Survey of the Phyla- Animalia, Invertebrates the Kingdom Animalia Is in the Domain Eukarya and in the Supergroup Unikonta

Total Page:16

File Type:pdf, Size:1020Kb

Survey of the Phyla- Animalia, Invertebrates the Kingdom Animalia Is in the Domain Eukarya and in the Supergroup Unikonta Survey of the Phyla- Animalia, Invertebrates The Kingdom Animalia is in the domain Eukarya and in the supergroup Unikonta. They are in the group Opisthkonta with fungi. Both groups have different unicellular organisms that they are their common ancestor. That fact indicates the groups became multicellular organisms independent of one another. Characteristics of the Animal Kingdom 1. Animals are multicellular, heterotrophic, ingestive and eukaryotic. 2. The cells lack cell walls and are held together by structural proteins which are mostly collagen. They have intracellular junctions such as tight junctions, desmosomes and gap junctions. 3. Animal cells have nervous and muscle tissues found only in this kingdom. 4. Most animals have a diploid life cycle with a sperm fertilizing an egg. The zygote undergoes cleavage forming a blastula (hollow ball of cells). The blastula undergoes mass movement of cells to form a gastrula giving rise to three layers of tissue, endoderm, mesoderm and ectoderm. Often there is a larval stage to the animal which is sexually immature. It often will undergo metamorphosis to become an adult. 5. All animals contain both homeotic genes (any of the genes that control the overall body plan of animal by controlling the developmental fate of a group of cells) and homeobox (a 180- nucleotide sequence with a homeotic gene) encoding the part of the protein that binds to the DNA of the genes regulated by the protein. There is an increase in the number of these genes with an increase in the complexity of the animal. The protists most closely related to animals are the choanoflagellates. It is flagellated with a collar to collect food. It will form colonies. Diagramed are the steps thought to have given to evolution of multicellular animals. Other interesting points about animals Embryonic development -Deuterostomes versus protostomes. During development many animals first form a hollow ball of cells or blastula. Afterward that there is a mass movement of the cells called gastrulation. This process results in three layers of tissue being established. Ectoderm-becomes skin and nervous tissue Mesoderm-notochord, lining of coelom, kidneys, muscles and bone and circulatory system Endoderm-interior lining of organs and liver, pancreas, lungs and lining of digestive tract. During this process of gastrulation, the first opening to the gut or archenteron forms. In deuterostomes, this opening becomes the anus but in protostomes it becomes the mouth. Body plans- Asymmetrical-These animals lack orientation like the sponges. Radial symmetry-The body plan is around an axis and any plane going through the axis will produce opposite halves. -Bilaterial symmetry The body forms a body in a longitudinal plan that divides the body into two equal but opposite halves. It allows the senses to be concentrated up in one area. Can increase awareness, mobility and predation. -Bilaterial symmetry The body forms a body in a longitudinal plant that divides the body into two equal but opposite halves. Body cavities (coeloms) -Acoelomate-These animals do not have a body cavity like a flat worm or jelly fish -True coelom-The body cavity is lined with tissue derived from the mesoderm. -Pseudocoelom-The body cavity is lined with mesoderm on the outer part and with endoderm on the inside. Round worms have pseudocoeloms. Clade Parazoa or sponges-Most closely related to colonial choano-flagellates. These protists and animals have a common ancestor. Phylum Porifera 1. Sessile with no specialized tissue i.e. nerves or muscle. 2. Size 1 cm-2 m. Mostly marine species with few freshwater. The body of a sponge has a cavity called a spongocoel. The body is perforated with pores. Water flows into the pores and into the spongocoel and then out a larger opening called the osculum. There are two layers of cells with a gelatinous layer in between called the mesophyl. The outside of the body is lined with epidermal cells. 3. The pores are lined with cells (porocytes). The inside layer is lined with cells (choanocytes like choanoflagellates ). The flagella of choanocytes beat creating a water current. The choanocyte cell has a collar with a flagella. It also secretes mucus to filter and catch food. There are also amoebocytes which take food from the choanocytes and deliver it to the epidermal cells. 