Adaptive Traits of Sponges (Porifera: Spongillida): a Review
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Erpenbeck, D., Steiner, M., Schuster, A., Genner, M
Erpenbeck, D., Steiner, M., Schuster, A., Genner, M. J., Pronzato, R., Ruthensteiner, B., van den Spiegel, D., van Soest, R., & Worheide, G. (2019). Minimalist barcodes for sponges: a case study classifying African freshwater Spongillida. Genome, 62(1), 1-10. https://doi.org/10.1139/gen-2018-0098 Peer reviewed version Link to published version (if available): 10.1139/gen-2018-0098 Link to publication record in Explore Bristol Research PDF-document This is the author accepted manuscript (AAM). The final published version (version of record) is available online via Canada Science Publishing at http://www.nrcresearchpress.com/doi/10.1139/gen-2018- 0098#.XEH79s2nyUk . Please refer to any applicable terms of use of the publisher. University of Bristol - Explore Bristol Research General rights This document is made available in accordance with publisher policies. Please cite only the published version using the reference above. Full terms of use are available: http://www.bristol.ac.uk/red/research-policy/pure/user-guides/ebr-terms/ Minimalist barcodes for sponges - A case study classifying African freshwater Spongillida Dirk Erpenbeck1,2,*, Markus Steiner1, Astrid Schuster1, Martin J. Genner3, Renata Manconi4, Roberto Pronzato5, Bernhard Ruthensteiner2,6, Didier van den Spiegel7, Rob W.M. van Soest8, Gert Wörheide1,2,9 1 Department of Earth- & Environmental Sciences, Palaeontology and Geobiology, Ludwig- Maximilians-Universität München, Munich, Germany. 2 GeoBio-CenterLMU, Ludwig-Maximilians-Universität, Munich, Germany. 3 School of Biological Sciences, University of Bristol, Bristol, BS8 1TQ, United Kingdom. 4 Dipartimento di Medicina Veterinaria, Università di Sassari, Sassari, Italy. 5 Dipartimento di Scienze della Terra, dell'Ambiente e della Vita, Università di Genova, Genova, Italy. -
Redalyc.Environmental Factors Related to the Production of a Complex Set of Spicules in a Tropical Freshwater Sponge
Anais da Academia Brasileira de Ciências ISSN: 0001-3765 [email protected] Academia Brasileira de Ciências Brasil MATTEUZZO, MARCELA C.; VOLKMER-RIBEIRO, CECÍLIA; VARAJÃO, ANGÉLICA F.D.C.; VARAJÃO, CÉSAR A.C.; ALEXANDRE, ANNE; GUADAGNIN, DEMETRIO L.; ALMEIDA, ARIANA C.S. Environmental factors related to the production of a complex set of spicules in a tropical freshwater sponge Anais da Academia Brasileira de Ciências, vol. 87, núm. 4, octubre-diciembre, 2015, pp. 2013-2029 Academia Brasileira de Ciências Rio de Janeiro, Brasil Available in: http://www.redalyc.org/articulo.oa?id=32743236010 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative Anais da Academia Brasileira de Ciências (2015) 87(4): 2013-2029 (Annals of the Brazilian Academy of Sciences) Printed version ISSN 0001-3765 / Online version ISSN 1678-2690 http://dx.doi.org/10.1590/0001-3765201520140461 www.scielo.br/aabc Environmental factors related to the production of a complex set of spicules in a tropical freshwater sponge MARCELA C. MatteuZZO1,2, CECÍLIA Volkmer-RIBEIRO3, ANGÉLICA F.D.C. VarajÃO1, CÉSAR A.C. VarajÃO1, ANNE ALEXANDRE2, DEMETRIO L. GUADAGNIN4 and ARIANA C.S. ALMEIDA5 1Departamento de Geologia, Universidade Federal de Ouro Preto, Campus Morro do Cruzeiro, s/n, Bauxita, 35400-000 Ouro Preto, MG, Brasil 2Université Aix-Marseille, CNRS, IRD, CEREGE UM34, Technopôle de l’Arbois- Méditerranée, BP80, 13545 Aix en Provence cedex 4, France 3Museu de Ciências Naturais da Fundação Zoobotânica do Rio Grande do Sul, Rua Dr. -
Freshwater Sponges (Porifera: Spongillida) of Tennessee
