WRN Protein and Werner Syndrome

Total Page:16

File Type:pdf, Size:1020Kb

WRN Protein and Werner Syndrome North American Journal of Medicine and Science Oct 2010 Vol 3 No.4 205 Commentary WRN Protein and Werner Syndrome Jianyuan Luo, PhD metabolism, genomic instability, and senescence. Werner Abstract syndrome cells show hypersensitivity to selected DNA- Werner syndrome is an autosomal recessive disorder damaging agents including 4-nitroquinoline-1-oxide associated with premature aging and cancer (4NQO),11 topoisomerase inhibitors,12 and certain DNA predisposition. Cells from Werner syndrome patients cross-linking agents.13 Comparing with normal cells, Werner show increased genomic instability and are hypersensitive syndrome cells also exhibit increased genomic instability to DNA damage agents. Werner syndrome is caused by including higher levels of DNA deletions, translocations, and mutations of the WRN gene. WRN protein is a member of chromosomal breaks.14,15 These studies suggest that WRN RecQ DNA helicase family. It not only contains a plays an important role in DNA repair, replication, and conserved 3’-5’ helicase domain as other members of the recombination pathways. RecQ family but also contains a unique 3’-5’ exonuclease domain. WRN recognizes specific DNA structures as Werner Syndrome Mouse Model substrates which are intermediates of DNA metabolism. Two knockout mouse models for Werner syndrome have WRN interacts with many other proteins, which function been established by using different strategies, and displayed a in telomere maintenance, DNA replication, and DNA distinct phenotype. Lebel and Leder targeted the exons that repair through different pathways. encode motifs III and IV of the helicase domain of mouse [N A J Med Sci. 2010;3(4):205-207.] WRN. The targeted gene expresses a fully translated WRN protein that lacks 121 amino acids of the helicase domain. Therefore, it is expected that it lacks helicase activity but Werner Syndrome and its Cellular Phenotype retains other putative functions of the WRN protein. The Werner syndrome is a human autosomal recessive disorder homozygous mice were born viable, and during the first year, that displays symptoms of premature aging, including early the mice appeared normal. By 24 months, 62% of the graying and thinning of hair, wrinkling and ulceration of homozygous mice had developed some kind of hyperplasia skin, atherosclerosis, osteoporosis, and cataracts. In addition, or tumor.12 WRN∆hel/∆hel p53−/− double-knockout mice were Werner syndrome patients exhibit an increased incidence of shown to develop tumors more rapidly than the p53−/− diabetes mellitus type 2, hypertension, and are highly parental line. Indeed, by 4–5 months, 50% of the double- disposed to the emergence of benign and malignant knockout population had developed tumors.16 The other 1 neoplasms. Werner syndrome caused by mutation of the knockout mouse, generated by Lombard and co-workers,17 2 WRN gene, a member of the RecQ DNA helicase family. targeted the last exon of the helicase domain, which results in 3 There are five known human RecQ helicases. Mutations in the expression of a truncated protein, a situation similar to two other family members, BLM and RecQ4, are responsible that seen in most human Werner syndrome cases. Moreover, 4 for the two other premature aging syndromes, Bloom’s and as is seen with many of the WS mutations in humans, these 5 Rothmund Thomson, respectively. The WRN gene encodes a authors could not detect expression of the truncated protein. 