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H3.3 Macaronesian Inland Cliff
European Red List of Habitats - Screes Habitat Group H3.3 Macaronesian inland cliff Summary The perennial vegetation of crevices and ledges of cliff faces in Macaronesia away from coastal salt-spray is of very diverse character - some, for example, dominated by succulents, others rich in ferns and bryophytes characteristic of shaded situations - and it includes several hundreds of taxa endemic to the archipelagoes. The main threats are mountaineering and rock climbing, outdoor sports and leisure activities, and construction of infrastructures such as roads and motorways. Synthesis There is no evidence of significant past reductions, either in the last 50 years or historically, and also future prospects are good, as no serious threats are envisaged, besides touristic/leisure activities and putative faulty environmental impact assessments that may overlook this habitat as valuable. Reduction in quantity, reduction in quality and criteria of geographic distribution yield the Least Concern (LC) category. In spite of the LC category, conservation policy and management should restrict to the maximum any threat to or reduction of the habitat, as it has a very high conservation value, because of high endemism of species and communities with many local and regional variaties. Overall Category & Criteria EU 28 EU 28+ Red List Category Red List Criteria Red List Category Red List Criteria Least Concern - Least Concern - Sub-habitat types that may require further examination Four general subtypes can be distinguished based on species composition and different ecological conditions. However, at present, no data are available to carry out an individual assessment of each of them. In the future, if detailed plot sampling has been carried out, such an evaluation may be possible. -
The Genomic Impact of Mycoheterotrophy in Orchids
fpls-12-632033 June 8, 2021 Time: 12:45 # 1 ORIGINAL RESEARCH published: 09 June 2021 doi: 10.3389/fpls.2021.632033 The Genomic Impact of Mycoheterotrophy in Orchids Marcin J ˛akalski1, Julita Minasiewicz1, José Caius2,3, Michał May1, Marc-André Selosse1,4† and Etienne Delannoy2,3*† 1 Department of Plant Taxonomy and Nature Conservation, Faculty of Biology, University of Gdansk,´ Gdansk,´ Poland, 2 Institute of Plant Sciences Paris-Saclay, Université Paris-Saclay, CNRS, INRAE, Univ Evry, Orsay, France, 3 Université de Paris, CNRS, INRAE, Institute of Plant Sciences Paris-Saclay, Orsay, France, 4 Sorbonne Université, CNRS, EPHE, Muséum National d’Histoire Naturelle, Institut de Systématique, Evolution, Biodiversité, Paris, France Mycoheterotrophic plants have lost the ability to photosynthesize and obtain essential mineral and organic nutrients from associated soil fungi. Despite involving radical changes in life history traits and ecological requirements, the transition from autotrophy Edited by: Susann Wicke, to mycoheterotrophy has occurred independently in many major lineages of land Humboldt University of Berlin, plants, most frequently in Orchidaceae. Yet the molecular mechanisms underlying this Germany shift are still poorly understood. A comparison of the transcriptomes of Epipogium Reviewed by: Maria D. Logacheva, aphyllum and Neottia nidus-avis, two completely mycoheterotrophic orchids, to other Skolkovo Institute of Science autotrophic and mycoheterotrophic orchids showed the unexpected retention of several and Technology, Russia genes associated with photosynthetic activities. In addition to these selected retentions, Sean W. Graham, University of British Columbia, the analysis of their expression profiles showed that many orthologs had inverted Canada underground/aboveground expression ratios compared to autotrophic species. Fatty Craig Barrett, West Virginia University, United States acid and amino acid biosynthesis as well as primary cell wall metabolism were among *Correspondence: the pathways most impacted by this expression reprogramming. -
The Diversity of Wild Orchids in the Southern Slope of Mount Merapi, Yogyakarta, Indonesia Eight Years After the 2010 Eruption
