which have been impregnated by the urine of European elk (Alces alces L.), accompanied by some species of the Pezizales (Asco mycetes). The species is reported from several localities in Finland and one in Norway. The interesting ecological niche concerned, a spot which has received elk urine, is discussed briefly. Key words: ammonia fungi, Byssonectria, conidia, elk urine, Finland, Hyphomycetes, metapopulation, Peziza , Pezizales, Pseudombrophila Harri Harmaja, Botanical Museum, Finnish Museum of Natural History, P 0. Box 47, FIN-00014 University of Helsinki, Finland www.helsinki.fi/people/harri.harmaja/ Introduction Old fruit bodies of fleshy fungi, animal dung, and in the soil or not), (iii) underground nests of dead bodies of animals are known as the princi mice, voles and other mammalia (with a latrine or pal ecological niches of many specialized species not), (iv) places close to dead bodies ofmarnmalia belonging especially to fungi of different groups, (either buried or not), and even (v) an old wasp insects, in some cases even mosses and algae. -
Soppognyttevekster.No › Agarica-1998-Nr-24-25 T
-f 't),.. ~I:WI~TAD t'J'JfORHHMG l "International Mycological Directory" second edition 1990 av G.S.Hall & D.L.Hawkworth finner vi følgende om Fredrikstad Soppforening: MYCOWGICAL SOCIETY OF FREDRIKSTAD Status: Local Organisalion type: Amateur Society &ope: Specialist Conlact: Roy Kristiansen Addn!SS: Fredrikstad Soppforening, P.O. Box 167, N-1601 Fredrikstad, Norway. lnlen!sts: Edible fungi, macromycetes. Portrail: Frederikstad Soppforening was founded in 1973 and isopen to anyone interested in fungi. Its ai ms are to educate the public about edible and poisonous fungi and to improve knowledge of the regional non edible fungi. There are currently 130 subscribing members, represented by a biennially serving Board, consisting of a President, Vice-President, Treasurer, Secretary and three Members, who meet six to seven times per year. On average there are six membership meetings (usually two in the spring and four in the autumn) mainly devot ed to edible fungi, with lectures from Society members and occasionally from professionals. Five to six field trips are held in the season (including one in May), when an identification service for the general public is offered by authorized members who are trained in a University-based course. New species are deposited in the Herbaria at Oslo and Trondheim Universities. The Society offers to guide professionals and amateurs from other pans of Norway, and from other countries, through the region in search of special biotypes or races. MHtings: Occasional symposia are arranged on specific topics (eg Coninarius and Russula) by Society and outside specialists which attract panicipation from other Scandinavian countries. Publication: Journal: Agarica (ca 200 pages, two issues per year) is mainly dedicated to macrornycetes and accepts anicles written in Nordic languages, English, French or German. -
Hoffmannoscypha, a Novel Genus of Brightly Coloured, Cupulate Pyronemataceae Closely Related to Tricharina and Geopora
Mycol Progress DOI 10.1007/s11557-012-0875-1 ORIGINAL ARTICLE Hoffmannoscypha, a novel genus of brightly coloured, cupulate Pyronemataceae closely related to Tricharina and Geopora Benjamin Stielow & Gunnar Hensel & Dirk Strobelt & Huxley Mae Makonde & Manfred Rohde & Jan Dijksterhuis & Hans-Peter Klenk & Markus Göker Received: 7 July 2012 /Revised: 11 November 2012 /Accepted: 25 November 2012 # German Mycological Society and Springer-Verlag Berlin Heidelberg 2012 Abstract The rare apothecial, cupulate fungus Geopora comprising Phaeangium, Picoa, the majority of the pellita (Pyronemataceae) is characterized by a uniquely Tricharina species, and the remaining Geopora species. bright yellow-orange excipulum. We here re-examine its Based on its phylogenetic position and its unique combina- affiliations by use of morphological, molecular phylogenetic tion of morphological characters, we assign G. pellita to and ultrastructural analyses. G. pellita appears as phyloge- Hoffmannoscypha, gen. nov., as H. pellita, comb. nov. As in netically rather isolated, being the sister group of a clade a previous