2 1,432-amino acid protein that contains both 3’→5’ helicase This mouse allele, therefore, can be considered as WRN−.17 6-9 and 3’→5’ exonuclease activities. The WRN−/− homozygous mutant mice were reported to be perfectly healthy. Also, WRN−/− embryonic fibroblasts from The cells from patients with Werner syndrome show these animals showed no signs of sensitivity to 4NQO or premature replicative senescence compared with cells 10 camptothecin, and there was no significant decrease in the derived from normal individuals. The Werner syndrome replicative lifespan of these fibroblasts. However, p53−/− cellular phenotype suggests correlations among faulty DNA WRN−/− double-knockout mice died earlier, and the lack of −/− −/+ p53 accelerated the mortality of WRN or WRN mice. −/− Received 10/14/2010; Revised 10/23/2010; Accepted 10/24/2010 The lack of an obvious phenotype in this WRN mice might be explained by the fact that telomerase is expressed Jianyuan Luo, PhD constitutively in rodent cells, effectively masking any effect Department of Medical & Research Technology of a loss of WRN function.17 The finding of the mice with Department of Pathology WRN and Terc double knock out exhibiting the typical School of Medicine, University of Maryland Werner syndrome phenotype indicates that WRN regulating AHB 405A, 100 Penn Street, Baltimore, MD 21201 telomere function.18,19 [email protected] 206 Oct 2010 Vol 3 No.4 North American Journal of Medicine and Science Biochemical Characteristics of the WRN aphidicolin, 4NQO, etoposide or camptothecin, WRN 26,30,35-37 Protein migrates from nucleoli to discrete nuclear foci. The The lack of phenotypes of WRN knockout mice underscores fact that DNA damage also induces the formation of RPA and RAD51 foci, and these co-localize with WRN almost the need to study human WRN functions at biochemical and 37 cellular level. WRN is a bipartite and bifunctional enzyme. In fully (RPA), or partially (RAD51), emphasizes the potential addition to the ATP-dependent 3’→5’ helicase and DNA- role of the WRN protein in DNA replication and DNA repair. dependent ATPase activities, it also possesses a functional 3’→5’ exonuclease domain, which is similar to the Conclusion Mark exonuclease domain of E. coli DNA polymerase I.20 The two The increasing number of WRN interacting proteins enzymatic functions are separable from each other. The involving DNA replication, recombination and repair provide mutation WRND82A and E84A, disables exonuclease the strong evidence that WRN functions in multiple DNA activity, but retains its helicase activity.7 Similarly, the metabolic processes. WRN participates in several DNA ATPase and helicase activities are diminished when the repair pathways including double strand break repair for both Lys577 residue in the ATPase domain is mutated, but the homologous recombination (HR) and non-homologous end- exonuclease activity is not affected by this substitution.7,21 joining (NHEJ) pathways and base excision repair (BER) The helicase and exonuclease activities are physically pathway. While it may not be essential in any individual separable, recombinant N-terminal fragments WRN1–368,22 process, WRN appears to have significant functional roles in and the minimal exonuclease domain WRN70–24023 display these pathways. WRN resolves DNA intermediates that arise exonuclease activity without helicase activity. Similarly, N normally as a result of DNA repair and replication processes. terminal deletion derivatives, which lack the exonuclease However, the precise role of WRN protein in these processes domain, retain helicase activity. Although the two enzymatic still remains unclear. How the mutations of WRN protein activities are not affect each other, full function and contribute to the plethora of premature aging symptoms in regulation of catalytic activities require the presence of other Werner Syndrome is yet to be ascertained. Further study to regions of the protein, which could modify the activity of the address these important questions should lead to new insights minimal enzymatic domains.24 regarding aging process. The helicase activity of WRN shows very poor processivity References as it preferentially unwound bubble substrates, forked 1. Martin GM, Austad SN, Johnson TE. Genetic analysis of ageing: role 25 of oxidative damage and environmental stresses. Nat Genet. 