4. Sponges are hermaphrodites. Gametes come from amoebocytes and choanocytes. Eggs reside in the mesohyl and sperm from neighboring sponges fertilize them. Clade Eumetozoa-Animals with true tissues. Two clades are found in Clade Eumetazoa-Clade Radiata and Clade Bilateria Clade Radiata-Animals with radial symmetry (top and bottom with no head or rear end). Radiata has two tissue layers ectoderm and endoderm and no mesoderm resulting in dipolblastic embryos (no mesoderm). Phylum Cnidaria-Jellyfish and hydra-The basic body plan is a sac with a gastrovascular cavity (GVC). The single opening functions as both the mouth and the anus. Two variations of this body plan-the polyp and medusa. The polyp is a cylinder form that is sessile and adheres to the bottom of the water. The medusa is a "flattened-version of the polyp upside- down". It moves in the water by drifting and contracting its bell shaped body. Some species exists as polyps and others as medusas and others will have both forms in their life cycles. Both forms have two layers of tissue with a gelatinous layer of material in between called the mesoglea. Surrounding the mouth of these animals are a ring of tentacles. These tentacles have stinging cells called cnidocyte cells. These cells have poisonous, little dart like structures called nematocysts. No muscles but cell will bundles of contractile fibers. There is also nerve net that can detect stimuli causing the organism to react. The gastrovascular cavity has specialized cells that release digestive enzymes to aid in digestion. Class Hydrozoa-(Portuguese man-of-war, hydras, some corals). Mostly marine. Both medusa and polyp forms present. Polyp form usually colonial. Class Scypphozoa-(jellies, sea nettles). All marine. Polyp form greatly reduced. Medusa form up to 2 m in diameter. Class Cubozoa-(box jellies,and sea wasp) All marine. Polyp form greatly reduced. Medusa forms a box like shape with complex eyes and potent venom. Class Anthozoa-(sea anemones, most corals, and sea fans). Medusa stage completely absent sessile, many colonial. Phylum Ctenophora-Superficially looks like cnidarian medusas. These are the comb-jellies. Small and sperical or ovoid. 8 rows of comblike plates fused cilia. Clade Bilateria- These animals have bilateral symmetry. Gives animals dorsal and ventral side as well as an anterior (head) and posterior (tail) end. Cephalization is the movement of sensory organs to the anterior end. The anterior end is first to encounter danger, food and other important stimuli. This clade divides up three smaller clades, Deuterostomia, Lophotrochozoa, Ecdysozoa The first clade are the deuterostomes. The deuterostomes are characterizied by their embryonic development and formation of a deuterostome. The second clade are the lophotrochozoans either has a lophophore (a crown of ciliated tentacles function in feeding) or the development of a trochophore larva. The third clade is Ecydysozoa. These are animals that form an exoskeleton or thick cuticle. As the animals grow they molt or shed their outer covering (ecdysis). Clade Lophotrochozoa Phylum Platyhelminthes: Flatworms a. Have gastrovascular cavity with pharynx as mouth on ventral side b. Acoelomates c. Nervous system is a pair of ventral nerve cords. Can have eye spots on anterior end that responds to light. In the anterior region one can find a ganglion. d. Nitrogenous wastes removed by a “flame cell” system Four Classes found in this phylum Class Tubellaria-Mosly free-living, most marine, few terrestrial, predators, scavengers; body surface ciliated. Class Mongenea- Marine and freshwater parasites on external surfaces of fish. Class Trematoda- Flukes are parasites of vertebrates. Complicated life history witn intermediate host. Class Cestodea-Tapeworms with scolex. No head or digestive system. Complicated life history. Phylum Rotifera-Rotifers have pseudocoelomates, jaws, crowns of cilia and a complete digestive tract. Complete digestive tract allows for individual organs and processing of food differently for maximum extraction of nutrients. While many rotifers are smaller than single-celled protista, they are much more complicated than even flat worms. Some reproduction in some species is parthenogenesis. Phylum Ectoprocta- called moss animals because they resemble moss. Most species are marine and are small and form colonies. Most of the colony is enclosed in a hard skeleton with the lophophores that extend through the pores when feeding. Both phyla have lophophores Phylum Brachiopods-Look like clams but stand up vertically. Called lampshells. Attach to bottom by a stalk. The shells are opened slightly to allow water to flow through lophophores. Phylum Nemertea-Ribbon worms seem to be acoelmate but contain a fluid filled proboscis sac which is derived from a true coelom. A proboscis is a long retractable hollow tube at the anterior end. Used to probe enviroment, capture Phylum Mollusca-Soft-bodied animals with shells. This phylum includes snails, slugs oysters, clams octopuses and squid. Most are marine with some fresh-water and terrestrial species. They have three main parts: -Muscular foot for locomotion -Visceral mass that contains most of the internal organs. -A mantle, which is a heavy fold of tissue that surrounds the visceral mass and secretes the shell. Many will contain a radula or rasping tongue to scrap food from surfaces. Some species are monoecious while others are dioecious. Gonads are located in the viceral mass. It is possible that mollusks evolved before annelids because they lack segmentation or from an annelid like ancestor as they both have trochophore larva. Most have open circulatory systems with a heart. Structures for gas exchange. Ventral nerve chords with sensory organs.