study, analyses of both large subunit (LSU) and internal transcribed spacer (ITS) ribosomal DNA suggest that the remaining genus Geopora is paraphyletic, with the Electronic supplementary material The online version of this article hypogeous, ptychothecial type species more closely related (doi:10.1007/s11557-012-0875-1) contains supplementary material, to Picoa and Phaeangium than to the greyish-brownish which is available to authorized users. cupulate and apothecial Geopora spp., indicating that the : B. Stielow J. Dijksterhuis latter should be reassigned to the genus Sepultaria. The Centraalbureau voor Schimmelcultures, current study also shows that ITS confirm LSU data regard- Uppsalalaan 8, ing the polyphyly of Tricharina. -
2 Pezizomycotina: Pezizomycetes, Orbiliomycetes
2 Pezizomycotina: Pezizomycetes, Orbiliomycetes 1 DONALD H. PFISTER CONTENTS 5. Discinaceae . 47 6. Glaziellaceae. 47 I. Introduction ................................ 35 7. Helvellaceae . 47 II. Orbiliomycetes: An Overview.............. 37 8. Karstenellaceae. 47 III. Occurrence and Distribution .............. 37 9. Morchellaceae . 47 A. Species Trapping Nematodes 10. Pezizaceae . 48 and Other Invertebrates................. 38 11. Pyronemataceae. 48 B. Saprobic Species . ................. 38 12. Rhizinaceae . 49 IV. Morphological Features .................... 38 13. Sarcoscyphaceae . 49 A. Ascomata . ........................... 38 14. Sarcosomataceae. 49 B. Asci. ..................................... 39 15. Tuberaceae . 49 C. Ascospores . ........................... 39 XIII. Growth in Culture .......................... 50 D. Paraphyses. ........................... 39 XIV. Conclusion .................................. 50 E. Septal Structures . ................. 40 References. ............................. 50 F. Nuclear Division . ................. 40 G. Anamorphic States . ................. 40 V. Reproduction ............................... 41 VI. History of Classification and Current I. Introduction Hypotheses.................................. 41 VII. Growth in Culture .......................... 41 VIII. Pezizomycetes: An Overview............... 41 Members of two classes, Orbiliomycetes and IX. Occurrence and Distribution .............. 41 Pezizomycetes, of Pezizomycotina are consis- A. Parasitic Species . ................. 42 tently shown -
Teadusmõte Eestis (Vi)
TEADUSMÕTE EESTIS (VI) ELU- JA MAATEADUSED TALLINN 2011 TEADUSMÕTE EESTIS (VI) ELU- JA MAATEADUSED Erast Parmasto, Agu Laisk, Dimitri Kaljo (vastutavad toimetajad) Helle-Liis Help, Siiri Jakobson, Ülle Rebo, Galina Varlamova ISSN 1736-5015 ISBN 978-9949-21-823-3 (pdf) © EESTI TEADUSTE AKADEEMIA Facta non solum verba SISUKORD ELUTEADUSED Saateks Erast Parmasto . 6 Looduskaitsebioloogia – aimu ja otsuse vahel Asko Lõhmus . 9 Elurikkuse informaatika Urmas Kõljalg, Kessy Abarenkov . 17 Taimekoosluste mitmekesisus – mustrid ja mehhanismid Martin Zobel, Meelis Pärtel . 27 Mükoriisaseente elurikkuse uuringud Eestis Leho Tedersoo, Triin Naadel, Maarja Öpik, Ivika Ostonen . .. 35 Seenesüstemaatika aastatuhandete vahetuse eel ja järel Kadri Põldmaa . 43 Evolutsiooniline putukaökoloogia fülogeneetiliseks lähenemiseks valmis Toomas Tammaru . 49 Usun, et mõistan Agu Laisk . 57 Klorofüll – füüsikat ja bioloogiat ühendav molekul Arvi Freiberg . 73 Koolipoisist ökofüsioloogiks Ülo Niinemets . 85 4 MAATEADUSED Saateks Dimitri Kaljo . 94 Mikropaleontoloogia ja biostratigraafia rollist ning ühest tähendusrikkast leiust Eestis Tõnu Meidla, Jaak Nõlvak, Oive Tinn . 97 Siluri selgroogsed – ühe rühma arengulugu Tiiu Märss . 117 Selgroogsete evolutsiooni kivistunud tõendeid Devoni ladestust Elga Mark-Kurik . 125 Isotoobid Eesti aluspõhja uurimisel: kemostratigraafia ja keskkond Dimitri Kaljo, Tõnu Martma . 133 Vulkaanilised kihid Eesti aluspõhjas ja nende kasutamine stratigraafias Tarmo Kiipli, Toivo Kallaste . 141 Hoovused ja settekivimid Ordoviitsiumi ja Vara-Siluri Balti basseinis Enli Kiipli, Toivo Kallaste, Tarmo Kiipli . 145 Seismo-akustiline pidevsondeerimine – meetod, mis tõi murrangu Eestit naabermaadest lahutava Läänemere alade geoloogilistesse uuringutesse Igor Tuuling . 151 Viimase Skandinaavia jäätumise dünaamika Läänemerest kagus Volli Kalm, Aleksandr Gorlach, Katrin Lasberg, Katrin Kalla . 161 Mulla orgaaniline süsinik Raimo Kõlli . 169 Isotoop-paleoklimatoloogia Rein Vaikmäe, Enn Kaup, Tõnu Martma . 177 Geograafia: kirjeldavatest uurimistest analüüsiva teaduseni. -