1996; structures and G-quadruplex DNA. WRN was also capable 13(1):25-34. of branch-migrating Holliday junctions over distances as 2. Yu CE, Oshima J, Fu YH, et al. Positional cloning of the Werner's great as 2.7 kb.26 The 3’→5’ exonuclease activity also syndrome gene. Science 1996; 272(5259):258-262. displays low processivity. Exonucleolytic cleavage results in 3. Hickson ID. RecQ helicases: caretakers of the genome. Nat Rev 8 Cancer. 2003;3(3):169-178. the production of 5’-deoxymonophosphates. It prefers 5’ 4. Ellis NA, Groden J, Ye TZ, et al. The Bloom's syndrome gene product overhangs, bubbles, loops and Holliday junctions structures, is homologous to RecQ helicases. Cell. 1995;83(4):655-666. but has little or no activity on double-stranded duplexes with 5. Kitao S, Shimamoto A, Goto M, et al. Mutations in RECQL4 cause a blunt ends, partial duplexes with 3’ overhangs, or single- subset of cases of Rothmund-Thomson syndrome. Nat Genet. 24 1999;22(1):82-84. strand DNA. 6. Gray MD, Shen JC, Kamath-Loeb AS, et al. The Werner syndrome protein is a DNA helicase. Nat Genet. 1997;17(1):100-103. Functions of WRN Protein and its Subcellular 7. Huang S, Li B, Gray MD, Oshima J, Mian IS, Campisi J. The premature ageing syndrome protein, WRN, is a 3’→5’ exonuclease. Localization Nat Genet. 1998;20(2):114-116. The multi-functional nature of WRN, as well as the range of 8. Kamath-Loeb AS, Shen JC, Loeb LA, Fry M. Werner syndrome different symptoms seen in Werner syndrome patients, protein: II. Characterization of the integral 3’→5’ DNA exonuclease. J Biol Chem. 1998;273(51):34145-34150. suggests that WRN may be a versatile enzyme with an 9. Orren DK, Brosh RM Jr, Nehlin JO, Machwe A, Gray MD, Bohr VA. involvement in diverse cellular processes. The finding that Enzymatic and DNA binding properties of purified WRN protein: high WRN interacts physically and functionally with other affinity binding to single-stranded DNA but not to DNA damage proteins required for DNA metabolism supports this notion. induced by 4NQO. Nucleic Acids Res. 1999;27(17):3557-3566. 10. Martin GM, Sprague CA, Epstein CJ. Replicative life-span of WRN was found to interact directly with numerous proteins, cultivated human cells.
Recommended publications
  • Structure and Function of the Human Recq DNA Helicases
    Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2005 Structure and function of the human RecQ DNA helicases Garcia, P L Posted at the Zurich Open Repository and Archive, University of Zurich ZORA URL: https://doi.org/10.5167/uzh-34420 Dissertation Published Version Originally published at: Garcia, P L. Structure and function of the human RecQ DNA helicases. 2005, University of Zurich, Faculty of Science. Structure and Function of the Human RecQ DNA Helicases Dissertation zur Erlangung der naturwissenschaftlichen Doktorw¨urde (Dr. sc. nat.) vorgelegt der Mathematisch-naturwissenschaftlichen Fakultat¨ der Universitat¨ Z ¨urich von Patrick L. Garcia aus Unterseen BE Promotionskomitee Prof. Dr. Josef Jiricny (Vorsitz) Prof. Dr. Ulrich H ¨ubscher Dr. Pavel Janscak (Leitung der Dissertation) Z ¨urich, 2005 For my parents ii Summary The RecQ DNA helicases are highly conserved from bacteria to man and are required for the maintenance of genomic stability. All unicellular organisms contain a single RecQ helicase, whereas the number of RecQ homologues in higher organisms can vary. Mu- tations in the genes encoding three of the five human members of the RecQ family give rise to autosomal recessive disorders called Bloom syndrome, Werner syndrome and Rothmund-Thomson syndrome. These diseases manifest commonly with genomic in- stability and a high predisposition to cancer. However, the genetic alterations vary as well as the types of tumours in these syndromes. Furthermore, distinct clinical features are observed, like short stature and immunodeficiency in Bloom syndrome patients or premature ageing in Werner Syndrome patients. Also, the biochemical features of the human RecQ-like DNA helicases are diverse, pointing to different roles in the mainte- nance of genomic stability.