Recommended publications
  • Receptor-Like Kinases from Arabidopsis Form a Monophyletic Gene Family Related to Animal Receptor Kinases
    Receptor-like kinases from Arabidopsis form a monophyletic gene family related to animal receptor kinases Shin-Han Shiu and Anthony B. Bleecker* Department of Botany and Laboratory of Genetics, University of Wisconsin, Madison, WI 53706 Edited by Elliot M. Meyerowitz, California Institute of Technology, Pasadena, CA, and approved July 6, 2001 (received for review March 22, 2001) Plant receptor-like kinases (RLKs) are proteins with a predicted tionary relationship between the RTKs and RLKs within the signal sequence, single transmembrane region, and cytoplasmic recognized superfamily of related eukaryotic serine͞threonine͞ kinase domain. Receptor-like kinases belong to a large gene family tyrosine protein kinases (ePKs). An earlier phylogenetic analysis with at least 610 members that represent nearly 2.5% of Arabi- (22), using the six RLK sequences available at the time, indicated dopsis protein coding genes. We have categorized members of this a close relationship between plant sequences and animal RTKs, family into subfamilies based on both the identity of the extracel- although RLKs were placed in the ‘‘other kinase’’ category. A more lular domains and the phylogenetic relationships between the recent analysis using only plant sequences led to the conclusion that kinase domains of subfamily members. Surprisingly, this structur- the 18 RLKs sampled seemed to form a separate family among the ally defined group of genes is monophyletic with respect to kinase various eukaryotic kinases (23). The recent completion of the domains when compared with the other eukaryotic kinase families. Arabidopsis genome sequence (5) provides an opportunity for a In an extended analysis, animal receptor kinases, Raf kinases, plant more comprehensive analysis of the relationships between these RLKs, and animal receptor tyrosine kinases form a well supported classes of receptor kinases.
    [Show full text]
  • The NEURONS and NEURAL SYSTEM: a 21St CENTURY PARADIGM
    The NEURONS and NEURAL SYSTEM: a 21st CENTURY PARADIGM This material is excerpted from the full β-version of the text. The final printed version will be more concise due to further editing and economical constraints. A Table of Contents and an index are located at the end of this paper. A few citations have yet to be defined and are indicated by “xxx.” James T. Fulton Neural Concepts [email protected] July 19, 2015 Copyright 2011 James T. Fulton 2 Neurons & the Nervous System 4 The Architectures of Neural Systems1 [xxx review cogn computation paper and incorporate into this chapter ] [xxx expand section 4.4.4 as a key area of importance ] [xxx Text and semantics needs a lot of work ] Don’t believe everything you think. Anonymous bumper sticker You must not fool yourself, and you are the easiest person to fool Richard Feynman I am never content until I have constructed a model of what I am studying. If I succeed in making one, I understand; otherwise, I do not. William Thomson (Lord Kelvin) It is the models that tell us whether we understand a process and where the uncertainties remain. Bridgeman, 2000 4.1 Background [xxx chapter is a hodge-podge at this time 29 Aug 11 ] The animal kingdom shares a common neurological architecture that is ramified in a specific species in accordance with its station in the phylogenic tree and the ecological domain. This ramification includes not only replication of existing features but further augmentation of the system using new and/or modified features.