Freshwater Sponges (Porifera: Spongillida) of Tennessee Authors: John Copeland, Stan Kunigelis, Jesse Tussing, Tucker Jett, and Chase Rich Source: The American Midland Naturalist, 181(2) : 310-326 Published By: University of Notre Dame URL: https://doi.org/10.1674/0003-0031-181.2.310 BioOne Complete (complete.BioOne.org) is a full-text database of 200 subscribed and open-access titles in the biological, ecological, and environmental sciences published by nonprofit societies, associations, museums, institutions, and presses. Your use of this PDF, the BioOne Complete website, and all posted and associated content indicates your acceptance of BioOne’s Terms of Use, available at www.bioone.org/terms-of-use. Usage of BioOne Complete content is strictly limited to personal, educational, and non-commercial use. Commercial inquiries or rights and permissions requests should be directed to the individual publisher as copyright holder. BioOne sees sustainable scholarly publishing as an inherently collaborative enterprise connecting authors, nonprofit publishers, academic institutions, research libraries, and research funders in the common goal of maximizing access to critical research. Downloaded From: https://bioone.org/journals/The-American-Midland-Naturalist on 18 Sep 2019 Terms of Use: https://bioone.org/terms-of-use Access provided by United States Fish & Wildlife Service National Conservation Training Center Am. Midl. Nat. (2019) 181:310–326 Notes and Discussion Piece Freshwater Sponges (Porifera: Spongillida) of Tennessee ABSTRACT.—Freshwater sponges (Porifera: Spongillida) are an understudied fauna. Many U.S. state and federal conservation agencies lack fundamental information such as species lists and distribution data. Such information is necessary for management of aquatic resources and maintaining biotic diversity. -
Proposal for a Revised Classification of the Demospongiae (Porifera) Christine Morrow1 and Paco Cárdenas2,3*
Morrow and Cárdenas Frontiers in Zoology (2015) 12:7 DOI 10.1186/s12983-015-0099-8 DEBATE Open Access Proposal for a revised classification of the Demospongiae (Porifera) Christine Morrow1 and Paco Cárdenas2,3* Abstract Background: Demospongiae is the largest sponge class including 81% of all living sponges with nearly 7,000 species worldwide. Systema Porifera (2002) was the result of a large international collaboration to update the Demospongiae higher taxa classification, essentially based on morphological data. Since then, an increasing number of molecular phylogenetic studies have considerably shaken this taxonomic framework, with numerous polyphyletic groups revealed or confirmed and new clades discovered. And yet, despite a few taxonomical changes, the overall framework of the Systema Porifera classification still stands and is used as it is by the scientific community. This has led to a widening phylogeny/classification gap which creates biases and inconsistencies for the many end-users of this classification and ultimately impedes our understanding of today’s marine ecosystems and evolutionary processes. In an attempt to bridge this phylogeny/classification gap, we propose to officially revise the higher taxa Demospongiae classification. Discussion: We propose a revision of the Demospongiae higher taxa classification, essentially based on molecular data of the last ten years. We recommend the use of three subclasses: Verongimorpha, Keratosa and Heteroscleromorpha. We retain seven (Agelasida, Chondrosiida, Dendroceratida, Dictyoceratida, Haplosclerida, Poecilosclerida, Verongiida) of the 13 orders from Systema Porifera. We recommend the abandonment of five order names (Hadromerida, Halichondrida, Halisarcida, lithistids, Verticillitida) and resurrect or upgrade six order names (Axinellida, Merliida, Spongillida, Sphaerocladina, Suberitida, Tetractinellida). Finally, we create seven new orders (Bubarida, Desmacellida, Polymastiida, Scopalinida, Clionaida, Tethyida, Trachycladida). -
Freshwater Sponge Hosts and Their Green Algae Symbionts
bioRxiv preprint doi: https://doi.org/10.1101/2020.08.12.247908; this version posted August 13, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Freshwater sponge hosts and their green algae 2 symbionts: a tractable model to understand intracellular 3 symbiosis 4 5 Chelsea Hall2,3, Sara Camilli3,4, Henry Dwaah2, Benjamin Kornegay2, Christine A. Lacy2, 6 Malcolm S. Hill1,2§, April L. Hill1,2§ 7 8 1Department of Biology, Bates College, Lewiston ME, USA 9 2Department of Biology, University of Richmond, Richmond VA, USA 10 3University of Virginia, Charlottesville, VA, USA 11 4Princeton University, Princeton, NJ, USA 12 13 §Present address: Department of Biology, Bates College, Lewiston ME USA 14 Corresponding author: 15 April L. Hill 16 44 Campus Ave, Lewiston, ME 04240, USA 17 Email address: [email protected] 18 19 20 21 22 23 24 25 26 bioRxiv preprint doi: https://doi.org/10.1101/2020.08.12.247908; this version posted August 13, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 27 Abstract 28 In many freshwater habitats, green algae form intracellular symbioses with a variety of 29 heterotrophic host taxa including several species of freshwater sponge. These sponges perform 30 important ecological roles in their habitats, and the poriferan:green algae partnerships offers 31 unique opportunities to study the evolutionary origins and ecological persistence of 32 endosymbioses. -