    [Show full text]
  • Curriculum Vitae
    CURRICULUM VITAE NAME: Patricia Lynn Opresko BUSINESS ADDRESS: University of Pittsburgh Graduate School of Public Health Department of Environmental and UPMC Hillman Cancer Center 5117 Centre Avenue, Suite 2.6a Pittsburgh, PA15213-1863 Phone: 412-623-7764 Fax: 412-623-7761 E-mail: [email protected] EDUCATION AND TRAINING Undergraduate 1990 - 1994 DeSales University B.S., 1994 Chemistry and Center Valley, PA Biology Graduate 1994 - 2000 Pennsylvania State Ph.D., 2000 Biochemistry and University, College of Molecular Biology Medicine, Hershey, PA Post-Graduate 3/2000 - 5/2000 Pennsylvania State Postdoctoral Dr. Kristin Eckert, University, College of Fellow Mutagenesis and Medicine, Jake Gittlen Cancer etiology Cancer Research Institute Hershey, PA 2000-2005 National Institute on IRTA Postdoctoral Dr. Vilhelm Bohr Aging, National Fellow Molecular Institutes of Health, Gerontology and Baltimore, MD DNA Repair 1 APPOINTMENTS AND POSITIONS Academic 8/1/2018 – Co-leader Genome Stability Program, UPMC present Hillman Cancer Center 5/1/2018- Tenured Professor Pharmacology and Chemical Biology, present School of Medicine, University of Pittsburgh, Pittsburgh, PA 2/1/2018- Tenured Professor Environmental and Occupational Health, present Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA 2014 – Tenured Associate Environmental and Occupational Health, 1/31/2018 Professor Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA 2005 - 2014 Assistant Professor Environmental and Occupational Health, Graduate School
    [Show full text]
  • Neurodegeneration in Accelerated Aging
    DOCTOR OF MEDICAL SCIENCE DANISH MEDICAL JOURNAL Neurodegeneration in Accelerated Aging Morten Scheibye-Knudsen This review has been accepted as a thesis together with 7 previously published pa- pers by the University of Copenhagen, October 16, 2014 and defended on January 14, 2016 Official opponents: Alexander Bürkle, University of Konstanz Lars Eide, University of Oslo Correspondence: Center for Healthy Aging, Department of Cellular and Molecular Medicine, Faculty of Health and Medical Sciences, University of Copenhagen E-mail: [email protected] Dan Med J 2016;63(11):B5308 INTRODUCTION The global elderly population has been progressively increasing throughout the 20th century and this growth is projected to per- sist into the late 21st century resulting in 20% of the total world population being aged 65 or more by the year 2100 (Figure 1). 80% of the total cost of health care is accrued after 40 years of Figure 2. The phenotype of human aging. age where chronic diseases become prevalent [1, 2]. With an ex- that appear to regulate the aging process [4,5]. These include the ponential increase in health care costs, it follows that the chronic insulin and IGF-1 signaling cascades [4], protein synthesis and diseases that accumulate in an aging population poses a serious quality control [6], regulation of cell proliferation through factors socioeconomic problem. Finding treatments to age related dis- such as mTOR [7], stem cell maintenance 8 as well as mitochon- eases, therefore becomes increasingly more pertinent as the pop- drial preservation [9]. Most of these pathways are conserved ulation ages. Even more so since there appears to be a continu- through evolution and appear to regulate aging in many lower or- ous increase in the prevalence of chronic diseases in the aging ganisms.