    [Show full text]
  • Classification of Plants
    Classification of Plants Plants are classified in several different ways, and the further away from the garden we get, the more the name indicates a plant's relationship to other plants, and tells us about its place in the plant world rather than in the garden. Usually, only the Family, Genus and species are of concern to the gardener, but we sometimes include subspecies, variety or cultivar to identify a particular plant. Starting from the top, the highest category, plants have traditionally been classified as follows. Each group has the characteristics of the level above it, but has some distinguishing features. The further down the scale you go, the more minor the differences become, until you end up with a classification which applies to only one plant. Written convention indicated with underlined text KINGDOM Plant or animal DIVISION (PHYLLUM) CLASS Angiospermae (Angiosperms) Plants which produce flowers Gymnospermae (Gymnosperms) Plants which don't produce flowers SUBCLASS Dicotyledonae (Dicotyledons, Dicots) Plants with two seed leaves Monocotyledonae (Monocotyledons, Monocots) ‐ Plants with one seed leaf SUPERORDER A group of related Plant Families, classified in the order in which they are thought to have developed their differences from a common ancestor. There are six Superorders in the Dicotyledonae (Magnoliidae, Hamamelidae, Caryophyllidae, Dilleniidae, Rosidae, Asteridae), and four Superorders in the Monocotyledonae (Alismatidae, Commelinidae, Arecidae, Liliidae). The names of the Superorders end in ‐idae ORDER ‐ Each Superorder is further divided into several Orders. The names of the Orders end in ‐ales FAMILY ‐ Each Order is divided into Families. These are plants with many botanical features in common, and is the highest classification normally used.
    [Show full text]
  • S I Section 4
    3/31/2011 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Porifera Ecdysozoa Deuterostomia Lophotrochozoa Cnidaria and Ctenophora Cnidaria and Protostomia SSiection 4 Radiata Bilateria Professor Donald McFarlane Parazoa Eumetazoa Lecture 13 Invertebrates: Parazoa, Radiata, and Lophotrochozoa Ancestral colonial choanoflagellate 2 Traditional classification based on Parazoa – Phylum Porifera body plans Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Parazoa 4 main morphological and developmental Sponges features used Loosely organized and lack Porifera Ecdysozoa Cnidaria and Ctenophora tissues euterostomia photrochozoa D 1. o Presence or absence of different tissue L Multicellular with several types of types Protostomia cells 2. Type of body symmetry Radiata Bilateria 8,000 species, mostly marine Parazoa Eumetazoa 3. Presence or absence of a true body No apparent symmetry cavity Ancestral colonial Adults sessile, larvae free- choanoflagellate 4. Patterns of embryonic development swimming 3 4 1 3/31/2011 Water drawn through pores (ostia) into spongocoel Flows out through osculum Reproduce Choanocytes line spongocoel Sexually Most hermapppgggphrodites producing eggs and sperm Trap and eat small particles and plankton Gametes are derived from amoebocytes or Mesohyl between choanocytes and choanocytes epithelial cells Asexually Amoebocytes absorb food from choanocytes, Small fragment or bud may detach and form a new digest it, and carry
    [Show full text]
  • Animal Diversity Part 2
    Textbook resources • pp. 517-522 • pp. 527-8 Animal Diversity • p. 530 part 2 • pp. 531-2 Clicker question In protostomes A. The blastopore becomes the mouth. B. The blastopore becomes the anus. C. Development involves indeterminate cleavage. D. B and C Fig. 25.2 Phylogeny to know (1). Symmetry Critical innovations to insert: Oral bilateral symmetry ecdysis mouth develops after anus multicellularity Aboral tissues 1 Animal diversity, part 2 Parazoa Diversity 2 I. Parazoa • Porifera: Sponges II. Cnidaria & Ctenophora • Tissues • Symmetry I. Outline the • Germ Layers III. Lophotrochozoa unique • Embryonic characteristics Development of sponges IV. Ecdysozoa • Body Cavities • Segmentation Parazoa Parazoa • Porifera: Sponges • Porifera: Sponges – Multicellular without – Hermaphrodites tissues – Sexual and asexual reproduction – Choanocytes (collar cells) use flagella to move water and nutrients into pores – Intracellular digestion Fig. 25.11 Animal diversity, part 2 Clicker Question Diversity 2 I. Parazoa In diploblastic animals, the inner lining of the digestive cavity or tract is derived from II. Cnidaria & Ctenophora A. Endoderm. II. Outline the B. Ectoderm. unique III. Lophotrochozoa C. Mesoderm. characteristics D. Coelom. of cnidarians and IV. Ecdysozoa ctenophores 2 Coral Box jelly Cnidaria and Ctenophora • Cnidarians – Coral; sea anemone; jellyfish; hydra; box jellies • Ctenophores – Comb jellies Sea anemone Jellyfish Hydra Comb jelly Cnidaria and Ctenophora Fig. 25.12 Coral Box jelly Cnidaria and Ctenophora • Tissues Fig. 25.12 –