A Synopsis of the North American Species of Byssonectria (Pezizales) with Comments on the Ontogeny of Two Species
Mycologia, 85(6), 1993, pp. 952-962. ? 1993, by The New York Botanical Garden, Bronx, NY 10458-5126 A SYNOPSIS OF THE NORTH AMERICAN SPECIES OF BYSSONECTRIA (PEZIZALES) WITH COMMENTS ON THE ONTOGENY OF TWO SPECIES DONALD H. PFISTER Department of Organismic and Evolutionary Biology, Harvard University, 22 Divinity Avenue, Cambridge, Massachusetts 02138 ABSTRACT Byssonectria, previously placed in the Hypocreales, is treated as a member of the Pezizales; Pseu- docollema and Inermisia are considered synonyms. Four species are recognized from North America: B. terrestris, a new combination which provides the oldest traceable name for the common North American and European species; B. cartilagineum, also a new combination, is based on the type species of Pseudocollema; B. fusispora; and B. seaveri, a new species for a large-spored North American collection. The ascomata of Byssonectria cartilagineum and B. terrestris are initially cleistohymenial. They open during the mesohymenial phase. The ascogonium is a multicellular filament, one cell of which produces ascogenous hyphae. This filament becomes surrounded by vegetative hyphae which build up the body of the ascoma. Young cleistohymenial ascomata could be mistaken for perithecia; such a mistake seems to account for original placement of the type species of Byssonectria in the Hypocreales. Key Words: Byssonectria, Inermisia, ontogeny, Pezizales, Pseudocollema, taxonomy The genus Byssonectria P. A. Karsten specieswas orig- previously assigned to it have been re? inally assigned to the Hypocreales and, moved subse- to other genera ofthe Hypocreales. There quently, several pyrenomycete species were seem to be no general objections to adopting the treated in it. Investigations by Rogerson and Korf name as Rogerson and Korf (Korf, 1972, 1973) (Korf, 1971) showed that the type material ofthe have done. -
June-1982-Inoculum.Pdf
SUSTAI W IWG MEMBERS ABBOTT LABORATORIES ELI LILLY AND COMPANY ANALYTAB PRODUCTS MERCK SHARP AND DOHME RESEARCH LABORATORIES AYERST RESEMCH LABORATORIES MILES LABORATORIES INC. BBL MICROBIOLOGY SYSTEMS NALGE COMPANY / SY BRON CORPORATION BELCO GLASS INC. NEW BRUNSWICK SCIENTIFIC CO. BURROUGHS WELCOME COMPANY PELCO BUTLER COUNTY WJSHROOM FMI PFIZER, INC. CAROLINA BIOLOGICAL SUPPLY COMPANY PIONEER HI-BRED INTERNATIONAL, INC. DEKALB AGRESEARCH , INC . THE QUAKER OATS COMPANY DIFCO LABORATORY PRODUCTS ROHM AND HASS COMPANY FORRESTRY SUPPLIERS INCORPORATED SCHERING CORPORATION FUNK SEEDS INTERNATIONAL SEARLE RESEARCH AND DEVELOPMENT HOECHST-ROUSSEL PHARMACEUTICALS INC. SMITH KLINE & FRENCH LABORATORIES HOFFMANN-LA ROCHE, INC. SPRINGER VERLAG NEW YORK, INC. JANSSEN PHARMACEUTICA INCORPORATED TRIARCH INCORPORATED LANE SCIENCE EqUIPMENT CO. THE WJOHN COMPANY WYETH LABORATORIES The Society is extremely grateful for the support of its Sustaining Members. These organizations are listed above in alphabetical order. Patronize them and let their repre- sentatives know of our appreciation whenever possible. OFFICERS OF THE MYCOLOGICAL SOCIETY OF AMERICA Margaret Barr Bigelow, President Donald J. S. Barr, Councilor (1981-34) Harry D. Thiers, President-elect Meredith Blackwell, Councilor (1981-82) Richard T. Hanlin, Vice-president O'Neil R. Collins, Councilor (1980-83) Roger Goos, Sec.-Treas. Ian K. Ross, Councilor (1980-83) Joseph F. Amrnirati, Councilor (1981-83) Walter J. Sundberg, Councilor (1980-83) Donald T. Wicklow, Councilor (1930-83) MYCOLOGICAL SOCIETY OF AMERICA NEWSLETTER Volume 33, No. 1, June 1982 Edited by Donald H. Pfister and Geraldine C. Kaye TABLE OF CONTENTS General Announcements .........2 Positions Wanted ............14 Calendar of Meetings and Forays ....4 Changes in Affiliation .........15 New Research. .............6 Travels, Visits. -
Truffle Trouble: What Happened to the Tuberales?