    [Show full text]
  • Werner Syndrome Protein Participates in a Complex with RAD51, RAD54
    Erratum Werner syndrome protein participates in a complex with RAD51, RAD54, RAD54B and ATR in response to ICL-induced replication arrest Marit Otterlei, Per Bruheim, Byungchan Ahn, Wendy Bussen, Parimal Karmakar, Kathy Baynton and Vilhelm A. Bohr Journal of Cell Science 119, 5215 (2006) doi:10.1242/jcs.03359 There was an error in the first e-press version of the article published in J. Cell Sci. 119, 5137-5146. The first e-press version of this article gave the page range as 5114-5123, whereas it should have been 5137-5146. We apologise for this mistake. Research Article 5137 Werner syndrome protein participates in a complex with RAD51, RAD54, RAD54B and ATR in response to ICL-induced replication arrest Marit Otterlei1,2,*, Per Bruheim1,3,§, Byungchan Ahn1,4,§, Wendy Bussen5, Parimal Karmakar1,6, Kathy Baynton7 and Vilhelm A. Bohr1 1Laboratory of Molecular Gerontology, National Institute on Aging, NIH, 5600 Nathan Shock Dr., Baltimore, MD 21224, USA 2Department of Cancer Research and Molecular Medicine, Laboratory Centre, Faculty of Medicine, Norwegian University of Science and Technology, Erling Skjalgsons gt. 1, N-7006 Trondheim, Norway 3Department of Biotechnology, Norwegian University of Science and Technology, N-7491 Trondheim, Norway 4Department of Life Sciences, University of Ulsan, Ulsan 680-749, Korea 5Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, 333 Cedar St, SHM-C130, New Haven, CT 06515, USA 6Department of Life Science and Biotechnology, Jadavpur University, Kolkata-700 032, WB,
    [Show full text]
  • Human DNA Repair Genes Relatively Late-Diverging, Major Eukaryotic Taxa Whose Exact Order of Radiation Is Difficult to Deter- Richard D
    A NALYSIS OF G ENOMIC I NFORMATION likely GTPases, as indicated by the activity of CIITA 27. L. Aravind, H. Watanabe, D. J. Lipman, E. V. Koonin, of the Integrated Protein Index and A. Uren for critical and HET-E [E. V. Koonin, L. Aravind, Trends Biochem. Proc. Natl. Acad. Sci. U.S.A. 97, 11319 (2000). reading of the manuscript and useful comments. The Sci. 25, 223 (2000)]. 28. J. R. Brown, W. F. Doolittle, Microbiol. Mol. Biol. Rev. release of the unpublished WormPep data set by The 14. T. L. Beattie, W. Zhou, M. O. Robinson, L. Harrington, 61, 456 (1997). Sanger Center is acknowledged and greatly appreciated. Curr. Biol. 8, 177 (1998). 29. We thank E. Birney and A. Bateman (The Sanger Center, 15. E. Diez, Z. Yaraghi, A. MacKenzie, P. Gros, J. Immunol. Hinxton, UK) for kindly providing the preliminary version 25 October 2000; accepted 18 January 2001 164, 1470 (2000). 16. A. M. Verhagen et al., Cell 102, 43 (2000). 17. L. Goyal, K. McCall, J. Agapite, E. Hartwieg, H. Steller, EMBO J. 19, 589 (2000). 18. The eukaryotic crown group is the assemblage of Human DNA Repair Genes relatively late-diverging, major eukaryotic taxa whose exact order of radiation is difficult to deter- Richard D. Wood,1* Michael Mitchell,2 John Sgouros,2 mine with confidence. The crown group includes the 1 multicellular eukaryotes (animals, fungi, and plants) Tomas Lindahl and some unicellular eukaryotic lineages such as slime molds and Acanthamoebae [A. H. Knoll, Science 256, 622 (1992); S. Kumar, A. Rzhetsky, J. Mol.