BIODIVERSITAS ISSN: 1412-033X Volume 21, Number 9, September 2020 E-ISSN: 2085-4722 Pages: 4457-4465 DOI: 10.13057/biodiv/d210964 The diversity of wild orchids in the southern slope of Mount Merapi, Yogyakarta, Indonesia eight years after the 2010 eruption FEBRI YUDA KURNIAWAN1,2,♥, FAUZANA PUTRI2,3, AHMAD SUYOKO2,3, HIMAWAN MASYHURI2,3, MAYA PURQI SULISTIANINGRUM2,3, ENDANG SEMIARTI3,♥♥ 1Postgraduate School, Universitas Gadjah Mada. Jl. Teknika Utara, Sleman 55281, Yogyakarta, Indonesia. Tel./fax. +62-274-544975, email: [email protected] 2Biology Orchid Study Club (BiOSC), Faculty of Biology, Universitas Gadjah Mada. Jl. Teknika Selatan, Sekip Utara, Sleman 55281, Yogyakarta, Indonesia 3Department of Tropical Biology, Faculty of Biology, Universitas Gadjah Mada. Jl. Teknika Selatan, Sekip Utara, Sleman 55281, Yogyakarta, Indonesia. Tel./fax.: +62-274-580839, email: [email protected] Manuscript received: 21 August 2020. Revision accepted: 31 August 2020. Abstract. Kurniawan FY, Putri F, Suyoko A, Masyhuri H, Sulistianingrum MP, Semiarti E. 2020. The diversity of wild orchids in the southern slope of Mount Merapi, Yogyakarta, Indonesia eight years after the 2010 eruption. Biodiversitas 21: 4457-4465. The ecosystem of the slopes of Mount Merapi is mountain tropical forest which is frequently affected by volcanic activities. The dynamics of the volcano affect the diversity and abundance of orchids in the ecosystem. Tritis is an area included in the Turgo Hill of the southern slope of Mount Merapi and is under the management of Mount Merapi National Park. The ecosystem in Tritis area classified as lower mountain forest and it has been affected by Mount Merapi eruption. This study aimed to do an inventory of orchid species in Tritis to know the diversity and abundance of orchids that exist in this area. -
Review Article Conservation Status of the Family Orchidaceae in Spain Based on European, National, and Regional Catalogues of Protected Species
Hind ile Scientific Volume 2018, Article ID 7958689, 18 pages https://doi.org/10.1155/2018/7958689 Hindawi Review Article Conservation Status of the Family Orchidaceae in Spain Based on European, National, and Regional Catalogues of Protected Species Daniel de la Torre Llorente© Biotechnology-Plant Biology Department, Higher Technical School of Agronomic, Food and Biosystems Engineering, Universidad Politecnica de Madrid, 28140 Madrid, Spain Correspondence should be addressed to Daniel de la Torre Llorente; [email protected] Received 22 June 2017; Accepted 28 December 2017; Published 30 January 2018 Academic Editor: Antonio Amorim Copyright © 2018 Daniel de la Torre Llorente. Tis is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Tis report reviews the European, National, and Regional catalogues of protected species, focusing specifcally on the Orchidaceae family to determine which species seem to be well-protected and where they are protected. Moreover, this examination highlights which species appear to be underprotected and therefore need to be included in some catalogues of protection or be catalogued under some category of protection. Te national and regional catalogues that should be implemented are shown, as well as what species should be included within them. Tis report should be a helpful guideline for environmental policies about orchids conservation in Spain, at least at the regional and national level. Around 76% of the Spanish orchid fora are listed with any fgure of protection or included in any red list, either nationally (about 12-17%) or regionally (72%). -
“Dynamic Speciation Processes in the Mediterranean Orchid Genus Ophrys L
“DYNAMIC SPECIATION PROCESSES IN THE MEDITERRANEAN ORCHID GENUS OPHRYS L. (ORCHIDACEAE)” Tesi di Dottorato in Biologia Avanzata, XXIV ciclo (Indirizzo Sistematica Molecolare) Universitá degli Studi di Napoli Federico II Facoltá di Scienze Matematiche, Fisiche e Naturali Dipartimento di Biologia Strutturale e Funzionale 1st supervisor: Prof. Salvatore Cozzolino 2nd supervisor: Prof. Serena Aceto PhD student: Dott. Hendrik Breitkopf 1 Cover picture: Pseudo-copulation of a Colletes cunicularius male on a flower of Ophrys exaltata ssp. archipelagi (Marina di Lesina, Italy. H. Breitkopf, 2011). 2 TABLE OF CONTENTS GENERAL INTRODUCTION CHAPTER 1: MULTI-LOCUS NUCLEAR GENE PHYLOGENY OF THE SEXUALLY DECEPTIVE ORCHID GENUS OPHRYS L. (ORCHIDACEAE) CHAPTER 2: ANALYSIS OF VARIATION AND SPECIATION IN THE OPHRYS SPHEGODES SPECIES COMPLEX CHAPTER 3: FLORAL ISOLATION IS THE MAIN REPRODUCTIVE BARRIER AMONG CLOSELY RELATED SEXUALLY DECEPTIVE ORCHIDS CHAPTER 4: SPECIATION BY DISTURBANCE: A POPULATION STUDY OF CENTRAL ITALIAN OPHRYS SPHEGODES LINEAGES CONTRIBUTION OF CO-AUTHORS ACKNOWLEDGEMENTS 3 GENERAL INTRODUCTION ORCHIDS With more than 22.000 accepted species in 880 genera (Pridgeon et al. 1999), the family of the Orchidaceae is the largest family of angiosperm plants. Recently discovered fossils document their existence for at least 15 Ma. The last common ancestor of all orchids has been estimated to exist about 80 Ma ago (Ramirez et al. 2007, Gustafsson et al. 2010). Orchids are cosmopolitan, distributed on all continents and a great variety of habitats, ranging from deserts and swamps to arctic regions. Two large groups can be distinguished: Epiphytic and epilithic orchids attach themselves with aerial roots to trees or stones, mostly halfway between the ground and the upper canopy where they absorb water through the velamen of their roots. -