    [Show full text]
  • BIOL 2290 - 3 EVOLUTION of ANIMAL BODY PLANS (3,0,3) Winter 2020
    BIOL 2290 - 3 EVOLUTION OF ANIMAL BODY PLANS (3,0,3) Winter 2020 Instructor: Dr. Louis Gosselin Office: Research Centre RC203 Email: [email protected] Course website: www.faculty.tru.ca/lgosselin/biol2290/ Meeting times Lectures: Mon 8:30 - 9:45 [AE 162] Wed 8:30 - 9:45 [AE 162] Laboratories - 3 hours per week [S 378] Calendar description This course explores the spectacular diversity of animal body plans, and examines the sequence of events that lead to this diversity. Lectures and laboratories emphasize the inherent link between body form, function and phylogeny. The course also highlights the diverse roles that animals play in natural ecosystems as well as their implications for humans, and examines how knowledge of animal morphology, development, and molecular biology allows us to reconstruct the phylogenetic tree of the Animalia. Educational objectives Upon successful completion of this course, students will be able to identify the major evolutionary events that lead to the current diversity of animal body plans, and the selective pressures that favoured each type of body plan. They will be able to recognize the functional significance of animal body design, relating morphology with specific lifestyles. Students will be able to describe the major functions that animals play in natural ecosystems and the significance of different animals for humans. In addition, students successfully completing the laboratory component of the course will be skilled in dissection techniques, identification, and in the basic design, execution and analysis of a scientific experiment with animals. Prerequisites BIOL1110, BIOL1210 Required texts Ruppert EE, Fox RS, Barnes RD (2004) Invertebrate Zoology.
    [Show full text]
  • FISH310: Biology of Shellfishes
    FISH310: Biology of Shellfishes Lecture Slides #3 Phylogeny and Taxonomy sorting organisms How do we classify animals? Taxonomy: naming Systematics: working out relationships among organisms Classification • All classification schemes are, in part, artificial to impose order (need to start some where using some information) – Cell number: • Acellular, One cell (_________), or More than one cell (metazoa) – Metazoa: multicellular, usu 2N, develop from blastula – Body Symmetry – Developmental Pattern (Embryology) – Evolutionary Relationship Animal Kingdom Eumetazoa: true animals Corals Anemones Parazoa: no tissues Body Symmetry • Radial symmetry • Phyla Cnidaria and Ctenophora • Known as Radiata • Any cut through center ! 2 ~ “mirror” pieces • Bilateral symmetry • Other phyla • Bilateria • Cut longitudinally to achieve mirror halves • Dorsal and ventral sides • Anterior and posterior ends • Cephalization and central nervous system • Left and right sides • Asymmetry uncommon (Porifera) Form and Life Style • The symmetry of an animal generally fits its lifestyle • Sessile or planktonic organisms often have radial symmetry • Highest survival when meet the environment equally well from all sides • Actively moving animals have bilateral symmetry • Head end is usually first to encounter food, danger, and other stimuli Developmental Pattern • Metazoa divided into two groups based on number of germ layers formed during embryogenesis – differs between radiata and bilateria • Diploblastic • Triploblastic Developmental Pattern.. • Radiata are diploblastic: two germ layers • Ectoderm, becomes the outer covering and, in some phyla, the central nervous system • Endoderm lines the developing digestive tube, or archenteron, becomes the lining of the digestive tract and organs derived from it, such as the liver and lungs of vertebrates Diploblastic http://faculty.mccfl.edu/rizkf/OCE1001/Images/cnidaria1.jpg Developmental Pattern….