    [Show full text]
  • University of Cincinnati
    UNIVERSITY OF CINCINNATI _____________ , 20 _____ I,______________________________________________, hereby submit this as part of the requirements for the degree of: ________________________________________________ in: ________________________________________________ It is entitled: ________________________________________________ ________________________________________________ ________________________________________________ ________________________________________________ Approved by: ________________________ ________________________ ________________________ ________________________ ________________________ BLM is a Suppressor of DNA Recombination A dissertation submitted to the Division of Research and Advanced Studies Of the University of Cincinnati In partial fulfillment of the Requirements for the degree of Doctorate of Philosophy (Ph.D.) In the Department of Molecular Genetics, Microbiology, and Biochemistry Of the College of Arts and Sciences 2002 by Joel E. Straughen B.S., The Ohio State University, 1985 M.D., University of Cincinnati, 2002 Committee Chair: Joanna Groden, Ph.D. i ABSTRACT Bloom’s syndrome (BS) is a rare, recessive chromosome breakage disorder characterized by small stature, sun sensitivity, facial erythema, immunodeficiency, female subfertility, male infertility, and a predisposition to a variety of cancers. When this body of work was started, the gene for Bloom’s syndrome (BLM)hadyettobe identified. This work presents characterization of the genomic region at BLM and the identification of BLM. With the cloning
    [Show full text]
  • The Werner Syndrome Protein Is Distinguished from the Bloom Syndrome Protein by Its Capacity to Tightly Bind Diverse DNA Structures
    The Werner Syndrome Protein Is Distinguished from the Bloom Syndrome Protein by Its Capacity to Tightly Bind Diverse DNA Structures Ashwini Kamath-Loeb1, Lawrence A. Loeb1, Michael Fry2* 1 Department of Pathology, The Gottstein Memorial Cancer Research Center, University of Washington, Seattle, Washington, United States of America, 2 Department of Biochemistry, Rappaport Faculty of Medicine, Technion - Israel Institute of Technology, Haifa, Israel Abstract Loss of Werner syndrome helicase-exonuclease (WRN) or of its homolog Bloom syndrome helicase (BLM) results in different inherited disorders. Whereas Werner syndrome is characterized by premature onset of aging and age-associated diseases, Bloom syndrome involves developmental abnormalities and increased predisposition to diverse malignancies. To identify biochemical differences between WRN and BLM that might contribute to the dissimilar outcomes of their loss, we compared their abilities to unwind and bind in vitro diverse DNA structures. Full-length recombinant WRN and BLM proteins expressed in and purified from Sf9 insect cells unwound to comparable extents and with similar Km values partial DNA duplex, splayed arm DNA and G’2 bimolecular quadruplex DNA. However, WRN resolved bubble DNA ,25-fold more efficiently than BLM. The two enzymes were mainly distinguished by their contrasting abilities to bind DNA. WRN bound partial duplexes, bubble and splayed arm DNA and G’2 bimolecular and G4 four-molecular quadruplexes with dissociation constants of 0.25 to 25 nM. By contrast, BLM formed substantial complexes with only G4 quadruplex DNA while binding only marginally other DNA structures. We raise the possibility that in addition to its enzymatic activities WRN may act as a scaffold for the assembly on DNA of additional DNA processing proteins.
    [Show full text]
  • Crystal Structure of the Werner's Syndrome Helicase
    bioRxiv preprint doi: https://doi.org/10.1101/2020.05.04.075176; this version posted May 5, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-ND 4.0 International license. Crystal Structure of the Werner’s Syndrome Helicase Joseph A. Newman1, Angeline E. Gavard1, Simone Lieb2, Madhwesh C. Ravichandran2, Katja Hauer2, Patrick Werni2, Leonhard Geist2, Jark Böttcher2, John. R. Engen3, Klaus Rumpel2, Matthias Samwer2, Mark Petronczki2 and Opher Gileadi1,* 1- Structural Genomics Consortium, University of Oxford, ORCRB, Roosevelt Drive, Oxford, United Kingdom. 2- Boehringer Ingelheim RCV GmbH & Co KG, Vienna, Austria. 3- Department of Chemistry and Chemical Biology, Northeastern University, Boston, MA 02115, USA. Abstract Werner syndrome helicase (WRN) plays important roles in DNA repair and the maintenance of genome integrity. Germline mutations in WRN give rise to Werner syndrome, a rare autosomal recessive progeroid syndrome that also features cancer predisposition. Interest in WRN as a therapeutic target has increased massively following the identification of WRN as the top synthetic lethal target for microsatellite instable (MSI) cancers. High throughput screens have identified candidate WRN helicase inhibitors, but the development of potent, selective inhibitors would be significantly enhanced by high-resolution structural information.. In this study we have further characterized the functions of WRN that are required for survival of MSI cancer cells, showing that ATP binding and hydrolysis are required for complementation of siRNA-mediated WRN silencing. A crystal structure of the WRN helicase core at 2.2 Å resolutionfeatures an atypical mode of nucleotide binding with extensive contacts formed by motif VI, which in turn defines the relative positioning of the two RecA like domains.