Cypripediaceae Lindl
Acta Botanica Neerlandica 14 (1965) 230-241 The Place of Epipogium in the System of Orchidales P. Vermeulen [Hugo de Vries-Laboratorium, Amsterdam) (;received April 13lh, 1965) Abstract stamen The (Ai) of Epipogium has a discrete filament and there is no broad in sertion of the large anther. In the anther the pollinia and the caudicles develop from of Orchioideae in of differently those the a way characteristic the genus. The rostellum consists of a simple gland crowning the top of the median stigma- tic lobe. This gland lies on top (is acrotonic) of the pollinia (and not basitonic). make should be refer- The common characteristics it clear that the genus Epipogium red to the contribe of the Neottianthae (subfamilia Epidendroideae). 1. The System of Orchidales Before assigning Epipogium a place in the system of orchidaceous plants, one has to choose the system one prefers to follow. My personal opinion being at variance with that of other modern taxonomists (Mansfeld, Dressler & Dodson, Garay and Melchior), it seems best to outline here the system I prefer. Ordo: ORCHIDALES, flowers zygomorphic, usually resupinate, epi- with the abaxial gynous, a gynostemium only stamens present (Ai + ai + aa) and these fertile or partly staminodial. Seeds dust- fine (usually) and after germination mycotrophic. (Fig. 1) Familia 1. Apostasiaceae Lindl.: perianth nearly regular, gynostemium short with Ai fertile or a staminodial, ai + a fertile, style and stamens partly free, anthers oblong; pollen powdery. No rostel- lum. Stigma terminal. Familia 2. Cypripediaceae Lindl.: median petal (lip) forming the label- lum slipper-like; gynostemium longer andbent with Ai represented orbicular by a staminod, ai + aa fertile, anther to oblong; pollen sticky, no pollinia. -
Circumscribing Genera in the European Orchid Flora: a Subjective
Ber. Arbeitskrs. Heim. Orchid. Beiheft 8; 2012: 94 - 126 Circumscribing genera in the European orchid lora: a subjective critique of recent contributions Richard M. BATEMAN Keywords: Anacamptis, Androrchis, classiication, evolutionary tree, genus circumscription, monophyly, orchid, Orchidinae, Orchis, phylogeny, taxonomy. Zusammenfassung/Summary: BATEMAN , R. M. (2012): Circumscribing genera in the European orchid lora: a subjective critique of recent contributions. – Ber. Arbeitskrs. Heim. Orch. Beiheft 8; 2012: 94 - 126. Die Abgrenzung von Gattungen oder anderen höheren Taxa erfolgt nach modernen Ansätzen weitestgehend auf der Rekonstruktion der Stammesgeschichte (Stamm- baum-Theorie), mit Hilfe von großen Daten-Matrizen. Wenngleich aufgrund des Fortschritts in der DNS-Sequenzierungstechnik immer mehr Merkmale in der DNS identiiziert werden, ist es mindestens genauso wichtig, die Anzahl der analysierten Planzen zu erhöhen, um genaue Zuordnungen zu erschließen. Die größere Vielfalt mathematischer Methoden zur Erstellung von Stammbäumen führt nicht gleichzeitig zu verbesserten Methoden zur Beurteilung der Stabilität der Zweige innerhalb der Stammbäume. Ein weiterer kontraproduktiver Trend ist die wachsende Tendenz, diverse Datengruppen mit einzelnen Matrizen zu verquicken, die besser einzeln analysiert würden, um festzustellen, ob sie ähnliche Schlussfolgerungen bezüglich der Verwandtschaftsverhältnisse liefern. Ein Stammbaum zur Abgrenzung höherer Taxa muss nicht so robust sein, wie ein Stammbaum, aus dem man Details des Evo- lutionsmusters -
Structuration Écologique Et Évolutive Des Symbioses Mycorhiziennes Des