    [Show full text]
  • Taxonomy and Classification
    Taxonomy and Classification Taxonomy = the science of naming and describing species “Wisdom begins with calling things by their right names” -Chinese Proverb museums contain ~ 2 Billion specimens worldwide about 1.5 M different species of life have been described each year ~ 13,000 new species are described most scientists estimate that there are at least 50 to 100 Million actual species sharing our planet today most will probably remain unknown forever: the most diverse areas of world are the most remote most of the large stuff has been found and described not enough researchers or money to devote to this work Common vs Scientific Name many larger organisms have “common names” but sometimes >1 common name for same organism sometimes same common name used for 2 or more distinctly different organisms eg. daisy eg. moss eg. mouse eg. fern eg. bug Taxonomy and Classification, Ziser Lecture Notes, 2004 1 without a specific (unique) name it’s impossible to communicate about specific organisms What Characteristics are used how do we begin to categorize, classify and name all these organisms there are many ways to classify: form color size chemical structure genetic makeup earliest attempts used general appearance ie anatomy and physiological similarities plants vs animals only largest animals were categorized everything else was “vermes” but algae, protozoa today, much more focus on molecular similarities proteins, DNA, genes History of Classification Aristotle was the first to try to name and classify things based on structural similarities
    [Show full text]
  • Structural Profile of the Pea Or Bean Family
    Florida ECS Quick Tips July 2016 Structural Profile of the Pea or Bean Family The Pea Family (Fabaceae) is the third largest family of flowering plants, with approximately 750 genera and over 19,000 known species. (FYI – the Orchid Family is the largest plant family and the Aster Family ranks second in number of species.) I am sure that you are all familiar with the classic pea flower (left). It, much like the human body, is bilaterally symmetrical and can be split from top to bottom into two mirror-image halves. Botanists use the term zygomorphic when referring to a flower shaped like this that has two different sides. Zygomorphic flowers are different than those of a lily, which are radially symmetrical and can be split into more than two identical sections. (These are called actinomorphic flowers.) Pea flowers are made up of five petals that are of different sizes and shapes (and occasionally different colors as well). The diagram at right shows a peanut (Arachis hypogaea) flower (another member of the Pea Family), that identifies the various flower parts. The large, lobed petal at the top is called the banner or standard. Below the banner are a pair of petals called the wings. And, between the wings, two petals are fused together to form the keel, which covers the male and female parts of the flower. Because of the resemblance to a butterfly, pea flowers are called papilionaceous (from Latin: papilion, a butterfly). However, there is group of species in the Pea Family (a subfamily) with flowers like the pride-of-Barbados or peacock flower (Caesalpinia pulcherrima) shown to the left.
    [Show full text]
  • Plant Nomenclature and Taxonomy an Horticultural and Agronomic Perspective
    3913 P-01 7/22/02 4:25 PM Page 1 1 Plant Nomenclature and Taxonomy An Horticultural and Agronomic Perspective David M. Spooner* Ronald G. van den Berg U.S. Department of Agriculture Biosystematics Group Agricultural Research Service Department of Plant Sciences Vegetable Crops Research Unit Wageningen University Department of Horticulture PO Box 8010 University of Wisconsin 6700 ED Wageningen 1575 Linden Drive The Netherlands Madison Wisconsin 53706-1590 Willem A. Brandenburg Plant Research International Wilbert L. A. Hetterscheid PO Box 16 VKC/NDS 6700 AA, Wageningen Linnaeuslaan 2a The Netherlands 1431 JV Aalsmeer The Netherlands I. INTRODUCTION A. Taxonomy and Systematics B. Wild and Cultivated Plants II. SPECIES CONCEPTS IN WILD PLANTS A. Morphological Species Concepts B. Interbreeding Species Concepts C. Ecological Species Concepts D. Cladistic Species Concepts E. Eclectic Species Concepts F. Nominalistic Species Concepts *The authors thank Paul Berry, Philip Cantino, Vicki Funk, Charles Heiser, Jules Janick, Thomas Lammers, and Jeffrey Strachan for review of parts or all of our paper. Horticultural Reviews, Volume 28, Edited by Jules Janick ISBN 0-471-21542-2 © 2003 John Wiley & Sons, Inc. 1 3913 P-01 7/22/02 4:25 PM Page 2 2 D. SPOONER, W. HETTERSCHEID, R. VAN DEN BERG, AND W. BRANDENBURG III. CLASSIFICATION PHILOSOPHIES IN WILD AND CULTIVATED PLANTS A. Wild Plants B. Cultivated Plants IV. BRIEF HISTORY OF NOMENCLATURE AND CODES V. FUNDAMENTAL DIFFERENCES IN THE CLASSIFICATION AND NOMENCLATURE OF CULTIVATED AND WILD PLANTS A. Ambiguity of the Term Variety B. Culton Versus Taxon C. Open Versus Closed Classifications VI. A COMPARISON OF THE ICBN AND ICNCP A.