    [Show full text]
  • Roles of the Werner Syndrome Recq Helicase in DNA Replication
    dna repair 7 (2008) 1776–1786 available at www.sciencedirect.com journal homepage: www.elsevier.com/locate/dnarepair Mini-review Roles of the Werner syndrome RecQ helicase in DNA replication Julia M. Sidorova ∗ Department of Pathology, University of Washington, Seattle, WA 98195-7705, USA article info abstract Article history: Congenital deficiency in the WRN protein, a member of the human RecQ helicase family, Received 22 July 2008 gives rise to Werner syndrome, a genetic instability and cancer predisposition disorder with Accepted 23 July 2008 features of premature aging. Cellular roles of WRN are not fully elucidated. WRN has been Published on line 6 September 2008 implicated in telomere maintenance, homologous recombination, DNA repair, and other processes. Here I review the available data that directly address the role of WRN in preserv- Keywords: ing DNA integrity during replication and propose that WRN can function in coordinating Werner syndrome replication fork progression with replication stress-induced fork remodeling. I further dis- RecQ helicase cuss this role of WRN within the contexts of damage tolerance group of regulatory pathways, Human cell culture and redundancy and cooperation with other RecQ helicases. Replication stress Published by Elsevier B.V. Damage tolerance Contents 1. Introduction ................................................................................................................. 1777 1.1. Is S phase prolonged in WRN-deficient cells? ...................................................................... 1777 1.2. What is the mechanism of the S phase extension in the absence of WRN? ...................................... 1778 1.3. Are all forks equal when it comes to WRN? ........................................................................ 1779 1.4. A mechanistic model for WRN role in replication elongation ..................................................... 1779 1.5. WRN and damage tolerance pathways ............................................................................. 1781 1.6.
    [Show full text]
  • 1 Research Article 29 July 2015 Werner Syndrome Helicase
    bioRxiv preprint doi: https://doi.org/10.1101/023739; this version posted August 4, 2015. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 1 Research Article 2 29 July 2015 3 4 5 Werner syndrome helicase modulates G4 DNA-dependent transcription and opposes 6 mechanistically distinct senescence-associated gene expression programs 7 8 Weiliang Tang1*, Ana I. Robles2*, Richard P. Beyer3†, Lucas T. Gray4†I, Giang Huong Nguyen2I, 9 Junko Oshima1, Nancy Maizels1,4,5, Curtis C. Harris2 and Raymond J. Monnat, Jr.1,6 10 11 1Department of Pathology, University of Washington, Seattle, WA U.S.A.; 2Laboratory of Human 12 Carcinogenesis, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, 13 U.S.A; 3Center for Ecogenetics and Environmental Health, University of Washington, Seattle, 14 WA U.S.A.; 4Department of Immunology, University of Washington, Seattle, WA U.S.A.; 15 5Department of Biochemistry, University of WA, Seattle, WA U.S.A.; 6Department of Genome 16 Sciences, University of WA, Seattle, WA U.S.A. *,† these authors contributed equally. I current 17 address: Allen Institute for Brain Science, Seattle, WA (LTG) and Department of Dermatology, 18 University of Colorado Anschutz Medical College, Aurora, CO 80020 (GHN). 19 20 Corresponding authors: Ray Monnat MD, Departments of Pathology and Genome Sciences, 21 University of WA, Seattle, WA 98195-7705. Phone: +1.206.616.7392; fax: +1 206.543.3967; 22 email: [email protected] or Curtis C. Harris, MD, Chief, Laboratory of Human 23 Carcinogenesis, Building 37, National Cancer Institute, National Institutes of Health, Bethesda, 24 MD 20892.