Universit´ede La R´eunion { Ecole´ doctorale Sciences Technologie Sant´e{ Facult´edes Sciences et des Technologies Structuration ´ecologique et ´evolutive des symbioses mycorhiziennes des orchid´ees tropicales Th`ese de doctorat pr´esent´eeet soutenue publiquement le 19 novembre 2010 pour l'obtention du grade de Docteur de l'Universit´ede la R´eunion (sp´ecialit´eBiologie des Populations et Ecologie)´ par Florent Martos Composition du jury Pr´esidente: Mme Pascale Besse, Professeur `al'Universit´ede La R´eunion Rapporteurs : Mme Marie-Louise Cariou, Directrice de recherche au CNRS de Gif-sur-Yvette M. Raymond Tremblay, Professeur `al'Universit´ede Porto Rico Examinatrice : Mme Pascale Besse, Professeur `al'Universit´ede La R´eunion Directeurs : M. Thierry Pailler, Ma^ıtre de conf´erences HDR `al'Universit´ede La R´eunion M. Marc-Andr´e Selosse, Professeur `al'Universit´ede Montpellier Laboratoire d'Ecologie´ Marine Institut de Recherche pour le D´eveloppement 2 R´esum´e Les plantes n'exploitent pas seules les nutriments du sol, mais d´ependent de champignons avec lesquels elles forment des symbioses mycorhiziennes dans leurs racines. C'est en particulier vrai pour les 25 000 esp`ecesd'orchid´eesactuelles qui d´ependent toutes de champignons mycorhiziens pour accomplir leur cycle de vie. Elles produisent des graines microscopiques qui n'ont pas les ressources nutritives pour germer, mais qui d´ependent de la pr´esencede partenaires ad´equatspour nourrir l'embryon (h´et´erotrophie)jusqu’`al'apparition des feuilles (autotrophie). Les myco- rhiziens restent pr´esents dans les racines des adultes o`uils contribuent `ala nutrition, ce qui permet d'´etudierplus facilement la diversit´edes symbiotes `al'aide des ou- tils g´en´etiques.Conscients des biais des ´etudesen faveur des r´egionstemp´er´ees, nous avons ´etudi´ela diversit´edes mycorhiziens d'orchid´eestropicales `aLa R´eunion. -
The Orchids of the Isle of Formentera
Jour. Eur. Orch. 37 (4): 501 – 528. 2005. Barbara Klahr Translated by Dr.Eckhard Kiehl The Orchids of the Isle of Formentera Keywords Orchidaceae; Aceras anthropophorum, Barlia robertiana, Gennaria diphylla, Neotinea maculata, Ophrys bombyliflora, O. dyris, O. cf. fabrella, O. fusca, O. speculum, O. tenthredinifera, Orchis collina, O. fragrans, Serapias parviflora; Formentera, Pityuses, Balearic Islands; distribution; ecology; endangerment; protection. Summary Klahr, B. (2005): The orchids of Formentera.- Jour. Eur. Orch. 37 (4): 501 XXX. A short review of history and geography of Formentera is given; aspects of flora and fauna of a south mediterranean Island, survival of plants in a half-arid zone without any wells or fresh ground water. As the most southern Island of the Pityuses, Formentera belongs climatically more to Africa than to Europe. It is a very rocky eroded Island after having had a long period without agriculture. Endemic species in flora and fauna are mentioned. Wild Orchids are growing on this small Island mainly in the higher regions of the plateau La Mola and Cap de Barbaria. There is not as much pastureland as in other mediterranean countries. Ophrys and Orchis predominate.. Most areas of Formentera were explored during the whole year, also difficult to reach regions like “Torrentes” (Canyons). The period of my observation is 2002 - 2005. The Orchids are endangered as a result of the reinforced agriculture and chemical fertilizing, subsidized by the EU, and by increasing building activities. Centuries fallow agricultural land that makes very interesting biotopes will be destroyed. The orchids of Formentera are bibliographically quoted; the results are to be supplemented with four new found species and new sites. -
The Threads That Bind: Symbiotic Fungi in the Garden
veryone knows that a plant they formed a symbiosis with fungi, has leaves and flowers, and whose growing network of threads (the below ground its roots mycelium) allowed them to explore branch and explore the soil. the soil and forage for phosphate. In Yet that picture misses an return the plant provided the fungus essential component as with organic compounds. EEvirtually all plants live with a fungus in Three lines of evidence support this a symbiosis called a mycorrhiza (from story: first, molecular evidence shows the Greek, meaning ‘fungus root’) that that this group of fungi originated at or is essential to both partners. The plants before that distant time; second, we get phosphate and some other nutrients find plants that form this type of mycor- from the fungus, and the fungus gets all rhiza in all branches of the evolutionary its sugars from the plant. Plants gain tree of land plants, showing that they The threads other benefits too from the symbiosis must all have shared a common mycor- and sustainable farming, forestry and rhizal ancestor; and most convincingly, gardening will all increasingly rely on there are fossils from Devonian rocks understanding how it behaves. nearly 400 million years old that contain the fungal structures (Fig. 1a) that bind: Meet the ancestors and older Ordovician spores that are To explain why they are mycorrhizal, unequivocally from the group. This we need to go back to when plants first ancestral type is known as an arbus- colonized the land more than 400 cular mycorrhiza, after the tiny struct- million years ago, in the Ordovician ures called arbuscules that develop symbiotic fungi and Devonian periods. -