Freshwater Adaptation at the Molecular Scale in the Unique Sponges of Lake Baikal
bioRxiv preprint doi: https://doi.org/10.1101/416230; this version posted March 27, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Article: Discoveries Freshwater Adaptation at the Molecular Scale in the Unique Sponges of Lake Baikal Nathan J Kenny1 [email protected] Bruna Plese1,2 [email protected] Ana Riesgo1* [email protected] Valeria B. Itskovich3* [email protected] 1 Life Sciences Department, The Natural History Museum, Cromwell Road, London SW7 5BD, UK 2 Division of Molecular Biology, Ruđer Bošković Institute, Bijenička cesta 54, 10000, Zagreb, Croatia 3 Limnological Institute, Siberian Branch of the Russian Academy of Science, Ulan-Batorskaya, 3, Irkutsk, 664033 Russia 1 bioRxiv preprint doi: https://doi.org/10.1101/416230; this version posted March 27, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Abstract: The Lake Baikal ecosystem is unique. The largest, oldest and deepest lake in the world presents a variety of rare evolutionary opportunities and ecological niches to the species that inhabit it, and as a result the lake is a biodiversity hotspot. More than 80% of the animals found there are endemic, and they often exhibit unusual traits. The freshwater sponge Lubomirskia baicalensis and its relatives are good examples of these idiosyncratic organisms. -
Miscellaneous Publication Occasional Paper No. 4 RECORDS of the ZOOLOGICAL SURVEY of INDIA
Miscellaneous Publication Occasional Paper No. 4 RECORDS OF THE ZOOLOGICAL SURVEY OF INDIA MISCELLANEOUS PUBLICATION OCCASIONAL PAPER No. 4 Checklist of Indian Freshwater Sponges, with a .Catalogue of Type-Specimens in the Collection of the Zoological Survey of India (Porifera: Spongillidae) BY s. KHERA and Y. CHATURVEDI I.. - . Edited by the Director, Zoological Survey qf India 1976 PRICE: Inland: Rs. 6.00 Foreign: {, 0.40 or $ 0.70 PRINTED IN INDIA AT AMRA PRESS, MADRAS - 600 041 AND PUBLISHED BY TliE MANAGER OF PUBLICATIONS, CIVIL LINES, DELHI - 110 006. INTRODUCTION Annandale (1911) in his volume in the Fauna of British India series on Freshwater Sponges, Hydroids and Polyzoa described 35 species, subspecies and varieties under seven genera of Spongillidae from what Was then the British India and from yeylon (now Sri Lanka) and Burma. He also recog nised three subgenera under the genus Spongilla. Later on (up to 1919) he described a few more species. After Annandale very little work has been done on Indian Spongillidae. Penney and Racek (1968), while making a revision of the freshwater sponges of the world, synonymised many Indian species, subspecies and varieties reported/described by Annandale. This checklist is based on the present status of the different taxa. This tentative list has been prepared to consolidate our knowledge of the freshwater sponges within Indian political boundaries and also with the idea that this may serve as a prelude to a revised volume in the Fauna of India series. It may, however, be stated that many areas of the country have yet to be surveyed for their spongillid fauna. -
Order to Further Assess the Parameters Responsible of The