mycological research 111 (2007) 1075–1099 journal homepage: www.elsevier.com/locate/mycres Truffle trouble: what happened to the Tuberales? Thomas LÆSSØEa,*, Karen HANSENb,y aDepartment of Biology, Copenhagen University, DK-1353 Copenhagen K, Denmark bHarvard University Herbaria – Farlow Herbarium of Cryptogamic Botany, Cambridge, MA 02138, USA article info abstract Article history: An overview of truffles (now considered to belong in the Pezizales, but formerly treated in Received 10 February 2006 the Tuberales) is presented, including a discussion on morphological and biological traits Received in revised form characterizing this form group. Accepted genera are listed and discussed according to a sys- 27 April 2007 tem based on molecular results combined with morphological characters. Phylogenetic Accepted 9 August 2007 analyses of LSU rDNA sequences from 55 hypogeous and 139 epigeous taxa of Pezizales Published online 25 August 2007 were performed to examine their relationships. Parsimony, ML, and Bayesian analyses of Corresponding Editor: Scott LaGreca these sequences indicate that the truffles studied represent at least 15 independent line- ages within the Pezizales. Sequences from hypogeous representatives referred to the fol- Keywords: lowing families and genera were analysed: Discinaceae–Morchellaceae (Fischerula, Hydnotrya, Ascomycota Leucangium), Helvellaceae (Balsamia and Barssia), Pezizaceae (Amylascus, Cazia, Eremiomyces, Helvellaceae Hydnotryopsis, Kaliharituber, Mattirolomyces, Pachyphloeus, Peziza, Ruhlandiella, Stephensia, Hypogeous Terfezia, and Tirmania), Pyronemataceae (Genea, Geopora, Paurocotylis, and Stephensia) and Pezizaceae Tuberaceae (Choiromyces, Dingleya, Labyrinthomyces, Reddellomyces, and Tuber). The different Pezizales types of hypogeous ascomata were found within most major evolutionary lines often nest- Pyronemataceae ing close to apothecial species. Although the Pezizaceae traditionally have been defined mainly on the presence of amyloid reactions of the ascus wall several truffles appear to have lost this character. -
Pezizomycetes, Ascomycota) Clarifies Relationships and Evolution of Selected Life History Traits ⇑ Karen Hansen , Brian A
Molecular Phylogenetics and Evolution 67 (2013) 311–335 Contents lists available at SciVerse ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev A phylogeny of the highly diverse cup-fungus family Pyronemataceae (Pezizomycetes, Ascomycota) clarifies relationships and evolution of selected life history traits ⇑ Karen Hansen , Brian A. Perry 1, Andrew W. Dranginis, Donald H. Pfister Department of Organismic and Evolutionary Biology, Harvard University, 22 Divinity Ave., Cambridge, MA 02138, USA article info abstract Article history: Pyronemataceae is the largest and most heterogeneous family of Pezizomycetes. It is morphologically and Received 26 April 2012 ecologically highly diverse, comprising saprobic, ectomycorrhizal, bryosymbiotic and parasitic species, Revised 24 January 2013 occurring in a broad range of habitats (on soil, burnt ground, debris, wood, dung and inside living bryo- Accepted 29 January 2013 phytes, plants and lichens). To assess the monophyly of Pyronemataceae and provide a phylogenetic Available online 9 February 2013 hypothesis of the group, we compiled a four-gene dataset including one nuclear ribosomal and three pro- tein-coding genes for 132 distinct Pezizomycetes species (4437 nucleotides with all markers available for Keywords: 80% of the total 142 included taxa). This is the most comprehensive molecular phylogeny of Pyronemata- Ancestral state reconstruction ceae, and Pezizomycetes, to date. Three hundred ninety-four new sequences were generated during this Plotting SIMMAP results Introns project, with the following numbers for each gene: RPB1 (124), RPB2 (99), EF-1a (120) and LSU rDNA Carotenoids (51). The dataset includes 93 unique species from 40 genera of Pyronemataceae, and 34 species from 25 Ectomycorrhizae genera representing an additional 12 families of the class. -