    [Show full text]
  • Characterization of the Sandfly Fever Naples Species Complex and Description of a New Karimabad Species Complex
    Journal of General Virology (2014), 95, 292–300 DOI 10.1099/vir.0.056614-0 Short Characterization of the Sandfly fever Naples Communication species complex and description of a new Karimabad species complex (genus Phlebovirus, family Bunyaviridae) Gustavo Palacios,1 Robert B. Tesh,2 Nazir Savji,33 Amelia P. A. Travassos da Rosa,2 Hilda Guzman,2 Ana Valeria Bussetti,3 Aaloki Desai,3 Jason Ladner,1 Maripaz Sanchez-Seco4 and W. Ian Lipkin3 Correspondence 1Center for Genomic Sciences, United States Army Medical Research Institute for Infectious Gustavo Palacios Diseases, Frederick, MD, USA [email protected] 2Center for Biodefense and Emerging Infectious Diseases, Department of Pathology, University of Texas Medical Branch, Galveston, TX, USA 3Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY, USA 4Centro Nacional de Microbiologia, Instituto de Salud ‘Carlos III’, Madrid, Spain Genomic and antigenic characterization of members of the Sandfly fever Naples virus (SFNV) complex reveals the presence of five clades that differ in their geographical distribution. Saint Floris and Gordil viruses, both found in Africa, form one clade; Punique, Granada and Massilia viruses, all isolated in the western Mediterranean, constitute a second; Toscana virus, a third; SFNV isolates from Italy, Cyprus, Egypt and India form a fourth; while Tehran virus and a Serbian isolate Yu 8/76, represent a fifth. Interestingly, this last clade appears not to express the second non-structural protein ORF. Karimabad virus, previously classified as a member of the SFNV complex, and Gabek Forest virus are distinct and form a new species complex (named Karimabad) in the Phlebovirus genus.
    [Show full text]
  • Writing Plant Names
    Writing Plant Names 06-09-2020 Nomenclatural Codes and Resources There are two international codes that govern the use and application of plant nomenclature: 1. The International Code of Nomenclature for Algae, Fungi, and Plants, Shenzhen Code, 2018. International Association for Plant Taxonomy. Abbreviation: ICN • Serves the needs of science by setting precise rules for the application of scientific names to taxonomic groups of algae, fungi, and plants • Available online at https://www.iapt-taxon.org/nomen/main.php 2. The International Code of Nomenclature for Cultivated Plants, 9th Edition, 2016. International Association for Horticultural Science. Abbreviation: ICNCP • Serves the applied disciplines of horticulture, agriculture, and forestry by setting rules for the naming of cultivated plants • Available online at https://www.ishs.org/sites/default/files/static/ScriptaHorticulturae_18.pdf These two resources, while authoritative, are very technical and are not easy to read. Two more accessible references are: 1. Plant Names: A guide to botanical nomenclature, 3rd Edition, 2007. Spencer, R., R. Cross, P. Lumley. CABI Publishing. • Hard copy available for reference in the Overlook Pavilion office 2. The Code Decoded, 2nd Edition, 2019. Turland, N. Advanced Books. • Available online at https://ab.pensoft.net/book/38075/list/9/ This document summarizes the rules presented in the above references and, where presentation is a matter of preference rather than hard-and-fast rules (such as with presentation of common names), establishes preferred presentation for the Arboretum at Penn State. Page | 1 Parts of a Name The diagram below illustrates the overall structure of a plant name. Each component, its variations, and its preferred presentation will be addressed in the sections that follow.
    [Show full text]