    [Show full text]
  • WRN-Mutated Colorectal Cancer Is Characterized by a Distinct Genetic Phenotype
    cancers Article WRN-Mutated Colorectal Cancer Is Characterized by a Distinct Genetic Phenotype Kai Zimmer 1, Alberto Puccini 2 , Joanne Xiu 3, Yasmine Baca 3, Gilbert Spizzo 1,4, Heinz-Josef Lenz 2, Francesca Battaglin 2 , Richard M. Goldberg 5 , Axel Grothey 6, Anthony F. Shields 7, Mohamed E. Salem 8, John L. Marshall 9, W. Michael Korn 3, Dominik Wolf 1, Florian Kocher 1 and Andreas Seeber 1,* 1 Department of Hematology and Oncology, Comprehensive Cancer Center Innsbruck, Innsbruck Medical University, 6020 Innsbruck, Austria; [email protected] (K.Z.); [email protected] (G.S.); [email protected] (D.W.); fl[email protected] (F.K.) 2 Norris Comprehensive Cancer Center, Keck School of Medicine, University of Southern California, Los Angeles, CA 90033, USA; [email protected] (A.P.); [email protected] (H.-J.L.); [email protected] (F.B.) 3 Caris Life Sciences, Phoenix, AZ 85040, USA; [email protected] (J.X.); [email protected] (Y.B.); [email protected] (W.M.K.) 4 Department of Internal Medicine, Oncologic Day Hospital, Bressanone Hospital (SABES-ASDAA), 39042 Bressanone-Brixen, Italy 5 West Virginia University Cancer Institute, Morgantown, WV 26506, USA; [email protected] 6 West Cancer Center, Germantown, TN 38138, USA; [email protected] 7 Department of Oncology, Karmanos Cancer Institute, Wayne State University, Detroit, MI 48201, USA; [email protected] 8 Levine Cancer Institute, Charlotte, NC 28204, USA; [email protected] 9 Ruesch Center for the Cure of Gastrointestinal Cancers, Lombardi Comprehensive Cancer Center, Georgetown University Medical Center, Washington, DC 20057, USA; [email protected] * Correspondence: [email protected]; Tel.: +43-50504-23001 Received: 20 March 2020; Accepted: 19 May 2020; Published: 22 May 2020 Abstract: Werner syndrome gene (WRN) contributes to DNA repair.
    [Show full text]
  • A Study of Genomic Instability in Chronic Lymphocytic Leukaemia
    A Study of Genomic Instability in Chronic Lymphocytic Leukaemia (CLL) Thesis submitted in accordance with the requirements of the University of Liverpool for the degree of Doctor of Philosophy by Faris Jamal M Tayeb March, 2018 0 Abstract of thesis Chronic Lymphocytic Leukaemia (CLL) is a malignancy of mature B cells. The median age at diagnosis is 70-years old, mostly seen in Western Societies. Half of the patients show an indolent phenotype and watchful waiting is the recommended approach for their management. However, once treated, patients are heterogeneous in terms of response and relapse. Regarding prognosis, genetic testing, alongside current clinical staging, is important to guide treatment and prognosis. Deletion of the short arm of chromosome 17 (17p) is one of the worst prognostic markers for CLL and usually involves loss of heterozygosity (LOH) and mutations in the TP53 gene. P53 is one of the cell-cycle regulators that activates senescence, cell-cycle arrest, DNA repair or apoptosis as part of the DNA damage response (DDR). In some severe cases of CLL with inactivated P53, the DDR is affected in favour of CLL survival. However, there is a little knowledge regarding the relationship between TP53 and mutations affecting other DNA repair genes and whether these could lead to a synergistic effect. It was, therefore, the aim of this study to address this important question. Genomic DNA was extracted from blood CLL cells of 10 patients, all of whom were bearing mutation(s) in TP53 as identified with Sanger sequencing and had progressive disease at the time of sampling. 194 known human DNA maintenance genes were identified and biotinylated-cRNA probes designed (Agilent SureSelect) to enrich DNA from their exons (2786 regions - total size = 500kb) for sequencing using an Ion Torrent Personal Genome Machine (PGM).
    [Show full text]