<I>Hyaloscyphaceae</I> and <I>Arachnopezizaceae</I>
Persoonia 46, 2021: 26–62 ISSN (Online) 1878-9080 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE https://doi.org/10.3767/persoonia.2021.46.02 Taxonomy and systematics of Hyaloscyphaceae and Arachnopezizaceae T. Kosonen1,2, S. Huhtinen2, K. Hansen1 Key words Abstract The circumscription and composition of the Hyaloscyphaceae are controversial and based on poorly sampled or unsupported phylogenies. The generic limits within the hyaloscyphoid fungi are also very poorly under- Arachnoscypha stood. To address this issue, a robust five-gene Bayesian phylogeny (LSU, RPB1, RPB2, TEF-1α, mtSSU; 5521 epibryophytic bp) with a focus on the core group of Hyaloscyphaceae and Arachnopezizaceae is presented here, with compara- genealogical species tive morphological and histochemical characters. A wide representative sampling of Hyaloscypha supports it as Helotiales monophyletic and shows H. aureliella (subgenus Eupezizella) to be a strongly supported sister taxon. Reinforced subiculum by distinguishing morphological features, Eupezizella is here recognised as a separate genus, comprising E. au type studies reliella, E. britannica, E. roseoguttata and E. nipponica (previously treated in Hyaloscypha). In a sister group to the Hyaloscypha-Eupezizella clade a new genus, Mimicoscypha, is created for three seldom collected and poorly understood species, M. lacrimiformis, M. mimica (nom. nov.) and M. paludosa, previously treated in Phialina, Hyalo scypha and Eriopezia, respectively. The Arachnopezizaceae is polyphyletic, because Arachnoscypha forms a monophyletic group with Polydesmia pruinosa, distant to Arachnopeziza and Eriopezia; in addition, Arachnopeziza variepilosa represents an early diverging lineage in Hyaloscyphaceae s.str. The hyphae originating from the base of the apothecia in Arachnoscypha are considered anchoring hyphae (vs a subiculum) and Arachnoscypha is excluded from Arachnopezizaceae. -
Ergebnisse Des 4. Und 5. Dünenpilzworkshops Matthias Lüderitz, Maren Kamke, Peter Specht, Erhard Ludwig, Heinrich Lehmann
Lüderitz et al.: Ergebnisse des 4. und 5. Dünenpilzworkshops 355 Ergebnisse des 4. und 5. Dünenpilzworkshops Matthias Lüderitz, Maren Kamke, Peter Specht, Erhard Ludwig, Heinrich Lehmann, Hartmut Schubert, Heidrun Richter, Udo Richter Lüderitz M, Kamke M, Specht P, Ludwig E, Lehmann H, Schubert H, Richter H, Richter U (2016): Results of the 4th and 5th Dune Mycology Workshop. Zeitschrift für Mykologie 82(2): 355-448. Key words: fungi, dunes, mycological workshop, North Frisia, Sylt, Amrum, Paratrichophaea boudieri, Sabuloglossum arenarium, Sarcoleotia globosa, Clitocybe leucodiatreta, Clitocybe lichtkaempferi, Entoloma milthaleri, Cuphophyllus lacmus, Psathyrella sphaerocystis, Galerina lacustris, Galerina karstenii, Ramariopsis subarctica, Pseudolasiobolus minutissimus, Taphrina alni. Summary: The 4th and 5th “Meeting of German Mycologists”, with the intention to investigate maritime, costal and inland dunes, took place in the town of Leck wich is situated in the northern part of North-Frisia in Schleswig-Holstein / Germany. The examined areas were inland and costal dunes as well as the expanding dunes of the Isle of Amrum and the Isle of Sylt. The regions mentioned are described in view of geology, geomorphology, geobotany, and there is added a brief summary about former mycological activities. This report gives a survey of the mushroom-collections, Ascomycetes and Basidiomycetes, during the two meetings. Two species are described as new to science: Clitocybe lichtkaempferi P. Specht spec. nov. and Entoloma milthaleri M. Kamke & Lüderitz spec. nov., are discussed in detail. During the two meetings the area “Leckfeld-Nord” was visited several times which deepened the impression that this area is a hotspot of national and international importance for fungi, and should be placed under protection.