The Vascular Flora of Rarău Massif (Eastern Carpathians, Romania). Note Ii
Memoirs of the Scientific Sections of the Romanian Academy Tome XXXVI, 2013 BIOLOGY THE VASCULAR FLORA OF RARĂU MASSIF (EASTERN CARPATHIANS, ROMANIA). NOTE II ADRIAN OPREA1 and CULIŢĂ SÎRBU2 1 “Anastasie Fătu” Botanical Garden, Str. Dumbrava Roşie, nr. 7-9, 700522–Iaşi, Romania 2 University of Agricultural Sciences and Veterinary Medicine Iaşi, Faculty of Agriculture, Str. Mihail Sadoveanu, nr. 3, 700490–Iaşi, Romania Corresponding author: [email protected] This second part of the paper about the vascular flora of Rarău Massif listed approximately half of the whole number of the species registered by the authors in their field trips or already included in literature on the same area. Other taxa have been added to the initial list of plants, so that, the total number of taxa registered by the authors in Rarău Massif amount to 1443 taxa (1133 species and 310 subspecies, varieties and forms). There was signaled out the alien taxa on the surveyed area (18 species) and those dubious presence of some taxa for the same area (17 species). Also, there were listed all the vascular plants, protected by various laws or regulations, both internal or international, existing in Rarău (i.e. 189 taxa). Finally, there has been assessed the degree of wild flora conservation, using several indicators introduced in literature by Nowak, as they are: conservation indicator (C), threat conservation indicator) (CK), sozophytisation indicator (W), and conservation effectiveness indicator (E). Key words: Vascular flora, Rarău Massif, Romania, conservation indicators. 1. INTRODUCTION A comprehensive analysis of Rarău flora, in terms of plant diversity, taxonomic structure, biological, ecological and phytogeographic characteristics, as well as in terms of the richness in endemics, relict or threatened plant species was published in our previous note (see Oprea & Sîrbu 2012). -
Phylogeny, Character Evolution and the Systematics of Psilochilus (Triphoreae)
THE PRIMITIVE EPIDENDROIDEAE (ORCHIDACEAE): PHYLOGENY, CHARACTER EVOLUTION AND THE SYSTEMATICS OF PSILOCHILUS (TRIPHOREAE) A Dissertation Presented in Partial Fulfillment of the Requirements for The Degree Doctor of Philosophy in the Graduate School of the Ohio State University By Erik Paul Rothacker, M.Sc. ***** The Ohio State University 2007 Doctoral Dissertation Committee: Approved by Dr. John V. Freudenstein, Adviser Dr. John Wenzel ________________________________ Dr. Andrea Wolfe Adviser Evolution, Ecology and Organismal Biology Graduate Program COPYRIGHT ERIK PAUL ROTHACKER 2007 ABSTRACT Considering the significance of the basal Epidendroideae in understanding patterns of morphological evolution within the subfamily, it is surprising that no fully resolved hypothesis of historical relationships has been presented for these orchids. This is the first study to improve both taxon and character sampling. The phylogenetic study of the basal Epidendroideae consisted of two components, molecular and morphological. A molecular phylogeny using three loci representing each of the plant genomes including gap characters is presented for the basal Epidendroideae. Here we find Neottieae sister to Palmorchis at the base of the Epidendroideae, followed by Triphoreae. Tropidieae and Sobralieae form a clade, however the relationship between these, Nervilieae and the advanced Epidendroids has not been resolved. A morphological matrix of 40 taxa and 30 characters was constructed and a phylogenetic analysis was performed. The results support many of the traditional views of tribal composition, but do not fully resolve relationships among many of the tribes. A robust hypothesis of relationships is presented based on the results of a total evidence analysis using three molecular loci, gap characters and morphology. Palmorchis is placed at the base of the tree, sister to Neottieae, followed successively by Triphoreae sister to Epipogium, then Sobralieae.