Matteuzzo et al. manuscript “Assessing the relationship between the d18O signatures of siliceous sponge spicules and water in a tropical lacustrine environment (Minas Gerais, Brazil)” Supplementary material : Point by point answers to comments from Anonymous Referee #1 and corrected draft (with modified section in blue). General comments Corrected d18Osilica values: This is my first concern for this study. It seems that the applied correction functions are partly reliable for the shown trends (cf. Table 1, column d18Osilica vs. corrected d18Osilica measured). As most of the result and the discussion section is based on thevalues from corrected d18Osilica measured and as this method of corrections has large uncertainties the results are questionable (see comments for the sections “Methods” and “Results”). At least the uncertainties should be mentioned and the theoretic results for the uncorrected data should be discussed and if they provide a similar picture. This correction was previously discussed in Chapligin et al., 2011 and Alexandre et al., 2012. Although this methodological bias remained unexplained, it is reproducible and could thus be quantified. As pointed out by referee #1, this correction can lead to large uncertainties (Chapligin et al., 2011), although its consistency was verified on independent datasets (Alexandre et al., 2012). In the present case, the simulated uncertainty (calculated using Monte 18 Carlo simulation with the R software) on final corrected δ Osilica values ranges from 0.5 and 0.8 ‰ (cf Table 1 of the corrected draft). 18 18 18 Moreover corrected δ Osilica values are linearly correlated with measured δ Osilica values (corrected δ Osilica 18 2 =1.006 * measured δ Osilica -2.96; r =0.96). -
Spiculous Skeleton Formation in the Freshwater Sponge Ephydatia fluviatilis Under Hypergravity Conditions
Spiculous skeleton formation in the freshwater sponge Ephydatia fluviatilis under hypergravity conditions Martijn C. Bart1, Sebastiaan J. de Vet2,3, Didier M. de Bakker4, Brittany E. Alexander1, Dick van Oevelen5, E. Emiel van Loon6, Jack J.W.A. van Loon7 and Jasper M. de Goeij1 1 Department of Freshwater and Marine Ecology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Amsterdam, The Netherlands 2 Earth Surface Science, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Amsterdam, The Netherlands 3 Taxonomy & Systematics, Naturalis Biodiversity Center, Leiden, The Netherlands 4 Microbiology & Biogeochemistry, NIOZ Royal Netherlands Institute for Sea Research & Utrecht University, Utrecht, The Netherlands 5 Department of Estuarine and Delta Systems, NIOZ Royal Netherlands Institute for Sea Research & Utrecht University, Utrecht, The Netherlands 6 Department of Computational Geo-Ecology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Amsterdam, The Netherlands 7 Dutch Experiment Support Center, Department of Oral and Maxillofacial Surgery/Oral Pathology, VU University Medical Center & Academic Centre for Dentistry Amsterdam (ACTA) & European Space Agency Technology Center (ESA-ESTEC), TEC-MMG LIS Lab, Noordwijk, Amsterdam, The Netherlands ABSTRACT Successful dispersal of freshwater sponges depends on the formation of dormant sponge bodies (gemmules) under adverse conditions. Gemmule formation allows the sponge to overcome critical environmental conditions, for example, desiccation or freezing, and to re-establish as a fully developed sponge when conditions are more favorable. A key process in sponge development from hatched gemmules is the construction of the silica skeleton. Silica spicules form the structural support for the three-dimensional filtration system the sponge uses to filter food particles from Submitted 30 August 2018 ambient water. -
Formation of Spicules During the Long-Term Cultivation of Primmorphs from the Freshwater Baikal Sponge Lubomirskia Baikalensis L.I
ry: C ist urr m en e t h R C Chernogor et al. Organic Chem Current Res 2011, S:2 e c s i e n a DOI: 10.4172/2161-0401.S2-001 a r c g r h O Organic Chemistry ISSN: 2161-0401 Current Research ResearchResearch Article Article OpenOpen Access Access Formation of Spicules During the Long-term Cultivation of Primmorphs from the Freshwater Baikal Sponge Lubomirskia baikalensis L.I. Chernogor1*, N.N. Denikina1, S.I. Belikov1 and A.V. Ereskovsky2,3 1Limnological Institute of the Siberian Branch of the Russian Academy of Sciences, Ulan-Batorskaya 3, Irkutsk 664033, Russia 2Department of Embryology, Faculty of Biology and Soils, Saint-Petersburg State University, Universitetskaja nab. 7/9, St. Petersburg 199034, Russia 3Centre d’Océanologie de Marseille, Station marine d’Endoume - CNRS UMR 6540-DIMAR, rue de la Batterie des Lions, 13007 Marseille, France Abstract Sponges (phylum Porifera) are phylogenetically ancient Metazoa that use silicon to form their skeletons. The process of biomineralization in sponges is one of the important problems being examined in the field of research focused on sponge biology. Primmorph cell culture is a convenient model for studying spiculogenesis. The aim of the present work was to produce a long-term primmorph culture from the freshwater Baikal sponge Lubomirskia baikalensis (class Demospongiae, order Haplosclerida and family Lubomirskiidae) in both natural Baikal water and artificial Baikal water to study the influence of silicate concentration on formation and growth of spicules in primmorphs. Silicate concentration plays an important role in formation and growth of spicules, as well as overabundance of silica leads to destruction of cell culture primmorphs. -
E Edulis ATION TRENDS and GAPS in SCIENTIFIC PRODUCTION ON
Oecologia Australis 24(1):61-75, 2020 https://doi.org/10.4257/oeco.2020.2401.05 GEOGRAPHIC DISTRIBUTION OF THE THREATENED PALM Euterpe edulis Mart. IN THE ATLANTIC FOREST: IMPLICATIONS FOR CONSERVATION TRENDS AND GAPS IN SCIENTIFIC production ON FRESHWater SPONGES Aline Cavalcante de Souza1* & Jayme Augusto Prevedello1 Marcelo Rodrigues Freitas de Oliveira1, Cintia da Costa2 & Evanilde Benedito*3 1 1 Universidade do Estado do Rio de Janeiro, Instituto de Biologia, Departamento de Ecologia, Laboratório de Ecologia de Universidade Estadual de Maringá, Programa de Pós-Graduação em Biologia Comparada, Avenida Colombo, 5790, Paisagens, Rua São Francisco Xavier 524, Maracanã, CEP 20550-900, Rio de Janeiro, RJ, Brazil. Bloco G-80, Sala 201, CEP: 87020-900, Maringá, Paraná, Brazil. 2 E-mails: [email protected] (*corresponding author); [email protected] Universidade Estadual de Maringá, Departamento de Biologia, Avenida Colombo, 5790, Bloco G-80, Sala 201, CEP: 87020-900, Maringá, Paraná, Brazil. Abstract: The combination of species distribution models based on climatic variables, with spatially explicit 3 Núcleo de Pesquisa em Limnologia, Ictiologia e Aquicultura (Nupélia) /PEA/PGB, Universidade Estadual de Maringá analyses of habitat loss, may produce valuable assessments of current species distribution in highly disturbed (UEM), Avenida Colombo, 5790, Bloco H-90, CEP: 87020-900, Maringá, Paraná, Brazil ecosystems. Here, we estimated the potential geographic distribution of the threatened palm Euterpe Emails: [email protected], [email protected], [email protected] (*corresponding author). edulis Mart. (Arecaceae), an ecologically and economically important species inhabiting the Atlantic Forest biodiversity hotspot. This palm is shade-tolerant, and its populations are restricted to the interior of forest Abstract: Researchers working with freshwater sponges are faced with old, unresolved issues and fragmented patches. -
Louisiana Freshwater Sponges: Taxonomy, Ecology and Distribution
Louisiana State University LSU Digital Commons LSU Historical Dissertations and Theses Graduate School 1969 Louisiana Freshwater Sponges: Taxonomy, Ecology and Distribution. Michael Anthony Poirrier Louisiana State University and Agricultural & Mechanical College Follow this and additional works at: https://digitalcommons.lsu.edu/gradschool_disstheses Recommended Citation Poirrier, Michael Anthony, "Louisiana Freshwater Sponges: Taxonomy, Ecology and Distribution." (1969). LSU Historical Dissertations and Theses. 1683. https://digitalcommons.lsu.edu/gradschool_disstheses/1683 This Dissertation is brought to you for free and open access by the Graduate School at LSU Digital Commons. It has been accepted for inclusion in LSU Historical Dissertations and Theses by an authorized administrator of LSU Digital Commons. For more information, please contact [email protected]. This dissertation has been microfilmed exactly as received 70-9083 POIRMER, Michael Anthony, 1942- LOUISIANA FRESH-WATER SPONGES: TAXONOMY, ECOLOGY AND DISTRIBUTION. The Louisiana State University and Agricultural and Mechanical College, Ph.D., 1969 Zoology University Microfilms, Inc., Ann Arbor, Michigan Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. This dissertation has been microfilmed exactly as received 70-9083 POIRRIER, Michael Anthony, 1942- LOUXSIANA FRESH-WATER SPONGES: TAXONOMY, ECOLOGY AND DISTRIBUTION. The Louisiana State University and Agricultural and Mechanical College, Ph.D., 1969 Zoology University Microfilms,